View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9751_low_84 (Length: 227)
Name: NF9751_low_84
Description: NF9751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9751_low_84 |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 25467397 - 25467177
Alignment:
| Q |
1 |
attcatcgtttcacagtcgcatcaatggcggttaacgccgatcgcttccatgattcaaaccctaaaacttgcgttgttttaggcggaagaggattcatcg |
100 |
Q |
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| T |
25467397 |
attcatcgtttcacagtcgcatcaatggctgttaacgccgatcgcttccaagattcaaaccctaaaacttgcgttgttttaggcggaagaggattcatcg |
25467298 |
T |
|
| Q |
101 |
gaaaatcattagtcttacagctcttgaaactcggtaactggatcgtccgaatcgccgattccactcactctctcaaccttcaccactccgaatctctcct |
200 |
Q |
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| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25467297 |
ggaaatcattagtcttacagctcttgaaactcggaaactggatcgtccgaatcgccgattccactcactctctcaaccttcaccactccgaatctctcct |
25467198 |
T |
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| Q |
201 |
cgctgaagctctctctgcttc |
221 |
Q |
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|||||||||||||||| |||| |
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| T |
25467197 |
cgctgaagctctctcttcttc |
25467177 |
T |
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