View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9751_low_73 (Length: 243)
Name: NF9751_low_73
Description: NF9751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9751_low_73 |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 766583 - 766810
Alignment:
| Q |
1 |
cgatggacaatctcacacaatcatttatttgttattttggtggccattagatcgagatcaaatagtttagatttcaaactcgacttttggatttaaaaga |
100 |
Q |
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| T |
766583 |
cgatggacaatctcacacaatcatttatttgttattttggtggccattagatcaagatcaaatagtttagatttcaaactcgacttttggatttaaaaga |
766682 |
T |
|
| Q |
101 |
aaaat-aaaatcatgtaatgaaatctgaattgtttgatcttgatctagcagggatcagttgtgagtgtaggcaatccaaatccttcctatataacaatgc |
199 |
Q |
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||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
766683 |
aaaatcaaaatcatataatgaaatctgaattgtttgatcttgatctagcagggatcacttgtgagtgtaggcaatccaaatccttcctatataacaatgc |
766782 |
T |
|
| Q |
200 |
tactacaaaattactactacacataaat |
227 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
766783 |
tactacaaaattactactacacataaat |
766810 |
T |
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