View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9751_low_23 (Length: 413)
Name: NF9751_low_23
Description: NF9751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9751_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 19 - 401
Target Start/End: Original strand, 26484735 - 26485116
Alignment:
| Q |
19 |
gtagaaatttaaggttgtatcagctacatttgaccgtaattaaagcttatgagtcaacatttgaccgcgattatccacagtatcgcgaatcacaacacag |
118 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26484735 |
gtagaaatttaaggctgtatcagctacatttgaccgtaattaaagcttatgagtcaacatttgaccgcgattatccacagtatcgcgaatcacaacacag |
26484834 |
T |
|
| Q |
119 |
ccataaattattttagaatgcatgctgaaagtgctcctaaattatttcatctttacaggtgtttactcaaaattttcaaatgatgcaatcggaaatgtct |
218 |
Q |
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| T |
26484835 |
ccataaattattttagaatgcatgctgaa-gtgctcctaaattatttgatctttacaggtgtttactcaaaattttcaaatgatgcaatcggaaatgtct |
26484933 |
T |
|
| Q |
219 |
aaccctgcatatcttcaattcaattcagcacaacaacaagtttcatgttgtggtggattgataaacaatatggggatagttcctccggaaattggggttc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |
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| T |
26484934 |
aaccctgcatatcttcaattcaattcagcacaacaacaagtttcatgttgtggtggattgataaacaatatggggatactccctccggaaattggggttc |
26485033 |
T |
|
| Q |
319 |
gaaggaacattaatgcaccggcatctgcatctttacctgaaatctttctcgacccatcatgtttcactgtatgtttcctctct |
401 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26485034 |
gaaggaacattaatgcaccggcatctgcatctttacctgaaatctttctcgacccatcatgtttcactgtatgtttcctctct |
26485116 |
T |
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