View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9751_low_76 (Length: 241)
Name: NF9751_low_76
Description: NF9751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9751_low_76 |
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Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 3831386 - 3831608
Alignment:
| Q |
1 |
caacccataaacatcttagttttcttaaccgtgacatgacagaaaaaccaaacaaattagagaagccatttctatattgcaatgaggtattacaacatga |
100 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
3831386 |
caacccataaacatcttagttttgttaaccgtgacatgacagaaaaaccaaacaaattagagaagccatttctatattgcactgaggtattacaacatga |
3831485 |
T |
|
| Q |
101 |
tacaaagttattacatcaaaaacataccttaacataagtttccatcattatgaggtacaattcatttgaaggatcctatataaaacaggaaacactttgt |
200 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
3831486 |
tacaaagttattacatcaaaaatataccttaacataagtttccatcattatgcggtacatttcatttgaaggatcctatataaaacaggaaacactttgt |
3831585 |
T |
|
| Q |
201 |
taagcataatttttacaagtcaa |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
3831586 |
taagcataatttttacaagtcaa |
3831608 |
T |
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