View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9751_low_65 (Length: 250)
Name: NF9751_low_65
Description: NF9751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9751_low_65 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 3862787 - 3863029
Alignment:
| Q |
8 |
aagcaaaggcatcctgtggctggaaaatcgttggccgaattgatgaatttggtgcccgaattgagacttcctgaaattctgaattctgtcctttttatga |
107 |
Q |
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| T |
3862787 |
aagcaaaggcatcctgtggctggaaaatcggtggccgaattgatgaatttggtgcccgaattgagacttcctgaaattctgaattctgtccttcttatga |
3862886 |
T |
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| Q |
108 |
taatgaccaaatttgatttcagcgcaacagaaattgagctcgcacgagactattcaagtcctaaaaacttttctaaagtgaccatccttgaaaatagcat |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3862887 |
taatgaccaaatttgatttcagcgcaacagaaattgagctcgcacgagactattcaagtcctaaaaacttttctaaagtgaccatccttgaaaatagcat |
3862986 |
T |
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| Q |
208 |
tgaagggaatattgaaacttactaatagcttcttaaggatatc |
250 |
Q |
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| T |
3862987 |
tgaagggaatattgaaacttactaatagcttcttaaggatatc |
3863029 |
T |
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