View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9751_low_45 (Length: 299)

Name: NF9751_low_45
Description: NF9751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9751_low_45
NF9751_low_45
[»] chr6 (15 HSPs)
chr6 (111-260)||(506037-506186)
chr6 (43-96)||(21002766-21002819)
chr6 (43-95)||(33705800-33705852)
chr6 (47-94)||(21904865-21904912)
chr6 (43-93)||(6535408-6535458)
chr6 (46-94)||(605807-605855)
chr6 (43-94)||(5146818-5146869)
chr6 (43-94)||(9566406-9566457)
chr6 (43-94)||(12396026-12396077)
chr6 (43-94)||(14630813-14630864)
chr6 (39-94)||(22695944-22695999)
chr6 (43-92)||(583662-583711)
chr6 (43-95)||(3199554-3199606)
chr6 (43-91)||(6390275-6390323)
chr6 (43-91)||(33243533-33243581)
[»] chr5 (23 HSPs)
chr5 (38-99)||(8145029-8145090)
chr5 (43-94)||(2268616-2268667)
chr5 (43-94)||(18705856-18705907)
chr5 (43-91)||(9177221-9177269)
chr5 (43-95)||(22619795-22619847)
chr5 (43-94)||(5214266-5214317)
chr5 (43-94)||(11062348-11062399)
chr5 (43-93)||(8343043-8343093)
chr5 (43-96)||(23910662-23910715)
chr5 (43-91)||(974188-974236)
chr5 (44-96)||(2033736-2033788)
chr5 (43-95)||(18036218-18036270)
chr5 (46-94)||(20166062-20166110)
chr5 (43-91)||(26408999-26409047)
chr5 (43-94)||(15440520-15440571)
chr5 (43-94)||(18674210-18674261)
chr5 (43-94)||(38245103-38245154)
chr5 (40-94)||(31912703-31912757)
chr5 (52-94)||(34929538-34929580)
chr5 (43-96)||(38789947-38790000)
chr5 (43-96)||(39412150-39412203)
chr5 (43-91)||(3578002-3578050)
chr5 (38-94)||(25945684-25945740)
[»] chr4 (26 HSPs)
chr4 (43-96)||(51716119-51716172)
chr4 (43-97)||(45311597-45311651)
chr4 (43-96)||(31317256-31317309)
chr4 (43-99)||(40005774-40005830)
chr4 (43-94)||(32328396-32328447)
chr4 (46-96)||(51892997-51893047)
chr4 (43-96)||(18436788-18436841)
chr4 (43-96)||(40147628-40147681)
chr4 (43-95)||(8444656-8444708)
chr4 (43-91)||(30560663-30560711)
chr4 (43-99)||(46008542-46008598)
chr4 (43-94)||(1613941-1613992)
chr4 (43-94)||(28693255-28693306)
chr4 (43-94)||(42598910-42598961)
chr4 (43-94)||(47690653-47690704)
chr4 (43-94)||(49264235-49264286)
chr4 (44-94)||(1922494-1922544)
chr4 (43-93)||(13199366-13199416)
chr4 (43-93)||(41965142-41965192)
chr4 (45-95)||(45848383-45848433)
chr4 (46-91)||(12398708-12398753)
chr4 (43-92)||(43979276-43979325)
chr4 (43-96)||(45226368-45226421)
chr4 (43-91)||(5814137-5814185)
chr4 (40-92)||(11021308-11021360)
chr4 (43-91)||(32384266-32384314)
[»] chr8 (15 HSPs)
chr8 (38-94)||(2705163-2705219)
chr8 (40-94)||(41441633-41441687)
chr8 (43-96)||(4528639-4528692)
chr8 (43-96)||(10496052-10496105)
chr8 (44-93)||(32539138-32539187)
chr8 (43-95)||(17696963-17697015)
chr8 (43-96)||(2057086-2057139)
chr8 (43-96)||(37405871-37405924)
chr8 (46-94)||(30795143-30795191)
chr8 (43-94)||(7050469-7050520)
chr8 (43-94)||(10837531-10837582)
chr8 (43-94)||(27697029-27697080)
chr8 (43-96)||(9855669-9855722)
chr8 (43-95)||(2232984-2233036)
chr8 (43-95)||(34181153-34181205)
[»] chr7 (16 HSPs)
chr7 (43-94)||(19277007-19277058)
chr7 (43-96)||(6607883-6607936)
chr7 (43-96)||(6626164-6626217)
chr7 (43-94)||(2765301-2765352)
chr7 (43-94)||(18732638-18732689)
chr7 (43-94)||(21766508-21766559)
chr7 (43-96)||(47404212-47404265)
chr7 (43-94)||(8952773-8952824)
chr7 (52-95)||(23999920-23999963)
chr7 (43-90)||(24164017-24164064)
chr7 (43-94)||(38816591-38816642)
chr7 (40-94)||(21276335-21276389)
chr7 (46-91)||(17356970-17357015)
chr7 (43-96)||(35193681-35193734)
chr7 (46-94)||(36508397-36508445)
chr7 (43-91)||(44141412-44141460)
[»] chr2 (18 HSPs)
chr2 (39-94)||(18707881-18707936)
chr2 (43-94)||(32928076-32928127)
chr2 (43-94)||(40691396-40691447)
chr2 (43-93)||(430574-430624)
chr2 (43-93)||(3952276-3952326)
chr2 (43-97)||(9777334-9777388)
chr2 (43-96)||(39060404-39060457)
chr2 (43-91)||(11108769-11108817)
chr2 (43-94)||(8031071-8031122)
chr2 (47-94)||(14827498-14827545)
chr2 (46-101)||(16265735-16265790)
chr2 (43-94)||(32503979-32504030)
chr2 (39-94)||(41186249-41186304)
chr2 (43-93)||(5674355-5674405)
chr2 (43-96)||(4831111-4831164)
chr2 (43-80)||(45003104-45003141)
chr2 (43-91)||(7900263-7900311)
chr2 (43-91)||(18906927-18906975)
[»] chr1 (24 HSPs)
chr1 (43-94)||(2731070-2731121)
chr1 (43-94)||(2937139-2937190)
chr1 (43-94)||(5132426-5132477)
chr1 (43-94)||(28486620-28486671)
chr1 (43-94)||(28838101-28838152)
chr1 (43-94)||(44396404-44396455)
chr1 (43-94)||(44519701-44519752)
chr1 (43-93)||(47672306-47672356)
chr1 (43-97)||(50756022-50756076)
chr1 (38-95)||(29548580-29548637)
chr1 (43-95)||(1342795-1342847)
chr1 (43-95)||(6782565-6782617)
chr1 (43-94)||(1366302-1366353)
chr1 (43-94)||(5905095-5905146)
chr1 (43-94)||(23253688-23253739)
chr1 (43-94)||(25378688-25378739)
chr1 (43-94)||(38872510-38872561)
chr1 (43-94)||(39950232-39950283)
chr1 (43-94)||(47648219-47648270)
chr1 (43-94)||(49628454-49628505)
chr1 (43-92)||(36466298-36466347)
chr1 (43-92)||(38019327-38019376)
chr1 (51-91)||(14556383-14556423)
chr1 (43-99)||(30057290-30057346)
[»] scaffold0651 (1 HSPs)
scaffold0651 (43-96)||(6389-6442)
[»] scaffold1095 (1 HSPs)
scaffold1095 (43-94)||(29-80)
[»] scaffold0302 (1 HSPs)
scaffold0302 (43-94)||(14487-14538)
[»] scaffold0275 (1 HSPs)
scaffold0275 (43-94)||(1266-1317)
[»] scaffold0009 (1 HSPs)
scaffold0009 (43-94)||(58447-58498)
[»] chr3 (28 HSPs)
chr3 (43-94)||(35565433-35565484)
chr3 (43-94)||(40790809-40790860)
chr3 (43-94)||(51753895-51753946)
chr3 (45-94)||(49665660-49665709)
chr3 (46-94)||(29352687-29352735)
chr3 (39-94)||(11692155-11692210)
chr3 (43-94)||(21561162-21561213)
chr3 (43-94)||(27957823-27957874)
chr3 (43-94)||(33092034-33092085)
chr3 (43-94)||(47982690-47982741)
chr3 (43-94)||(47991977-47992028)
chr3 (43-94)||(48001264-48001315)
chr3 (43-94)||(48010551-48010602)
chr3 (43-94)||(54090171-54090222)
chr3 (43-96)||(3017249-3017303)
chr3 (43-97)||(29015715-29015769)
chr3 (43-93)||(47358518-47358568)
chr3 (46-96)||(47982361-47982411)
chr3 (46-96)||(47991648-47991698)
chr3 (46-96)||(48000935-48000985)
chr3 (46-96)||(48010222-48010272)
chr3 (43-92)||(16731921-16731970)
chr3 (40-101)||(16732277-16732338)
chr3 (43-91)||(16222478-16222526)
chr3 (43-91)||(19987838-19987886)
chr3 (46-94)||(21440968-21441016)
chr3 (43-91)||(40036649-40036697)
chr3 (44-96)||(51437330-51437382)
[»] scaffold0170 (1 HSPs)
scaffold0170 (43-93)||(5510-5560)
[»] scaffold0045 (1 HSPs)
scaffold0045 (43-94)||(35334-35385)
[»] scaffold0825 (1 HSPs)
scaffold0825 (46-95)||(1173-1222)
[»] scaffold0385 (1 HSPs)
scaffold0385 (43-91)||(12971-13019)
[»] scaffold0015 (1 HSPs)
scaffold0015 (43-91)||(50078-50126)


Alignment Details
Target: chr6 (Bit Score: 146; Significance: 6e-77; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 111 - 260
Target Start/End: Original strand, 506037 - 506186
Alignment:
Q  111 ttgattgaaagaaaaattcgatagagtttatcttgattaaatgataaatgttgtgaatcgtgtacataattttcctatttatatagttgagaaactaatt 210  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  506037 ttgattgaaagaaaaattccatagagtttatcttgattaaatgataaatgttgtgaatcgtgtacataattttcctatttatatagttgagaaactaatt 506136  T
Q  211 tttaactaattcctaattactaaccaaactaacataatttctatattcat 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  506137 tttaactaattcctaattactaaccaaactaacataatttctatattcat 506186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 21002819 - 21002766
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||    
T  21002819 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaa 21002766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 33705852 - 33705800
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||    
T  33705852 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacca 33705800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 21904912 - 21904865
Alignment:
Q  47 aataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  21904912 aataccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 21904865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 6535458 - 6535408
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||    
T  6535458 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 6535408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 605807 - 605855
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  605807 caatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 605855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 5146869 - 5146818
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| | ||||||||||||| |||||||| |||||||||||    
T  5146869 gaccaatgccaaaatctaatgaaagtgcaaggactaaagacatatttaaacc 5146818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 9566406 - 9566457
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||||  |||||| ||||||||||||||| |||||||| |||||||||||    
T  9566406 gaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 9566457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 12396026 - 12396077
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| |||| |||||||||| |||||||| |||||||||||    
T  12396026 gaccaatgccaaaatctgattaaagtgcaaggactaaagacatatttaaacc 12396077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 14630864 - 14630813
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  14630864 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 14630813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 22695944 - 22695999
Alignment:
Q  39 tagagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||| ||||||| | ||||||||||||| |||||||  |||||||||||    
T  22695944 tagagaccaatgccaaaatctaatgaaagtgcaaggactaaaggcatatttaaacc 22695999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 583711 - 583662
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaa 92  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||    
T  583711 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaa 583662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 3199554 - 3199606
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    ||||||| ||||||| |||| |||||| ||| |||||||| ||||||||||||    
T  3199554 gaccaatgccaaaatctgataaaagtgtaaggactaaagacatatttaaacca 3199606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 6390275 - 6390323
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| | |||||||| ||||||||    
T  6390275 gaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 6390323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 33243533 - 33243581
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||||| |||||||  ||||||||    
T  33243533 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaa 33243581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 8145029 - 8145090
Alignment:
Q  38 atagagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaataa 99  Q
    |||| ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  8145029 atagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaataa 8145090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 2268616 - 2268667
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  2268616 gaccaataccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 2268667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 18705856 - 18705907
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  18705856 gaccaataccaaaatttgatgaaagtgcaaagactaaagacatatttaaacc 18705907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 9177221 - 9177269
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  9177221 gaccaatgccaaaatatgatgaaagtgcaggaactaaagatatatttaa 9177269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 22619795 - 22619847
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||    
T  22619795 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacca 22619847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 5214317 - 5214266
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  5214317 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 5214266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 11062399 - 11062348
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  11062399 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 11062348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 8343093 - 8343043
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||    
T  8343093 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 8343043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 23910662 - 23910715
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||||    
T  23910662 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccaa 23910715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 974188 - 974236
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||||||||||| ||||||||||||| | |||||||| ||||||||    
T  974188 gaccaataccaaaatctgatgaaagtgcagggactaaagacatatttaa 974236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 2033788 - 2033736
Alignment:
Q  44 accaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||||| ||||||| ||||||||||||||| |||||||  |||||||||||||    
T  2033788 accaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccaa 2033736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 18036270 - 18036218
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    ||||||| ||||||| ||||||||||||||| |||||||| || |||||||||    
T  18036270 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatttttaaacca 18036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 20166110 - 20166062
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||| ||||||| |||||||||||||||||||||||  |||||||||||    
T  20166110 caatgccaaaatctgatgaaagtgcaagaactaaaggcatatttaaacc 20166062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 26408999 - 26409047
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||    
T  26408999 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 26409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 15440571 - 15440520
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||||||| |||| |||||||||| |||||| | |||||||||||    
T  15440571 gaccaataccaaaatctgataaaagtgcaaggactaaatacatatttaaacc 15440520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 18674210 - 18674261
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  18674210 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 18674261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 38245103 - 38245154
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  38245103 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 38245154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 31912757 - 31912703
Alignment:
Q  40 agagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||| |||||||||||| ||||||||||||||| |  ||||| |||||||||||    
T  31912757 agagatcaataccaaaatctgatgaaagtgcaaggatcaaagacatatttaaacc 31912703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 34929580 - 34929538
Alignment:
Q  52 caaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||| ||||||||||||||| |||||||| |||||||||||    
T  34929580 caaaatctgatgaaagtgcaaggactaaagacatatttaaacc 34929538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 38790000 - 38789947
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||||||  |||||| ||||||||||||||| |||||||  |||||||||||||    
T  38790000 gaccaatgtcaaaatctgatgaaagtgcaaggactaaaggaatatttaaaccaa 38789947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 39412203 - 39412150
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||||||  |||||| ||||||||||||||| |||||| | |||||||||||||    
T  39412203 gaccaatgtcaaaatctgatgaaagtgcaaggactaaatacatatttaaaccaa 39412150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 3578050 - 3578002
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| | |||||||| ||||||||    
T  3578050 gaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 3578002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 25945684 - 25945740
Alignment:
Q  38 atagagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||| ||||||| ||||||| ||||||||||||||| |||||||   ||||||||||    
T  25945684 atagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcgtatttaaacc 25945740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 51716172 - 51716119
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  51716172 gaccaatgccaaaatttgatgaaagtgcaaggactaaagacatatttaaaccaa 51716119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 45311597 - 45311651
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaat 97  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  45311597 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaat 45311651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 31317309 - 31317256
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||    
T  31317309 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaa 31317256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 40005774 - 40005830
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaataa 99  Q
    ||||||| ||||||| ||||||||||||||| ||||||| |||||||||||| ||||    
T  40005774 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggtatatttaaacctataa 40005830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 32328396 - 32328447
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  32328396 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 32328447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 51892997 - 51893047
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||| ||||||| ||||||||||||||| |||||||| |||||||||||||    
T  51892997 caatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaa 51893047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 18436841 - 18436788
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||||    
T  18436841 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccaa 18436788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 40147628 - 40147681
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| |||||||||||||||  ||||||| |||||||||||||    
T  40147628 gaccaatgccaaaatctgatgaaagtgcaaggtctaaagacatatttaaaccaa 40147681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 8444708 - 8444656
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    ||||||| ||||||| ||||||||||| ||| |||||||| ||||||||||||    
T  8444708 gaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaaacca 8444656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 30560663 - 30560711
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| |||||||||| ||||||||    
T  30560663 gaccaatgccaaaatatgatgaaagtgcaggaactaaagacatatttaa 30560711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 46008598 - 46008542
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaataa 99  Q
    ||||||| ||||||| ||||||||||||||| |||||||  ||||||||||| ||||    
T  46008598 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacctataa 46008542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 1613992 - 1613941
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  1613992 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 1613941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 28693255 - 28693306
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||||  |||||| ||||||||||||||| |||||||| |||||||||||    
T  28693255 gaccaatgacaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 28693306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 42598961 - 42598910
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  42598961 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 42598910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 47690653 - 47690704
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||| | |||||||| |||||||||||    
T  47690653 gaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaaacc 47690704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 49264235 - 49264286
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| || ||||| |||||||||||    
T  49264235 gaccaatgccaaaatctgatgaaagtgcaaggacgaaagacatatttaaacc 49264286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 1922544 - 1922494
Alignment:
Q  44 accaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  1922544 accaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 1922494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 13199366 - 13199416
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    ||||||| ||||||| ||||||||||||||| | ||||| |||||||||||    
T  13199366 gaccaatgccaaaatctgatgaaagtgcaaggattaaaggtatatttaaac 13199416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 41965192 - 41965142
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    ||||||| ||||||| ||||||||||||||| | |||||| ||||||||||    
T  41965192 gaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaac 41965142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 45848433 - 45848383
Alignment:
Q  45 ccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    ||||| ||||||| ||||||||||||||||||||||   ||||||||||||    
T  45848433 ccaatgccaaaatctgatgaaagtgcaagaactaaaaccatatttaaacca 45848383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 12398708 - 12398753
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||||||| ||| |||||||||||| |||||||| ||||||||    
T  12398708 caataccaaaaattggtgaaagtgcaaggactaaagacatatttaa 12398753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 43979325 - 43979276
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaa 92  Q
    ||||||| ||||||| ||||||||||||||| | |||||| |||||||||    
T  43979325 gaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaa 43979276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 45226368 - 45226421
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||||||||||||||||| | |||||||  |||||||| ||||    
T  45226368 gaccaatgccaaaatttgatgaaagtgcagggactaaaggcatatttaagccaa 45226421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 5814137 - 5814185
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| | |||||||| ||||||||    
T  5814137 gaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 5814185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 11021360 - 11021308
Alignment:
Q  40 agagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaa 92  Q
    |||||||||| |||||||||||||||| |||| ||| |||||  |||||||||    
T  11021360 agagaccaatgccaaaatttgatgaaaatgcaggaaataaaggcatatttaaa 11021308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 32384266 - 32384314
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| | |||||||| ||||||||    
T  32384266 gaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 32384314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 2705219 - 2705163
Alignment:
Q  38 atagagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  2705219 atagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 2705163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 41441633 - 41441687
Alignment:
Q  40 agagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||||||||||||||| | ||||||||||||| |||||||| |||||||||||    
T  41441633 agagaccaataccaaaatctcatgaaagtgcaaggactaaagacatatttaaacc 41441687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 4528692 - 4528639
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||    
T  4528692 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaa 4528639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 10496052 - 10496105
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||    
T  10496052 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaa 10496105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 32539138 - 32539187
Alignment:
Q  44 accaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  32539138 accaataccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 32539187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 17696963 - 17697015
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||    
T  17696963 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacca 17697015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 2057086 - 2057139
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| |||||||| |||||| ||||||| ||||||||||||||    
T  2057086 gaccaatgccaaaatctgatgaaaatgcaaggactaaaggtatatttaaaccaa 2057139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 37405924 - 37405871
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||    
T  37405924 gaccaatgccaaaatctgatgaaagtgtaagaactaaaggcatatttaaaccaa 37405871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 30795143 - 30795191
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  30795143 caatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 30795191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 7050520 - 7050469
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  7050520 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 7050469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 10837531 - 10837582
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| |||| |||||||||| |||||||| |||||||||||    
T  10837531 gaccaatgccaaaatctgataaaagtgcaaggactaaagacatatttaaacc 10837582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 27697029 - 27697080
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| |||||||| |||||| |||||||| |||||||||||    
T  27697029 gaccaatgccaaaatctgatgaaaatgcaaggactaaagacatatttaaacc 27697080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 9855669 - 9855722
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||| | |||||||| |||||||| ||||    
T  9855669 gaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagccaa 9855722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 2232984 - 2233036
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    ||||||| ||||||  | ||||||||||||| |||||||| ||||||||||||    
T  2232984 gaccaatgccaaaagctaatgaaagtgcaaggactaaagacatatttaaacca 2233036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 34181205 - 34181153
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    |||||||  |||||| |||||||||||| || |||||||| ||||||||||||    
T  34181205 gaccaatgtcaaaatctgatgaaagtgcgaggactaaagaaatatttaaacca 34181153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 19277007 - 19277058
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  19277007 gaccaatgccaaaatctgatgaaagtgcaaggactaaagatatatttaaacc 19277058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 6607883 - 6607936
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||    
T  6607883 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaa 6607936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 6626217 - 6626164
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||    
T  6626217 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaa 6626164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 2765301 - 2765352
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||||  |||||||||||||||||||||| |||||||| |||||||||||    
T  2765301 gaccaatgtcaaaatttgatgaaagtgcaaggactaaagacatatttaaacc 2765352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 18732689 - 18732638
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  18732689 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 18732638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 21766559 - 21766508
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  21766559 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 21766508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 47404212 - 47404265
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||||| |||||| | |||||||||||||    
T  47404212 gaccaatgccaaaatctgatgaaagtgcaaggactaaaaacatatttaaaccaa 47404265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 8952773 - 8952824
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  8952773 gaccaatgccaaaatctgatgaaagtgcaagcactaaaggcatatttaaacc 8952824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 23999963 - 23999920
Alignment:
Q  52 caaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    |||||| ||||||||||||||| |||||||| ||||||||||||    
T  23999963 caaaatctgatgaaagtgcaaggactaaagacatatttaaacca 23999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 24164064 - 24164017
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatattta 90  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||    
T  24164064 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattta 24164017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 38816591 - 38816642
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  38816591 gaccaatgccaaaatctgatgaaagtgcaaggactaaagtcatatttaaacc 38816642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 21276389 - 21276335
Alignment:
Q  40 agagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||||||| ||||||||||||||||||||| | || || |||| |||||||||    
T  21276389 agagaccaatgccaaaatttgatgaaagtgcagggaccaatgatacatttaaacc 21276335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 17356970 - 17357015
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    |||| ||||||| ||||||||||||| |||||||||| ||||||||    
T  17356970 caatgccaaaatctgatgaaagtgcaggaactaaagacatatttaa 17357015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 35193681 - 35193734
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||||||  |||||| ||||||||||||||| |||||||  |||||||||||||    
T  35193681 gaccaatgtcaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccaa 35193734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 36508397 - 36508445
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||||||||| |||||||||| |||| |||||||  |||||||||||    
T  36508397 caataccaaaatctgatgaaagtacaaggactaaaggcatatttaaacc 36508445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 44141460 - 44141412
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| | |||||||| ||||||||    
T  44141460 gaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 44141412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 18707881 - 18707936
Alignment:
Q  39 tagagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  18707881 tagagaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 18707936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 32928076 - 32928127
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  32928076 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 32928127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 40691447 - 40691396
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  40691447 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 40691396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 430624 - 430574
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||    
T  430624 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 430574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 3952276 - 3952326
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||    
T  3952276 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 3952326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 9777334 - 9777388
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaat 97  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||| ||||    
T  9777334 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaatcaat 9777388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 39060457 - 39060404
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||||||||||| ||||||||||||| | |||||||| |||||||| ||||    
T  39060457 gaccaataccaaaatctgatgaaagtgcagggactaaagacatatttaagccaa 39060404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 11108769 - 11108817
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  11108769 gaccaatgccaaaatctgatgaaagtgcagggactaaagatatatttaa 11108817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 8031122 - 8031071
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||||  |||||| ||||||||||||||| |||||||| |||||||||||    
T  8031122 gaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 8031071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 14827545 - 14827498
Alignment:
Q  47 aataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||| ||||||||||||||| |||||||  |||||||||||    
T  14827545 aataccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 14827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 16265735 - 16265790
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaataaac 101  Q
    ||||| |||||| |||||||||| |||| |||||||| ||||||||||| ||||||    
T  16265735 caatatcaaaatctgatgaaagtacaaggactaaagacatatttaaacctataaac 16265790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 32504030 - 32503979
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||| ||| |||||||| |||||||||||    
T  32504030 gaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaaacc 32503979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 41186304 - 41186249
Alignment:
Q  39 tagagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||| ||||||| ||||||||||||| | || ||||| |||||||||||    
T  41186304 tagagaccaatgccaaaatctgatgaaagtgcatggaccaaagacatatttaaacc 41186249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 5674355 - 5674405
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    ||||||| | ||||| |||| ||||||||||||||||||| ||||||||||    
T  5674355 gaccaatgctaaaatctgataaaagtgcaagaactaaagacatatttaaac 5674405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 4831164 - 4831111
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||||||| |||||  ||||||||||||||| |||||||| || ||||||||||    
T  4831164 gaccaatatcaaaacctgatgaaagtgcaaggactaaagacatgtttaaaccaa 4831111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 45003104 - 45003141
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaa 80  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  45003104 gaccaatgccaaaatttgatgaaagtgcaaggactaaa 45003141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 7900311 - 7900263
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| | ||||| ||||||||||||| | |||||||||||||||||    
T  7900311 gaccaatgctaaaatctgatgaaagtgcagggactaaagatatatttaa 7900263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 18906975 - 18906927
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| | |||||||| ||||||||    
T  18906975 gaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 18906927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 2731070 - 2731121
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  2731070 gaccaataccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 2731121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 2937139 - 2937190
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  2937139 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 2937190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 5132477 - 5132426
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  5132477 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 5132426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 28486671 - 28486620
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  28486671 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 28486620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 28838152 - 28838101
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  28838152 gaccaatgccaaaatctgatgaaagtgcaaggactaaagagatatttaaacc 28838101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 44396404 - 44396455
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  44396404 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 44396455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 44519701 - 44519752
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||||||| ||||||||||||||| | |||||| |||||||||||    
T  44519701 gaccaataccaaaatctgatgaaagtgcaaggattaaagacatatttaaacc 44519752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 47672306 - 47672356
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    ||||||||||||||| ||||||||||||||| |||||||  ||||||||||    
T  47672306 gaccaataccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 47672356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 50756022 - 50756076
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaat 97  Q
    ||||||| ||||||| ||||||||||||||| |||||||  ||||||||||||||    
T  50756022 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaaccaat 50756076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 29548637 - 29548580
Alignment:
Q  38 atagagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    |||| ||||||| ||||||| ||||||||||||||| |||||||  ||||||||||||    
T  29548637 atagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacca 29548580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 1342795 - 1342847
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    ||||||| ||||||| ||||||||||| ||| |||||||| ||||||||||||    
T  1342795 gaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaaacca 1342847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 6782617 - 6782565
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    ||||||| ||||||| ||||||||||||||| |||||||  ||||||||||||    
T  6782617 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacca 6782565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 1366353 - 1366302
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  1366353 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 1366302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 5905095 - 5905146
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||| | |||||||||||    
T  5905095 gaccaatgccaaaatctgatgaaagtgcaaggactaaaaacatatttaaacc 5905146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 23253688 - 23253739
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  23253688 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 23253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 25378739 - 25378688
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||  |||||||| |||||||||||    
T  25378739 gaccaatgccaaaatctgatgaaagtgcaaagactaaagacatatttaaacc 25378688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 38872561 - 38872510
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  38872561 gaccaatgccaaaatctgatgaaagtgcaaggactaaagtcatatttaaacc 38872510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 39950283 - 39950232
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||||||| ||||||||||| ||  |||||||| |||||||||||    
T  39950283 gaccaataccaaaatctgatgaaagtgtaaagactaaagacatatttaaacc 39950232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 47648219 - 47648270
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  47648219 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 47648270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 49628454 - 49628505
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| | ||||||||||||| |||||||| |||||||||||    
T  49628454 gaccaatgccaaaatctaatgaaagtgcaaggactaaagagatatttaaacc 49628505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 36466298 - 36466347
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaa 92  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||    
T  36466298 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaa 36466347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 38019327 - 38019376
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaa 92  Q
    |||||||  |||||| ||||||||||||||| |||||||| |||||||||    
T  38019327 gaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaa 38019376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 14556383 - 14556423
Alignment:
Q  51 ccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||||||||| | |||||||||||||||||    
T  14556383 ccaaaatctgatgaaagtgcagggactaaagatatatttaa 14556423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 30057290 - 30057346
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaataa 99  Q
    ||||||| ||||||| ||||||||||||||  |||||||  ||||||||||| ||||    
T  30057290 gaccaatgccaaaatctgatgaaagtgcaatgactaaaggcatatttaaacctataa 30057346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 6389 - 6442
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||    
T  6389 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaa 6442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 29 - 80
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  29 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 80  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 14487 - 14538
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||||||| ||||||||||||||| |||||||  |||||||||||    
T  14487 gaccaataccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 14538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 1317 - 1266
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  1317 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 58498 - 58447
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||||  |||||||||||||||||||||| |||||||| |||||||||||    
T  58498 gaccaatgtcaaaatttgatgaaagtgcaaggactaaagacatatttaaacc 58447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 35565433 - 35565484
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  35565433 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 35565484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 40790860 - 40790809
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  40790860 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 40790809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 51753946 - 51753895
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||| |||||    
T  51753946 gaccaataccaaaatctgatgaaagtgcaaggactaaagacatattaaaacc 51753895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 49665660 - 49665709
Alignment:
Q  45 ccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  49665660 ccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 49665709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 29352687 - 29352735
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||| ||||||| ||||||||||||||| |||||||| |||||||||||    
T  29352687 caatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacc 29352735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 11692210 - 11692155
Alignment:
Q  39 tagagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||||||||||  |||||| ||||||||||||||| |||||||  |||||||||||    
T  11692210 tagagaccaatgtcaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 11692155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 21561162 - 21561213
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  21561162 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 21561213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 27957823 - 27957874
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  27957823 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacc 27957874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 33092085 - 33092034
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||  ||||||||||||||| |||||||| |||||||||||    
T  33092085 gaccaatgccaaaaactgatgaaagtgcaaggactaaagacatatttaaacc 33092034  T

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Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 47982690 - 47982741
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  47982690 gaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaacc 47982741  T

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Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 47991977 - 47992028
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  47991977 gaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaacc 47992028  T

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Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 48001264 - 48001315
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  48001264 gaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaacc 48001315  T

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Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 48010551 - 48010602
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||||    
T  48010551 gaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatatttaaacc 48010602  T

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Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 54090171 - 54090222
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| | ||||||||||||| |||||||| |||||||||||    
T  54090171 gaccaatgccaaaatctaatgaaagtgcaaggactaaagacatatttaaacc 54090222  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 3017303 - 3017249
Alignment:
Q  43 gaccaataccaaaatttgat-gaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    ||||||| ||||||| |||| ||||||||||| |||||||| |||||||||||||    
T  3017303 gaccaatgccaaaatctgatcgaaagtgcaaggactaaagacatatttaaaccaa 3017249  T

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Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 29015769 - 29015715
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaat 97  Q
    |||||||  |||||| | ||||||||||||| |||||||| ||||||||||||||    
T  29015769 gaccaatgtcaaaatctaatgaaagtgcaaggactaaagacatatttaaaccaat 29015715  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 47358518 - 47358568
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    ||||||| ||||||| ||||||||||||||| |||||||  ||||||||||    
T  47358518 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaac 47358568  T

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Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 47982411 - 47982361
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||||||||||||||||||||||||| | || || |||| |||||||||||    
T  47982411 caataccaaaatttgatgaaagtgcagggaccaatgatacatttaaaccaa 47982361  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 47991698 - 47991648
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||||||||||||||||||||||||| | || || |||| |||||||||||    
T  47991698 caataccaaaatttgatgaaagtgcagggaccaatgatacatttaaaccaa 47991648  T

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Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 48000985 - 48000935
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||||||||||||||||||||||||| | || || |||| |||||||||||    
T  48000985 caataccaaaatttgatgaaagtgcagggaccaatgatacatttaaaccaa 48000935  T

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Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 48010272 - 48010222
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||||||||||||||||||||||||| | || || |||| |||||||||||    
T  48010272 caataccaaaatttgatgaaagtgcagggaccaatgatacatttaaaccaa 48010222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 16731970 - 16731921
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaa 92  Q
    ||||||| ||||||| ||||||||||||||| |||||||  |||||||||    
T  16731970 gaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaa 16731921  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 16732277 - 16732338
Alignment:
Q  40 agagaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaataaac 101  Q
    |||||||||| |||| |||||||||||||||||| || || || | ||||||||||| ||||    
T  16732277 agagaccaatgccaacatttgatgaaagtgcaaggaccaatgacacatttaaaccaaaaaac 16732338  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 16222526 - 16222478
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||||||||||||||||| | |||||||  ||||||||    
T  16222526 gaccaatgccaaaatttgatgaaagtgcagggactaaaggcatatttaa 16222478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 19987886 - 19987838
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| | |||||||| ||||||||    
T  19987886 gaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 19987838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 21441016 - 21440968
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    |||| ||||||| ||||||||||||||| | |||||| |||||||||||    
T  21441016 caatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaacc 21440968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 40036697 - 40036649
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    |||||||| |||||| | ||||||||||||| |||||||| ||||||||    
T  40036697 gaccaatatcaaaatctaatgaaagtgcaaggactaaagacatatttaa 40036649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 51437330 - 51437382
Alignment:
Q  44 accaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaaccaa 96  Q
    |||||| |||||||   ||||||||||||||| |||||| |||||||||||||    
T  51437330 accaatgccaaaatccaatgaaagtgcaagaattaaagacatatttaaaccaa 51437382  T

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Target: scaffold0170 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 5560 - 5510
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaac 93  Q
    ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||    
T  5560 gaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaac 5510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 35385 - 35334
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacc 94  Q
    ||||||| ||||||| ||||||||||||||| | |||||| |||||||||||    
T  35385 gaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaacc 35334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 1222 - 1173
Alignment:
Q  46 caataccaaaatttgatgaaagtgcaagaactaaagatatatttaaacca 95  Q
    |||| ||||||| ||||||||||||||| |||||||  ||||||||||||    
T  1222 caatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaacca 1173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 13019 - 12971
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||||||||||||||||| | |||||||  ||||||||    
T  13019 gaccaatgccaaaatttgatgaaagtgcagggactaaaggcatatttaa 12971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 50078 - 50126
Alignment:
Q  43 gaccaataccaaaatttgatgaaagtgcaagaactaaagatatatttaa 91  Q
    ||||||| ||||||| ||||||||||||| | |||||||| ||||||||    
T  50078 gaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 50126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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