View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9751_low_67 (Length: 249)

Name: NF9751_low_67
Description: NF9751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9751_low_67
NF9751_low_67
[»] chr5 (43 HSPs)
chr5 (1-110)||(606269-606378)
chr5 (110-217)||(36868880-36868987)
chr5 (110-217)||(14318389-14318496)
chr5 (110-217)||(1366530-1366637)
chr5 (110-217)||(2412077-2412184)
chr5 (110-217)||(2530901-2531008)
chr5 (110-205)||(16198798-16198893)
chr5 (110-217)||(34425892-34425999)
chr5 (110-217)||(11242322-11242429)
chr5 (109-202)||(26718952-26719045)
chr5 (109-202)||(26988696-26988789)
chr5 (109-217)||(24395728-24395836)
chr5 (110-213)||(2024646-2024749)
chr5 (110-205)||(9364292-9364387)
chr5 (110-205)||(27079012-27079107)
chr5 (110-205)||(34756370-34756465)
chr5 (110-205)||(38869367-38869462)
chr5 (110-217)||(40794331-40794438)
chr5 (110-217)||(41911621-41911728)
chr5 (110-215)||(33037771-33037876)
chr5 (109-217)||(10543663-10543770)
chr5 (110-205)||(28822346-28822441)
chr5 (111-205)||(15480094-15480188)
chr5 (112-205)||(19523200-19523293)
chr5 (110-205)||(16592078-16592173)
chr5 (111-207)||(36187884-36187980)
chr5 (110-205)||(16799331-16799426)
chr5 (110-205)||(23284066-23284161)
chr5 (110-205)||(30854330-30854425)
chr5 (110-205)||(40389540-40389635)
chr5 (111-205)||(2274891-2274985)
chr5 (96-201)||(7670929-7671035)
chr5 (110-215)||(10407452-10407557)
chr5 (110-215)||(22648740-22648845)
chr5 (110-182)||(7338023-7338095)
chr5 (110-205)||(22986562-22986657)
chr5 (110-201)||(31194616-31194706)
chr5 (132-214)||(15639635-15639717)
chr5 (116-204)||(27924084-27924172)
chr5 (110-201)||(31881438-31881528)
chr5 (110-151)||(606209-606250)
chr5 (110-215)||(17344947-17345052)
chr5 (1-42)||(9784503-9784544)
[»] scaffold1590 (1 HSPs)
scaffold1590 (110-217)||(265-372)
[»] scaffold0097 (1 HSPs)
scaffold0097 (110-217)||(38914-39021)
[»] chr6 (22 HSPs)
chr6 (110-217)||(2477591-2477698)
chr6 (108-205)||(33774121-33774218)
chr6 (110-217)||(20611782-20611889)
chr6 (77-216)||(21183654-21183788)
chr6 (110-205)||(28075787-28075882)
chr6 (110-217)||(6159430-6159537)
chr6 (110-205)||(13727406-13727501)
chr6 (110-205)||(17353958-17354053)
chr6 (110-205)||(20711727-20711822)
chr6 (110-205)||(21479498-21479593)
chr6 (110-205)||(19737699-19737794)
chr6 (114-205)||(27788699-27788790)
chr6 (110-204)||(21280550-21280644)
chr6 (110-207)||(34397859-34397956)
chr6 (110-201)||(1155856-1155947)
chr6 (111-205)||(24711007-24711101)
chr6 (110-188)||(30121783-30121861)
chr6 (120-217)||(4036940-4037037)
chr6 (111-205)||(30832532-30832626)
chr6 (110-168)||(27314185-27314244)
chr6 (110-205)||(235231-235328)
chr6 (175-203)||(27994775-27994803)
[»] chr4 (50 HSPs)
chr4 (110-217)||(27112024-27112131)
chr4 (110-217)||(36118464-36118571)
chr4 (110-217)||(36178667-36178773)
chr4 (111-215)||(37744916-37745021)
chr4 (110-215)||(52468282-52468387)
chr4 (110-217)||(10042006-10042113)
chr4 (129-215)||(4167916-4168002)
chr4 (110-217)||(51691921-51692030)
chr4 (110-205)||(10978906-10979001)
chr4 (102-205)||(37777221-37777324)
chr4 (110-217)||(45656169-45656276)
chr4 (110-205)||(54780783-54780878)
chr4 (114-211)||(2135331-2135428)
chr4 (110-206)||(35779332-35779427)
chr4 (110-205)||(34027585-34027680)
chr4 (110-217)||(36362877-36362983)
chr4 (110-205)||(38209597-38209692)
chr4 (110-217)||(39329398-39329505)
chr4 (110-205)||(43455537-43455632)
chr4 (112-205)||(13460213-13460306)
chr4 (116-217)||(40217226-40217327)
chr4 (117-217)||(24396928-24397028)
chr4 (110-205)||(2790747-2790842)
chr4 (110-197)||(32128598-32128685)
chr4 (110-205)||(47128993-47129088)
chr4 (110-205)||(48209246-48209341)
chr4 (112-217)||(15735089-15735189)
chr4 (110-205)||(16845027-16845123)
chr4 (110-205)||(34768580-34768675)
chr4 (111-205)||(1105538-1105632)
chr4 (114-207)||(5128852-5128945)
chr4 (110-207)||(10428203-10428308)
chr4 (111-199)||(37514671-37514759)
chr4 (129-205)||(40089522-40089598)
chr4 (110-205)||(54083248-54083343)
chr4 (111-205)||(32915391-32915485)
chr4 (110-203)||(35465115-35465207)
chr4 (110-205)||(19498510-19498603)
chr4 (110-193)||(16882401-16882484)
chr4 (110-184)||(39655260-39655334)
chr4 (110-182)||(51964737-51964812)
chr4 (114-169)||(17679442-17679497)
chr4 (110-157)||(23508516-23508564)
chr4 (117-217)||(29425187-29425287)
chr4 (110-161)||(16922335-16922386)
chr4 (152-205)||(23509846-23509899)
chr4 (164-205)||(24969443-24969484)
chr4 (1-34)||(30599915-30599948)
chr4 (110-146)||(24614018-24614054)
chr4 (29-65)||(34236846-34236882)
[»] chr2 (35 HSPs)
chr2 (110-217)||(21665707-21665814)
chr2 (110-217)||(38400786-38400893)
chr2 (110-217)||(24035552-24035659)
chr2 (129-217)||(12134066-12134154)
chr2 (110-215)||(16096998-16097103)
chr2 (136-217)||(37182658-37182739)
chr2 (114-217)||(16227379-16227482)
chr2 (110-209)||(28425717-28425816)
chr2 (110-205)||(29939869-29939964)
chr2 (110-215)||(13800551-13800657)
chr2 (110-205)||(9046029-9046125)
chr2 (110-205)||(3155217-3155312)
chr2 (110-205)||(24410437-24410532)
chr2 (110-205)||(26716128-26716224)
chr2 (110-205)||(4505894-4505989)
chr2 (110-205)||(6965007-6965102)
chr2 (110-217)||(11912764-11912871)
chr2 (110-205)||(12337455-12337550)
chr2 (110-214)||(7742140-7742245)
chr2 (110-205)||(10762572-10762667)
chr2 (108-205)||(8907084-8907181)
chr2 (111-205)||(3953006-3953100)
chr2 (111-205)||(7162784-7162878)
chr2 (131-215)||(22727530-22727614)
chr2 (110-169)||(40636174-40636233)
chr2 (110-204)||(27506747-27506841)
chr2 (141-217)||(11952644-11952720)
chr2 (110-217)||(10252396-10252511)
chr2 (110-169)||(34694011-34694070)
chr2 (110-169)||(34716423-34716482)
chr2 (110-184)||(42029166-42029240)
chr2 (129-169)||(5952741-5952781)
chr2 (181-217)||(37622418-37622454)
chr2 (147-214)||(29694375-29694437)
chr2 (110-159)||(11952595-11952643)
[»] chr8 (32 HSPs)
chr8 (110-217)||(15167422-15167529)
chr8 (110-217)||(41677180-41677288)
chr8 (110-217)||(39332412-39332519)
chr8 (111-217)||(5721548-5721654)
chr8 (124-217)||(5942685-5942778)
chr8 (109-214)||(15078750-15078855)
chr8 (109-217)||(25561501-25561607)
chr8 (109-212)||(8102906-8103009)
chr8 (110-215)||(7944529-7944634)
chr8 (110-211)||(8646201-8646301)
chr8 (110-215)||(11290175-11290280)
chr8 (110-215)||(5973114-5973219)
chr8 (111-215)||(34789870-34789974)
chr8 (110-205)||(23798268-23798363)
chr8 (110-205)||(45475818-45475913)
chr8 (110-215)||(14509990-14510094)
chr8 (110-205)||(23606636-23606731)
chr8 (110-217)||(23941098-23941205)
chr8 (110-205)||(30883330-30883425)
chr8 (111-205)||(37430166-37430260)
chr8 (101-205)||(42600783-42600887)
chr8 (110-205)||(2952228-2952323)
chr8 (110-205)||(5860751-5860846)
chr8 (110-205)||(10917392-10917487)
chr8 (110-205)||(13534694-13534788)
chr8 (110-205)||(13624234-13624328)
chr8 (110-185)||(30674410-30674485)
chr8 (110-205)||(41879182-41879277)
chr8 (110-217)||(34048712-34048821)
chr8 (116-205)||(3048530-3048619)
chr8 (109-149)||(34868183-34868223)
chr8 (110-148)||(9108551-9108589)
[»] chr1 (38 HSPs)
chr1 (110-217)||(38547042-38547149)
chr1 (110-215)||(45758496-45758601)
chr1 (117-217)||(26803948-26804045)
chr1 (96-205)||(27559649-27559758)
chr1 (110-217)||(39134728-39134836)
chr1 (110-217)||(6221678-6221784)
chr1 (110-215)||(43235774-43235881)
chr1 (110-205)||(5316692-5316787)
chr1 (110-205)||(23185439-23185534)
chr1 (110-217)||(33170759-33170866)
chr1 (110-205)||(44655753-44655848)
chr1 (102-207)||(40501788-40501893)
chr1 (110-207)||(50881440-50881537)
chr1 (111-207)||(6771801-6771897)
chr1 (111-203)||(16140069-16140161)
chr1 (110-205)||(4971624-4971719)
chr1 (110-205)||(9173029-9173124)
chr1 (110-205)||(9181011-9181106)
chr1 (110-205)||(17168968-17169063)
chr1 (111-205)||(14146312-14146406)
chr1 (112-213)||(38853527-38853627)
chr1 (110-205)||(1366884-1366979)
chr1 (110-205)||(5027561-5027656)
chr1 (114-215)||(5533314-5533416)
chr1 (110-205)||(19955729-19955824)
chr1 (110-204)||(51607445-51607540)
chr1 (111-205)||(3406430-3406524)
chr1 (111-205)||(3440296-3440390)
chr1 (110-196)||(21740943-21741029)
chr1 (111-205)||(41697144-41697238)
chr1 (129-217)||(10925979-10926067)
chr1 (110-206)||(50146307-50146403)
chr1 (101-205)||(13913477-13913583)
chr1 (109-192)||(35392295-35392377)
chr1 (110-167)||(6889661-6889718)
chr1 (110-167)||(6891507-6891564)
chr1 (25-61)||(3831348-3831384)
chr1 (7-39)||(43177758-43177790)
[»] scaffold0012 (1 HSPs)
scaffold0012 (110-211)||(206496-206597)
[»] scaffold0018 (1 HSPs)
scaffold0018 (110-213)||(173517-173620)
[»] chr7 (39 HSPs)
chr7 (110-217)||(7398440-7398547)
chr7 (109-217)||(23859062-23859170)
chr7 (110-217)||(27237429-27237536)
chr7 (110-205)||(29077221-29077316)
chr7 (110-211)||(2611268-2611369)
chr7 (116-217)||(9021812-9021912)
chr7 (110-217)||(6765687-6765794)
chr7 (110-217)||(12981315-12981422)
chr7 (109-217)||(20153190-20153298)
chr7 (110-205)||(18776772-18776867)
chr7 (110-205)||(48983850-48983945)
chr7 (112-189)||(21763595-21763672)
chr7 (110-205)||(23551076-23551172)
chr7 (109-213)||(36891571-36891675)
chr7 (110-205)||(8171545-8171640)
chr7 (110-205)||(20091287-20091382)
chr7 (110-205)||(24525691-24525786)
chr7 (129-204)||(38971255-38971330)
chr7 (101-205)||(47984966-47985071)
chr7 (111-205)||(10955485-10955579)
chr7 (110-202)||(36902930-36903022)
chr7 (110-217)||(12419501-12419608)
chr7 (110-205)||(19692095-19692190)
chr7 (111-205)||(12596294-12596388)
chr7 (108-205)||(8239688-8239785)
chr7 (129-210)||(23020509-23020589)
chr7 (110-194)||(23744808-23744892)
chr7 (129-205)||(38414901-38414977)
chr7 (110-205)||(10329416-10329511)
chr7 (110-217)||(18201126-18201233)
chr7 (114-201)||(28749715-28749801)
chr7 (117-217)||(9014782-9014875)
chr7 (110-182)||(26254017-26254089)
chr7 (110-182)||(33162345-33162417)
chr7 (140-215)||(17800257-17800332)
chr7 (124-185)||(26917727-26917788)
chr7 (1-45)||(30833539-30833583)
chr7 (110-159)||(9014184-9014233)
chr7 (164-205)||(25010434-25010475)
[»] scaffold1320 (1 HSPs)
scaffold1320 (109-214)||(1346-1451)
[»] chr3 (36 HSPs)
chr3 (108-205)||(8073343-8073440)
chr3 (109-215)||(8420320-8420426)
chr3 (110-217)||(26279532-26279641)
chr3 (111-205)||(47467688-47467782)
chr3 (110-217)||(54574834-54574941)
chr3 (110-205)||(54619210-54619305)
chr3 (110-205)||(21582775-21582870)
chr3 (110-217)||(25855414-25855520)
chr3 (110-217)||(28689368-28689475)
chr3 (110-205)||(34290643-34290738)
chr3 (110-205)||(44708481-44708576)
chr3 (109-211)||(32319161-32319263)
chr3 (110-217)||(42453403-42453503)
chr3 (110-205)||(3953903-3953998)
chr3 (110-205)||(43207245-43207339)
chr3 (110-205)||(53506891-53506986)
chr3 (110-204)||(37168372-37168466)
chr3 (111-205)||(42098805-42098899)
chr3 (114-215)||(789930-790031)
chr3 (110-203)||(38681100-38681193)
chr3 (110-215)||(49393085-49393188)
chr3 (110-215)||(52374650-52374755)
chr3 (101-205)||(27078567-27078671)
chr3 (101-205)||(27084364-27084468)
chr3 (110-197)||(54407165-54407252)
chr3 (111-205)||(53149322-53149416)
chr3 (110-203)||(18372485-18372582)
chr3 (110-201)||(36605973-36606064)
chr3 (114-205)||(9878698-9878789)
chr3 (110-201)||(36716032-36716123)
chr3 (110-205)||(50939240-50939335)
chr3 (111-169)||(50258631-50258689)
chr3 (136-213)||(29598103-29598179)
chr3 (138-205)||(29620423-29620490)
chr3 (114-167)||(23641329-23641382)
chr3 (1-37)||(42760517-42760553)
[»] scaffold0182 (1 HSPs)
scaffold0182 (114-217)||(24004-24107)
[»] scaffold0007 (1 HSPs)
scaffold0007 (110-217)||(230866-230973)
[»] scaffold0039 (1 HSPs)
scaffold0039 (110-205)||(106539-106634)
[»] scaffold0070 (1 HSPs)
scaffold0070 (112-205)||(1344-1437)
[»] scaffold0022 (2 HSPs)
scaffold0022 (110-215)||(40076-40183)
scaffold0022 (110-215)||(138136-138243)
[»] scaffold0227 (2 HSPs)
scaffold0227 (138-217)||(16016-16095)
scaffold0227 (110-148)||(16123-16161)
[»] scaffold0003 (1 HSPs)
scaffold0003 (129-214)||(351360-351445)
[»] scaffold0001 (1 HSPs)
scaffold0001 (111-160)||(183106-183155)


Alignment Details
Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 606378 - 606269
Alignment:
Q  1 tcaaattgagggtctccattgtggatggtcttagggcacttgttagcatttttcttaaaaataaacagtacctgtcagtgaaaggaggttcgtaataaaa 100  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  606378 tcaaattgaaggtctctattgtggatggtcttagggcacttgttagcattttccttaaaaataaacagtacctgccagtgaaaggatgttcgtaataaaa 606279  T
Q  101 taaaaacgta 110  Q
    ||||||||||    
T  606278 taaaaacgta 606269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 36868880 - 36868987
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| |||||    
T  36868880 aatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgaggaatctcaa 36868979  T
Q  210 accaccct 217  Q
    ||||||||    
T  36868980 accaccct 36868987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 14318389 - 14318496
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||| | |||  ||||||||||||||||||||||||||||||||||    
T  14318389 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgaggaacctcaa 14318488  T
Q  210 accaccct 217  Q
    ||||||||    
T  14318489 accaccct 14318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 1366530 - 1366637
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||| |||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||     
T  1366530 aatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgaggaacctcat 1366629  T
Q  210 accaccct 217  Q
    ||||||||    
T  1366630 accaccct 1366637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 2412184 - 2412077
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||| |||||||||| |||||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||    
T  2412184 aatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgaggaacctcaa 2412085  T
Q  210 accaccct 217  Q
    ||||||||    
T  2412084 accaccct 2412077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 2530901 - 2531008
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||||||| || |||| | ||| |||||||||||||| ||||||||||||||||||||    
T  2530901 aatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacctcaa 2531000  T
Q  210 accaccct 217  Q
    ||||||||    
T  2531001 accaccct 2531008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 16198798 - 16198893
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  16198798 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacc 16198893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 34425999 - 34425892
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||| |||  | ||||||| ||||||||||||||||||||||||    
T  34425999 aatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgaggaacctcaa 34425900  T
Q  210 accaccct 217  Q
    ||||||||    
T  34425899 accaccct 34425892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 11242322 - 11242429
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||||||| |||||||||||||||||  ||  ||||||||| |||||| | |||  || |||||||||||||||||||||||||||||||    
T  11242322 aatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgaggaacctcaa 11242421  T
Q  210 accaccct 217  Q
    ||||||||    
T  11242422 accaccct 11242429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 26718952 - 26719045
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagga 202  Q
    |||||||||||||||  || ||||||||||||||||| ||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||    
T  26718952 taatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 26988696 - 26988789
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagga 202  Q
    |||||||||||||||  || ||||||||||||||||| ||||||||||||||||||||||  ||| |||||||||||||||| |||||||||||    
T  26988696 taatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 24395836 - 24395728
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||| | ||||| | ||| ||||||||||| |||||||| ||||||||| | |    
T  24395836 taatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaacttta 24395737  T
Q  209 aaccaccct 217  Q
    |||||||||    
T  24395736 aaccaccct 24395728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 2024646 - 2024749
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| || |||||||||||||| ||| |||||||||| |||||||| |||  |||||||||||||| |||||||||||| ||||||    
T  2024646 aatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgaggatcctcaa 2024745  T
Q  210 acca 213  Q
    ||||    
T  2024746 acca 2024749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 9364387 - 9364292
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  9364387 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 9364292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 27079107 - 27079012
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| ||| |||||||| ||||| ||||||||||||||||    
T  27079107 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacc 27079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 34756370 - 34756465
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  34756370 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 34756465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 38869367 - 38869462
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| ||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||| ||||    
T  38869367 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 38869462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 40794331 - 40794438
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||| ||||||| ||| |||||||| |||||||| | | |||| ||||  |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  40794331 aatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaacctcaa 40794430  T
Q  210 accaccct 217  Q
    ||||||||    
T  40794431 accaccct 40794438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 41911621 - 41911728
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    ||||||| | |||||||| |||||||| ||||||||||||||||||||| ||| |||||| ||| || |||||||||| |||||| ||||||||||||||    
T  41911621 aatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgaggaacctcaa 41911720  T
Q  210 accaccct 217  Q
    | ||||||    
T  41911721 atcaccct 41911728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 33037876 - 33037771
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||| ||||||| ||| |||||||||||||||||| | |||||||||||   |||||| ||| ||||||| || ||||||||||||||||||||||||    
T  33037876 aatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgaggaacctcaa 33037777  T
Q  210 accacc 215  Q
    ||||||    
T  33037776 accacc 33037771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 10543770 - 10543663
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    |||||||| | |||| ||| |||||||||||||| ||||||  |||||||||||||||| | ||| ||||||||||||||||||||||| ||||| ||||    
T  10543770 taatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat-aggaatctca 10543672  T
Q  209 aaccaccct 217  Q
    |||||||||    
T  10543671 aaccaccct 10543663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 28822346 - 28822441
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| |||||||||||||||| |||||    
T  28822346 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacc 28822441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 15480094 - 15480188
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| |||||||||||||||||| ||||||||||||||| |||||| | | |||||||| |||||||||| |||||||||||    
T  15480094 atgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacc 15480188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 19523293 - 19523200
Alignment:
Q  112 tgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| |||||| |||||||||||||||    
T  19523293 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacc 19523200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 16592078 - 16592173
Alignment:
Q  110 aatgttctattta-attttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||| | | |||||||| ||||||||||| ||||||||||    
T  16592078 aatgttctatttatattttc-taaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacc 16592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 36187884 - 36187980
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 207  Q
    ||||||||||||  ||| |||||| |||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||| ||||||    
T  36187884 atgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctc 36187980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 16799331 - 16799426
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||| ||||||| |||||| |||||||||||| |||||| ||| |||||||| | ||||||||||||||||||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 16799426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 23284066 - 23284161
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||   |||||||||||||||||||||||||| |||||| |||  ||||||| ||||||||||||||||||||||    
T  23284066 aatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgaggaacc 23284161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 30854425 - 30854330
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||  | | |||||||| |||| |||||||||||||||||    
T  30854425 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacc 30854330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 40389540 - 40389635
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| ||||||||||||||||||| |||| | ||| |||||||| ||||||||||  ||||||||||    
T  40389540 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaacc 40389635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 2274985 - 2274891
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| |||||||||||||||||||| ||||||||||||  |||||| | | |||||||| ||||||||||||| ||||||||    
T  2274985 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacc 2274891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 7671035 - 7670929
Alignment:
Q  96 taaaataaaaacgtaatgttctattta-attttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtata 194  Q
    ||||| ||||| | ||||||||||||| ||||| |||||||||||||| |||||| ||||||| | || |||||| ||| |||||||| |||||||||||    
T  7671035 taaaaaaaaaaagcaatgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtata 7670936  T
Q  195 catgagg 201  Q
    |||||||    
T  7670935 catgagg 7670929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 10407557 - 10407452
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||| |||||   |||| | ||| |||||||| |||||||||| ||||||||| ||| |    
T  10407557 aatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgaggaatctcca 10407458  T
Q  210 accacc 215  Q
    ||||||    
T  10407457 accacc 10407452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 22648740 - 22648845
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||||||| |  ||| | ||| |||| ||||||||| ||||| || || ||||||||    
T  22648740 aatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtataaataagaaacctcaa 22648839  T
Q  210 accacc 215  Q
    ||||||    
T  22648840 accacc 22648845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 7338095 - 7338023
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaat 182  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  7338095 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 22986562 - 22986657
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||| |  ||| |||||||| |||||||| |||||||||||||||| |||||| | | |||||||| ||||||||||||||||| ||||    
T  22986562 aatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaacc 22986657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 31194616 - 31194706
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagg 201  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| || ||| | | |||||||| ||||||||||||||||||    
T  31194616 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 15639717 - 15639635
Alignment:
Q  132 aaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccac 214  Q
    |||||||||||||||||| ||||||||||||||||| | |||  |||||||||||  ||||||||| |||||||| |||||||    
T  15639717 aaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaaccttaaaccac 15639635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 27924172 - 27924084
Alignment:
Q  116 ctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaac 204  Q
    |||||||  ||| |||||||||||||| |||||| |||||||||||| |||| | ||| || ||||| |||||||||||||||||||||    
T  27924172 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaac 27924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 31881438 - 31881528
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagg 201  Q
    |||||||||||||  ||| |||||||||||||||| |||| ||||||||||||  ||| | | |  ||||||| ||||||||||||||||||    
T  31881438 aatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 606250 - 606209
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtc 151  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  606250 aatgttctatttaaattttttaaaagataaatacaaggtgtc 606209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 17345052 - 17344947
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||| |  ||||||||||| |||| | |||||||| |||||| |||  | ||||| |||||||||| ||  | |||||||||    
T  17345052 aatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtatccacaaagaacctcaa 17344953  T
Q  210 accacc 215  Q
    ||||||    
T  17344952 accacc 17344947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9784544 - 9784503
Alignment:
Q  1 tcaaattgagggtctccattgtggatggtcttagggcacttg 42  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||    
T  9784544 tcaaattgagggtttccattgtggatgctcttaaggcacttg 9784503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 265 - 372
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  265 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatgaacctcaa 364  T
Q  210 accaccct 217  Q
    ||||||||    
T  365 accaccct 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 39021 - 38914
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  39021 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacctcaa 38922  T
Q  210 accaccct 217  Q
    ||||||||    
T  38921 accaccct 38914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 2477591 - 2477698
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    ||||||| |||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2477591 aatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 2477690  T
Q  210 accaccct 217  Q
    ||||||||    
T  2477691 accaccct 2477698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 33774218 - 33774121
Alignment:
Q  108 gtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||    
T  33774218 gtaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacc 33774121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 20611889 - 20611782
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    ||||||||| |||| ||| ||||| ||||||||||||||||||||||||| ||| ||| | ||| |||||||||||||||||||||||||||||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 20611790  T
Q  210 accaccct 217  Q
    || |||||    
T  20611789 actaccct 20611782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 216
Target Start/End: Original strand, 21183654 - 21183788
Alignment:
Q  77 agtgaaaggaggttcgtaataaaataaaaacgtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgt 176  Q
    ||||||| |||||  |||||||||||||||     | |||||||||| ||| ||||||||||||||||| ||  |||||||||| | |||||| |||  |    
T  21183654 agtgaaaagaggtcagtaataaaataaaaa-----tattctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagtt 21183748  T
Q  177 gaaaatcactaccgtatacatgaggaacctcaaaccaccc 216  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21183749 gaaaatcactaccgtatacatgaggaacctcaaaccaccc 21183788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 28075882 - 28075787
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  28075882 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacc 28075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 6159537 - 6159430
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||  ||| ||||||||||||||||| |||||||||||||||| ||||   ||| ||| |||||||||||||||| || |||||||||||    
T  6159537 aatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacctcaa 6159438  T
Q  210 accaccct 217  Q
    ||||||||    
T  6159437 accaccct 6159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 13727406 - 13727501
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  13727406 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13727501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 17354053 - 17353958
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||| ||||||||||| |||||    
T  17354053 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacc 17353958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 20711727 - 20711822
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  20711727 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 20711822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 21479593 - 21479498
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  21479593 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 19737699 - 19737794
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| || |||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  19737699 aatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacc 19737794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 27788699 - 27788790
Alignment:
Q  114 ttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  27788699 ttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 27788790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 204
Target Start/End: Complemental strand, 21280644 - 21280550
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaac 204  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | || ||||| |||||||||||||||||||||    
T  21280644 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaac 21280550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 34397956 - 34397859
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 207  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| ||| || ||||| |||| |||| ||||||||||||||    
T  34397956 aatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgaggaacctc 34397859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 1155856 - 1155947
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagg 201  Q
    |||||||||||||  ||| ||||||||||||||||||||||| |||||||||| |||| | | | |||||||| ||||||||||||||||||    
T  1155856 aatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 24711007 - 24711101
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||| | |||||  | | |||||||| ||||||||||||||||||||||    
T  24711007 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacc 24711101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 30121861 - 30121783
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactac 188  Q
    |||||| ||||||| ||| |||||| |||||||||||||||| ||||||||||||||| | ||| ||||||||||||||    
T  30121861 aatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 4037037 - 4036940
Alignment:
Q  120 ttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 217  Q
    ||||| || |||| |||||||||||||||| |||||||||  | |||||| ||| || || |||||||||||||| ||||||||| ||||||||||||    
T  4037037 ttaatatttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaacttcaaaccaccct 4036940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 30832532 - 30832626
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| |||||| ||||||||||| || |||||||||| | |||||| | |  ||||||| |||||||||| |||||||||||    
T  30832532 atgttctatttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacc 30832626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 27314185 - 27314244
Alignment:
Q  110 aatgttctattta-attttcttaaaagataaatacaaggtgtcgtatatatgcgatacac 168  Q
    ||||||||||||| ||||| | ||||||||||||||||||| |||||||||||| |||||    
T  27314185 aatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacac 27314244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 235231 - 235328
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcg--tatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||| ||||||||  ||| |||||||||||||| |||||| ||  ||||||| |  |||||| |||  ||||||| ||||||||||||||||| ||||    
T  235231 aatgatctatttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacc 235328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 203
Target Start/End: Complemental strand, 27994803 - 27994775
Alignment:
Q  175 gtgaaaatcactaccgtatacatgaggaa 203  Q
    |||||||||||||||||||||||||||||    
T  27994803 gtgaaaatcactaccgtatacatgaggaa 27994775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 27112131 - 27112024
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    ||||||| |||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27112131 aatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 27112032  T
Q  210 accaccct 217  Q
    ||||||||    
T  27112031 accaccct 27112024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 36118464 - 36118571
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||| |||||| |    
T  36118464 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacctcta 36118563  T
Q  210 accaccct 217  Q
    ||||||||    
T  36118564 accaccct 36118571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 36178773 - 36178667
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| | |||    
T  36178773 aatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatgaagaatc-caa 36178675  T
Q  210 accaccct 217  Q
    ||||||||    
T  36178674 accaccct 36178667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 37744916 - 37745021
Alignment:
Q  111 atgttctatttaa-ttttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    ||||||||||||| |||| |||||||||||||| ||||||||| |||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaa 37745015  T
Q  210 accacc 215  Q
    ||||||    
T  37745016 accacc 37745021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 52468387 - 52468282
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||||||  ||||| | ||| ||||||||||||||||||| |||||||||||||||    
T  52468387 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctcaa 52468288  T
Q  210 accacc 215  Q
    ||||||    
T  52468287 accacc 52468282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 10042006 - 10042113
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| | |||| |||||||||||||| ||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  10042006 aatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggaggaacctcaa 10042105  T
Q  210 accaccct 217  Q
    | ||||||    
T  10042106 atcaccct 10042113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 4167916 - 4168002
Alignment:
Q  129 ttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccacc 215  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| ||||    
T  4167916 ttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctcaaatcacc 4168002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 51691921 - 51692030
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacacc--aaaatgtgaaaatcactaccgtatacatgaggaacctc 207  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||||  |||| ||||||||||||||| |||||| || |||||||    
T  51691921 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatatacacgatgaacctc 51692020  T
Q  208 aaaccaccct 217  Q
    ||||||||||    
T  51692021 aaaccaccct 51692030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 10979001 - 10978906
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  10979001 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacc 10978906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 37777221 - 37777324
Alignment:
Q  102 aaaaacgtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagg 201  Q
    ||||| |||||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||    
T  37777221 aaaaaagtaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 37777320  T
Q  202 aacc 205  Q
    ||||    
T  37777321 aacc 37777324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 45656276 - 45656169
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||| ||||||| ||| ||||||||||||| ||||||||| ||||||||||||| | | ||||||||||||||| | ||||||||||| |||||||||    
T  45656276 aatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacctcaa 45656177  T
Q  210 accaccct 217  Q
    ||||||||    
T  45656176 accaccct 45656169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 54780878 - 54780783
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  54780878 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 54780783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 2135331 - 2135428
Alignment:
Q  114 ttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaac 211  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| | ||| || || ||||||| |||||| ||||||||||||||||    
T  2135331 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacctcaaac 2135428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 35779332 - 35779427
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacct 206  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||| ||| |||||||| | |||||||||||||||||||||    
T  35779332 aatgttctattatatttt-ttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacct 35779427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 34027680 - 34027585
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| ||||||||||||||||||| |||||| ||| |||||||| ||||| ||||||||||||||||    
T  34027680 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacc 34027585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 36362877 - 36362983
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||| ||| ||||| ||| ||||||||||||||||| ||| ||||||||||| ||||||| ||||||| ||||||||||| ||||||| |||||||||||    
T  36362877 aatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat-aggaacctcaa 36362975  T
Q  210 accaccct 217  Q
    ||||||||    
T  36362976 accaccct 36362983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 38209597 - 38209692
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  38209597 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 38209692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 39329398 - 39329505
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||| ||||| ||| |||||||||||||||||||||| ||||||||| |||||||| |||  ||||||||  ||||||||||| ||||||| ||||    
T  39329398 aatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaacatcaa 39329497  T
Q  210 accaccct 217  Q
    ||||||||    
T  39329498 accaccct 39329505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 43455537 - 43455632
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  43455537 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 43455632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 13460306 - 13460213
Alignment:
Q  112 tgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||| || ||| | |||||||||| |||||||||||||| |||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacc 13460213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 40217327 - 40217226
Alignment:
Q  116 ctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccacc 215  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||||||||| | |||  ||||||||| || | |||||||||| ||||||||||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaaccacc 40217228  T
Q  216 ct 217  Q
    ||    
T  40217227 ct 40217226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 24397028 - 24396928
Alignment:
Q  117 tatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccc 216  Q
    ||||||| ||| |||||||||||||| ||||||  ||||||||| |||||||  ||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  24397028 tatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgaggaacctcaaactaccc 24396929  T
Q  217 t 217  Q
    |    
T  24396928 t 24396928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 2790747 - 2790842
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||  |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  2790747 aatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 2790842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 32128685 - 32128598
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacat 197  Q
    |||||||||||||  ||| |||||||||||||| ||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||    
T  32128685 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 32128598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 47129088 - 47128993
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | || ||||| ||||||||||||||||||||||    
T  47129088 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 47128993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 48209341 - 48209246
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | ||||||| || ||||||||||||||||| ||||    
T  48209341 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacc 48209246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 15735189 - 15735089
Alignment:
Q  112 tgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaac 211  Q
    |||||||||||| ||| ||||||||||||||||||  |||||||||||     |||||||||  ||||||||| ||||||||||||||||||| ||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatatat-----acaccaaaaaatgaaaatcattaccgtatacatgaggaacttcaaac 15735095  T
Q  212 caccct 217  Q
    ||||||    
T  15735094 caccct 15735089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 16845123 - 16845027
Alignment:
Q  110 aatgttctattta-attttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||||||   |||||| ||  |||||||| ||||||||||||||||||||||    
T  16845123 aatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacc 16845027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 34768580 - 34768675
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| | | |||||||| | ||||||||||||||||||||    
T  34768580 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacc 34768675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 1105632 - 1105538
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| |||||||||||||||||||| ||||||||||||| |||||| | | |||||||| |||||| |||||||||| ||||    
T  1105632 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacc 1105538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 5128852 - 5128945
Alignment:
Q  114 ttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 207  Q
    |||||||||  ||| ||||||||||||||||||||| |||||||||||  | |||| | | |||||||| ||||||||||||||||||||||||    
T  5128852 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctc 5128945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 10428203 - 10428308
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacacc--------aaaatgtgaaaatcactaccgtatacatgagg 201  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| ||||||        ||| ||||||||| ||||||||||||||||||    
T  10428203 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgagg 10428302  T
Q  202 aacctc 207  Q
    ||||||    
T  10428303 aacctc 10428308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 199
Target Start/End: Complemental strand, 37514759 - 37514671
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatga 199  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||  | | |||||||| ||||||||||||||||    
T  37514759 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 40089598 - 40089522
Alignment:
Q  129 ttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||| |||||| |||||||||||| |||| | ||| |||||||| ||||||||||||||||||||||    
T  40089598 ttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 40089522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 54083248 - 54083343
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||| ||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| |||  | ||||| ||||||||||||||||||||||    
T  54083248 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacc 54083343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 32915485 - 32915391
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||| | |||||| | | || ||||| | ||||||||||||||||||||    
T  32915485 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacc 32915391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 35465207 - 35465115
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaa 203  Q
    |||||| ||||||  ||| ||| |||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||    
T  35465207 aatgttatatttatattttttacaagataaataaaaggtg-cgtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaa 35465115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 19498603 - 19498510
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| ||  |||||||| |||| | ||| |||||||| ||||| ||||||||||||||||    
T  19498603 aatgttctatttatattttttaaaagataaatataaggtgccg--tatatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacc 19498510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 16882401 - 16882484
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtat 193  Q
    |||||||||||||   || |||||||||||||| |||||| ||| ||||| || |||||||||| |||||||| ||||||||||    
T  16882401 aatgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 39655260 - 39655334
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatca 184  Q
    |||||||||||||| ||| ||||||||||||||||| ||  || ||||||||| |||||| ||| ||||||||||    
T  39655260 aatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatca 39655334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 51964812 - 51964737
Alignment:
Q  110 aatgttctattta-attttctt--aaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaat 182  Q
    ||||||||||||| ||||| ||  ||||||||||||||||||| ||||||||||||||||||| | | ||||||||    
T  51964812 aatgttctatttatattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaat 51964737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 17679497 - 17679442
Alignment:
Q  114 ttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacacc 169  Q
    |||||||||  ||| ||||||||||||||||||||| |||||||||||| ||||||    
T  17679497 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 17679442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 23508516 - 23508564
Alignment:
Q  110 aatgttctattta-attttcttaaaagataaatacaaggtgtcgtatat 157  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  23508516 aatgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 29425187 - 29425287
Alignment:
Q  117 tatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccc 216  Q
    ||||||| ||| |||||| ||||||| |||||| |||||||||||  ||||   ||| ||||||||  ||||| || ||| ||| |||||||||||||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgcagtacatttaaaggtgaaaattgctaccatacacacgagtaacctcaaaccaccc 29425286  T
Q  217 t 217  Q
    |    
T  29425287 t 29425287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 16922335 - 16922386
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgc 161  Q
    |||||||||||||  ||| |||||||||||||| || |||||||||||||||    
T  16922335 aatgttctatttatattttttaaaagataaatataaagtgtcgtatatatgc 16922386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 23509846 - 23509899
Alignment:
Q  152 gtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||| |||||| | | |||||||| ||||||||| ||||||||||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacc 23509899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 24969484 - 24969443
Alignment:
Q  164 tacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||| ||| |||||||| ||||||||||||||||||||||    
T  24969484 tacacccaaaggtgaaaatgactaccgtatacatgaggaacc 24969443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30599915 - 30599948
Alignment:
Q  1 tcaaattgagggtctccattgtggatggtcttag 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  30599915 tcaaattgagggtctccattgtggatgctcttag 30599948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 24614054 - 24614018
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaag 146  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  24614054 aatgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 34236846 - 34236882
Alignment:
Q  29 tcttagggcacttgttagcatttttcttaaaaataaa 65  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  34236846 tcttagggcacttgttagcattttttttagaaataaa 34236882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 21665707 - 21665814
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||    
T  21665707 aatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgaggaaccacaa 21665806  T
Q  210 accaccct 217  Q
    ||||||||    
T  21665807 accaccct 21665814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 38400893 - 38400786
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||   ||| |||||||||||||||||||||||||||||||||||    
T  38400893 aatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacctcaa 38400794  T
Q  210 accaccct 217  Q
    ||||||||    
T  38400793 accaccct 38400786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 24035552 - 24035659
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||| |||||||||||| ||| |||||||||||||||| |||||||||||| | |||    
T  24035552 aatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgaggaatcgcaa 24035651  T
Q  210 accaccct 217  Q
    ||||||||    
T  24035652 accaccct 24035659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 12134066 - 12134154
Alignment:
Q  129 ttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 217  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  12134066 ttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattaggaacctcaaaccaccct 12134154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 16097103 - 16096998
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||||||   |||||| ||| |||||||| |||||| |||||||||||||||||||    
T  16097103 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacctcaa 16097004  T
Q  210 accacc 215  Q
    ||||||    
T  16097003 accacc 16096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 37182739 - 37182658
Alignment:
Q  136 ataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 217  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacctcaaatcaccct 37182658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 16227379 - 16227482
Alignment:
Q  114 ttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaacca 213  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||| |||||||| | |  |||||||||||||  ||||||| |||||||||||||||    
T  16227379 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataaggaacctcaaacca 16227478  T
Q  214 ccct 217  Q
    ||||    
T  16227479 ccct 16227482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 28425717 - 28425816
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    ||||||||||||||   | |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||| ||||||||||||||    
T  28425717 aatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacctcaa 28425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 29939869 - 29939964
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||| |||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  29939869 aatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 29939964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 13800551 - 13800657
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgataca-ccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    |||||||||||||| ||| |||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||  |||||| |||||||||||    
T  13800551 aatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgaggaacctca 13800650  T
Q  209 aaccacc 215  Q
    || ||||    
T  13800651 aatcacc 13800657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 9046125 - 9046029
Alignment:
Q  110 aatgttctattta-attttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||| ||||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  9046125 aatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 9046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 3155312 - 3155217
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  3155312 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacc 3155217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 24410532 - 24410437
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  24410532 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 24410437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 26716224 - 26716128
Alignment:
Q  110 aatgttctattta-attttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||| ||||| |||||||||||||| |||||| | |||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  26716224 aatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 26716128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 4505989 - 4505894
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | || ||||| ||||||||||||||||||||||    
T  4505989 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 4505894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 6965102 - 6965007
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||| ||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  6965102 aatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 6965007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 11912764 - 11912871
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| |||   |||| |||||||||| ||| ||||||||||| ||||| | |||  |||||||||||||||||||||| |||||||||||    
T  11912764 aatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataaggaacctcaa 11912863  T
Q  210 accaccct 217  Q
    ||||||||    
T  11912864 accaccct 11912871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 12337455 - 12337550
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||||| |||||||| | |||||| | | |||||||| ||||||||||||||||||||||    
T  12337455 aatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 12337550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 7742140 - 7742245
Alignment:
Q  110 aatgttctattta-attttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||| | ||| |||||||  |||| ||||| ||||||||||||||    
T  7742140 aatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgaggaacctca 7742239  T
Q  209 aaccac 214  Q
    ||||||    
T  7742240 aaccac 7742245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 10762572 - 10762667
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| ||||||  ||||||||| | |||||| ||| |||||||| ||||||||||||||||||||||    
T  10762572 aatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 10762667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 8907084 - 8907181
Alignment:
Q  108 gtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||||  ||| ||||||||||||||||||| | |||||||||||| |||||| | | || ||||| ||||||||||||||||| ||||    
T  8907084 gtaatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacc 8907181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 3953100 - 3953006
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||| ||||| |||||| | | |||||||| | |||||||| |||||||||||    
T  3953100 atgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacc 3953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 7162878 - 7162784
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||| || ||  | | |||||||| ||||||||||| ||||||||||    
T  7162878 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacc 7162784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 22727530 - 22727614
Alignment:
Q  131 aaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccacc 215  Q
    ||||||||||||| | ||| |||||||||||| |||||| ||| ||||||||||||||| |||||||||  | ||||||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatgataaccctcaaaccacc 22727614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 40636233 - 40636174
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacacc 169  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| ||||||    
T  40636233 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacc 40636174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 27506747 - 27506841
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaac 204  Q
    |||| ||||||||  ||| |||||||||||||| |||||| |||||||||| | |||||| ||| || ||||| ||||| |||||||||||||||    
T  27506747 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaac 27506841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 11952644 - 11952720
Alignment:
Q  141 tacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 217  Q
    ||||| |||||||||||||| |||||||  | |  ||||||||||||| | ||||||||||||||||||||||||||    
T  11952644 tacaaagtgtcgtatatatgtgatacactcatagatgaaaatcactactgcatacatgaggaacctcaaaccaccct 11952720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 10252511 - 10252396
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtg---tcgtatatatgcgatacaccaaaatgtgaaaatcac-----taccgtatacatgagg 201  Q
    ||||||| |||||| ||| |||||||||||||||||||||   |||||||||| | | ||||| ||| ||||||| |||     || | |||||||||||    
T  10252511 aatgttcaatttaaattttttaaaagataaatacaaggtgtcgtcgtatatatactacacacccaaaggtgaaaaccactatcatatcatatacatgagg 10252412  T
Q  202 aacctcaaaccaccct 217  Q
    ||||||||||||||||    
T  10252411 aacctcaaaccaccct 10252396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 34694070 - 34694011
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacacc 169  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||| | ||||||    
T  34694070 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacc 34694011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 34716482 - 34716423
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacacc 169  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||| | ||||||    
T  34716482 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacc 34716423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 42029240 - 42029166
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatca 184  Q
    |||||||||||||| ||| |||||||||||||| |||||||| |||| |||   |||||| ||| ||||||||||    
T  42029240 aatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaatca 42029166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 5952741 - 5952781
Alignment:
Q  129 ttaaaagataaatacaaggtgtcgtatatatgcgatacacc 169  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  5952741 ttaaaagataaatacaaggtgccgtatatatgcggtacacc 5952781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 37622418 - 37622454
Alignment:
Q  181 atcactaccgtatacatgaggaacctcaaaccaccct 217  Q
    |||||||||||||||| ||||||||||||||||||||    
T  37622418 atcactaccgtatacacgaggaacctcaaaccaccct 37622454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 29694437 - 29694375
Alignment:
Q  147 gtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccac 214  Q
    |||| ||||||| |||||||||| |||||||||||||||     |||||||||| |||||||||||||    
T  29694437 gtgttgtatatacgcgatacacccaaatgtgaaaatcac-----tatacatgagaaacctcaaaccac 29694375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 11952595 - 11952643
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatat 159  Q
    |||||||||||||| ||| ||||||||| ||||||| |||||||||||||    
T  11952595 aatgttctatttaaattttttaaaagat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 15167422 - 15167529
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||||| || |||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  15167422 aatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 15167521  T
Q  210 accaccct 217  Q
    ||||||||    
T  15167522 accaccct 15167529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 41677180 - 41677288
Alignment:
Q  110 aatgttctatttaa-ttttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    |||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||| |||||||||||||||||||    
T  41677180 aatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgaggaacctca 41677279  T
Q  209 aaccaccct 217  Q
    |||||||||    
T  41677280 aaccaccct 41677288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 39332412 - 39332519
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||||||| | ||||||||||||||||||||| |||||| ||| |||| | ||| |||||||||||||||||||||||||||||||||||    
T  39332412 aatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 39332511  T
Q  210 accaccct 217  Q
    ||||||||    
T  39332512 accaccct 39332519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 5721654 - 5721548
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaa 210  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||||  || |||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctcaaa 5721555  T
Q  211 ccaccct 217  Q
    |||||||    
T  5721554 ccaccct 5721548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 5942778 - 5942685
Alignment:
Q  124 ttttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 217  Q
    |||| |||||||||||||||||| |||||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  5942778 tttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 5942685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 15078855 - 15078750
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    |||||||||||||||  || |||||||||||||| ||||||  |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  15078855 taatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctca 15078756  T
Q  209 aaccac 214  Q
    ||||||    
T  15078755 aaccac 15078750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 25561501 - 25561607
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    ||||||||||||||| | | ||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  25561501 taatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacctca 25561598  T
Q  209 aaccaccct 217  Q
    |||||||||    
T  25561599 aaccaccct 25561607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 8103009 - 8102906
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    ||||||| ||||||| ||| |||||||||||||||||||||  ||||||||||| |||||| ||| |||||||||| |||||||||||||||||||||||    
T  8103009 taatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctca 8102910  T
Q  209 aacc 212  Q
    ||||    
T  8102909 aacc 8102906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 7944529 - 7944634
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||| ||||||| ||| |||||| |||||||||||||| ||||||||||   |||||| ||| |||||||||||||||||||||||||||||||||||    
T  7944529 aatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 7944628  T
Q  210 accacc 215  Q
    ||||||    
T  7944629 accacc 7944634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 8646301 - 8646201
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||||| || ||||||||    
T  8646301 aatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc-atacacgcaaatgtgaaaatcactaccgtatacataagaaacctcaa 8646203  T
Q  210 ac 211  Q
    ||    
T  8646202 ac 8646201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 11290280 - 11290175
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||   |||||  ||| |||||||||||||||||||||||||| ||||||||    
T  11290280 aatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaacctcaa 11290181  T
Q  210 accacc 215  Q
    ||||||    
T  11290180 accacc 11290175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 5973114 - 5973219
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||   |||||| | |  ||||||||| ||||||||||| ||||||||||||    
T  5973114 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgaggaacctcaa 5973213  T
Q  210 accacc 215  Q
    ||||||    
T  5973214 accacc 5973219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 34789870 - 34789974
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaa 210  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||||   |||||| ||| |||||||||||||||||||||||||| ||  |||||    
T  34789870 atgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagaaatatcaaa 34789969  T
Q  211 ccacc 215  Q
    |||||    
T  34789970 ccacc 34789974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 23798268 - 23798363
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  23798268 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 23798363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 45475913 - 45475818
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  45475913 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacc 45475818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 14509990 - 14510094
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaa-tcactaccgtatacatgaggaacctca 208  Q
    ||||||| |||||| ||| |||||||| ||||| |||||||||||||||  || |||||| ||||||||||| ||||||||||||||||||| |||||||    
T  14509990 aatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagtaacctca 14510087  T
Q  209 aaccacc 215  Q
    |||||||    
T  14510088 aaccacc 14510094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 23606636 - 23606731
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| || ||||| ||||||||||||||||||||||    
T  23606636 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 23606731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 23941098 - 23941205
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||| ||||||| ||| ||||||||||||||||||||||| |||||| |||||||||| |||  |||||||||| | | |||| | ||||||||||||    
T  23941098 aatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcacaatcatatatacgaggaacctcaa 23941197  T
Q  210 accaccct 217  Q
    ||||||||    
T  23941198 accaccct 23941205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 30883425 - 30883330
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||| ||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  30883425 aatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 30883330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 37430166 - 37430260
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | || ||||| ||||||||||||||||||||||    
T  37430166 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaacc 37430260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 42600887 - 42600783
Alignment:
Q  101 taaaaacgtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgag 200  Q
    |||||| | |||| ||||||||  ||| |||||||||||||| |||||| |||||||||| | |||||| ||| |||||||| |||||||||||||||||    
T  42600887 taaaaaagcaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgag 42600788  T
Q  201 gaacc 205  Q
    |||||    
T  42600787 gaacc 42600783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 2952228 - 2952323
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||| ||| |||||||||||| |||||| | |  ||||||| ||||||||||||||||||||||    
T  2952228 aatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 2952323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 5860751 - 5860846
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| |||||| |||||||||| ||||    
T  5860751 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaacc 5860846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 10917487 - 10917392
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||| ||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| |||||| |||||||||||||||    
T  10917487 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacc 10917392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 13534694 - 13534788
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||||||| || |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  13534694 aatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13534788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 13624234 - 13624328
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||||||| || |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  13624234 aatgttctatttatattttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13624328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 30674410 - 30674485
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcac 185  Q
    |||||||||||||| | | |||||||||||||| |||||||||||||||||||||||||  ||| |||||||||||    
T  30674410 aatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 41879277 - 41879182
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||  |||||||||||| |||| | ||| |||||||| ||||||| ||||||||| ||||    
T  41879277 aatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacc 41879182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 34048712 - 34048821
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgc--gatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 207  Q
    ||||||||||||||   | ||||||||||||||||| |||||||||||||    |||||||| |||  ||||||||||||| ||||||||||||| ||||    
T  34048712 aatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgaggatcctc 34048811  T
Q  208 aaaccaccct 217  Q
    | ||||||||    
T  34048812 ataccaccct 34048821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 3048530 - 3048619
Alignment:
Q  116 ctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | |  ||||||| ||||||||||||| ||||||||    
T  3048530 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaacc 3048619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 34868183 - 34868223
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtg 149  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  34868183 taatgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 9108589 - 9108551
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggt 148  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  9108589 aatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 38547042 - 38547149
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||| | |||||| ||||||||||||||||| | |||||||||||||||||||    
T  38547042 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaacctcaa 38547141  T
Q  210 accaccct 217  Q
    ||||||||    
T  38547142 accaccct 38547149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 45758601 - 45758496
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||| |||||||| |||||||||  ||||| | ||| |||||||||||||||||||||||||||||||||||    
T  45758601 aatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 45758502  T
Q  210 accacc 215  Q
    ||||||    
T  45758501 accacc 45758496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 26804045 - 26803948
Alignment:
Q  117 tatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccc 216  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||||||||||   || |||||||||||||||||||||||||| |||||||||||||||    
T  26804045 tatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaaacctcaaaccaccc 26803949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 27559758 - 27559649
Alignment:
Q  96 taaaataaaaacgtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatac 195  Q
    ||||| ||||| | |||||||||||||  ||| |||||||||||||| ||||||||||||||||||| |||||| ||| |||||||| ||||||||||||    
T  27559758 taaaaaaaaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatac 27559659  T
Q  196 atgaggaacc 205  Q
    ||||||||||    
T  27559658 atgaggaacc 27559649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 39134728 - 39134836
Alignment:
Q  110 aatgttctatttaattttcttaaaa-gataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    |||||||||||||| ||| |||||| |||||||||||||||  |||||||||| ||||||| ||| |||| ||||||||| |||||||||||||||||||    
T  39134728 aatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgaggaacctca 39134827  T
Q  209 aaccaccct 217  Q
    |||||||||    
T  39134828 aaccaccct 39134836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 6221784 - 6221678
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||| ||| |||||||| ||| |||| |||||||||||||||| || |||||| ||||||||||||||    
T  6221784 aatgttctatttaaattt-ttaaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgaggaacctcaa 6221686  T
Q  210 accaccct 217  Q
    ||||||||    
T  6221685 accaccct 6221678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 43235774 - 43235881
Alignment:
Q  110 aatgttctatttaa--ttttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 207  Q
    ||||||||||||||  |||| || ||||||||||||||| |||||||||||||   |||||| ||| ||||||||||||| |||||||||||||||||||    
T  43235774 aatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctc 43235873  T
Q  208 aaaccacc 215  Q
    ||||||||    
T  43235874 aaaccacc 43235881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 5316787 - 5316692
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  5316787 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 5316692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 23185534 - 23185439
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  23185534 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacc 23185439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 33170866 - 33170759
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||| ||||||| ||| ||||||  ||||||||| |||| ||||||||||| |||||||||  |||||||||||||||||||||||||| ||||| ||    
T  33170866 aatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaaccttaa 33170767  T
Q  210 accaccct 217  Q
    ||||||||    
T  33170766 accaccct 33170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 44655848 - 44655753
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||| | | || ||||| ||||||||||||||||||||||    
T  44655848 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 44655753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 40501788 - 40501893
Alignment:
Q  102 aaaaacgtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagg 201  Q
    ||||| |||||| ||||||||  ||| |||||||||||||| ||||||||||||||||||| |||||| ||| || ||||| |||||||||||||||| |    
T  40501788 aaaaaagtaatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaag 40501887  T
Q  202 aacctc 207  Q
    ||||||    
T  40501888 aacctc 40501893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 50881537 - 50881440
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 207  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||| | | | |||||||| ||||| ||||||||||||||||||    
T  50881537 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctc 50881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 6771897 - 6771801
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 207  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||| ||||||||||    
T  6771897 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctc 6771801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 16140161 - 16140069
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaa 203  Q
    ||||||||||||  ||| |||||||||||||||||||||| ||||||||||| |||||| | | |||||||| ||||||||||||||||||||    
T  16140161 atgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaa 16140069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 4971624 - 4971719
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||  |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  4971624 aatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacc 4971719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 9173029 - 9173124
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||| | ||| |||||||| ||||||||||||||||||||||    
T  9173029 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 9173124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 9181011 - 9181106
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||| | ||| |||||||| ||||||||||||||||||||||    
T  9181011 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 9181106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 17169063 - 17168968
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| ||||||| ||||||||||| |||||| ||| |||||||| |||||| |||||||||||||||    
T  17169063 aatgttctatttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacc 17168968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 14146406 - 14146312
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | |  ||||||| ||||||||||||||||||||||    
T  14146406 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 14146312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 38853627 - 38853527
Alignment:
Q  112 tgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaac 211  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||||   || | | ||| ||||||||||||||||||||||||| |||||||||||    
T  38853627 tgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatga-gaacctcaaac 38853529  T
Q  212 ca 213  Q
    ||    
T  38853528 ca 38853527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 1366884 - 1366979
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| |||  ||||||| ||||||||||||| ||||||||    
T  1366884 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacc 1366979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 5027656 - 5027561
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| |||||| |||| ||||||||||    
T  5027656 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacc 5027561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 5533416 - 5533314
Alignment:
Q  114 ttctatttaa-ttttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaacc 212  Q
    |||||||||| |||| |||||||||||| |||||||| ||||||||||   ||||   ||| ||||||||||||||||||||||||||||| ||||||||    
T  5533416 ttctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgaggaaactcaaacc 5533317  T
Q  213 acc 215  Q
    |||    
T  5533316 acc 5533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 19955824 - 19955729
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||| ||||||||  ||| |||||||||||||| |||||  |||||||||||| |||||| ||| |||||||| ||||||||||| ||||||||||    
T  19955824 aatgatctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacc 19955729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 51607445 - 51607540
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtc-gtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaac 204  Q
    |||||| ||||||  ||| |||||||||||||| |||||| | ||||||||||| |||||| ||| |||||||| |||||||||||||||||||||    
T  51607445 aatgttttatttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaac 51607540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 3406524 - 3406430
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||  |||||    | |||||||| ||||||||||||||||||||||    
T  3406524 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacc 3406430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 3440296 - 3440390
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||  |||||    | |||||||| ||||||||||||||||||||||    
T  3440296 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacc 3440390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 21740943 - 21741029
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtataca 196  Q
    ||||||||||||   ||| ||||||||||||||||||||| ||||||||||||||||||| | | |||||||| |||||| ||||||    
T  21740943 aatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 41697144 - 41697238
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||| || ||||||||||||  |||| | | | |||||||| ||||||||||||||||||||||    
T  41697144 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacc 41697238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 10925979 - 10926067
Alignment:
Q  129 ttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 217  Q
    |||||| |||||||||| ||| |||||||||| ||| || | |||  ||||||||||||||||||||||||||| ||||||| ||||||    
T  10925979 ttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgaggatcctcaaatcaccct 10926067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 50146403 - 50146307
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacct 206  Q
    ||||||||||||||  || || |||||||||| ||||||| ||| |||||| |||| ||| ||| || ||||||| |||| ||||||||||||||||    
T  50146403 aatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgaggaacct 50146307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 205
Target Start/End: Original strand, 13913477 - 13913583
Alignment:
Q  101 taaaaacgtaatgttctatttaattttcttaaaagataaatacaaggtgtcg--tatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatg 198  Q
    |||||| | |||| ||||||||  ||| |||||||||||||| ||| || ||  |||||||||| |||||| ||| |||||||| |||||||||||||||    
T  13913477 taaaaaagcaatgatctatttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatg 13913576  T
Q  199 aggaacc 205  Q
    || ||||    
T  13913577 agaaacc 13913583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 35392377 - 35392295
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgta 192  Q
    ||||||| ||||||| ||| ||||  ||||||||||||||| |||||||||||| || | | ||| ||||||||||||||||||    
T  35392377 taatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 6889718 - 6889661
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgataca 167  Q
    |||||||||||||  ||| ||||||||||||||||| || ||||||||||||| ||||    
T  6889718 aatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 6889661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 6891564 - 6891507
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgataca 167  Q
    |||||||||||||  ||| ||||||||||||||||| || ||||||||||||| ||||    
T  6891564 aatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 6891507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 3831384 - 3831348
Alignment:
Q  25 atggtcttagggcacttgttagcatttttcttaaaaa 61  Q
    |||| ||||||||||||||||||||||||||||||||    
T  3831384 atggccttagggcacttgttagcatttttcttaaaaa 3831348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 43177790 - 43177758
Alignment:
Q  7 tgagggtctccattgtggatggtcttagggcac 39  Q
    ||||||||||||||||||||| |||||||||||    
T  43177790 tgagggtctccattgtggatgctcttagggcac 43177758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 206496 - 206597
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctcaa 206595  T
Q  210 ac 211  Q
    ||    
T  206596 ac 206597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 173517 - 173620
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||    
T  173517 aatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctcaa 173616  T
Q  210 acca 213  Q
    ||||    
T  173617 acca 173620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 7398547 - 7398440
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| || |||||||||||||||||| | |||||||| |||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  7398547 aatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgaggaacctcaa 7398448  T
Q  210 accaccct 217  Q
    ||||||||    
T  7398447 accaccct 7398440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 23859170 - 23859062
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    ||||||||||||||| ||| ||||||||||||||||| ||  ||||||||||||||||||| |||  ||||||| ||||||||||||||||||| |||||    
T  23859170 taatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatcctca 23859071  T
Q  209 aaccaccct 217  Q
    |||||||||    
T  23859070 aaccaccct 23859062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 27237429 - 27237536
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||  | | ||| ||||||||||||| |||||||||||||||||||||    
T  27237429 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgaggaacctcaa 27237528  T
Q  210 accaccct 217  Q
    ||||||||    
T  27237529 accaccct 27237536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 29077316 - 29077221
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||||||    
T  29077316 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacc 29077221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 2611268 - 2611369
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||  ||  ||||||||||| || ||||||||||||||||||||    
T  2611268 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgaggaacctcaa 2611367  T
Q  210 ac 211  Q
    ||    
T  2611368 ac 2611369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 9021812 - 9021912
Alignment:
Q  116 ctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccacc 215  Q
    |||||||| ||| ||||||||||||||||| ||| |||||||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  9021812 ctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagg-acctcaaaccacc 9021910  T
Q  216 ct 217  Q
    ||    
T  9021911 ct 9021912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 6765687 - 6765794
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||| ||  |||| | ||| |||||||||||||||||||| | ||| ||||||||    
T  6765687 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagtaacctcaa 6765786  T
Q  210 accaccct 217  Q
    ||||||||    
T  6765787 accaccct 6765794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 12981422 - 12981315
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||||||| ||||||||||||||||||||  | |||||| ||| |||||  ||| |||||||||||||| ||||| ||||||||||||||    
T  12981422 aatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacctcaa 12981323  T
Q  210 accaccct 217  Q
    ||||||||    
T  12981322 accaccct 12981315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 20153298 - 20153190
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    ||||||| ||||||| ||| ||||||||||||||||| |||| |||||||||||||| ||| |||  ||||||||||| |||||||||||||| | ||||    
T  20153298 taatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagggatctca 20153199  T
Q  209 aaccaccct 217  Q
    |||||||||    
T  20153198 aaccaccct 20153190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 18776772 - 18776867
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | |||||||||| ||||||||||||||||| ||||    
T  18776772 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacc 18776867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 48983850 - 48983945
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||| ||||||||  ||| |||||||||||||| ||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  48983850 aatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacc 48983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 21763595 - 21763672
Alignment:
Q  112 tgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactacc 189  Q
    |||||||||||| ||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  21763595 tgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactacc 21763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 23551076 - 23551172
Alignment:
Q  110 aatgttctattta-attttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||| |||||||| ||||| |||||||||||||| ||||||||||||||||||| |||| | ||| |||||||| ||||||||||||||||||||||    
T  23551076 aatgatctatttatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 23551172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 36891675 - 36891571
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    ||||||||||||||  ||| ||||| ||| ||||||| |||| |||||||| || |||| | ||| ||||||||||||||||||||||||||||||||||    
T  36891675 taatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctca 36891576  T
Q  209 aacca 213  Q
    |||||    
T  36891575 aacca 36891571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 8171545 - 8171640
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | |  ||||||| ||||||||||||||||||||||    
T  8171545 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 8171640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 20091287 - 20091382
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||| ||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  20091287 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 20091382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 24525691 - 24525786
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| ||| |||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  24525691 aatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 24525786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 38971330 - 38971255
Alignment:
Q  129 ttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaac 204  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| ||| |||||||    
T  38971330 ttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 205
Target Start/End: Original strand, 47984966 - 47985071
Alignment:
Q  101 taaaaacgtaatgttctattta-attttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatga 199  Q
    |||||| | ||||||||||||| ||||| |||||||| ||||| |||||| |||||||||||| |||||| ||| |||||||| || |||||||||||||    
T  47984966 taaaaaagcaatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatga 47985065  T
Q  200 ggaacc 205  Q
    ||||||    
T  47985066 ggaacc 47985071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 10955579 - 10955485
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||  | | |||||||| ||||||||||||||||||||||    
T  10955579 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacc 10955485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 36902930 - 36903022
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagga 202  Q
    |||||||||||||| ||| |||| ||||||||||||| |||||||||||||   |||||| ||| |||||||||| ||| |||||||||||||    
T  36902930 aatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 12419501 - 12419608
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||||||||| ||  | ||||| || |||||| | |||  ||||||||||||  | ||||||||||||||||||    
T  12419501 aatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgaggaacctcaa 12419600  T
Q  210 accaccct 217  Q
    ||||||||    
T  12419601 accaccct 12419608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 19692190 - 19692095
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| | |||||||||| |||||| ||| |||||||| |||  |||||||||||||||||    
T  19692190 aatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaacc 19692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 12596294 - 12596388
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| || |||||||||||||||||| |||||||||| | |||||| | | |||||||| |||||||||| |||||||||||    
T  12596294 atgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacc 12596388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 8239785 - 8239688
Alignment:
Q  108 gtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||||  ||| |||||| ||||||| || ||| |||||||||| | |||||| |||||||||||| | ||||||||| ||||||||||    
T  8239785 gtaatgttctatttatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacc 8239688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 23020509 - 23020589
Alignment:
Q  129 ttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaa 210  Q
    |||||||||||||| ||||||| |||||||||| | ||||  ||| |||||||||||||||||||||||||||||| |||||    
T  23020509 ttaaaagataaatataaggtgttgtatatatgc-acacactcaaaggtgaaaatcactaccgtatacatgaggaacttcaaa 23020589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 23744892 - 23744808
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtata 194  Q
    ||||||||| |||| ||| ||||||||||||||||||||| || ||||||||| |||||| |||  | |||||||||||||||||    
T  23744892 aatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 38414901 - 38414977
Alignment:
Q  129 ttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||| |||||| |||||||||| | |||||| ||| |||||||| ||||| ||||||||||||||||    
T  38414901 ttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacc 38414977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 10329416 - 10329511
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||| |  | ||| ||| |||||||| ||||||||||||||||| ||||    
T  10329416 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacc 10329511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 18201233 - 18201126
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||| ||||||||| ||| |||||| ||||||||||| || | |||||||| | |||||| ||  |||||||||  |||| || ||||||||||||||||    
T  18201233 aatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacctcaa 18201134  T
Q  210 accaccct 217  Q
    ||||||||    
T  18201133 accaccct 18201126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 28749801 - 28749715
Alignment:
Q  114 ttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagg 201  Q
    |||||||||  ||| | ||||||||||||||||||| |||||||||||| |||||  | |||||||||| ||||||||||||||||||    
T  28749801 ttctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 9014782 - 9014875
Alignment:
Q  117 tatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccc 216  Q
    ||||||| |||  |||||||||||||||| |||||||||||||       ||| ||| |||||||||||||||||||||||||| ||||||||| |||||    
T  9014782 tatttaaattttgtaaaagataaatacaatgtgtcgtatatat-------acccaaaggtgaaaatcactaccgtatacatgagtaacctcaaatcaccc 9014874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 26254089 - 26254017
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaat 182  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| |||  |||||||    
T  26254089 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 33162345 - 33162417
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaat 182  Q
    |||| ||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| ||| ||||||||    
T  33162345 aatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaat 33162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 17800257 - 17800332
Alignment:
Q  140 atacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccacc 215  Q
    ||||||| |||||||||||||   |||||| ||| ||||||||||||||||||| |||||||||  ||||||||||    
T  17800257 atacaagttgtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaatttcaaaccacc 17800332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 26917727 - 26917788
Alignment:
Q  124 ttttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcac 185  Q
    |||| |||||||| ||||||||| || |||||||||| |||||| | |||||||||||||||    
T  26917727 tttttttaaaagaaaaatacaagatgacgtatatatgtgatacatctaaatgtgaaaatcac 26917788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30833583 - 30833539
Alignment:
Q  1 tcaaattgagggtctccattgtggatggtcttagggcacttgtta 45  Q
    |||| |||||||||||||||||||||  |||||||||||||||||    
T  30833583 tcaatttgagggtctccattgtggatactcttagggcacttgtta 30833539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 9014184 - 9014233
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatat 159  Q
    |||||| ||||||| ||| ||||||||||||||||| |||| ||||||||    
T  9014184 aatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 25010475 - 25010434
Alignment:
Q  164 tacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||| ||| |||||||| ||||||||||||||||||||||    
T  25010475 tacacccaaaggtgaaaatgactaccgtatacatgaggaacc 25010434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 1451 - 1346
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    |||||||||||||||  || |||||||||||||| ||||||  |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  1451 taatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctca 1352  T
Q  209 aaccac 214  Q
    ||||||    
T  1351 aaccac 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 8073343 - 8073440
Alignment:
Q  108 gtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  8073343 gtaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 8073440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 8420426 - 8420320
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||||||||||   |||||| |||||||||||||||| ||||||| | |||||||||||    
T  8420426 taatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacctca 8420327  T
Q  209 aaccacc 215  Q
    |||||||    
T  8420326 aaccacc 8420320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 26279641 - 26279532
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcact--accgtatacatgaggaacctc 207  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||||||||| ||||||| |||  |||||||||||  ||  |||||||||||||||||    
T  26279641 aatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactacacattatacatgaggaacctc 26279542  T
Q  208 aaaccaccct 217  Q
    ||||||||||    
T  26279541 aaaccaccct 26279532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 47467782 - 47467688
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| ||||||||||||||||||| | | |||||||| ||||||||||||||||||||||    
T  47467782 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacc 47467688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 54574834 - 54574941
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| | |||| |||||||||||||  |||||||||||| |||||| ||| || |||||||||||| |||||||||||||||||||    
T  54574834 aatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacctcaa 54574933  T
Q  210 accaccct 217  Q
    ||| ||||    
T  54574934 accgccct 54574941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 54619210 - 54619305
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  54619210 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 54619305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 21582870 - 21582775
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||| ||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  21582870 aatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21582775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 25855520 - 25855414
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||||||||   | |||| |||  ||||||||||||||||||||| || |||||||||    
T  25855520 aatgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaagaacctcaa 25855422  T
Q  210 accaccct 217  Q
    ||||||||    
T  25855421 accaccct 25855414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 28689368 - 28689475
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| |||   ||||||||||||||||||| ||||||||||||||| | | ||| |||||||||||| ||||||||||||| || |||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaatctcaa 28689467  T
Q  210 accaccct 217  Q
    || |||||    
T  28689468 actaccct 28689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 34290643 - 34290738
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||||| ||| |||||||| ||||||||||| ||||||||||    
T  34290643 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacc 34290738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 44708576 - 44708481
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| ||||||||| || |||||| ||| |||||||| ||||||||||||||||||||||    
T  44708576 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 44708481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 32319161 - 32319263
Alignment:
Q  109 taatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 208  Q
    ||||||||||||||| ||| ||||||||||||||||| |||| ||||||||||| |||||| ||| |||||||| |||| | |||| | |||||||||||    
T  32319161 taatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacctca 32319260  T
Q  209 aac 211  Q
    |||    
T  32319261 aac 32319263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 42453503 - 42453403
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    ||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||       || |||||||||||||||||||||    
T  42453503 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaa 42453411  T
Q  210 accaccct 217  Q
    ||||||||    
T  42453410 accaccct 42453403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 3953903 - 3953998
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||| |  |||||||||||||||||||    
T  3953903 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacc 3953998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 43207245 - 43207339
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||| | ||| |||||||| ||||||||||||||||||||||    
T  43207245 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatc-aaaggtgaaaatgactaccgtatacatgaggaacc 43207339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 53506891 - 53506986
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| |||||  |||||||||||| |||||| ||| |||||||| ||||||||||||||||| ||||    
T  53506891 aatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 53506986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 204
Target Start/End: Complemental strand, 37168466 - 37168372
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaac 204  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||| | || ||| ||| |||||||| |||||||||||||||||||||    
T  37168466 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaac 37168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 42098899 - 42098805
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||| || ||  | | |||||||| ||||||||||||||||||||||    
T  42098899 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacc 42098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 790031 - 789930
Alignment:
Q  114 ttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaacca 213  Q
    |||||||||| ||| |||||  |||||||||||||||| ||||||||   |||||| ||| || |||||||| ||| |||||||||||||||||||||||    
T  790031 ttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgaggaacctcaaacca 789932  T
Q  214 cc 215  Q
    ||    
T  789931 cc 789930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 38681100 - 38681193
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaa 203  Q
    |||||||||||||  ||| ||||||||||||||||||||| ||||| |||||| |||| | | | |||||||| ||||||||||||||||||||    
T  38681100 aatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaa 38681193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 49393188 - 49393085
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||| ||||| ||| ||||||||||||||||||| |||||||||||| | |||||| ||| || ||||| |||||||||||||||| |||||||||    
T  49393188 aatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatgtg-tacacccaaaggtaaaaattactaccgtatacatga-gaacctcaa 49393091  T
Q  210 accacc 215  Q
    | ||||    
T  49393090 atcacc 49393085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 52374755 - 52374650
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| ||   | |||||||||| |||||||||| |||||||||| | ||| | ||||||||||||||||||||||| ||||||||     
T  52374755 aatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaagaacctcat 52374656  T
Q  210 accacc 215  Q
    ||||||    
T  52374655 accacc 52374650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 205
Target Start/End: Original strand, 27078567 - 27078671
Alignment:
Q  101 taaaaacgtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgag 200  Q
    |||||| | |||||||||||||  ||| ||||||||||||||||| ||| |||||||||||| || ||| | | |||||||| |||||||||||||||||    
T  27078567 taaaaaagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27078666  T
Q  201 gaacc 205  Q
     ||||    
T  27078667 aaacc 27078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 205
Target Start/End: Original strand, 27084364 - 27084468
Alignment:
Q  101 taaaaacgtaatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgag 200  Q
    |||||| | |||||||||||||  ||| ||||||||||||||||| ||| |||||||||||| || ||| | | |||||||| |||||||||||||||||    
T  27084364 taaaaaagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27084463  T
Q  201 gaacc 205  Q
     ||||    
T  27084464 aaacc 27084468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 197
Target Start/End: Original strand, 54407165 - 54407252
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacat 197  Q
    |||||||||||||  ||| |||||||||||||| |||||| |||||||||||| |||| | ||| |||||||| ||||||||||||||    
T  54407165 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 53149322 - 53149416
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||  | |  | ||||| ||||||||||||||||||||||    
T  53149322 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacc 53149416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 18372582 - 18372485
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatat----gcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaa 203  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||    ||| |||||  | | |||||||| ||||||||||||||||||||    
T  18372582 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaa 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 36606064 - 36605973
Alignment:
Q  110 aatgttctattta-attttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagg 201  Q
    ||||||||||||| ||||| | ||||||||||||||||||| |||||||||||| |||||| | |  ||||||| ||||||||||||||||||    
T  36606064 aatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 9878698 - 9878789
Alignment:
Q  114 ttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||  ||| |||||||||||||| ||||||  ||||||||||| |||||| ||| |||||||| |||| ||||||||| |||||||    
T  9878698 ttctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacataaggaacc 9878789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 36716032 - 36716123
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgagg 201  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||| |||||| | | |||||||  || ||||||||| |||||    
T  36716032 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagg 36716123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 50939240 - 50939335
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||| ||||||||  ||| |||||||||||||| |||||| |||||||||  | |||||| ||| || ||||| ||||||||||||||||||||||    
T  50939240 aatgatctatttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 50939335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 50258631 - 50258689
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacacc 169  Q
    ||||||||||||  ||| |||||| ||||||||||||||||||||||||||| ||||||    
T  50258631 atgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacc 50258689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 29598179 - 29598103
Alignment:
Q  136 ataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaacca 213  Q
    |||||||||||||  |||||||||| |||||||  |||  ||||| |||||||||||||||||||||| |||||||||    
T  29598179 ataaatacaaggttccgtatatatgtgatacactcaaagatgaaa-tcactaccgtatacatgaggaatctcaaacca 29598103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 29620423 - 29620490
Alignment:
Q  138 aaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||| |||||||||||| || | | | | |||||||| ||||||||||||||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacc 29620490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  114 ttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgataca 167  Q
    |||||||||  ||| ||||||||||||||||| |||||||||||||||| ||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 42760553 - 42760517
Alignment:
Q  1 tcaaattgagggtctccattgtggatggtcttagggc 37  Q
    |||||||||||||| |||||||||||| |||||||||    
T  42760553 tcaaattgagggtcaccattgtggatgttcttagggc 42760517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 24004 - 24107
Alignment:
Q  114 ttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaacca 213  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||||| ||| ||||| |||||||||    
T  24004 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataaggaatctcaaacca 24103  T
Q  214 ccct 217  Q
    ||||    
T  24104 ccct 24107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 230866 - 230973
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaa 209  Q
    |||||||||||||| ||| |||||||||||||  ||||||| |||||||||||||| ||| ||| ||||||||||||||| |||||||||||||| ||||    
T  230866 aatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgaggaacttcaa 230965  T
Q  210 accaccct 217  Q
    ||||||||    
T  230966 accaccct 230973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 106634 - 106539
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||||  ||| |||||||||||||| ||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||    
T  106634 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 106539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 1437 - 1344
Alignment:
Q  112 tgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 205  Q
    |||||||||||  ||| |||||||||||||||||| || |||||||||||| |||||| | |  ||||||| ||||||||||||||||||||||    
T  1437 tgttctatttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 40183 - 40076
Alignment:
Q  110 aatgttctatttaattttctt--aaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 207  Q
    |||||||||||||||||| ||  ||||||||||||||||||| ||||| ||||   ||||||  || ||||||||||| | |||||||||||| ||||||    
T  40183 aatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctc 40084  T
Q  208 aaaccacc 215  Q
    ||||||||    
T  40083 aaaccacc 40076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 138243 - 138136
Alignment:
Q  110 aatgttctatttaattttctt--aaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctc 207  Q
    |||||||||||||||||| ||  ||||||||||||||||||| ||||| ||||   ||||||  || ||||||||||| | |||||||||||| ||||||    
T  138243 aatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctc 138144  T
Q  208 aaaccacc 215  Q
    ||||||||    
T  138143 aaaccacc 138136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 16095 - 16016
Alignment:
Q  138 aaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 217  Q
    ||||||||| |||||||| |||||| |||| | |||  ||||||||||||||||||||||||| ||||||||||||||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacctcaaaccaccct 16016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Complemental strand, 16161 - 16123
Alignment:
Q  110 aatgttctatttaattttcttaaaagataaatacaaggt 148  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  16161 aatgttctatttaaattttttaaaagataaatacaaggt 16123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 351360 - 351445
Alignment:
Q  129 ttaaaagataaatacaaggtgtcgtatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccac 214  Q
    ||||||||||||||||||||||||||||||||   |||||| ||| ||||||||| |||| | ||||| |||| ||||||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctactgaatacacgaggtacctcaaaccac 351445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 183155 - 183106
Alignment:
Q  111 atgttctatttaattttcttaaaagataaatacaaggtgtcgtatatatg 160  Q
    ||||||||||||  ||| ||||||||||||||||| || |||||||||||    
T  183155 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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