View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9752_high_6 (Length: 288)
Name: NF9752_high_6
Description: NF9752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9752_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 38752265 - 38752002
Alignment:
| Q |
14 |
agacgtggcaaactgttattctgtcaaattcgcgcagttaatatagttggtgtattattgatgcactggtttgagtttctaataaaattttggctattaa |
113 |
Q |
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| T |
38752265 |
agacgtggcaaactgttattctgtcaaattcgcgcagttaatatagttggtgtattattaatgcactggtttgagtttctaataaaattttggctattaa |
38752166 |
T |
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| Q |
114 |
aagagaaaaaatacataagcattgtgttgatctatgcaggtggtgaatttactaataaatgcattttcttcttcttgatctttgtaggtggtcaatttac |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
38752165 |
aagagaaaaaatacataagcattgtgttgatctatgcaggtggtgaattaactaataaatgcattttcttcttcctgatctttgtaggtggtcaatttac |
38752066 |
T |
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| Q |
214 |
aagcacagctagcttttctgagagagcaaacagctcaaaggtgtatcaatgccccaaattctga |
277 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
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| T |
38752065 |
aagcacagctagcttttctgagagagcaagcagctcaaaggtgtctcaatgccccaaattctga |
38752002 |
T |
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