View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9751_low_32 (Length: 352)

Name: NF9751_low_32
Description: NF9751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9751_low_32
NF9751_low_32
[»] chr6 (65 HSPs)
chr6 (17-279)||(6339047-6339312)
chr6 (17-279)||(6330341-6330604)
chr6 (49-245)||(6352801-6353013)
chr6 (280-352)||(9892943-9893015)
chr6 (279-352)||(23281765-23281838)
chr6 (280-352)||(12951688-12951760)
chr6 (280-352)||(20182125-20182197)
chr6 (280-352)||(22153794-22153866)
chr6 (280-352)||(22579436-22579508)
chr6 (280-352)||(25397982-25398054)
chr6 (280-352)||(27705402-27705474)
chr6 (280-352)||(28364891-28364963)
chr6 (277-352)||(18033612-18033687)
chr6 (281-352)||(21140920-21140991)
chr6 (279-352)||(2992594-2992667)
chr6 (295-352)||(22083833-22083890)
chr6 (279-352)||(27796921-27796994)
chr6 (280-352)||(6598444-6598516)
chr6 (280-352)||(12680271-12680343)
chr6 (280-352)||(15364545-15364617)
chr6 (281-352)||(12844984-12845055)
chr6 (278-352)||(24661096-24661170)
chr6 (275-352)||(495714-495791)
chr6 (275-352)||(12351673-12351750)
chr6 (295-348)||(14036615-14036668)
chr6 (279-348)||(18048767-18048836)
chr6 (280-352)||(14886541-14886613)
chr6 (296-352)||(21990261-21990317)
chr6 (280-352)||(26224408-26224480)
chr6 (281-348)||(343654-343721)
chr6 (294-352)||(11530219-11530277)
chr6 (295-352)||(26939582-26939639)
chr6 (280-352)||(2669289-2669361)
chr6 (280-352)||(11049838-11049910)
chr6 (280-348)||(16250893-16250960)
chr6 (280-352)||(18492349-18492421)
chr6 (278-349)||(33250798-33250869)
chr6 (295-349)||(12200689-12200743)
chr6 (295-349)||(22055702-22055756)
chr6 (295-352)||(1939329-1939386)
chr6 (295-352)||(5270387-5270444)
chr6 (295-352)||(21691583-21691640)
chr6 (280-352)||(17919516-17919588)
chr6 (278-352)||(6978257-6978329)
chr6 (310-352)||(15448395-15448437)
chr6 (295-352)||(12160933-12160990)
chr6 (279-352)||(19175864-19175936)
chr6 (279-348)||(30834051-30834120)
chr6 (295-347)||(9885238-9885290)
chr6 (314-352)||(5192276-5192314)
chr6 (314-352)||(14872133-14872171)
chr6 (282-347)||(3619635-3619700)
chr6 (295-352)||(11431727-11431784)
chr6 (296-349)||(13668084-13668137)
chr6 (314-352)||(6605583-6605621)
chr6 (314-352)||(11077663-11077701)
chr6 (314-352)||(12499230-12499268)
chr6 (314-352)||(12506559-12506597)
chr6 (314-352)||(12509633-12509671)
chr6 (314-352)||(13145016-13145054)
chr6 (314-352)||(20692898-20692936)
chr6 (319-352)||(12205272-12205305)
chr6 (314-351)||(15961495-15961532)
chr6 (295-352)||(16118141-16118198)
chr6 (284-328)||(33636964-33637008)
[»] chr3 (76 HSPs)
chr3 (279-352)||(8543445-8543517)
chr3 (279-352)||(17582388-17582461)
chr3 (280-352)||(7623618-7623690)
chr3 (280-352)||(9652554-9652626)
chr3 (280-352)||(18539780-18539852)
chr3 (280-352)||(26830529-26830601)
chr3 (280-352)||(27449064-27449136)
chr3 (280-352)||(28389949-28390021)
chr3 (278-349)||(29215966-29216037)
chr3 (294-352)||(11007770-11007828)
chr3 (295-352)||(4393437-4393494)
chr3 (279-352)||(16299836-16299909)
chr3 (295-352)||(49915442-49915499)
chr3 (280-352)||(1628191-1628263)
chr3 (280-352)||(30219314-30219386)
chr3 (277-352)||(17762615-17762690)
chr3 (277-352)||(19063935-19064010)
chr3 (295-352)||(8110330-8110387)
chr3 (295-352)||(11915749-11915806)
chr3 (295-352)||(18104617-18104674)
chr3 (295-352)||(19269951-19270008)
chr3 (279-347)||(15490010-15490078)
chr3 (296-352)||(25882562-25882618)
chr3 (280-352)||(29704119-29704191)
chr3 (280-352)||(36543725-36543797)
chr3 (277-352)||(5260910-5260985)
chr3 (278-352)||(18091634-18091709)
chr3 (301-352)||(19610335-19610386)
chr3 (278-352)||(23217295-23217369)
chr3 (295-352)||(8428162-8428219)
chr3 (295-352)||(11085429-11085486)
chr3 (299-352)||(11219133-11219186)
chr3 (279-352)||(18379999-18380072)
chr3 (295-352)||(27212868-27212925)
chr3 (295-348)||(27968906-27968959)
chr3 (295-352)||(29451085-29451142)
chr3 (300-352)||(19223445-19223497)
chr3 (300-352)||(19545506-19545558)
chr3 (280-352)||(26390721-26390793)
chr3 (280-352)||(29956348-29956420)
chr3 (280-352)||(30005503-30005575)
chr3 (280-352)||(36564526-36564598)
chr3 (301-352)||(1311046-1311097)
chr3 (278-352)||(11837301-11837375)
chr3 (295-348)||(20615434-20615487)
chr3 (295-352)||(31433728-31433785)
chr3 (281-348)||(31250065-31250132)
chr3 (310-352)||(13921331-13921373)
chr3 (310-352)||(29236050-29236092)
chr3 (310-352)||(35579612-35579654)
chr3 (294-348)||(46942478-46942531)
chr3 (310-352)||(48404866-48404908)
chr3 (295-352)||(21020056-21020113)
chr3 (300-352)||(10803716-10803768)
chr3 (304-351)||(26963337-26963384)
chr3 (314-352)||(3461397-3461435)
chr3 (314-352)||(13905125-13905163)
chr3 (295-349)||(20088391-20088445)
chr3 (310-352)||(21088758-21088800)
chr3 (310-352)||(21816727-21816769)
chr3 (314-352)||(23773487-23773525)
chr3 (314-352)||(26098823-26098861)
chr3 (278-352)||(27182743-27182817)
chr3 (310-352)||(28859597-28859639)
chr3 (314-347)||(5565732-5565765)
chr3 (317-352)||(6718723-6718758)
chr3 (314-352)||(1745574-1745612)
chr3 (314-352)||(5744426-5744464)
chr3 (314-352)||(5781385-5781423)
chr3 (310-352)||(10772141-10772183)
chr3 (280-349)||(10941755-10941827)
chr3 (314-352)||(15064079-15064117)
chr3 (314-352)||(50665723-50665761)
chr3 (314-351)||(6088316-6088353)
chr3 (314-347)||(46012820-46012853)
chr3 (324-352)||(8546265-8546293)
[»] scaffold0184 (1 HSPs)
scaffold0184 (280-348)||(7436-7504)
[»] chr7 (53 HSPs)
chr7 (280-352)||(23577276-23577348)
chr7 (278-352)||(20429443-20429517)
chr7 (279-352)||(24605817-24605890)
chr7 (279-352)||(37135372-37135445)
chr7 (280-352)||(10050923-10050995)
chr7 (280-352)||(20174000-20174072)
chr7 (280-352)||(22486374-22486446)
chr7 (280-352)||(31425598-31425670)
chr7 (280-352)||(39979711-39979783)
chr7 (278-352)||(40847522-40847596)
chr7 (279-352)||(11036487-11036559)
chr7 (295-352)||(22501589-22501646)
chr7 (279-352)||(36636485-36636558)
chr7 (280-352)||(15014492-15014564)
chr7 (280-352)||(27805998-27806070)
chr7 (280-352)||(38057612-38057684)
chr7 (277-352)||(816278-816353)
chr7 (295-352)||(28800873-28800930)
chr7 (295-352)||(47523737-47523794)
chr7 (280-352)||(23232019-23232091)
chr7 (290-352)||(7733399-7733461)
chr7 (295-348)||(20924049-20924102)
chr7 (295-348)||(31042246-31042299)
chr7 (295-352)||(42926507-42926564)
chr7 (280-352)||(1907335-1907407)
chr7 (300-352)||(9698625-9698677)
chr7 (300-352)||(21917421-21917473)
chr7 (300-352)||(23750823-23750875)
chr7 (300-352)||(45664768-45664820)
chr7 (277-352)||(18217807-18217881)
chr7 (278-348)||(687855-687925)
chr7 (278-352)||(36993798-36993872)
chr7 (295-352)||(2457665-2457722)
chr7 (295-352)||(24140445-24140502)
chr7 (295-352)||(48933131-48933188)
chr7 (304-352)||(1842898-1842946)
chr7 (280-352)||(15969766-15969836)
chr7 (295-348)||(23699916-23699969)
chr7 (280-341)||(27130314-27130375)
chr7 (295-348)||(32267342-32267395)
chr7 (300-352)||(6849298-6849350)
chr7 (295-347)||(25777204-25777256)
chr7 (280-352)||(33427670-33427742)
chr7 (310-349)||(21623031-21623070)
chr7 (314-352)||(3904565-3904603)
chr7 (278-352)||(26415402-26415476)
chr7 (316-352)||(23539248-23539284)
chr7 (314-352)||(2093449-2093487)
chr7 (318-352)||(2650915-2650949)
chr7 (314-352)||(3872274-3872312)
chr7 (314-352)||(26577279-26577317)
chr7 (295-348)||(10222720-10222773)
chr7 (295-336)||(21871567-21871608)
[»] chr1 (66 HSPs)
chr1 (280-352)||(15243065-15243137)
chr1 (277-352)||(12161791-12161866)
chr1 (278-352)||(52183656-52183730)
chr1 (279-352)||(23457876-23457949)
chr1 (279-352)||(41071922-41071995)
chr1 (280-352)||(22158782-22158854)
chr1 (277-352)||(12720786-12720861)
chr1 (273-351)||(20408248-20408326)
chr1 (279-352)||(6459196-6459269)
chr1 (295-352)||(9464098-9464155)
chr1 (279-352)||(14760846-14760919)
chr1 (279-352)||(22603527-22603600)
chr1 (279-352)||(45839271-45839344)
chr1 (280-352)||(9110062-9110134)
chr1 (280-351)||(18890637-18890708)
chr1 (277-352)||(29549395-29549470)
chr1 (278-352)||(41752411-41752485)
chr1 (279-352)||(9259270-9259343)
chr1 (295-352)||(13523048-13523105)
chr1 (280-349)||(38531260-38531329)
chr1 (279-352)||(50845417-50845490)
chr1 (280-352)||(6412140-6412212)
chr1 (280-352)||(7181642-7181714)
chr1 (280-352)||(7830011-7830083)
chr1 (279-351)||(16913665-16913736)
chr1 (280-352)||(18894987-18895059)
chr1 (295-349)||(17661045-17661099)
chr1 (279-349)||(46865222-46865292)
chr1 (295-352)||(9985414-9985471)
chr1 (279-352)||(12370028-12370101)
chr1 (295-352)||(14486719-14486776)
chr1 (295-348)||(19081723-19081776)
chr1 (295-348)||(19129611-19129664)
chr1 (280-348)||(22789682-22789750)
chr1 (295-349)||(17734044-17734098)
chr1 (275-348)||(12989827-12989900)
chr1 (295-352)||(13102311-13102368)
chr1 (279-352)||(20290407-20290480)
chr1 (295-347)||(20580904-20580956)
chr1 (310-352)||(4340417-4340459)
chr1 (302-352)||(12174853-12174903)
chr1 (300-350)||(32046876-32046926)
chr1 (310-352)||(41120824-41120866)
chr1 (278-352)||(46339532-46339606)
chr1 (310-352)||(46786045-46786087)
chr1 (295-352)||(16258573-16258630)
chr1 (295-352)||(26825235-26825292)
chr1 (280-349)||(29093644-29093713)
chr1 (295-352)||(41063192-41063249)
chr1 (279-352)||(51973403-51973476)
chr1 (280-348)||(13195563-13195631)
chr1 (280-352)||(48522498-48522570)
chr1 (296-352)||(50092385-50092441)
chr1 (314-352)||(19865258-19865296)
chr1 (310-348)||(30673504-30673542)
chr1 (295-352)||(11917781-11917838)
chr1 (280-336)||(13295039-13295095)
chr1 (280-352)||(17200097-17200169)
chr1 (295-347)||(18788002-18788054)
chr1 (314-349)||(28229545-28229580)
chr1 (314-352)||(8941081-8941119)
chr1 (306-344)||(39040860-39040898)
chr1 (314-352)||(46790014-46790052)
chr1 (295-349)||(52621149-52621203)
chr1 (295-348)||(30928469-30928522)
chr1 (295-351)||(6775882-6775938)
[»] chr5 (52 HSPs)
chr5 (277-352)||(23975612-23975687)
chr5 (278-352)||(33818648-33818722)
chr5 (280-352)||(27428099-27428171)
chr5 (278-352)||(15060951-15061025)
chr5 (290-352)||(23423843-23423905)
chr5 (279-352)||(36196373-36196446)
chr5 (280-352)||(8886938-8887010)
chr5 (280-352)||(12045707-12045779)
chr5 (280-352)||(13974165-13974237)
chr5 (280-352)||(16121926-16121998)
chr5 (278-352)||(17039718-17039792)
chr5 (282-352)||(20959490-20959560)
chr5 (279-349)||(36831980-36832050)
chr5 (295-352)||(618289-618346)
chr5 (280-352)||(2472801-2472873)
chr5 (280-352)||(7888777-7888849)
chr5 (280-348)||(13620218-13620286)
chr5 (300-352)||(23408980-23409032)
chr5 (278-352)||(17986707-17986781)
chr5 (283-352)||(5982628-5982697)
chr5 (295-352)||(11927873-11927930)
chr5 (295-352)||(12328313-12328370)
chr5 (279-352)||(33816845-33816918)
chr5 (280-349)||(36716290-36716359)
chr5 (280-352)||(18413536-18413608)
chr5 (280-352)||(25652670-25652742)
chr5 (280-352)||(29727933-29728005)
chr5 (280-352)||(35620430-35620502)
chr5 (277-352)||(22649416-22649491)
chr5 (295-352)||(8108947-8109004)
chr5 (295-352)||(17079400-17079457)
chr5 (295-352)||(25673315-25673372)
chr5 (295-352)||(28265562-28265619)
chr5 (280-347)||(3080788-3080855)
chr5 (278-352)||(7003817-7003888)
chr5 (314-352)||(746955-746993)
chr5 (294-347)||(10420344-10420397)
chr5 (296-352)||(32726813-32726869)
chr5 (314-352)||(10494751-10494789)
chr5 (310-352)||(24138928-24138970)
chr5 (314-352)||(25397875-25397913)
chr5 (310-352)||(26708672-26708714)
chr5 (310-352)||(26978406-26978448)
chr5 (314-352)||(40484058-40484096)
chr5 (295-348)||(17036503-17036556)
chr5 (279-348)||(20188032-20188101)
chr5 (295-351)||(31158641-31158697)
chr5 (314-349)||(38837761-38837796)
chr5 (314-352)||(4125275-4125313)
chr5 (314-352)||(16631961-16631999)
chr5 (278-336)||(19891028-19891086)
chr5 (295-348)||(16472272-16472325)
[»] chr8 (53 HSPs)
chr8 (278-352)||(17103952-17104026)
chr8 (280-352)||(3823111-3823183)
chr8 (284-352)||(17824703-17824771)
chr8 (280-352)||(4330956-4331028)
chr8 (278-350)||(6816472-6816544)
chr8 (278-352)||(21350454-21350528)
chr8 (279-352)||(17810275-17810348)
chr8 (279-352)||(27910851-27910924)
chr8 (279-352)||(27957270-27957343)
chr8 (279-352)||(29345048-29345121)
chr8 (280-352)||(4647842-4647914)
chr8 (280-352)||(5879182-5879254)
chr8 (280-352)||(6817032-6817104)
chr8 (280-352)||(19240845-19240917)
chr8 (280-352)||(19314029-19314101)
chr8 (280-352)||(29350901-29350973)
chr8 (280-352)||(32961637-32961709)
chr8 (280-352)||(37992077-37992149)
chr8 (280-352)||(40289508-40289579)
chr8 (295-346)||(9915133-9915184)
chr8 (280-347)||(18844636-18844703)
chr8 (297-352)||(43431646-43431701)
chr8 (295-352)||(18010147-18010204)
chr8 (280-352)||(16062026-16062098)
chr8 (280-352)||(22939291-22939363)
chr8 (280-352)||(24193283-24193355)
chr8 (280-352)||(27869216-27869288)
chr8 (280-352)||(33652545-33652617)
chr8 (295-352)||(24576111-24576168)
chr8 (279-352)||(25651055-25651128)
chr8 (300-352)||(8555391-8555443)
chr8 (280-348)||(15251581-15251648)
chr8 (310-352)||(5670256-5670298)
chr8 (310-352)||(11938753-11938795)
chr8 (310-352)||(19256220-19256262)
chr8 (310-352)||(24636660-24636702)
chr8 (314-352)||(26399094-26399132)
chr8 (314-352)||(32247921-32247959)
chr8 (299-352)||(31344259-31344312)
chr8 (278-349)||(9631380-9631450)
chr8 (295-349)||(3692261-3692315)
chr8 (310-352)||(25000518-25000560)
chr8 (314-352)||(31399595-31399633)
chr8 (314-352)||(33413057-33413095)
chr8 (281-349)||(21219330-21219396)
chr8 (317-348)||(25655949-25655980)
chr8 (310-349)||(30467044-30467083)
chr8 (314-348)||(13061022-13061056)
chr8 (314-348)||(25273418-25273452)
chr8 (297-351)||(29473388-29473442)
chr8 (310-352)||(30687944-30687986)
chr8 (299-348)||(6103846-6103895)
chr8 (279-348)||(24479889-24479958)
[»] chr4 (50 HSPs)
chr4 (279-348)||(22128403-22128472)
chr4 (280-352)||(5399587-5399659)
chr4 (280-352)||(25147699-25147771)
chr4 (280-352)||(46286316-46286388)
chr4 (280-352)||(55309300-55309372)
chr4 (295-352)||(18051832-18051889)
chr4 (295-352)||(18744157-18744214)
chr4 (280-352)||(27040112-27040184)
chr4 (280-352)||(33914037-33914109)
chr4 (280-352)||(37378710-37378782)
chr4 (280-352)||(37761929-37762001)
chr4 (281-352)||(22156688-22156759)
chr4 (295-352)||(2275765-2275822)
chr4 (279-352)||(30568086-30568159)
chr4 (295-352)||(36689670-36689727)
chr4 (280-348)||(8878861-8878929)
chr4 (280-352)||(19680511-19680583)
chr4 (280-352)||(19839157-19839229)
chr4 (300-352)||(32175824-32175876)
chr4 (300-352)||(45532666-45532718)
chr4 (278-352)||(30269075-30269149)
chr4 (278-352)||(30283040-30283114)
chr4 (280-352)||(12071940-12072012)
chr4 (300-352)||(13565002-13565054)
chr4 (295-350)||(22168261-22168316)
chr4 (295-352)||(1638440-1638497)
chr4 (295-348)||(9913251-9913304)
chr4 (300-352)||(5473847-5473899)
chr4 (279-347)||(16915346-16915414)
chr4 (310-352)||(4586845-4586887)
chr4 (314-352)||(9239368-9239406)
chr4 (310-352)||(13028903-13028945)
chr4 (280-349)||(24682417-24682484)
chr4 (314-352)||(29625337-29625375)
chr4 (295-348)||(38223503-38223556)
chr4 (280-352)||(3612973-3613045)
chr4 (314-352)||(14944758-14944796)
chr4 (310-352)||(25026565-25026607)
chr4 (314-352)||(38619859-38619897)
chr4 (295-341)||(39234935-39234981)
chr4 (310-352)||(45091282-45091324)
chr4 (317-352)||(9059039-9059074)
chr4 (314-352)||(4606916-4606954)
chr4 (314-352)||(9670566-9670604)
chr4 (314-352)||(12105995-12106033)
chr4 (310-352)||(18714910-18714952)
chr4 (314-352)||(30507999-30508037)
chr4 (314-352)||(38645762-38645800)
chr4 (295-348)||(25225092-25225145)
chr4 (280-352)||(44783460-44783533)
[»] chr2 (49 HSPs)
chr2 (279-352)||(28262339-28262412)
chr2 (280-352)||(30783314-30783386)
chr2 (280-352)||(32185808-32185880)
chr2 (280-352)||(37724079-37724151)
chr2 (281-352)||(23388465-23388535)
chr2 (282-352)||(31266332-31266402)
chr2 (279-348)||(1141511-1141580)
chr2 (295-352)||(8430287-8430344)
chr2 (295-352)||(32300442-32300499)
chr2 (280-352)||(15636822-15636894)
chr2 (280-348)||(27058407-27058475)
chr2 (280-352)||(27522987-27523059)
chr2 (280-352)||(41637594-41637666)
chr2 (279-348)||(20065165-20065234)
chr2 (295-352)||(21293798-21293855)
chr2 (279-352)||(28841429-28841502)
chr2 (280-352)||(29749490-29749562)
chr2 (278-352)||(14757208-14757282)
chr2 (295-352)||(18551340-18551397)
chr2 (295-352)||(22140451-22140508)
chr2 (295-352)||(27327607-27327664)
chr2 (279-352)||(41736147-41736220)
chr2 (280-352)||(13613180-13613252)
chr2 (280-352)||(13788142-13788214)
chr2 (295-347)||(22192183-22192235)
chr2 (280-352)||(29998646-29998718)
chr2 (300-352)||(32008948-32009000)
chr2 (305-352)||(28319666-28319713)
chr2 (295-349)||(44366087-44366141)
chr2 (295-348)||(18916491-18916544)
chr2 (295-352)||(26687778-26687835)
chr2 (279-352)||(37802465-37802538)
chr2 (280-348)||(40018778-40018846)
chr2 (296-347)||(18609506-18609557)
chr2 (295-349)||(9004398-9004452)
chr2 (280-341)||(36373876-36373937)
chr2 (295-347)||(9590461-9590513)
chr2 (295-347)||(16098996-16099048)
chr2 (294-352)||(8763624-8763682)
chr2 (310-352)||(37552233-37552275)
chr2 (314-352)||(43408598-43408636)
chr2 (302-352)||(44722930-44722980)
chr2 (295-352)||(2556086-2556143)
chr2 (279-352)||(24117316-24117389)
chr2 (310-352)||(12779606-12779648)
chr2 (310-352)||(23858044-23858086)
chr2 (314-347)||(7093578-7093611)
chr2 (294-347)||(13134712-13134765)
chr2 (312-349)||(36550844-36550881)
[»] scaffold0058 (1 HSPs)
scaffold0058 (280-352)||(74628-74700)
[»] scaffold0047 (1 HSPs)
scaffold0047 (280-352)||(58562-58634)
[»] scaffold0219 (1 HSPs)
scaffold0219 (278-352)||(19581-19655)
[»] scaffold0069 (1 HSPs)
scaffold0069 (278-352)||(10136-10210)
[»] scaffold0001 (3 HSPs)
scaffold0001 (278-352)||(84281-84355)
scaffold0001 (295-352)||(8197-8254)
scaffold0001 (295-352)||(21929-21986)
[»] scaffold0603 (1 HSPs)
scaffold0603 (280-349)||(6069-6138)
[»] scaffold0576 (1 HSPs)
scaffold0576 (280-352)||(9316-9388)
[»] scaffold0087 (1 HSPs)
scaffold0087 (280-352)||(37874-37946)
[»] scaffold0161 (1 HSPs)
scaffold0161 (278-352)||(6773-6847)
[»] scaffold0007 (3 HSPs)
scaffold0007 (278-352)||(276221-276295)
scaffold0007 (294-352)||(202768-202826)
scaffold0007 (304-352)||(3746-3794)
[»] scaffold0717 (1 HSPs)
scaffold0717 (295-352)||(1006-1063)
[»] scaffold0599 (1 HSPs)
scaffold0599 (295-352)||(7500-7557)
[»] scaffold0009 (2 HSPs)
scaffold0009 (278-351)||(219614-219687)
scaffold0009 (314-351)||(215744-215781)
[»] scaffold0108 (1 HSPs)
scaffold0108 (280-352)||(12633-12704)
[»] scaffold0023 (1 HSPs)
scaffold0023 (280-352)||(39790-39862)
[»] scaffold0076 (1 HSPs)
scaffold0076 (300-352)||(26483-26535)
[»] scaffold0024 (1 HSPs)
scaffold0024 (281-352)||(112309-112380)
[»] scaffold0006 (2 HSPs)
scaffold0006 (302-352)||(121074-121124)
scaffold0006 (314-349)||(84764-84799)
[»] scaffold0502 (1 HSPs)
scaffold0502 (280-348)||(10872-10940)
[»] scaffold0655 (1 HSPs)
scaffold0655 (279-348)||(3253-3320)
[»] scaffold0240 (1 HSPs)
scaffold0240 (310-352)||(15077-15119)
[»] scaffold0019 (1 HSPs)
scaffold0019 (294-352)||(173438-173496)
[»] scaffold0014 (1 HSPs)
scaffold0014 (310-352)||(22221-22263)
[»] scaffold0062 (1 HSPs)
scaffold0062 (298-351)||(43915-43968)
[»] scaffold0035 (1 HSPs)
scaffold0035 (280-348)||(74808-74877)
[»] scaffold0128 (1 HSPs)
scaffold0128 (310-352)||(10750-10792)
[»] scaffold0002 (1 HSPs)
scaffold0002 (314-352)||(439977-440015)


Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 6339047 - 6339312
Alignment:
Q  17 taggtaaaggaagatgagta----agagtggtaggtgctaaattgtagggaagagtatggacatgagttataaaaggtaacatgatagtttgcaaataca 112  Q
    ||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6339047 taggtaaaggaagatgagtaagtaagagtggtaggtgctaaattgtagggaagagtatggacatgaattataaaaggtaacatgatagtttgcaaataca 6339146  T
Q  113 cgtagatatgacatagatacttaaagtagagtatgcatgtaacatgttattaaattcaagataatattgccatcatcttgattaagtcaattctacaata 212  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6339147 cgtagatatgacatggatacttaaattagagtatgcatgtaacatgttattaaattcaagatcatattgccatcatcttgattaagtcaattctacaata 6339246  T
Q  213 ttaatatgttcatatcttaccaactataaccgcaatagatctcggagattcctttctattctaaaat 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  6339247 ttaatatgttcatatcttaccaactataaccgcaatagatctcggaggttcctttc-attctaaaat 6339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 6330341 - 6330604
Alignment:
Q  17 taggtaaaggaagatgagtaagagtggta----ggtgctaaattgtagggaagagtatggacatgagttataaaaggtaacatgatagtttgcaaataca 112  Q
    |||||||||||||||||||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6330341 taggtaaaggaagatgagtaagagtggtaggtaggtgctaaattgtaggggagagtatggacatgagttataaaaggtaacatgatagtttgcaaataca 6330440  T
Q  113 cgtagatatgacatagatacttaaagtagagtatgcatgtaacatgttattaaattcaagataatattgccatcatcttgattaagtcaattctacaata 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||     
T  6330441 cgtagatatgacatagatacttaaagtagagtatgcatgtaacatgttattaaattcaagataatactgccatcatcttgattcagtcaattctacaatt 6330540  T
Q  213 ttaatatgttcatatcttaccaactataaccgcaatagatctcggagattcctttctattctaaaat 279  Q
    |||||   |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  6330541 ttaat---ttcatatcttaccaactataaccgcaatagatccaggagattcctttctattctaaaat 6330604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 6352801 - 6353013
Alignment:
Q  49 gctaaattgtagggaagagtatggacatgagttataaaaggtaacatgatagtttgcaaatacacgtagatatgacatagatacttaaagtagagtatgc 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||||||  | ||| |||||| ||||||||||    
T  6352801 gctaaattgtagggaagagtatggacatgagttataaaaggtaacatgatgttttcaaaatacacgtagatatgatgtggatccttaaattagagtatgc 6352900  T
Q  149 atgtaacatgttattaaattcaagataatattg----------ccatcatc------ttgattaagtcaattctacaatattaatatgttcatatcttac 232  Q
     |||| || | |||||| |||||||| ||||||          ||||||||      |||||| ||||||||||||| | |||||||||||||||| |||    
T  6352901 gtgtatcaaggtattaatttcaagatgatattgctgagttggtccatcatcatcaaattgatttagtcaattctacacttttaatatgttcatatcatac 6353000  T
Q  233 caactataaccgc 245  Q
    || ||||||||||    
T  6353001 cagctataaccgc 6353013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 9892943 - 9893015
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9892943 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 9893015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 23281765 - 23281838
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23281765 tcactactaaaaaattaaaaattagggagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 23281838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 12951688 - 12951760
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12951688 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 12951760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 20182125 - 20182197
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  20182125 cactactaaaaaatcaaaaattagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 20182197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 22153866 - 22153794
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  22153866 cactactaaaaaatcaaaaattagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 22153794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 22579508 - 22579436
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22579508 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 22579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 25397982 - 25398054
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25397982 cactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 25398054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 27705402 - 27705474
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27705402 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 27705474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 28364891 - 28364963
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28364891 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 28364963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 18033687 - 18033612
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||  |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  18033687 aatcactactaaaaaaacaaaaattagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtc 18033612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 21140920 - 21140991
Alignment:
Q  281 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21140920 actactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 21140991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 2992594 - 2992667
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  2992594 tcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 2992667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 22083833 - 22083890
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22083833 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 22083890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 27796994 - 27796921
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  27796994 tcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 27796921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 6598444 - 6598516
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  6598444 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtc 6598516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 12680343 - 12680271
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| ||| ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  12680343 cactactaaaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtc 12680271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 15364617 - 15364545
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  15364617 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtc 15364545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 12844984 - 12845055
Alignment:
Q  281 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  12844984 actactaaaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtc 12845055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 24661170 - 24661096
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  24661170 atcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtc 24661096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 352
Target Start/End: Complemental strand, 495791 - 495714
Alignment:
Q  275 aaaatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| |||   ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  495791 aaaatcactactaaaaaaactaaatttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtc 495714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 352
Target Start/End: Complemental strand, 12351750 - 12351673
Alignment:
Q  275 aaaatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| ||||||||| |||  ||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||    
T  12351750 aaaaacactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtc 12351673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 14036615 - 14036668
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14036615 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattc 14036668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 18048767 - 18048836
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  18048767 tcactactaaaaaacaaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattc 18048836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 14886541 - 14886613
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||    
T  14886541 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtc 14886613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 21990317 - 21990261
Alignment:
Q  296 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  21990317 aaaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 21990261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 26224408 - 26224480
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  26224408 cactactaaaaaaacaaaaattagcgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 26224480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 348
Target Start/End: Complemental strand, 343721 - 343654
Alignment:
Q  281 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||| |||  |||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  343721 actactaaaaaaataaaaattagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattc 343654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 11530219 - 11530277
Alignment:
Q  294 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  11530219 aaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtc 11530277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 26939582 - 26939639
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  26939582 aaaaattagtgagagatatttagtgagggaaaacatgaaatccctctctaattccgtc 26939639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 2669289 - 2669361
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||    
T  2669289 cactactaaaaaaacaaaaattagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtc 2669361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 11049910 - 11049838
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||    
T  11049910 cactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtc 11049838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 16250960 - 16250893
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||| ||||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  16250960 cactactaaaaaataaaaa-ttagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattc 16250893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 18492349 - 18492421
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||| ||||||| || ||||||||||||||||||| |||||||||||||    
T  18492349 cactactaaaaaaacaaaaattagtgagagaaattttgtaagggaaaacgtgaaatcccactctaattccgtc 18492421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 278 - 349
Target Start/End: Complemental strand, 33250869 - 33250798
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||| |||  ||||||||||||| || ||||||||||||||||| |||||| |||||||||||||    
T  33250869 atcactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaattcctctctaattcc 33250798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 12200689 - 12200743
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  12200689 aaaaattagtgagggatatttagtgagggaaaatatgaaatccctctctaattcc 12200743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 22055756 - 22055702
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  22055756 aaaaattagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattcc 22055702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 1939386 - 1939329
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  1939386 aaaaattagtgagggatattcagtgagagaaaacatgaaatccctctctaattccgtc 1939329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 5270387 - 5270444
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||    
T  5270387 aaaaattagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtc 5270444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 21691640 - 21691583
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||    
T  21691640 aaaaattagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtc 21691583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 17919516 - 17919588
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||| || |||||||||  || |||||||||||||||||||||    
T  17919516 cactactaaaaaaacaaaaattagtgagggaaatgtaatgagggaaactgtaaaatccctctctaattccgtc 17919588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 6978257 - 6978329
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  |||||||||||||||| |||||||||  |||||| |||||| ||||||||||||||||    
T  6978257 atcactactaaaaaaacaaaaattagtgagggatatttagtga--gaaaacatgaaattcctctctaattccgtc 6978329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 15448395 - 15448437
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 15448437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 12160990 - 12160933
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| | ||||||||||||||||| | |||||||||||||||| ||||    
T  12160990 aaaaattagtgaggaatatttagtgagggaaaacataaaatccctctctaatttcgtc 12160933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 19175936 - 19175864
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||||||||| |||||||||| |||||||||||| || |||| ||||||||||||||||    
T  19175936 tcactactaaaaaaacaaaaattagagagggaaatt-agtgagggaaaatgtaaaattcctctctaattccgtc 19175864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 30834120 - 30834051
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||| |||   ||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  30834120 tcactactaaaaaaactaaatttagtgaaggaaatttagtgagggagaacgtaaaatccctctctaattc 30834051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 9885238 - 9885290
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||| |||||    
T  9885238 aaaaattagtgacgaaaatttagtgagggaaaacatgaaatccctctttaatt 9885290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 5192314 - 5192276
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  5192314 ttagtgagggaaaacgtaaaatccctctctaattccgtc 5192276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 14872133 - 14872171
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  14872133 ttagtgagggaaaacatgaaatccctctctaattccgtc 14872171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 3619700 - 3619635
Alignment:
Q  282 ctactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||||| |||||||||| |||  |||||||| || | ||||||| ||||||||||||||||    
T  3619700 ctactaataaagaaaaaattagcgagaaaaatttagagatgaaaaacgttaaatccctctctaatt 3619635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 11431784 - 11431727
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| |||||||||||||||||| |||| |||||| || |||||||| ||||||||||    
T  11431784 aaaatttagtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtc 11431727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 13668137 - 13668084
Alignment:
Q  296 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    |||||| |||| |||||||||| ||||||||||||||||| || ||||||||||    
T  13668137 aaaattggtgaaggaaatttagagagggaaaacgtgaaattcccctctaattcc 13668084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 6605621 - 6605583
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  6605621 ttagtgagggaaaacatgaaatctctctctaattccgtc 6605583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 11077663 - 11077701
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  11077663 ttagtgagggaaaacatgaaatccctctctaataccgtc 11077701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 12499230 - 12499268
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  12499230 ttagtgagggaaaacgtaaaatccctctctaactccgtc 12499268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 12506559 - 12506597
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  12506559 ttagtgagggaaaacgtaaaatccctctctaactccgtc 12506597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 12509671 - 12509633
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  12509671 ttagtgagggaaaacgtaaaatccctctctaactccgtc 12509633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 13145016 - 13145054
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  13145016 ttagtgagggaaaacgtgaaatctctctttaattccgtc 13145054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 20692936 - 20692898
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  20692936 ttagtgagggaaaacgtaaaatccctctctaatttcgtc 20692898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 352
Target Start/End: Complemental strand, 12205305 - 12205272
Alignment:
Q  319 gagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||| |||||||||||    
T  12205305 gagggaaaacgtgaaatccctcactaattccgtc 12205272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 351
Target Start/End: Complemental strand, 15961532 - 15961495
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  15961532 ttagtgagggaaaacgtaaaattcctctctaattccgt 15961495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 16118141 - 16118198
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||  ||||||| ||||||| ||| ||||||| |||||||||| ||||    
T  16118141 aaaaattagtgagaaaaatttaatgagggagaacatgaaatctctctctaatttcgtc 16118198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 33636964 - 33637008
Alignment:
Q  284 actaataaataaaaaattagtgagggaaatttagtgagggaaaac 328  Q
    ||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  33636964 actaaaaaaaaaataattagtgagggaagtttagtgagggaaaac 33637008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 8543445 - 8543517
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8543445 tcactactaataaa-aaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 8543517  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 17582461 - 17582388
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17582461 tcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 17582388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 7623690 - 7623618
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  7623690 cactactaaaaaatcaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtc 7623618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 9652554 - 9652626
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9652554 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 9652626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 18539780 - 18539852
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18539780 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 18539852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 26830601 - 26830529
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26830601 cactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtc 26830529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 27449064 - 27449136
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27449064 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 27449136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 28389949 - 28390021
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28389949 cactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtc 28390021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 278 - 349
Target Start/End: Original strand, 29215966 - 29216037
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29215966 atcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattcc 29216037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 294 - 352
Target Start/End: Complemental strand, 11007828 - 11007770
Alignment:
Q  294 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11007828 aaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 11007770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 4393494 - 4393437
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4393494 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 4393437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 16299836 - 16299909
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  16299836 tcactactaaaaaaacaaaaattagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtc 16299909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 49915442 - 49915499
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49915442 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 49915499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 1628191 - 1628263
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  1628191 cactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtc 1628263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 30219314 - 30219386
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  30219314 cactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtc 30219386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 17762615 - 17762690
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||  |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  17762615 aatcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtc 17762690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 19063935 - 19064010
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||  |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  19063935 aatcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtc 19064010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 8110330 - 8110387
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  8110330 aaaaattagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtc 8110387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 11915749 - 11915806
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11915749 aaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 11915806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 18104674 - 18104617
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  18104674 aaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtc 18104617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 19270008 - 19269951
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  19270008 aaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtc 19269951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 15490010 - 15490078
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    |||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  15490010 tcactactaaaaaaataaaaattagtgagggaaatttagtgagagaaaacgtgaaatccctctttaatt 15490078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 25882562 - 25882618
Alignment:
Q  296 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  25882562 aaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 25882618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 29704191 - 29704119
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||    
T  29704191 cactactaaaaaaacaaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtc 29704119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 36543725 - 36543797
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  36543725 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtc 36543797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 5260910 - 5260985
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||   ||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  5260910 aatcactactaaaaaaactaaatttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtc 5260985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 18091709 - 18091634
Alignment:
Q  278 atcactactaataaata-aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| ||| | |||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||    
T  18091709 atcactactaaaaaaaacaaaaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtc 18091634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 19610335 - 19610386
Alignment:
Q  301 tagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19610335 tagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 19610386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 23217369 - 23217295
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||| ||| |||  ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  23217369 atcactaataaaaaagcaaaaattggtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtc 23217295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 8428162 - 8428219
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  8428162 aaaaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtc 8428219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 11085486 - 11085429
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  11085486 aaaaattagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtc 11085429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 299 - 352
Target Start/End: Original strand, 11219133 - 11219186
Alignment:
Q  299 attagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  11219133 attagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 11219186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 18379999 - 18380072
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||    
T  18379999 tcactactaaaaaaacaaaaattagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtc 18380072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 27212925 - 27212868
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||    
T  27212925 aaaaattagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtc 27212868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 27968906 - 27968959
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  27968906 aaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattc 27968959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 29451085 - 29451142
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  29451085 aaaaattagcgagagaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 29451142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 19223445 - 19223497
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtc 19223497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 19545506 - 19545558
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtc 19545558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 26390793 - 26390721
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| |||| |||||||| ||| |||||||||||||||||||||||    
T  26390793 cactactaaaaaaacaaaaattagtgagggatattttgtgagggataacatgaaatccctctctaattccgtc 26390721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 29956348 - 29956420
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  29956348 cactactaaaaaaacaaaaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtc 29956420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 30005503 - 30005575
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  30005503 cactactaaaaaaacaaaaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtc 30005575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 36564598 - 36564526
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||| | |||||||||||||||||| ||||    
T  36564598 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtc 36564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 301 - 352
Target Start/End: Complemental strand, 1311097 - 1311046
Alignment:
Q  301 tagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  1311097 tagtgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtc 1311046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 11837375 - 11837301
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| ||| | ||||||| ||||||| | ||||||||||||||| |||||| ||||||||||||||||    
T  11837375 atcactactaaaaaaaataaaattaatgagggatacttagtgagggaaaacatgaaattcctctctaattccgtc 11837301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 20615487 - 20615434
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  20615487 aaaaattagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattc 20615434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 31433728 - 31433785
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||    
T  31433728 aaaaattagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtc 31433785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 31250065 - 31250132
Alignment:
Q  281 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||| ||| |||||||| ||||||||||||||| ||||||||||   |||||||||||||||||    
T  31250065 actactaaaaaagaaaaaatttgtgagggaaatttagagagggaaaacacaaaatccctctctaattc 31250132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 13921331 - 13921373
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  13921331 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 13921373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 29236050 - 29236092
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 29236092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 35579654 - 35579612
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 35579612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 46942478 - 46942531
Alignment:
Q  294 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  46942478 aaaaaatt-gtgagggaattttagagagggaaaacgtgaaatccctctctaattc 46942531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 48404866 - 48404908
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 48404908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 21020056 - 21020113
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| | |||||||||||||||| | |||||| ||||||||||||||    
T  21020056 aaaaattagtgagggcagtttagtgagggaaaacataaaatccttctctaattccgtc 21020113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 10803716 - 10803768
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| |||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  10803716 ttagcgagggaaatttagtgagggaaaacgtaaaattcctctttaattccgtc 10803768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 351
Target Start/End: Complemental strand, 26963384 - 26963337
Alignment:
Q  304 tgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||    
T  26963384 tgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgt 26963337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 3461435 - 3461397
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  3461435 ttagtgagggaaaacgtaaaatccctctctaattccgtc 3461397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 13905163 - 13905125
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  13905163 ttagtgagggaaaacgtaaaatccctctctaattccgtc 13905125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 20088391 - 20088445
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    |||||| |||||| |||||||||||||| ||||| |||||||| |||||||||||    
T  20088391 aaaaatcagtgagagaaatttagtgaggcaaaacatgaaatccttctctaattcc 20088445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 21088758 - 21088800
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  21088758 aaatttagtgagggaaaacatgaaatccctctcgaattccgtc 21088800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 21816727 - 21816769
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtc 21816769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 23773487 - 23773525
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  23773487 ttagtgagggaaaacgtaaaatccctctctaattccgtc 23773525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 26098823 - 26098861
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  26098823 ttagtgagggaaaacatgaaatccctctctaattccgtc 26098861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 27182817 - 27182743
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| |||||| |||  |||||| |||||| ||||||||||||||||||||  |||||| |||||||||| ||||    
T  27182817 atcagtactaaaaaaacaaaaatgagtgagagaaatttagtgagggaaaacaagaaatctctctctaatttcgtc 27182743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 28859597 - 28859639
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||| ||||||| |||||||||||||||||||||    
T  28859597 aaatttagtgaggtaaaacgtaaaatccctctctaattccgtc 28859639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 314 - 347
Target Start/End: Original strand, 5565732 - 5565765
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||||||||||||||||||||||||||||    
T  5565732 ttagtgagggaaaacgtgaaatccctctctaatt 5565765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 352
Target Start/End: Original strand, 6718723 - 6718758
Alignment:
Q  317 gtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||| ||||||||||||    
T  6718723 gtgagggaaaacgtgaaatccctttctaattccgtc 6718758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 1745612 - 1745574
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  1745612 ttagtgagggaaaacgtaaaatctctctctaattccgtc 1745574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 5744426 - 5744464
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  5744426 ttagtgagggaaaacatgaaatctctctctaattccgtc 5744464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 5781385 - 5781423
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  5781385 ttagtgagggaaaacatgaaatctctctctaattccgtc 5781423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 10772183 - 10772141
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||  |||||||||||||||||| ||||    
T  10772183 aaatttagtgagggaaaatatgaaatccctctctaatttcgtc 10772141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 10941827 - 10941755
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaa---atttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||| |||  |||||||||| |||||    ||||| ||||||||||| ||||||||||||||||||||    
T  10941827 cactactaaaaaaacaaaaattagtaagggatcatatttaatgagggaaaacatgaaatccctctctaattcc 10941755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 15064117 - 15064079
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  15064117 ttagtgagggaaaacatgaaatctctctctaattccgtc 15064079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 50665761 - 50665723
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  50665761 ttagtgagggaaaacatgaaatccctctctaatttcgtc 50665723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 351
Target Start/End: Complemental strand, 6088353 - 6088316
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  6088353 ttagtgagggaaaacgtaaaatccatctctaattccgt 6088316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 347
Target Start/End: Complemental strand, 46012853 - 46012820
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||||||||| ||||||||||||||||||    
T  46012853 ttagtgagggaaaacatgaaatccctctctaatt 46012820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 8546265 - 8546293
Alignment:
Q  324 aaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtc 8546293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 7436 - 7504
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7436 cactactaaaaaataaaaaattaatgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 7504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 23577348 - 23577276
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23577348 cactactaaaaaattaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtc 23577276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 20429443 - 20429517
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20429443 atcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 20429517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 24605817 - 24605890
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  24605817 tcactactaaaaaatcaaaaattagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtc 24605890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 37135445 - 37135372
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37135445 tcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 37135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 10050995 - 10050923
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10050995 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 10050923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 20174000 - 20174072
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20174000 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 20174072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 22486374 - 22486446
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22486374 cactactaaaaaaacaaaaattagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtc 22486446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 31425670 - 31425598
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31425670 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 31425598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 39979783 - 39979711
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39979783 cactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 39979711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 40847596 - 40847522
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||| |||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40847596 atcactgctaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 40847522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 11036487 - 11036559
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11036487 tcactactaaaaaa-acaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 11036559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 22501589 - 22501646
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22501589 aaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtc 22501646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 36636485 - 36636558
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  36636485 tcactactaaaaaaacaaaaattagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtc 36636558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 15014564 - 15014492
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  15014564 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 15014492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 27805998 - 27806070
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  27805998 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 27806070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 38057612 - 38057684
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  38057612 cactactaaaaaatcaaaaattaatgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtc 38057684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 816353 - 816278
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||  |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  816353 aatcactactaaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtc 816278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 28800873 - 28800930
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  28800873 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 28800930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 47523794 - 47523737
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  47523794 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 47523737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 23232019 - 23232091
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  23232019 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtc 23232091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 7733461 - 7733399
Alignment:
Q  290 aaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  7733461 aaatcaaaaattagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtc 7733399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 20924102 - 20924049
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  20924102 aaaaattagtgatggaaatttagtgagggaaaacatgaaatccctctctaattc 20924049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 31042246 - 31042299
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  31042246 aaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattc 31042299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 42926564 - 42926507
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  42926564 aaaaattagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtc 42926507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 1907335 - 1907407
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||    
T  1907335 cactactaaaaaaacaaaaattagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtc 1907407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 9698677 - 9698625
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  9698677 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtc 9698625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 21917473 - 21917421
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  21917473 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtc 21917421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 23750875 - 23750823
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtc 23750823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 45664768 - 45664820
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtc 45664820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 18217807 - 18217881
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||| |||  ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  18217807 aatcactactaaaaaattaaat-ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtc 18217881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 687855 - 687925
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||| |||  ||||||||||||| ||||||||||||||||||| || |||||| ||||||||||    
T  687855 atcactactaaaaaaacaaaaattagtgagagaaatttagtgagggaaaatgtaaaatccttctctaattc 687925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 36993798 - 36993872
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  |||||||||||| ||||||||||||||| ||||| ||||||| || ||||||||||||    
T  36993798 atcactactaaaaaaacaaaaattagtgaaggaaatttagtgaggaaaaacatgaaatctctttctaattccgtc 36993872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 2457665 - 2457722
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||| |||||||||    
T  2457665 aaaaattagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtc 2457722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 24140445 - 24140502
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||| | |||||| |||| |||||||||    
T  24140445 aaaaattagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtc 24140502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 48933131 - 48933188
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||    
T  48933131 aaaaattagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtc 48933188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 304 - 352
Target Start/End: Original strand, 1842898 - 1842946
Alignment:
Q  304 tgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtc 1842946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 15969766 - 15969836
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||  | ||||||||||||||||| |||||| ||||||||||||||||    
T  15969766 cactactaaaaaaacaaaaattagtgag--atatttagtgagggaaaacatgaaattcctctctaattccgtc 15969836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 23699969 - 23699916
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||    
T  23699969 aaaaattagtgagagaaattttgtgagggaaaatgtgaaatccctctttaattc 23699916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 27130314 - 27130375
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctct 341  Q
    ||||||||| |||  |||||||| |||||||||||||| ||||||||| |||||||||||||    
T  27130314 cactactaaaaaagtaaaaattaatgagggaaatttagagagggaaaatgtgaaatccctct 27130375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 32267342 - 32267395
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  32267342 aaaaatttgtgagggaaatttagagagggaaaacgcaaaatccctctctaattc 32267395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 6849350 - 6849298
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| |||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  6849350 ttagcgagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtc 6849298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 25777256 - 25777204
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    |||| ||| |||||||||||||| |||||||||||||||||| ||||||||||    
T  25777256 aaaatttaatgagggaaatttagagagggaaaacgtgaaatcactctctaatt 25777204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 33427670 - 33427742
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||| | ||||| | ||||||||||||||| |||||| ||||||||||||||||    
T  33427670 cactactaaaaaaacaaaaattaataagggatacttagtgagggaaaacatgaaattcctctctaattccgtc 33427742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 310 - 349
Target Start/End: Original strand, 21623031 - 21623070
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattcc 21623070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 3904603 - 3904565
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  3904603 ttagtgagggaaaacgtaaaatccctctctaattccgtc 3904565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 26415402 - 26415476
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||| |||| |||  ||||||||||||||||| ||||| |||| ||||||| |||||||||| ||||| ||||    
T  26415402 atcactgctaaaaaagcaaaaattagtgagggaattttagagaggaaaaacgtaaaatccctctttaatttcgtc 26415476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 352
Target Start/End: Original strand, 23539248 - 23539284
Alignment:
Q  316 agtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| ||||||||||||||||||||||||||    
T  23539248 agtgagggaatacgtgaaatccctctctaattccgtc 23539284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 2093487 - 2093449
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  2093487 ttagtgagggaaaacgtcaaatctctctctaattccgtc 2093449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 352
Target Start/End: Complemental strand, 2650949 - 2650915
Alignment:
Q  318 tgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||| |||||||||||||||||||||    
T  2650949 tgagggaaaacgtaaaatccctctctaattccgtc 2650915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 3872312 - 3872274
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  3872312 ttagtgagggaaaacgtaaaatctctctctaattccgtc 3872274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 26577279 - 26577317
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  26577279 ttagtgagggaaaacatgaaatccctctctaataccgtc 26577317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 10222773 - 10222720
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||||||  |||||||| ||  |||||||| |||||||||||||||||    
T  10222773 aaaaattagtgagaaaaatttagagaaagaaaacgtaaaatccctctctaattc 10222720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 21871567 - 21871608
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatc 336  Q
    |||||||||||||| |||||||||||||||||| || |||||    
T  21871567 aaaaattagtgaggaaaatttagtgagggaaaatgtaaaatc 21871608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 15243065 - 15243137
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15243065 cactactaaaaaatcaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtc 15243137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 12161791 - 12161866
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12161791 aatcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 12161866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 52183656 - 52183730
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52183656 atcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 52183730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 23457876 - 23457949
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23457876 tcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 23457949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 41071995 - 41071922
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41071995 tcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 41071922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 22158782 - 22158854
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22158782 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 22158854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 12720786 - 12720861
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  12720786 aatcactactaaaaaaataaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 12720861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 273 - 351
Target Start/End: Complemental strand, 20408326 - 20408248
Alignment:
Q  273 ctaaaatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    ||||| |||||||||  |||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20408326 ctaaagtcactactataaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgt 20408248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 6459196 - 6459269
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  6459196 tcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 6459269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 9464098 - 9464155
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9464098 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 9464155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 14760846 - 14760919
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  14760846 tcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtc 14760919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 22603527 - 22603600
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  22603527 tcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtc 22603600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 45839271 - 45839344
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  45839271 tcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 45839344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 9110134 - 9110062
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  9110134 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 9110062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 280 - 351
Target Start/End: Complemental strand, 18890708 - 18890637
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    ||||||||| |||  ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  18890708 cactactaaaaaaataaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgt 18890637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 29549395 - 29549470
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||   ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29549395 aatcactactaaaaaaactaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 29549470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 41752411 - 41752485
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| | |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  41752411 atcactactgaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 41752485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 9259343 - 9259270
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  9259343 tcactactaaaaaaacaaatattagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtc 9259270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 13523105 - 13523048
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  13523105 aaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtc 13523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 38531329 - 38531260
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||| |||  ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  38531329 cactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattcc 38531260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 50845490 - 50845417
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  50845490 tcactactaaaaaaacaaaaattagtgtggaaaatttagtgagggaaaacatgaaatccctctctaattccgtc 50845417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 6412212 - 6412140
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  6412212 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtc 6412140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 7181714 - 7181642
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  7181714 cactactaaaaaaataaatattagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtc 7181642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 7830011 - 7830083
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  7830011 cactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtc 7830083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 16913736 - 16913665
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    |||||||||| ||| | |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  16913736 tcactactaaaaaa-acaaaattagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgt 16913665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 18895059 - 18894987
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  18895059 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtc 18894987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 17661045 - 17661099
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  17661045 aaaaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattcc 17661099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 46865222 - 46865292
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    |||||||||| |||  |||||||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  46865222 tcactactaaaaaagcaaaaattagtgagggaaattcagagagggagaacgtgaaatccctctctaattcc 46865292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 9985471 - 9985414
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  9985471 aaaaattagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtc 9985414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 12370101 - 12370028
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||||||||||| ||||||||| | |||||| ||||||||||||||    
T  12370101 tcactactaaaaaaacaaaaattagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtc 12370028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 14486776 - 14486719
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  14486776 aaaaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtc 14486719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 19081723 - 19081776
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  19081723 aaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattc 19081776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 19129611 - 19129664
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  19129611 aaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattc 19129664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 22789750 - 22789682
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||| |||  ||||||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  22789750 cactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctatctaattc 22789682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 17734098 - 17734044
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  17734098 aaaaattagtgagggaaatttagtgagggaaaacatgaaatctctcgctaattcc 17734044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 12989827 - 12989900
Alignment:
Q  275 aaaatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||| ||||| |||  ||||||||||||||||||||| | |||||||||||||||||| ||| |||||||    
T  12989827 aaaatcacaactaaaaaagcaaaaattagtgagggaaattttgagagggaaaacgtgaaatctctccctaattc 12989900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 13102311 - 13102368
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||    
T  13102311 aaaaattagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtc 13102368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 20290480 - 20290407
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||||||||||||| ||||||| ||||| ||||||||||||||  ||||||||||||||    
T  20290480 tcactactaaaaaaacaaaaattagtgagagaaattttgtgagagaaaacgtgaaatcattctctaattccgtc 20290407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 20580904 - 20580956
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  20580904 aaaaattagtgagagaattttagagagggaaaacgtgaaatccctctctaatt 20580956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 4340417 - 4340459
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 4340459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 12174903 - 12174853
Alignment:
Q  302 agtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  12174903 agtgagggatatttagtgagggaaaacatgaaatccttctctaattccgtc 12174853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 32046876 - 32046926
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccg 350  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  32046876 ttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccg 32046926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 41120866 - 41120824
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 41120824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 46339606 - 46339532
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  ||||| || ||||||| ||||||| ||||||||| ||||||| |||||||||||||||    
T  46339606 atcactactaaaaaaacaaaaactaatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtc 46339532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 46786087 - 46786045
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 46786045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 16258630 - 16258573
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| |||||||| |||| ||||||||||| |||||| ||||||||||    
T  16258630 aaaaattagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtc 16258573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 26825235 - 26825292
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||  |||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  26825235 aaaaattagcaagggaattttagagagggaaaacgtgaaattcctctctaattccgtc 26825292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 29093713 - 29093644
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||| |||  ||||||||||||||||||||||| || |||||| || |||| |||||||||||||    
T  29093713 cactactaaaaaagtaaaaattagtgagggaaatttagagatggaaaatgtaaaattcctctctaattcc 29093644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 41063192 - 41063249
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| ||||||||||||| ||||| | ||||| |||||||||||||||    
T  41063192 aaaaattagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtc 41063249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 51973403 - 51973476
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||| |||| |||||||||||| ||||||||||| |||||||  |||||||||||||||    
T  51973403 tcactactaaaaaaacaaatattaatgagggaaattttgtgagggaaaatgtgaaatttctctctaattccgtc 51973476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 13195563 - 13195631
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||| |||  ||||||| ||||||||||||||| ||||||||| |  |||||||||||||||||    
T  13195563 cactactaaaaaagcaaaaatttgtgagggaaatttagagagggaaaatgcaaaatccctctctaattc 13195631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 48522498 - 48522570
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| || |||||||||||||| |||||| |||||  |||||||||    
T  48522498 cactactaaaaaaataaaaattagtgagggatatgtagtgagggaaaacatgaaattcctcttaaattccgtc 48522570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 50092441 - 50092385
Alignment:
Q  296 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| ||| ||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  50092441 aaaaatagggagagaaattttgtgagggaaaacatgaaatccctctctaattccgtc 50092385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 19865258 - 19865296
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  19865258 ttagtgagggaaaacatgaaatccctctctaattccgtc 19865296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 30673504 - 30673542
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  30673504 aaatttagtgagggaaaacatgaaatccctctctaattc 30673542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 11917781 - 11917838
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||  || ||||| ||||||||||||||| ||||| ||||||||||||    
T  11917781 aaaaattagtgagataagtttagagagggaaaacgtgaactccctttctaattccgtc 11917838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 13295095 - 13295039
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatc 336  Q
    ||||||||| |||  |||||||||| | |||||||||| ||||||||||||||||||    
T  13295095 cactactaaaaaagcaaaaattagtaacggaaatttagagagggaaaacgtgaaatc 13295039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 17200169 - 17200097
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||  | |||| | ||| ||||||||||    
T  17200169 cactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtc 17200097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 18788054 - 18788002
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||||||||||||||||  |||||||||||||| |||  |||||||||    
T  18788054 aaaaattagtgagggaaatttaaagagggaaaacgtgacatcaatctctaatt 18788002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 349
Target Start/End: Complemental strand, 28229580 - 28229545
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||| ||||||||||||||||||    
T  28229580 ttagtgagggaaaacgtaaaatccctctctaattcc 28229545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 8941119 - 8941081
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  8941119 ttagtgagggaaaacgtaaaattcctctctaattccgtc 8941081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 39040860 - 39040898
Alignment:
Q  306 agggaaatttagtgagggaaaacgtgaaatccctctcta 344  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  39040860 agggaattttagagagggaaaacgtgaaatccctctcta 39040898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 46790014 - 46790052
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  46790014 ttagtgagggaaaacgtaaaatccctttctaattccgtc 46790052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 52621149 - 52621203
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    |||||||||||||| ||||||||||||| ||||| |||||| | || ||||||||    
T  52621149 aaaaattagtgaggaaaatttagtgaggaaaaacatgaaattcttcactaattcc 52621203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 30928522 - 30928469
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||||||| ||||||| |||| |||||| ||||||  |||||||||||    
T  30928522 aaaaattagtgaggaaaatttactgagtgaaaacatgaaatttctctctaattc 30928469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 351
Target Start/End: Original strand, 6775882 - 6775938
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    |||||||| |||| |||||||||||||  ||||| | |||| |||||||||||||||    
T  6775882 aaaaattaatgagagaaatttagtgagaaaaaacttaaaattcctctctaattccgt 6775938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 23975612 - 23975687
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23975612 aatcactactaaaaaaataaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 23975687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 33818722 - 33818648
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33818722 atcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 33818648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 27428171 - 27428099
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| ||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  27428171 cactactaaaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtc 27428099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 15060951 - 15061025
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  15060951 atcactactaaaaaaacaaaaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtc 15061025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 23423905 - 23423843
Alignment:
Q  290 aaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  23423905 aaataaaaaattagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtc 23423843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 36196373 - 36196446
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  36196373 tcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtc 36196446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 8887010 - 8886938
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  8887010 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtc 8886938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 12045707 - 12045779
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  12045707 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtc 12045779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 13974237 - 13974165
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  13974237 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtc 13974165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 16121998 - 16121926
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  16121998 cactactaaaaaaccaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 16121926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 17039792 - 17039718
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||   ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17039792 atcactactaaaaaaactaaatttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtc 17039718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 20959490 - 20959560
Alignment:
Q  282 ctactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||| |||  ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  20959490 ctactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtc 20959560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 349
Target Start/End: Complemental strand, 36832050 - 36831980
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  36832050 tcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattcc 36831980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 618289 - 618346
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  618289 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 618346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 2472873 - 2472801
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  2472873 cactactaaaaaaacaaaaattaatgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 2472801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 7888777 - 7888849
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  7888777 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtc 7888849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 13620286 - 13620218
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  13620286 cactactaaaaaaataaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattc 13620218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 23408980 - 23409032
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23408980 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 23409032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 17986707 - 17986781
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||||    
T  17986707 atcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtc 17986781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 5982628 - 5982697
Alignment:
Q  283 tactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||| |||| |||||||| ||||| ||||||||||||||||||| | |||||||||||||||||||||    
T  5982628 tactaaaaaatcaaaaattaatgaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtc 5982697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 11927930 - 11927873
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  11927930 aaaaattagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtc 11927873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 12328370 - 12328313
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  12328370 aaaaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtc 12328313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 33816918 - 33816845
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  33816918 tcactactaaaaaaacaaaagttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtc 33816845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 36716359 - 36716290
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||| |||  |||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  36716359 cactactaaaaaaacaaaaattagtgaggaaaattttgtgagggaaaacgtgaaatccttctctaattcc 36716290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 18413536 - 18413608
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||    
T  18413536 cactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaattccctttttaattccgtc 18413608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 25652742 - 25652670
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||| || ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  25652742 cactactaaaaaaacaaaatttggtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtc 25652670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 29728005 - 29727933
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||    
T  29728005 cactactaaaaaaacaaaaattagtgaggcaaattttgcgagggaaaacgtgaaattcctctctaattccgtc 29727933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 35620502 - 35620430
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  35620502 cactactaaaaaaacaaaaattaatgagggatatttagtgagggaaaacatgaaatccttctctaattccgtc 35620430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 22649491 - 22649416
Alignment:
Q  277 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||| |||||| |||  |||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  22649491 aatcattactaaaaaaataaaaattaatgagagaaatttagagagggaaaacgtgaaatccttctctaattccgtc 22649416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 8109004 - 8108947
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||||    
T  8109004 aaaaattagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtc 8108947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 17079400 - 17079457
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||  ||||||||| | |||||||||||||||||||||    
T  17079400 aaaaattagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtc 17079457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 25673372 - 25673315
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| |||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  25673372 aaaatttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtc 25673315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 28265619 - 28265562
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||| |||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  28265619 aaaaattaatgagggaaattttgtgagggaagacgtaaaatccctctctaattccgtc 28265562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 3080855 - 3080788
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||| |||  |||||||||||| | ||||||||||||||||||| ||||||||||||| ||||    
T  3080855 cactactaaaaaaacaaaaattagtgaagaaaatttagtgagggaaaacatgaaatccctctcaaatt 3080788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 7003888 - 7003817
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| ||| ||| | |||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  7003888 atcactactaaaaaacaaata-ttagtgagggaaattttgtgagggaaaacgtgaaat--ctctctaattccgtc 7003817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 746993 - 746955
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||||||||    
T  746993 ttagtgagggaaaacgtgaaatccctctctaattccgtc 746955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 10420397 - 10420344
Alignment:
Q  294 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||||||||| || ||||| |||||||||| ||||||||||||||||||    
T  10420397 aaaaaattagtgaggaaattttagagagggaaaacatgaaatccctctctaatt 10420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 32726869 - 32726813
Alignment:
Q  296 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||||||||| ||||||||| |||||||  |||||||||||||||    
T  32726869 aaaattagtgaaggaaatttagagagggaaaatgtgaaatttctctctaattccgtc 32726813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 10494751 - 10494789
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  10494751 ttagtgagggaaaacgtaaaatccctctctaattccgtc 10494789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 24138970 - 24138928
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| ||||| |||||||||||||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtc 24138928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 25397913 - 25397875
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  25397913 ttagtgagggaaaacatgaaatccctctctaattccgtc 25397875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 26708714 - 26708672
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtc 26708672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 26978448 - 26978406
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtc 26978406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 40484058 - 40484096
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  40484058 ttagtgagggaaaacgtaaaatccctctctaattccgtc 40484096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 17036556 - 17036503
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||| ||||||| ||||||| |||||||||||  |||||||||||||||||    
T  17036556 aaaaatttgtgagggtaatttagagagggaaaacgcaaaatccctctctaattc 17036503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 20188101 - 20188032
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||| |||  |||||||||||||  |||||||||||| ||||||||  |||| |||||||||||    
T  20188101 tcactactaaaaaaataaaaattagtgagaaaaatttagtgagagaaaacgtagaatcactctctaattc 20188032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 31158697 - 31158641
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    |||||| |||||||||||||||| || | |||||||||||| |||| ||||||||||    
T  31158697 aaaaataagtgagggaaatttagagaagaaaaacgtgaaattcctccctaattccgt 31158641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 349
Target Start/End: Complemental strand, 38837796 - 38837761
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||| ||||||||||||||||||    
T  38837796 ttagtgagggaaaacgtaaaatccctctctaattcc 38837761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 4125313 - 4125275
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  4125313 ttagtgagggaaaatgtgaaatctctctctaattccgtc 4125275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 16631999 - 16631961
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  16631999 ttagtgaaggaaaacgtaaaatccctctctaattccgtc 16631961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 19891086 - 19891028
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatc 336  Q
    ||||||||||| |||  ||||||| |||||||||| |||||||||||||| || |||||    
T  19891086 atcactactaaaaaaacaaaaattggtgagggaaagttagtgagggaaaatgtaaaatc 19891028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 16472325 - 16472272
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||||| |||||||||| |||| |||| ||| |||| |||||||||||    
T  16472325 aaaaattagtgacggaaatttagagaggaaaaaagtggaatcgctctctaattc 16472272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 17104026 - 17103952
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17104026 atcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 17103952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 3823111 - 3823183
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3823111 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 3823183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 17824771 - 17824703
Alignment:
Q  284 actaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17824771 actactaaaaaaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 17824703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 4330956 - 4331028
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  4330956 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtc 4331028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 278 - 350
Target Start/End: Complemental strand, 6816544 - 6816472
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccg 350  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  6816544 atcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccg 6816472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 21350454 - 21350528
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  21350454 atcactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtc 21350528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 17810275 - 17810348
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  17810275 tcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtc 17810348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 27910924 - 27910851
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  27910924 tcactactaaaaaaacaaaaattagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtc 27910851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 27957343 - 27957270
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  27957343 tcactactaaaaaaacaaaaattagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtc 27957270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 29345048 - 29345121
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||  ||| |||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  29345048 tcactactagaaaagaaaaaatttgtgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtc 29345121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 4647914 - 4647842
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  4647914 cactactaaaaaaacaaaaattagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtc 4647842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 5879182 - 5879254
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  5879182 cactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtc 5879254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 6817032 - 6817104
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||    
T  6817032 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtc 6817104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 19240845 - 19240917
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  19240845 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtc 19240917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 19314029 - 19314101
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  19314029 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtc 19314101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 29350901 - 29350973
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  29350901 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtc 29350973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 32961637 - 32961709
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||    
T  32961637 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtc 32961709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 37992077 - 37992149
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  37992077 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtc 37992149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 40289579 - 40289508
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  40289579 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtc 40289508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 9915184 - 9915133
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaat 346  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9915184 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaat 9915133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 18844703 - 18844636
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||| |||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  18844703 cactactaaaaaaataaaaattagtgagggaaatttagtgaaggaaaacatgaaatccctctctaatt 18844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 43431701 - 43431646
Alignment:
Q  297 aaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  43431701 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtc 43431646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 18010204 - 18010147
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  18010204 aaaaattagtgagggatatttattgagggaaaacatgaaatccctctctaattccgtc 18010147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 16062098 - 16062026
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||    
T  16062098 cactactaaaaaaataaaaattagtgagggaaattttttgaggaaaaacgtgaaatcactctctaattccgtc 16062026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 22939291 - 22939363
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||    
T  22939291 cactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtc 22939363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 24193355 - 24193283
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||    
T  24193355 cactactaaaaaaacaaaaattagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtc 24193283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 27869216 - 27869288
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||    
T  27869216 cactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtc 27869288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 33652545 - 33652617
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||    
T  33652545 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtc 33652617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 24576168 - 24576111
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| |||||| |||||||||| ||||||| |||||||||||||||    
T  24576168 aaaaattagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtc 24576111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 25651055 - 25651128
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||||||||||||||||| |||||||| ||||||||| || || |||||||||||||||    
T  25651055 tcactactaaaaaaataaaaattagtgagggaagtttagtgaaggaaaacgtaaagtctctctctaattccgtc 25651128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 8555443 - 8555391
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  8555443 ttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtc 8555391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 15251581 - 15251648
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||| |||| |||||||||||||| |||||||  ||||||||||||||||||| ||||||||||    
T  15251581 cactactaaaaaatcaaaaattagtgagg-aaatttaaagagggaaaacgtgaaatccttctctaattc 15251648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 5670298 - 5670256
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 5670256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 11938753 - 11938795
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 11938795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 19256220 - 19256262
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 19256262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 24636660 - 24636702
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 24636702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 26399132 - 26399094
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26399132 ttagtgagggaaaacgtgaaatccctctctaattccgtc 26399094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 32247921 - 32247959
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32247921 ttagtgagggaaaacgtgaaatccctctctaattccgtc 32247959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 31344312 - 31344259
Alignment:
Q  299 attagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||    
T  31344312 attagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtc 31344259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 349
Target Start/End: Original strand, 9631380 - 9631450
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||| ||| ||||| |||| ||||||||||| |||| ||||||||||||||  ||||||||||||    
T  9631380 atcactactaaaaaacaaaaa-ttagcgagggaaattttgtgaaggaaaacgtgaaatttctctctaattcc 9631450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 3692315 - 3692261
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||||||||  |||| ||||||| |||||| |||||||||||    
T  3692315 aaaaattagtgagggaaatttatagaggtaaaacgtaaaatccttctctaattcc 3692261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 25000560 - 25000518
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtc 25000518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 31399633 - 31399595
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  31399633 ttagtgagggaaaacgtgaaatccatctctaattccgtc 31399595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 33413095 - 33413057
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtc 33413057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 21219396 - 21219330
Alignment:
Q  281 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    |||||||  |||| ||||||||||||||||||||||  |||| || |||||||||||||||||||||||    
T  21219396 actactagaaaatcaaaaattagtgagggaaatttac-gagg-aatacgtgaaatccctctctaattcc 21219330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 348
Target Start/End: Complemental strand, 25655980 - 25655949
Alignment:
Q  317 gtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||||||||||||||||||||||    
T  25655980 gtgagggaaaacgtgaaatccctctctaattc 25655949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 349
Target Start/End: Complemental strand, 30467083 - 30467044
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattcc 30467044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 348
Target Start/End: Complemental strand, 13061056 - 13061022
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||||| |||||||||||||||||||    
T  13061056 ttagtgagggaaaacatgaaatccctctctaattc 13061022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 348
Target Start/End: Complemental strand, 25273452 - 25273418
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||||||| |||||||||||||||||    
T  25273452 ttagtgagggaaaacgtaaaatccctctctaattc 25273418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 29473442 - 29473388
Alignment:
Q  297 aaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    |||||| |||||||||| |||  |||||||||||||||||| ||||| |||||||    
T  29473442 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgt 29473388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 30687944 - 30687986
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||||| || |||||||||||||||||||||    
T  30687944 aaatttagtgaaggaaaatgtaaaatccctctctaattccgtc 30687986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 348
Target Start/End: Complemental strand, 6103895 - 6103846
Alignment:
Q  299 attagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||||||||| |||| ||||| ||||||  |||||||||||    
T  6103895 attagtgagggaaatttagagaggaaaaacatgaaatttctctctaattc 6103846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 24479958 - 24479889
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||| |||  |||||||||||||    |||||| || |||||||||||||| ||||||||||||    
T  24479958 tcactactaaaaaagcaaaaattagtgagaattatttagagaaggaaaacgtgaaattcctctctaattc 24479889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 22128472 - 22128403
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22128472 tcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 22128403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 5399587 - 5399659
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5399587 cactactaacaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 5399659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 25147699 - 25147771
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25147699 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 25147771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 46286388 - 46286316
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46286388 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 46286316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 55309372 - 55309300
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  55309372 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 55309300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 18051832 - 18051889
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18051832 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 18051889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 18744214 - 18744157
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18744214 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 18744157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 27040184 - 27040112
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27040184 cactactaaaaaaacaaatattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 27040112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 33914037 - 33914109
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  33914037 cactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtc 33914109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 37378782 - 37378710
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  37378782 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtc 37378710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 37762001 - 37761929
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37762001 cactactaaaaaatcaaaaaataatgaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 37761929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 281 - 352
Target Start/End: Complemental strand, 22156759 - 22156688
Alignment:
Q  281 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  22156759 actactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 22156688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 2275822 - 2275765
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  2275822 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 2275765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 30568159 - 30568086
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||| |||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||    
T  30568159 tcactactaaaaaatcaaaaattagtgaaggaaattttgtgagggaaaacgtaaaatctctctctaattccgtc 30568086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 36689670 - 36689727
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36689670 aaaaattagcgagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtc 36689727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 8878861 - 8878929
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  8878861 cactactaaaaaaacaaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattc 8878929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 19680583 - 19680511
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||    
T  19680583 cactactaaaaaaacaaaaattaatgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtc 19680511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 19839157 - 19839229
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||    
T  19839157 cactactaaaaaaacaaaaattagcgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 19839229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 32175876 - 32175824
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 32175824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 45532718 - 45532666
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 45532666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 30269149 - 30269075
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  ||||||||||||||||||||||| ||||||||| || ||||| |||||||||||||||    
T  30269149 atcactactaaaaaaacaaaaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtc 30269075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 30283040 - 30283114
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  ||||||||||||||||||||||| ||||||||| || ||||| |||||||||||||||    
T  30283040 atcactactaaaaaaacaaaaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtc 30283114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 12071940 - 12072012
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||| ||||||| | |||||||||||||||||||||    
T  12071940 cactactaaaaaaagaaaaattagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtc 12072012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Complemental strand, 13565054 - 13565002
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  13565054 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtc 13565002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 22168261 - 22168316
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccg 350  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  22168261 aaaaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccg 22168316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 1638440 - 1638497
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||| |||||||||||    
T  1638440 aaaaattagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtc 1638497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 9913251 - 9913304
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  9913251 aaaaatttgtgagggaattttagagagggaaaacgtgaaatccctctctaattc 9913304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 5473847 - 5473899
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  5473847 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtc 5473899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 16915346 - 16915414
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    |||||||||| |||  |||||||||||| ||||||||||||||||||||  ||||||| ||||||||||    
T  16915346 tcactactaaaaaaacaaaaattagtgacggaaatttagtgagggaaaatatgaaatctctctctaatt 16915414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 4586887 - 4586845
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 4586845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 9239406 - 9239368
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9239406 ttagtgagggaaaacgtgaaatccctctctaattccgtc 9239368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 13028945 - 13028903
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 13028903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 24682484 - 24682417
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||| |||  |||||||||||||||||||| |   ||||||||||||||||||||||||||||||    
T  24682484 cactactaaaaaagcaaaaattagtgagggaaattgaa--agggaaaacgtgaaatccctctctaattcc 24682417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 29625337 - 29625375
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29625337 ttagtgagggaaaacgtgaaatccctctctaattccgtc 29625375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 38223503 - 38223556
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  38223503 aaaaatttgtgagggaaatttagagagggaaaacgcaaaatccctctctaattc 38223556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 3612973 - 3613045
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| ||| ||||| |||||||| ||| ||||| |||| |||||||||||| ||||||||||| ||||    
T  3612973 cactactaaaaaagaaaaacttagtgagagaattttagagaggaaaaacgtgaaattcctctctaatttcgtc 3613045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 14944758 - 14944796
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  14944758 ttagtgagggaaaacgtaaaatccctctctaattccgtc 14944796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 25026565 - 25026607
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| ||||| |||||||||||||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtc 25026607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 38619859 - 38619897
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  38619859 ttagtgagggaaaacgtaaaatccctctctaattccgtc 38619897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 39234935 - 39234981
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctct 341  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||    
T  39234935 aaaaattagtgagggaaatttagagaaggaaaacgtgaaatctctct 39234981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 45091282 - 45091324
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtc 45091324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 9059074 - 9059039
Alignment:
Q  317 gtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||| |||||||||||||||||||||||    
T  9059074 gtgagggaaaacatgaaatccctctctaattccgtc 9059039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 4606954 - 4606916
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  4606954 ttagtgagggaaaaagtgaaatcactctctaattccgtc 4606916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 9670604 - 9670566
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  9670604 ttagtgagggaaaacgtaaaattcctctctaattccgtc 9670566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 12105995 - 12106033
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  12105995 ttagtgagggaaaacatgaaacccctctctaattccgtc 12106033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 18714910 - 18714952
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||    
T  18714910 aaatttagtaaggaaaaacgtaaaatccctctctaattccgtc 18714952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 30507999 - 30508037
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| || |||||||||||||||||||||    
T  30507999 ttagtgagggaaaatgtaaaatccctctctaattccgtc 30508037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 38645762 - 38645800
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  38645762 ttagtgagggaaaacgtaaaatccctctctaactccgtc 38645800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 25225092 - 25225145
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||| |||| ||||||||| ||  |||| |||||||||||||||||||||    
T  25225092 aaaaattaatgagagaaatttagagaaagaaatcgtgaaatccctctctaattc 25225145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 44783460 - 44783533
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctc-tctaattccgtc 352  Q
    ||||||||| |||  |||||||| ||||||| |||||  || ||||||| ||||||||||| ||||||||||||    
T  44783460 cactactaaaaaaataaaaattaatgagggatatttatcgaaggaaaacatgaaatccctcttctaattccgtc 44783533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 28262339 - 28262412
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28262339 tcactactaaaaaaataaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 28262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 30783314 - 30783386
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30783314 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 30783386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 32185808 - 32185880
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32185808 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 32185880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 37724151 - 37724079
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||    
T  37724151 cactactaaaaaataaaaaattagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtc 37724079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 352
Target Start/End: Complemental strand, 23388535 - 23388465
Alignment:
Q  281 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23388535 actactaaaaaataaaaa-ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 23388465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 31266332 - 31266402
Alignment:
Q  282 ctactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  31266332 ctactaaaaaatcaaaaattagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtc 31266402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 1141511 - 1141580
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1141511 tcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattc 1141580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 8430287 - 8430344
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8430287 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 8430344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 32300442 - 32300499
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32300442 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 32300499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 15636894 - 15636822
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  15636894 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtc 15636822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 27058475 - 27058407
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27058475 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattc 27058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 27522987 - 27523059
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  27522987 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 27523059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 41637594 - 41637666
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  41637594 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtc 41637666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 20065234 - 20065165
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||| |||  ||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  20065234 tcactactaaaaaaacaaaaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattc 20065165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 21293855 - 21293798
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  21293855 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtc 21293798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 28841502 - 28841429
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  28841502 tcactactaaaaaaacaaaaattagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtc 28841429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 29749562 - 29749490
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  29749562 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtc 29749490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 14757282 - 14757208
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  ||||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||    
T  14757282 atcactactaaaaaaacaaaaattagtgagtgatatttagtgagggaaaacatgaaatctctctctaattccgtc 14757208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 18551397 - 18551340
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||    
T  18551397 aaaaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtc 18551340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 22140508 - 22140451
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  22140508 aaaaattagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtc 22140451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 27327607 - 27327664
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  27327607 aaaaattaatgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtc 27327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 41736147 - 41736220
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||| |||||||||||||||||| || |||||||||||||||| ||||    
T  41736147 tcactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtc 41736220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 13613252 - 13613180
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||  |||||| |||||||||||||||||| |||||||||||||||||||||    
T  13613252 cactactaaaaaaataaaaattagcaagggaagtttagtgagggaaaacgtaaaatccctctctaattccgtc 13613180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 13788214 - 13788142
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||| |||||||||||||||||| || |||||||||||||||| ||||    
T  13788214 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtc 13788142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 22192183 - 22192235
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  22192183 aaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaatt 22192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 29998718 - 29998646
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||| ||||| || |||||||||||||||| ||||||||||||||    
T  29998718 cactactaaaaaagtaaaaattagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtc 29998646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 32008948 - 32009000
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  32008948 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtc 32009000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 28319713 - 28319666
Alignment:
Q  305 gagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtc 28319666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 44366141 - 44366087
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  44366141 aaaaattagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattcc 44366087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 18916544 - 18916491
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  18916544 aaaaattagtgagagaaatttagggagggaaaacatgaaatccctctctaattc 18916491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 26687835 - 26687778
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||    
T  26687835 aaaaattagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtc 26687778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 37802538 - 37802465
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  || |||||||||||||||||||| |||||||||||| |||||  ||||||||||||||    
T  37802538 tcactactaaaaaaacaacaattagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtc 37802465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 40018778 - 40018846
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||| |||  |||||||||||| | ||||||||||||||||||| ||||||| |||||||||||    
T  40018778 cactactaaaaaaccaaaaattagtgacgaaaatttagtgagggaaaacatgaaatctctctctaattc 40018846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 18609506 - 18609557
Alignment:
Q  296 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    |||||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  18609506 aaaattagtgggggaaatttagtgagggaaaacatgaaatacctctctaatt 18609557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Complemental strand, 9004452 - 9004398
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||||||||||||||||||| || ||||  ||||||||||||    
T  9004452 aaaaattagtgagggaaatttagtgagggaaaatgtaaaatttctctctaattcc 9004398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 36373876 - 36373937
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctct 341  Q
    ||||||||| |||  |||||||||||||| |||||||||||||||||| ||||||| |||||    
T  36373876 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtgaaattcctct 36373937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 9590461 - 9590513
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||||||||||||||||| |||  ||||||||||||| ||||||||||    
T  9590461 aaaaattagtgagggaaatttagcgagcaaaaacgtgaaatcgctctctaatt 9590513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 16099048 - 16098996
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||| ||||||||| ||||| |||||||| ||||||||||||||||||||    
T  16099048 aaaaatttgtgagggaattttagagagggaaagcgtgaaatccctctctaatt 16098996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 8763624 - 8763682
Alignment:
Q  294 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||   ||||||||||| ||||||| |||||||| ||||||||||||||    
T  8763624 aaaaaattagtgaaaaaaatttagtgaaggaaaacatgaaatccatctctaattccgtc 8763682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 37552233 - 37552275
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtc 37552275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 43408636 - 43408598
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  43408636 ttagtgagggaaaacgtaaaatccctctctaattccgtc 43408598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 44722930 - 44722980
Alignment:
Q  302 agtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||||||||| |||||  |||||||||||||||||||||||    
T  44722930 agtgagggatatttagtgagagaaaatatgaaatccctctctaattccgtc 44722980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 2556086 - 2556143
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||| ||||| ||||||||| |||||||   ||||||||||||||    
T  2556086 aaaaattagtgagggaattttagagagggaaaatgtgaaatttttctctaattccgtc 2556143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 24117389 - 24117316
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| |||  |||||||||||||| |||||||| || | ||||| |||||| | ||||||||||||||    
T  24117389 tcactactaagaaaacaaaaattagtgaggaaaatttagagaagaaaaacatgaaattcatctctaattccgtc 24117316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 12779606 - 12779648
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||    
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtc 12779648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 23858086 - 23858044
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtc 23858044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 347
Target Start/End: Original strand, 7093578 - 7093611
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||||||||||| ||||||||||||||||    
T  7093578 ttagtgagggaaaacgtaaaatccctctctaatt 7093611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 13134765 - 13134712
Alignment:
Q  294 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaatt 347  Q
    ||||||||||||||  |||||||| || ||||||| |||||||||| |||||||    
T  13134765 aaaaaattagtgagaaaaatttagagatggaaaacttgaaatccctttctaatt 13134712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 36550844 - 36550881
Alignment:
Q  312 atttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattcc 36550881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 74700 - 74628
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  74700 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 74628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 58562 - 58634
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  58562 cactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtc 58634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 19581 - 19655
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  19581 atcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 19655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 10136 - 10210
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  10136 atcactactaaaaaaataaaaattagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtc 10210  T

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Target: scaffold0001 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 84281 - 84355
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  84281 atcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtc 84355  T

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Target: scaffold0001; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 8254 - 8197
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  8254 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 8197  T

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Target: scaffold0001; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 21986 - 21929
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  21986 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 21929  T

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Target: scaffold0603 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 6138 - 6069
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6138 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattcc 6069  T

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Target: scaffold0576 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 9388 - 9316
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  9388 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtc 9316  T

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Target: scaffold0087 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 37946 - 37874
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  37946 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtc 37874  T

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Target: scaffold0161 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 6773 - 6847
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| |||  |||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  6773 atcactactaaaaaaacaaaaattagtaagggaaatttagtgagggaaaacatgaaattcctctctaattccgtc 6847  T

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Target: scaffold0007 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 276295 - 276221
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| | |  ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  276295 atcactactaaaagaacaaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtc 276221  T

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Target: scaffold0007; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 202768 - 202826
Alignment:
Q  294 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  202768 aaaaaattagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtc 202826  T

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Target: scaffold0007; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 304 - 352
Target Start/End: Original strand, 3746 - 3794
Alignment:
Q  304 tgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3746 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 3794  T

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Target: scaffold0717 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 1063 - 1006
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  1063 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtc 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 7500 - 7557
Alignment:
Q  295 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7500 aaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 7557  T

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Target: scaffold0009 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 278 - 351
Target Start/End: Original strand, 219614 - 219687
Alignment:
Q  278 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    ||||||||||| |||  ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||    
T  219614 atcactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatccctctctaattccgt 219687  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 314 - 351
Target Start/End: Complemental strand, 215781 - 215744
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  215781 ttagtgagggaaaacgtaaaatccctctctaattccgt 215744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 12633 - 12704
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  12633 cactactaagaaaacaaaaattagtgagggaaattttgtgagggaaaacgtg-aatccctctctaattccgtc 12704  T

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Target: scaffold0023 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 39862 - 39790
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||| |||  |||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||    
T  39862 cactactaaaaaaacaaaaattagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtc 39790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 300 - 352
Target Start/End: Original strand, 26483 - 26535
Alignment:
Q  300 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtc 26535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 112309 - 112380
Alignment:
Q  281 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||| ||| ||||||||||||||| ||||| || |||| ||||||| |||||||||||||||||||||    
T  112309 actactaaaaaagaaaaaattagtgaggaaaattcagagaggaaaaacgttaaatccctctctaattccgtc 112380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 121124 - 121074
Alignment:
Q  302 agtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  121124 agtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtc 121074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 349
Target Start/End: Complemental strand, 84799 - 84764
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattcc 349  Q
    ||||||||||||||||| ||||||||||||||||||    
T  84799 ttagtgagggaaaacgtaaaatccctctctaattcc 84764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 10872 - 10940
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    ||||||||| |||  |||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||    
T  10872 cactactaaaaaaccaaaaattagtgagggaaatttactgaggaaaaacatgaaattcctctctaattc 10940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 3320 - 3253
Alignment:
Q  279 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattc 348  Q
    |||||||||| |||  ||||||| |||||||||||||||  ||||||||||||||||||||| |||||||    
T  3320 tcactactaaaaaagcaaaaatttgtgagggaaatttag--agggaaaacgtgaaatccctcactaattc 3253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 15119 - 15077
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 15077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 173438 - 173496
Alignment:
Q  294 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||| ||| ||||||||||||||||| | ||||| |||||||||||||||    
T  173438 aaaaaattagtgatggatatttagtgagggaaaacataaaatcactctctaattccgtc 173496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 22221 - 22263
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtc 22263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 351
Target Start/End: Original strand, 43915 - 43968
Alignment:
Q  298 aattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgt 351  Q
    ||||||||||| ||||||||||||||||||||| |||| | |||||||||||||    
T  43915 aattagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgt 43968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 74877 - 74808
Alignment:
Q  280 cactactaataaataaaaaattagtgagggaaatttagtgaggg-aaaacgtgaaatccctctctaattc 348  Q
    ||||||||| |||  |||||||||||| ||| |||||||||||| ||||| |||||||||||||||||||    
T  74877 cactactaaaaaaacaaaaattagtgaaggatatttagtgagggaaaaacatgaaatccctctctaattc 74808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 10792 - 10750
Alignment:
Q  310 aaatttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtc 10750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 439977 - 440015
Alignment:
Q  314 ttagtgagggaaaacgtgaaatccctctctaattccgtc 352  Q
    |||||||||||||| || |||||||||||||||||||||    
T  439977 ttagtgagggaaaatgtaaaatccctctctaattccgtc 440015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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