View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9751_low_9 (Length: 519)

Name: NF9751_low_9
Description: NF9751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9751_low_9
NF9751_low_9
[»] chr4 (13 HSPs)
chr4 (83-501)||(49385354-49385770)
chr4 (1-45)||(56088097-56088141)
chr4 (1-39)||(13276128-13276166)
chr4 (1-39)||(29908055-29908093)
chr4 (1-39)||(29910460-29910498)
chr4 (1-39)||(44221446-44221484)
chr4 (1-39)||(51465336-51465374)
chr4 (1-39)||(56497632-56497670)
chr4 (1-38)||(19908692-19908729)
chr4 (1-46)||(56309324-56309369)
chr4 (1-37)||(8415519-8415555)
chr4 (1-37)||(27537749-27537785)
chr4 (1-37)||(45029629-45029665)
[»] chr2 (15 HSPs)
chr2 (399-495)||(6507734-6507830)
chr2 (1-39)||(2429015-2429053)
chr2 (1-43)||(2434934-2434976)
chr2 (1-39)||(2661072-2661110)
chr2 (1-39)||(7640657-7640695)
chr2 (1-39)||(8387909-8387947)
chr2 (1-39)||(15770789-15770827)
chr2 (1-51)||(31815911-31815961)
chr2 (1-39)||(32091195-32091233)
chr2 (1-43)||(37320541-37320583)
chr2 (1-38)||(4897543-4897580)
chr2 (1-38)||(4944937-4944974)
chr2 (1-38)||(18324918-18324955)
chr2 (1-38)||(36264503-36264540)
chr2 (1-37)||(26133544-26133580)
[»] chr1 (14 HSPs)
chr1 (254-302)||(40001303-40001351)
chr1 (1-39)||(45481492-45481530)
chr1 (1-39)||(9639841-9639879)
chr1 (1-39)||(18521246-18521284)
chr1 (1-35)||(26525560-26525594)
chr1 (1-39)||(30003200-30003238)
chr1 (1-43)||(47719131-47719173)
chr1 (1-39)||(49875623-49875661)
chr1 (1-38)||(28039884-28039921)
chr1 (2-39)||(28053266-28053303)
chr1 (1-38)||(36467049-36467086)
chr1 (1-38)||(45224303-45224340)
chr1 (1-41)||(10489800-10489840)
chr1 (1-45)||(15803261-15803305)
[»] scaffold0533 (1 HSPs)
scaffold0533 (1-39)||(8875-8913)
[»] chr5 (10 HSPs)
chr5 (1-39)||(39914900-39914938)
chr5 (1-39)||(3955545-3955583)
chr5 (1-39)||(13906708-13906746)
chr5 (1-39)||(34702489-34702527)
chr5 (1-39)||(42515806-42515844)
chr5 (1-38)||(22498942-22498979)
chr5 (6-39)||(36822344-36822377)
chr5 (1-38)||(40056614-40056651)
chr5 (1-37)||(16752526-16752562)
chr5 (1-37)||(43108570-43108606)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-45)||(25382-25426)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-41)||(34912-34952)
[»] chr8 (7 HSPs)
chr8 (1-45)||(10601756-10601800)
chr8 (4-43)||(34420889-34420928)
chr8 (1-39)||(9241014-9241052)
chr8 (1-38)||(56828-56865)
chr8 (1-46)||(17704005-17704050)
chr8 (1-37)||(7968964-7969000)
chr8 (1-37)||(35889664-35889700)
[»] chr3 (8 HSPs)
chr3 (1-37)||(5135082-5135118)
chr3 (1-39)||(17588361-17588399)
chr3 (1-39)||(26973360-26973398)
chr3 (1-39)||(28130958-28130996)
chr3 (1-39)||(47377373-47377411)
chr3 (4-49)||(8127452-8127497)
chr3 (1-37)||(7961756-7961792)
chr3 (1-37)||(21914095-21914131)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1-39)||(15954-15992)
[»] chr7 (6 HSPs)
chr7 (1-39)||(20103478-20103516)
chr7 (1-39)||(22062437-22062475)
chr7 (1-39)||(28012638-28012676)
chr7 (1-41)||(1398421-1398461)
chr7 (3-43)||(27159694-27159734)
chr7 (1-37)||(28735256-28735292)
[»] chr6 (4 HSPs)
chr6 (1-39)||(7083016-7083054)
chr6 (1-39)||(8629720-8629758)
chr6 (1-39)||(11713665-11713703)
chr6 (1-39)||(32524444-32524482)
[»] scaffold0027 (1 HSPs)
scaffold0027 (3-43)||(61596-61636)


Alignment Details
Target: chr4 (Bit Score: 371; Significance: 0; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 83 - 501
Target Start/End: Original strand, 49385354 - 49385770
Alignment:
Q  83 taattttaaagactaaaatatgatctagtagccnnnnnnnnntgtccttttccttctctccatgataagtcactgtctttaaaagacccctcaaaaacca 182  Q
    |||||||||||||||||||||||||||||||||         |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49385354 taattttaaagactaaaatatgatctagtagccaaagaaaa-tgtctttttccttctctccatgataagtcactgtctttaaaagacccctcaaaaacca 49385452  T
Q  183 aacttcttccattctccatccatcatcataagtcataacataaccattcttaccttctgcagcctcattattcaatccatattttctttgccattttctc 282  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49385453 aacttcttc-attctccatccatcatcacaagtcataacataaccattcttaccttctgcagcctcattattcaatccatattttctttgccattttctc 49385551  T
Q  283 agccatgtcaacctctaaaaagatcacatcagattcatctttcaaaggatatcatgaaacaaatcaaacacaaatgtgtctgtctctacttcaaagaaac 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49385552 agccatgtcaacctctaaaaagatcacatcagattcatctttcaaaggatatcatgaaacaaatcaaacacaaatgtgtctgtctctacttcaaagaaac 49385651  T
Q  383 acaaacacatcacctagtggtgaaaaaagaggaagaaggaaacaatcagaaccaggaaggtttcttggtgttaggagaagaccttggggtagatatgctg 482  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49385652 acaaacacatcacctagtggtgaaaaaagaggaagaaggaaacaatcagaaccaggaaggtttcttggtgttaggagaagaccttggggtagatatgctg 49385751  T
Q  483 ctgaaattagagaccctac 501  Q
    |||||||||||||||||||    
T  49385752 ctgaaattagagaccctac 49385770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 56088097 - 56088141
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtggata 45  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||    
T  56088097 atattatgtattgtccttaccaattgagctaagctcacgtggata 56088141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13276166 - 13276128
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  13276166 atattatgcattgtccctaccaattgagttaagctcacg 13276128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29908093 - 29908055
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  29908093 atattatgcattgtccttaccaactgagttaagctcacg 29908055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29910498 - 29910460
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  29910498 atattatgcattgtccttatcaattgagttaagctcacg 29910460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44221484 - 44221446
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  44221484 atattatgcattgtccataccaactgaattaagctcacg 44221446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51465374 - 51465336
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  51465374 atattatgcattgtccataccaactgaattaagctcacg 51465336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 56497632 - 56497670
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  56497632 atattatgcattgtccttaccaattgagctaagctcacg 56497670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19908729 - 19908692
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  19908729 atattatgcattgtccttaccaactgagttaagctcac 19908692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 56309324 - 56309369
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtggatat 46  Q
    |||||||||||||||| || ||||||| ||||||||||| ||||||    
T  56309324 atattatgcattgtccatatcaattgagttaagctcacgaggatat 56309369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8415519 - 8415555
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    |||||||||||||||| |||||| |||||||||||||    
T  8415519 atattatgcattgtccataccaactgaattaagctca 8415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27537785 - 27537749
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    |||||||||||||||| |||||||||| |||||||||    
T  27537785 atattatgcattgtccataccaattgagttaagctca 27537749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 45029629 - 45029665
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  45029629 atattatgcattgtccttaccaaatgagttaagctca 45029665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 6e-26; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 399 - 495
Target Start/End: Complemental strand, 6507830 - 6507734
Alignment:
Q  399 gtggtgaaaaaagaggaagaaggaaacaatcagaaccaggaaggtttcttggtgttaggagaagaccttggggtagatatgctgctgaaattagaga 495  Q
    |||| ||||||||||| ||||  || ||| |||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6507830 gtggcgaaaaaagaggcagaaaaaagcaagcagaaccaggtaagtttcttggtgtaaggagaagaccttggggtagatatgctgctgaaattagaga 6507734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2429053 - 2429015
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  2429053 atattatgcattgtccttaccaactgaactaagctcacg 2429015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2434934 - 2434976
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtgga 43  Q
    |||||||||||||||||| |||| |||| ||||||||||||||    
T  2434934 atattatgcattgtccttcccaactgaactaagctcacgtgga 2434976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2661072 - 2661110
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  2661072 atattatgcattgtccttaccaactgagttaagctcacg 2661110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7640695 - 7640657
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  7640695 atattatgtattgtccttaccaattgagttaagctcacg 7640657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8387909 - 8387947
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  8387909 atattatgcattgtccttaccaattgagttaaactcacg 8387947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15770827 - 15770789
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  15770827 atattatgcattgtccataccaattgaactaagctcacg 15770789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31815911 - 31815961
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtggatataattt 51  Q
    |||||||||||||||| |||||| ||| ||||||||||| | |||||||||    
T  31815911 atattatgcattgtccctaccaactgagttaagctcacgagaatataattt 31815961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32091195 - 32091233
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  32091195 atattatgcattttccttaccaattgagttaagctcacg 32091233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37320541 - 37320583
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtgga 43  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||    
T  37320541 atattatgcattgtctttaccaactgagttaagctcacgtgga 37320583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4897580 - 4897543
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  4897580 atattatgcattgtccttaccaactgagttaagctcac 4897543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4944974 - 4944937
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  4944974 atattatgcattgtccttaccaactgagttaagctcac 4944937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18324918 - 18324955
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  18324918 atattatgcattgtccttaccaactgagttaagctcac 18324955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36264503 - 36264540
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  36264503 atattatgcattatccataccaattgaattaagctcac 36264540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26133544 - 26133580
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  26133544 atattatgcattgtccttaccaactgagttaagctca 26133580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 40001351 - 40001303
Alignment:
Q  254 tcaatccatattttctttgccattttctcagccatgtcaacctctaaaa 302  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||    
T  40001351 tcaatccatattttctttgccattttcttagccatgtcaacttctaaaa 40001303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 45481530 - 45481492
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  45481530 atattatgcattgtccttaccaaatgaattaagctcacg 45481492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9639841 - 9639879
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  9639841 atattatgcattgtccttaccaagtgagttaagctcacg 9639879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18521284 - 18521246
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  18521284 atattatgcattgtccttaccaattgagttaagttcacg 18521246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 26525560 - 26525594
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagct 35  Q
    |||||||| ||||||||||||||||||||||||||    
T  26525560 atattatgtattgtccttaccaattgaattaagct 26525594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30003238 - 30003200
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  30003238 atattatgcattgtccataccaactgaattaagctcacg 30003200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 47719131 - 47719173
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtgga 43  Q
    |||||||||||| |||||||||| ||| |||||||||||||||    
T  47719131 atattatgcattatccttaccaactgagttaagctcacgtgga 47719173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 49875623 - 49875661
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  49875623 atattatgcattgtccttaccaactgagttaagctcacg 49875661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28039884 - 28039921
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  28039884 atattatgcattgtccttaccaactgagttaagctcac 28039921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 28053266 - 28053303
Alignment:
Q  2 tattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  28053266 tattatgcattgtccataccaactgaattaagctcacg 28053303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36467049 - 36467086
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    |||||||||||||||| || ||||||||||||||||||    
T  36467049 atattatgcattgtccatatcaattgaattaagctcac 36467086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45224303 - 45224340
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  45224303 atattatgaattgtccttaccaattgagttaagctcac 45224340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10489840 - 10489800
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtg 41  Q
    |||||||||||| |||||||||| ||||||||| |||||||    
T  10489840 atattatgcattatccttaccaactgaattaagttcacgtg 10489800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15803261 - 15803305
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtggata 45  Q
    |||||||||||||||||| |||| |||| |||||||||| |||||    
T  15803261 atattatgcattgtccttgccaactgaactaagctcacggggata 15803305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8875 - 8913
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  8875 atattatgcattgtccttaccaattgagttaagctcacg 8913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39914938 - 39914900
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  39914938 atattatgcattgtccttaccaattgagttaagctcacg 39914900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3955583 - 3955545
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  3955583 atattatgcattgtctttaccaattgaactaagctcacg 3955545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13906708 - 13906746
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  13906708 atattatgcattgtccttaccaactgagttaagctcacg 13906746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34702527 - 34702489
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  34702527 atattatgcattgtccttaccaactgagttaagctcacg 34702489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42515844 - 42515806
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  42515844 atattatgcattgtccataccaactgaattaagctcacg 42515806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22498979 - 22498942
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  22498979 atattatgcattgtccttaccaactgagttaagctcac 22498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 36822344 - 36822377
Alignment:
Q  6 atgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||||||||| |||||||||||    
T  36822344 atgcattgtccttaccaattgagttaagctcacg 36822377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40056614 - 40056651
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  40056614 atattatgcattgtccttaccaactgagttaagctcac 40056651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16752526 - 16752562
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  16752526 atattatgcattgtccttaccaactgaactaagctca 16752562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43108606 - 43108570
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  43108606 atattatgcattgtccttaccaactgagttaagctca 43108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25426 - 25382
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtggata 45  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  25426 atattatgcattgtccttaccaactgagttaagctcacggggata 25382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34912 - 34952
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtg 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  34912 atattatgcattgtccttaccaactgagttaagctcacgtg 34952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10601800 - 10601756
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtggata 45  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||    
T  10601800 atattatgcattgtccataccaactgaattaagctcacgcggata 10601756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 34420889 - 34420928
Alignment:
Q  4 ttatgcattgtccttaccaattgaattaagctcacgtgga 43  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  34420889 ttatgcattgtccataccaattgagttaagctcacgtgga 34420928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9241052 - 9241014
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  9241052 atattatgcattgtacttaccaattgatttaagctcacg 9241014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 56828 - 56865
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcac 38  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  56828 atattatgcattgtccataccaattgagttaagctcac 56865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17704050 - 17704005
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtggatat 46  Q
    ||||||||||||||||||||||| |||  |||||||||| ||||||    
T  17704050 atattatgcattgtccttaccaactgagctaagctcacgaggatat 17704005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7968964 - 7969000
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  7968964 atattatgcattgtccttaccaactgaattaaactca 7969000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35889700 - 35889664
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    |||||||||||||||| |||||||||||||| |||||    
T  35889700 atattatgcattgtccgtaccaattgaattatgctca 35889664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000003; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5135118 - 5135082
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  5135118 atattatgcattgtccttaccaactgaattaagctca 5135082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17588399 - 17588361
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  17588399 atattatgcattgtccttaccaactgagttaagctcacg 17588361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26973398 - 26973360
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  26973398 atattatgcattgtccttaccaatttaattaagttcacg 26973360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28130958 - 28130996
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  28130958 atattatgcattgtccttaccatttgaactaagctcacg 28130996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47377373 - 47377411
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  47377373 atattatgcattgtccttaccaactgagttaagctcacg 47377411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 8127497 - 8127452
Alignment:
Q  4 ttatgcattgtccttaccaattgaattaagctcacgtggatataat 49  Q
    |||||||||||||||||||| ||| ||||||||||| ||| |||||    
T  8127497 ttatgcattgtccttaccaactgagttaagctcacgaggacataat 8127452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7961756 - 7961792
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  7961756 atattatacattgtccttaccaactgaattaagctca 7961792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21914095 - 21914131
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  21914095 atattatgcattgtccttaccaactgagttaagctca 21914131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15954 - 15992
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  15954 atattatacattgtccttaccaattgagttaagctcacg 15992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000005; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20103478 - 20103516
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  20103478 atattatgcattgtccttaccaactgagttaagctcacg 20103516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22062437 - 22062475
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  22062437 atattatgtattgtccttaccaattgagttaagctcacg 22062475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28012638 - 28012676
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  28012638 atattatgcattgtccttaccaactgagttaagctcacg 28012676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1398421 - 1398461
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacgtg 41  Q
    ||||||||||||||||||||||| |||  ||||||||||||    
T  1398421 atattatgcattgtccttaccaactgagctaagctcacgtg 1398461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 27159734 - 27159694
Alignment:
Q  3 attatgcattgtccttaccaattgaattaagctcacgtgga 43  Q
    |||||||| ||||| ||||||||||| ||||||||||||||    
T  27159734 attatgcaatgtccctaccaattgaactaagctcacgtgga 27159694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28735256 - 28735292
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctca 37  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  28735256 atattatgcattgtccttaccaactgaattatgctca 28735292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7083016 - 7083054
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  7083016 atattatgcattgtccttaccaattgagctaagctcacg 7083054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8629720 - 8629758
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  8629720 atattatgcattgtccataccaattgagttaagctcacg 8629758  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11713703 - 11713665
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  11713703 atattatgcattatccttaccaattgatttaagctcacg 11713665  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32524444 - 32524482
Alignment:
Q  1 atattatgcattgtccttaccaattgaattaagctcacg 39  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  32524444 atattatgcattgtccctaccaattgagttaagctcacg 32524482  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 61596 - 61636
Alignment:
Q  3 attatgcattgtccttaccaattgaattaagctcacgtgga 43  Q
    |||||||||| |||||||||| ||| |||||||||||||||    
T  61596 attatgcattatccttaccaactgagttaagctcacgtgga 61636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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