View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9752_low_5 (Length: 383)
Name: NF9752_low_5
Description: NF9752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9752_low_5 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
| | |
|
| [»] scaffold0813 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 353; Significance: 0; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Original strand, 4335277 - 4335649
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4335277 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
4335376 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4335377 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
4335476 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgtctcacccgctgttcaaacagctg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4335477 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccttctataatttggtcttggatggtaccaacaaataatgtctcaccagctgttcaaacagctg |
4335576 |
T |
|
| Q |
301 |
ttggaatgtcatcccatatttctttgaatgtatcatctgttttcaaagtccttcctaaacttcaatgcctttg |
373 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4335577 |
ttggaatgtcaccccatgtttctttgaatgtatcatctgttttcaaagtccttcctaaacttcaatgcctttg |
4335649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 2 - 335
Target Start/End: Complemental strand, 4124087 - 4123754
Alignment:
| Q |
2 |
tagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttg |
101 |
Q |
| |
|
|||||||| |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
4124087 |
tagcctttctaaccttccaagaaacatttattcgttgaaatctctgaaaactctcattctatcgggatgtttaatgattgacaagttggaagaggagttg |
4123988 |
T |
|
| Q |
102 |
gaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctt |
201 |
Q |
| |
|
|||||||||||||||||||||||||| || ||| |||| |||| ||||||||||||||||||||| ||||||| ||||||||||||||| | ||| ||| |
|
|
| T |
4123987 |
gaacaaatggaatctttaaccactctgattgcaaataatactgctataacaaaagtgcccttttcggtagtaaggtcaaaaagcattggatttatttctc |
4123888 |
T |
|
| Q |
202 |
tgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgtctcacccgctgttcaaacagctgt |
301 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||| |||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
4123887 |
tgtgtggatatgaaggattctctcgtgatgtgtttccttctatcatttcgtcttggatgttaccaacaaataatctcccacccgctgttcaaacagctgt |
4123788 |
T |
|
| Q |
302 |
tggaatgtcatcccatatttctttgaatgtatca |
335 |
Q |
| |
|
||||||||||||| | |||||||| ||| |||| |
|
|
| T |
4123787 |
cggaatgtcatcccttgtttctttgcatgcatca |
4123754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 4344578 - 4344907
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
4344578 |
ttagcctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgtttaatgattgacaagttggaagaggactt |
4344677 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
||||||||||||||||||||||||||| || ||| ||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||| | ||| ||| |
|
|
| T |
4344678 |
ggaacaaatggaatctttaaccactctgattgcaaataacactgctataacaaaagtacccttttcagtagtaaggtcaaaacgcattggatttatttct |
4344777 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgtctcacccgctgttcaaacagctg |
300 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| | |||| ||| || |||||||| ||| |
|
|
| T |
4344778 |
ttgtgtggatatgaaggattctcacgtgatgtgtttccttctatcatttggtcttggatgtcaccaacaaatggtctctcgcccacttttcaaacaactg |
4344877 |
T |
|
| Q |
301 |
ttggaatgtcatcccatatttctttgaatg |
330 |
Q |
| |
|
||| |||||||| | | ||||||| |||| |
|
|
| T |
4344878 |
ctgggatgtcatcgcttgtttctttaaatg |
4344907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 4361009 - 4361323
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| || |||||||| ||||||||||||||| |
|
|
| T |
4361009 |
ttagcctttgtaaccttccaagaaacatctatacgttgaaatctctgaaaactctcattctatctggatgttcaatgattgacacgttggaagaggactt |
4361108 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| ||||||||| | |||| |||||| ||||||| | ||| ||| |
|
|
| T |
4361109 |
ggaacaaatggaatctttaaccactctgattgcaaataacactggtataacaaaagtacccttttcaattgtaagatcaaaacgcattggatttatttct |
4361208 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgtctcacccgctgttcaaacagctg |
300 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||| |||||||||| | |||| ||| || |||||||| ||| |
|
|
| T |
4361209 |
ttgtgtggatatgaaggattctcacgtgatgtgtttccttctatcatttcgtcttggatgtcaccaacaaatggtctctcgcccacttttcaaacaactg |
4361308 |
T |
|
| Q |
301 |
ttggaatgtcatccc |
315 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
4361309 |
ctgggatgtcatccc |
4361323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 4320768 - 4320473
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
4320768 |
ttagcctttgtagccttccaagaaacatctatacgttgaaaactctgaatactctcattctatcgggatgtttaatgattgacaagttggaagaggactt |
4320669 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
|||||||||||||||||||||||| || || ||| |||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||| | ||| ||| |
|
|
| T |
4320668 |
ggaacaaatggaatctttaaccaccctgattgcaaataatactggtataacaaaagttcccttttcattagtaaggtcaaaaagcattggatttatttct |
4320569 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgtctcacccgctgttcaaacagct |
299 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||| | ||||||||| ||||||||||| |
|
|
| T |
4320568 |
ctgtgtggatatgaaggattctcacgtgatgtgtttccttctatcatttggtcttggatg---tcaccaaataatctgtcacccgcttttcaaacagct |
4320473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 4133571 - 4133386
Alignment:
| Q |
2 |
tagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttg |
101 |
Q |
| |
|
||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||| ||||| || || ||||||| |||||||| ||||||| |||||| |
|
|
| T |
4133571 |
tagccttcgtaaccttccaagaaccatctattcgttgaaatctctgaaaactcttattctttctggctgtttaattattgacaaattggaag--gacttg |
4133474 |
T |
|
| Q |
102 |
gaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattg |
189 |
Q |
| |
|
||||||||||| |||||||||||||| || | |||||||||| ||||||||||||||||||||||| | || |||||||||||||| |
|
|
| T |
4133473 |
gaacaaatggagtctttaaccactctgattgtggataacactgcaataacaaaagtgcccttttcagtcgcaaggtcaaaaagcattg |
4133386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 277
Target Start/End: Complemental strand, 6498664 - 6498399
Alignment:
| Q |
12 |
aaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatgg |
111 |
Q |
| |
|
|||||||| |||| |||||||| || || ||||| ||||| | ||||| || ||||||| ||||||||||| ||||| |||||| ||||||| |||| |
|
|
| T |
6498664 |
aaccttccgagaagcatctataaattaaaatctctagaaactttgattctttctggatgttccaagattgacaaattggaggaggacgtggaacagatgg |
6498565 |
T |
|
| Q |
112 |
aatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggta |
211 |
Q |
| |
|
|||| || || || | || || ||||| |||| |||||||||||| ||||||||| |||||| |||||||||||||| || || ||||| |||| | |
|
|
| T |
6498564 |
aatcattgacaaccttgattgcggataagactgctataacaaaagttcccttttcaatagtaagatcaaaaagcattggatacatttctttaggtggatt |
6498465 |
T |
|
| Q |
212 |
tgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgt |
277 |
Q |
| |
|
| ||||||| || |||||||| ||||| ||| ||||| ||||||||||| |||| |||||||||| |
|
|
| T |
6498464 |
taaaggattttcacgtgatgtatttccttctctcattcggtcttggatgtcaccatcaaataatgt |
6498399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 6621647 - 6621419
Alignment:
| Q |
10 |
gtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaat |
109 |
Q |
| |
|
|||| |||||||||| |||||||| || || ||||| ||||| | ||||| |||||||||| | ||||||||| ||||| |||||||||||||| || |
|
|
| T |
6621647 |
gtaaacttccaagaagcatctataaattaaaatctctagaaactttaattctttcaggatgttccatgattgacaaattggaggaggacttggaacagat |
6621548 |
T |
|
| Q |
110 |
ggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtggg |
209 |
Q |
| |
|
|||||| || || || | || || ||||| |||| |||||||||||| ||||||||| ||||| || |||| |||||| ||||| ||||| ||||| |
|
|
| T |
6621547 |
ggaatcattgacaaccttgattgcggataagactgctataacaaaagttcccttttcaatagtacgatctaaaaacattggatatatttctttatgtgga |
6621448 |
T |
|
| Q |
210 |
tatgaaggattctcccgtgatgtgtttcc |
238 |
Q |
| |
|
| ||||||||| || || ||||||||||| |
|
|
| T |
6621447 |
tttgaaggattttcacgggatgtgtttcc |
6621419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 277
Target Start/End: Original strand, 6728352 - 6728614
Alignment:
| Q |
15 |
cttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaat |
114 |
Q |
| |
|
||||||||||||||||| | ||| || ||||| ||||| | ||||| |||||||||| | ||||||||| ||||| |||||| ||||||| ||||||| |
|
|
| T |
6728352 |
cttccaagaaacatctacaagttaaaatctctagaaactttgattctttcaggatgttccatgattgacaaattggaggaggacgtggaacagatggaat |
6728451 |
T |
|
| Q |
115 |
ctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatga |
214 |
Q |
| |
|
| || || || | || || ||||| |||| ||||||||||||||| |||||| |||||| | ||||| ||||| ||||| ||||| |||| | ||| |
|
|
| T |
6728452 |
cattgacaaccttgattgcggataagactgctataacaaaagtgccattttcaatagtaagattgaaaagtattggatatatttcttttcgtggctttga |
6728551 |
T |
|
| Q |
215 |
aggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgt |
277 |
Q |
| |
|
|||||| || |||||||| || || ||| | |||||||||||||| ||| |||||||||| |
|
|
| T |
6728552 |
aggattttcacgtgatgtattcccttctcttgtttggtcttggatgtcgccatcaaataatgt |
6728614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 259
Target Start/End: Original strand, 6752968 - 6753150
Alignment:
| Q |
77 |
gattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaag |
176 |
Q |
| |
|
||||||||| ||||| |||||||||||||| |||||||| || | || | || || ||||| |||| |||||||||||||||||||||| |||||| |
|
|
| T |
6752968 |
gattgacaaattggaggaggacttggaacagatggaatcattgattaccttgattgcggataagactgctataacaaaagtgcccttttcaatagtaaga |
6753067 |
T |
|
| Q |
177 |
tcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggat |
259 |
Q |
| |
|
| ||||||||||| ||||| ||||| |||| | ||||||||| || |||||||| || || ||| ||||| |||||||||| |
|
|
| T |
6753068 |
ttgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatgtattcccttctctcattcggtcttggat |
6753150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 277
Target Start/End: Complemental strand, 6545541 - 6545321
Alignment:
| Q |
57 |
attctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaag |
156 |
Q |
| |
|
||||| || ||||||| |||||| |||| ||||| |||||||||||||| |||||||| || | || | || || ||||| |||| ||||||||||| |
|
|
| T |
6545541 |
attctttcgggatgttccaagattaacaaattggaggaggacttggaacagatggaatcgttgaaaaccttgattgcggataagactgctataacaaaag |
6545442 |
T |
|
| Q |
157 |
tgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttg |
256 |
Q |
| |
|
||||||||||| |||| | | ||||||||||| ||||| ||||| |||| | ||||||||| || |||||||| || || ||| ||||| ||||||| |
|
|
| T |
6545441 |
tgcccttttcaatagttagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatgtattcccttctctcattcggtcttg |
6545342 |
T |
|
| Q |
257 |
gatggtaccaacaaataatgt |
277 |
Q |
| |
|
| || |||| |||||||||| |
|
|
| T |
6545341 |
gctgtcaccatcaaataatgt |
6545321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 7885496 - 7885352
Alignment:
| Q |
45 |
ctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactg |
144 |
Q |
| |
|
|||||||| |||||||| || |||||| ||| ||||||||||| |||||||| | ||||||||| ||||||||||||| | | || ||| |||||| |
|
|
| T |
7885496 |
ctgaaaacactcattctgtctggatgtacaaaaattgacaagttagaagaggatatagaacaaatgaaatctttaaccaccttggttgcggatgacactg |
7885397 |
T |
|
| Q |
145 |
gtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattg |
189 |
Q |
| |
|
||| |||| |||||||||| ||||||||| ||||||||||||| |
|
|
| T |
7885396 |
ctatcacaagagtgccctttgcagtagtaagatcaaaaagcattg |
7885352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 277
Target Start/End: Original strand, 6651055 - 6651275
Alignment:
| Q |
57 |
attctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaag |
156 |
Q |
| |
|
||||| || ||||||| ||||||||||| ||||| |||||||||||||| |||||||| || | || | || || ||||| |||| ||||||||||| |
|
|
| T |
6651055 |
attctttctggatgttccaagattgacaaattggaggaggacttggaacagatggaatcattgaaaaccttgattgcggataagactgctataacaaaag |
6651154 |
T |
|
| Q |
157 |
tgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttg |
256 |
Q |
| |
|
|||| |||||| |||||| | || || |||||| ||||| ||| | ||||| | ||||||||| || || ||||| ||||| | | || || ||||||| |
|
|
| T |
6651155 |
tgccgttttcaatagtaagattaagaaacattggatatatttctctatgtggctttgaaggattttcacgagatgtatttccttttctcgttcggtcttg |
6651254 |
T |
|
| Q |
257 |
gatggtaccaacaaataatgt |
277 |
Q |
| |
|
|||| |||| ||| |||||| |
|
|
| T |
6651255 |
gatgtcaccatcaactaatgt |
6651275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 277
Target Start/End: Original strand, 6796733 - 6796995
Alignment:
| Q |
15 |
cttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaat |
114 |
Q |
| |
|
|||||||||| ||||||||| || || ||||| ||||| | ||||| || |||||| | |||||| || ||||| |||||||||||||| ||||||| |
|
|
| T |
6796733 |
cttccaagaagcatctatacattaaaatctctagaaactttgattctttctggatgtaccatgattgaaaaattggaggaggacttggaacagatggaat |
6796832 |
T |
|
| Q |
115 |
ctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatga |
214 |
Q |
| |
|
| || | ||| | || |||||||| ||| ||| ||||||||||| |||||| |||||| | |||| ||||| ||||| ||||| ||||| | ||| |
|
|
| T |
6796833 |
cattgattactttgattgcagataagacttctatcacaaaagtgccattttcaatagtaagattgaaaaatattggatatatttctttttgtggctttga |
6796932 |
T |
|
| Q |
215 |
aggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgt |
277 |
Q |
| |
|
|||||| || || || || || || ||| ||||| |||||||||| | ||| |||||||||| |
|
|
| T |
6796933 |
aggattttcacgcgacgtattcccttctctcattcggtcttggatagcgccatcaaataatgt |
6796995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 277
Target Start/End: Original strand, 6815416 - 6815678
Alignment:
| Q |
15 |
cttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaat |
114 |
Q |
| |
|
|||||||||| || ||||| || || ||||| ||||| | ||||| || ||||||| | |||||| || ||||| |||||||||||||| ||||||| |
|
|
| T |
6815416 |
cttccaagaagcaactataaattaaaatctctagaaactttgattctttctggatgttccatgattgaaaaattggaggaggacttggaacagatggaat |
6815515 |
T |
|
| Q |
115 |
ctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatga |
214 |
Q |
| |
|
|||| | || | || || ||||| |||| ||||| ||||||||| |||||||| |||| | ||||||||||| ||||| ||||| |||| | ||| |
|
|
| T |
6815516 |
ctttgattaccttgattgctgataagactgctataaaaaaagtgccattttcagtggtaagattgaaaagcattggatatatttctttaggtggctttga |
6815615 |
T |
|
| Q |
215 |
aggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgt |
277 |
Q |
| |
|
|||||| | |||||||| ||| | ||| || || | ||||||||| |||| |||||||||| |
|
|
| T |
6815616 |
aggatttacacgtgatgtattttcttctctcgttcgctcttggatgtcaccatcaaataatgt |
6815678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 88 - 277
Target Start/End: Complemental strand, 6588258 - 6588069
Alignment:
| Q |
88 |
tggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcat |
187 |
Q |
| |
|
|||| |||||||||||||| |||||||| || | || | || || ||||| |||| || ||||||||||| |||||| |||||| | |||||||| |
|
|
| T |
6588258 |
tggaggaggacttggaacagatggaatcgttgattaccttgattgccgataagactgccatcacaaaagtgccattttcaatagtaaggatgaaaagcat |
6588159 |
T |
|
| Q |
188 |
tggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgt |
277 |
Q |
| |
|
||| ||||| ||||| ||||| | ||||||||| || |||||||| || || ||| ||||| ||||||||||| ||| |||||||||| |
|
|
| T |
6588158 |
tggatatatttctttttgtggctttgaaggattttcacgtgatgtattcccttctctcattcggtcttggatgtcgccatcaaataatgt |
6588069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 57 - 277
Target Start/End: Complemental strand, 6532325 - 6532105
Alignment:
| Q |
57 |
attctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaag |
156 |
Q |
| |
|
||||| |||||||||| |||||| |||| ||||| |||||| | ||||| |||||||| || || || | || || ||||| |||| |||| || ||| |
|
|
| T |
6532325 |
attctttcaggatgttccaagattaacaaattggaggaggacatagaacagatggaatcgttgacaaccttgattgcggataagactgctatagcagaag |
6532226 |
T |
|
| Q |
157 |
tgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttg |
256 |
Q |
| |
|
| ||||||||| |||||| |||||| ||||| ||||| ||| | || || | ||||||||| || |||||| ||||| ||||||||| ||||||| |
|
|
| T |
6532225 |
tccccttttcaatagtaagaccaaaaaacattgaatatatttctatttgcggctttgaaggattttcaaatgatgtatttccttctatcattcggtcttg |
6532126 |
T |
|
| Q |
257 |
gatggtaccaacaaataatgt |
277 |
Q |
| |
|
|||| |||| |||| ||||| |
|
|
| T |
6532125 |
gatgtcaccatcaaacaatgt |
6532105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 6758670 - 6758770
Alignment:
| Q |
15 |
cttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaat |
114 |
Q |
| |
|
||||| |||| |||||| || || || ||||| ||||| | ||||| |||||||| | ||||||||||| ||||| |||||||||||||| ||||||| |
|
|
| T |
6758670 |
cttccgagaagcatctaaacattaaaatctctagaaactttgattctctcaggatgcatcaagattgacaaattggaggaggacttggaacagatggaat |
6758769 |
T |
|
| Q |
115 |
c |
115 |
Q |
| |
|
| |
|
|
| T |
6758770 |
c |
6758770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 26)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 5344793 - 5345062
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
||||||| |||| ||| ||||||| |||||||| |||||| ||||| |||||||||||||| || || |||||||||||||||||||||||||||||||| |
|
|
| T |
5344793 |
ttagcctatgtagcctgccaagaagcatctataagttgaattctctaaaaactctcattctttcgggttgtttaaagattgacaagttggaagaggactt |
5344892 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
||||||||| |||||||||||| ||| || ||| ||||||||| ||||||||||| ||||||| |||||||| ||||||||||||||| ||||| ||| |
|
|
| T |
5344893 |
agaacaaatgaaatctttaaccattctgatcgcaaataacactgcaataacaaaagttccctttttagtagtaaggtcaaaaagcattggatatatttct |
5344992 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaa |
270 |
Q |
| |
|
||||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||| |||||||| |
|
|
| T |
5344993 |
ctgtgtggctatgaaggattctcacgcgatgtatttccatctatcatctggtcttggatgtcaccaacaa |
5345062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 5066843 - 5066569
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||| |||||| ||||| |||||||||||||| || || ||| ||| |||||||||||| ||||||||| | |
|
|
| T |
5066843 |
ttagccttcgtaaccttccaagaagcatctataagttgaaatctcttaaaactctcattctttctgggtgtataatgattgacaagttagaagaggacat |
5066744 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
|||||||||||||||||||||||||| | ||| |||| |||| |||| || | | |||||||||||||||| ||||||||||||||| || |||||| |
|
|
| T |
5066743 |
agaacaaatggaatctttaaccactctgcttgcacataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattggatacatctct |
5066644 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
||||| || |||||||||||||| |||||||||||||| |||||||||| |||||||||| ||||||||||||| |
|
|
| T |
5066643 |
ttgtgcggctatgaaggattctcgcgtgatgtgtttccatctatcattttgtcttggatgtcaccaacaaataat |
5066569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 5690308 - 5690039
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
||||||||| |||||||||||||| |||||||| |||||| |||||||||||||||||||| || || |||| || |||| ||||||||||||||||||| |
|
|
| T |
5690308 |
ttagcctttctaaccttccaagaagcatctataagttgaaatctctgaaaactctcattctttccgggtgttcaatgattaacaagttggaagaggactt |
5690209 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
||||||||||||||||||||||||||| | ||| || ||||||| ||||||| |||||||||||| | |||| ||||||||||||||| ||||| ||| |
|
|
| T |
5690208 |
ggaacaaatggaatctttaaccactctgcttgcaaatgacactggaataacaagtgtgcccttttcaattgtaaggtcaaaaagcattgggtatatttct |
5690109 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaa |
270 |
Q |
| |
|
|||| || ||||||||||||| |||||| | ||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
5690108 |
ctgtgcggacatgaaggattctcacgtgatatatttccatctatcatttggtcttggatgtcaccaacaa |
5690039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 5102763 - 5102489
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||| ||| ||||||||||| |||||||| |||||| ||| |||||| |||||||| || || ||||||| |||||||||||||||||| ||||| |
|
|
| T |
5102763 |
ttagccttcgtagccttccaagaagcatctataagttgaaatctttgaaaatactcattctttctgggtgtttaatgattgacaagttggaagacgactt |
5102664 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||| | ||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
5102663 |
ggaacaaatggaatcattaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtagtaaggtcaaaaagcattggatatatctct |
5102564 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
| ||||| ||||||||| | || | |||||||||||| |||||||| |||||||||||| ||||||||||||| |
|
|
| T |
5102563 |
ctatgtggctatgaaggactttcacatgatgtgtttccatctatcatctggtcttggatgtcaccaacaaataat |
5102489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 5425855 - 5426116
Alignment:
| Q |
14 |
ccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaa |
113 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||||||||| || || ||| ||| |||||||||||||||||||||| | |||||||||||| |
|
|
| T |
5425855 |
ccttccaagaaacatctataagttgaaatctctgaaaactctcattctttctgggtgtgtaatgattgacaagttggaagaggacatagaacaaatggaa |
5425954 |
T |
|
| Q |
114 |
tctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatg |
213 |
Q |
| |
|
|||||||||||||| || ||| |||| |||| |||| || ||| ||||||||||| |||| |||| |||||||||| || ||||||||||| || |||| |
|
|
| T |
5425955 |
tctttaaccactctgattgcacataaaactgcaataaaaagagtacccttttcagtggtaatgtcacaaagcattggatacatctctttgtgcggctatg |
5426054 |
T |
|
| Q |
214 |
aaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
||||||| || |||||||||||||| | |||||||||||||||||| ||||||||||||| |
|
|
| T |
5426055 |
aaggattttcacgtgatgtgtttccagcgatcatttggtcttggatgtcaccaacaaataat |
5426116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 5128566 - 5128295
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
||||||| |||| ||| ||||||| |||||||| |||||| ||| |||||||||||||||| || || ||| ||| |||||||||||||||||||||||| |
|
|
| T |
5128566 |
ttagcctatgtagcctcccaagaagcatctataagttgaaatctttgaaaactctcattctttctggttgtataatgattgacaagttggaagaggactt |
5128467 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
||||||||||||||| ||||| ||||| | ||| ||||||||| |||| || ||| |||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
5128466 |
ggaacaaatggaatcattaacaactctgcttgcaaataacactgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatatatctct |
5128367 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaat |
272 |
Q |
| |
|
|||| || |||||||||| || ||||||||||||| |||||||| |||||||||||| |||||||||| |
|
|
| T |
5128366 |
ctgtgcggccatgaaggattttcaagtgatgtgtttccatctatcatctggtcttggatgtcaccaacaaat |
5128295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 5074044 - 5073783
Alignment:
| Q |
14 |
ccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaa |
113 |
Q |
| |
|
||||||||||| ||||||| |||||| ||||| |||||||||||||| || || |||| || |||||||||||||||||||||||| ||||| ||| | |
|
|
| T |
5074044 |
ccttccaagaagtatctataagttgaaatctctaaaaactctcattctttccgggtgttcaatgattgacaagttggaagaggacttagaacagatgaca |
5073945 |
T |
|
| Q |
114 |
tctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatg |
213 |
Q |
| |
|
|||||||||||||| || ||| ||||||| | ||||||| |||||||||||||||||||| ||| ||||||||||| ||||| |||||||| || |||| |
|
|
| T |
5073944 |
tctttaaccactctgatagcaaataacaccgcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattggatatatttctttgtgcggctatg |
5073845 |
T |
|
| Q |
214 |
aaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
|||||||||| ||||||||||| || || |||||||||||||||||| ||| ||||||||| |
|
|
| T |
5073844 |
aaggattctcacgtgatgtgttcccatcgatcatttggtcttggatgtcaccgacaaataat |
5073783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 5096640 - 5096920
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||| ||| ||||||| ||| |||||||| |||||| |||||||||||||||||||| || || ||| ||| ||||||| |||||||||||||| | |
|
|
| T |
5096640 |
ttagccttcgtagccttccaggaagcatctataagttgaaatctctgaaaactctcattctttctgggtgtataatgattgacgagttggaagaggacat |
5096739 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
|||||||||||||| ||||||| ||| | ||| |||||||||| |||| || ||| |||||||||||||||| ||||||||||||||| || || ||| |
|
|
| T |
5096740 |
agaacaaatggaatcattaaccattctgcttgcaaataacactggaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatacatttct |
5096839 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataatgtctca |
281 |
Q |
| |
|
| ||||| |||||||||| || ||||||||||||||||||||||| ||||||||| || ||||||||||||| ||||| |
|
|
| T |
5096840 |
ctatgtggccatgaaggattttcacgtgatgtgtttccgtctatcatctggtcttggttgtcaccaacaaataatctctca |
5096920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 5157777 - 5157503
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||| | | ||||||||||| |||||||| |||||| |||||||||| | | ||||| ||||| ||| ||| |||||||||||||||||||||| | |
|
|
| T |
5157777 |
ttagccttcgaagccttccaagaagcatctataagttgaaatctctgaaaattttaattctttcagggtgtataatgattgacaagttggaagaggacat |
5157678 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
||||| |||||||||||||||||||| | ||| | |||||| |||| || ||| |||||||||||||||| ||||||||||||||| || |||||| |
|
|
| T |
5157677 |
agaacagatggaatctttaaccactctgcttgcacacgacactgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatacatctct |
5157578 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
||| | || ||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
5157577 |
ttgggcggctatgaaggattttctcgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat |
5157503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 270
Target Start/End: Original strand, 5176685 - 5176940
Alignment:
| Q |
15 |
cttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaat |
114 |
Q |
| |
|
|||||||||| ||||||| |||||| ||| ||||||| |||||||| || || |||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5176685 |
cttccaagaagtatctataagttgaaatctttgaaaacactcattctttctgggtgttcgatgattgacaagttggaagaggacttggaacaaatggaat |
5176784 |
T |
|
| Q |
115 |
ctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatga |
214 |
Q |
| |
|
||||||| ||||| | ||| ||||||||| ||||||| ||||||||| ||| |||||| ||||||||||||||| || ||||||||||| || ||||| |
|
|
| T |
5176785 |
ctttaactactctgcttgcaaataacactgcaataacaagagtgcccttgtcaatagtaaggtcaaaaagcattggatacatctctttgtgcggctatga |
5176884 |
T |
|
| Q |
215 |
aggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaa |
270 |
Q |
| |
|
||||||||| |||||| | ||||| || |||||||||||||||||| |||||||| |
|
|
| T |
5176885 |
aggattctcacgtgatatatttccatcaatcatttggtcttggatgtcaccaacaa |
5176940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 15 - 270
Target Start/End: Original strand, 5278512 - 5278767
Alignment:
| Q |
15 |
cttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaat |
114 |
Q |
| |
|
|||||||||| ||||||| |||||| ||| ||||||| |||||||| || || |||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5278512 |
cttccaagaagtatctataagttgaaatctttgaaaacactcattctttctgggtgttcgatgattgacaagttggaagaggacttggaacaaatggaat |
5278611 |
T |
|
| Q |
115 |
ctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatga |
214 |
Q |
| |
|
||||||| ||||| | ||| ||||||||| ||||||| ||||||||| || |||||| ||||||||||||||| || ||||||||||| || ||||| |
|
|
| T |
5278612 |
ctttaactactctgcttgcaaataacactgcaataacaagagtgcccttgtctatagtaaggtcaaaaagcattggatacatctctttgtgcggctatga |
5278711 |
T |
|
| Q |
215 |
aggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaa |
270 |
Q |
| |
|
||||||||| |||||| | ||||| || |||||||||||||||||| |||||||| |
|
|
| T |
5278712 |
aggattctcacgtgatatatttccatcaatcatttggtcttggatgtcaccaacaa |
5278767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 5182063 - 5181802
Alignment:
| Q |
14 |
ccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaa |
113 |
Q |
| |
|
||||||||||| |||||||| ||||| || | || ||||||||||| || || ||||||| ||||||||||||||||||||| |||||||||||| || |
|
|
| T |
5182063 |
ccttccaagaagcatctataatttgaaatcattaaacactctcattctttctgggtgtttaatgattgacaagttggaagaggatttggaacaaatgaaa |
5181964 |
T |
|
| Q |
114 |
tctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatg |
213 |
Q |
| |
|
||||||||||| | || ||| ||||||||| ||||||| |||||| ||||||||||||||||| |||||||||| ||||| || |||||||| |||| |
|
|
| T |
5181963 |
tctttaaccacattgattgcaaataacactgcaataacaagagtgccgttttcagtagtaaagtccaaaagcattgcatatatttccttgtgtggatatg |
5181864 |
T |
|
| Q |
214 |
aaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
|||||||||| | |||||||||||| | |||||||||||||||||| ||| ||||||||| |
|
|
| T |
5181863 |
aaggattctcacatgatgtgtttccagcgatcatttggtcttggatgtcaccgacaaataat |
5181802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 10 - 275
Target Start/End: Original strand, 5447528 - 5447793
Alignment:
| Q |
10 |
gtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaat |
109 |
Q |
| |
|
||||||| ||||||| |||||||| |||||| ||| |||||||||||||||| || || |||||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
5447528 |
gtaacctcccaagaagcatctataagttgaaatctttgaaaactctcattctttctggttgtttaaagattgacaagctggaagaggacttggaacagat |
5447627 |
T |
|
| Q |
110 |
ggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtggg |
209 |
Q |
| |
|
|||||||||||||||||| | ||| |||| ||| ||||||| |||||||||||| ||||| | ||| || |||||||| ||||| |||||||| || |
|
|
| T |
5447628 |
ggaatctttaaccactctgcttgcaaataatacttcaataacaacagtgcccttttcggtagttaggtcgaagagcattggatatatttctttgtgcgga |
5447727 |
T |
|
| Q |
210 |
tatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
| |||||||| ||| | |||||||||||| ||||| ||| ||||||||||| ||||| ||||||| |
|
|
| T |
5447728 |
tttgaaggatcctcgcatgatgtgtttccatctattattcggtcttggatgtcaccaagaaataat |
5447793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 5 - 275
Target Start/End: Complemental strand, 5354759 - 5354489
Alignment:
| Q |
5 |
cctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaa |
104 |
Q |
| |
|
||||| || ||| ||||||| |||||| | |||||| ||| |||||||||||||||| || || ||| |||| | |||||||||||||||||||||||| |
|
|
| T |
5354759 |
cctttctagcctcccaagaagcatctacaagttgaaatctttgaaaactctcattctttctggttgtaaaaagttagacaagttggaagaggacttggaa |
5354660 |
T |
|
| Q |
105 |
caaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgt |
204 |
Q |
| |
|
||| |||||||||||||||| || | ||| || |||||| ||||||| ||| ||||| ||| |||| | || ||||||||||| ||||| ||||| | |
|
|
| T |
5354659 |
caattggaatctttaaccaccctgcttgcaaatgacactgcaataacaagagtacccttctcaatagttagttccaaaagcattggatatatttctttat |
5354560 |
T |
|
| Q |
205 |
gtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
5354559 |
gtggctatgaaggattctcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat |
5354489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 5350339 - 5350561
Alignment:
| Q |
14 |
ccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaa |
113 |
Q |
| |
|
||||||||||| ||||| || |||||| ||||| |||||||||||||| ||||| ||| ||| |||||||||||||||||||||| | |||||||||||| |
|
|
| T |
5350339 |
ccttccaagaagcatctttaagttgaaatctctcaaaactctcattctttcagggtgtataatgattgacaagttggaagaggacatagaacaaatggaa |
5350438 |
T |
|
| Q |
114 |
tctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatg |
213 |
Q |
| |
|
|||||||||||||| | ||| |||| |||| |||| || | | |||||||||||||||| ||||||||||||||| || ||||||||||| || |||| |
|
|
| T |
5350439 |
tctttaaccactctgcttgcacataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattggatacatctctttgtgcggctatg |
5350538 |
T |
|
| Q |
214 |
aaggattctcccgtgatgtgttt |
236 |
Q |
| |
|
||||||| || |||||||||||| |
|
|
| T |
5350539 |
aaggattttcacgtgatgtgttt |
5350561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 5383258 - 5383517
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
||||||| |||| ||| ||||||| ||| |||| |||||| |||||||||||||||||||| || || |||||||||||| |||||||||||||||| | |
|
|
| T |
5383258 |
ttagcctatgtagcctcccaagaagcatttataagttgaaatctctgaaaactctcattctttctggttgtttaaagattaccaagttggaagaggacat |
5383357 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
|||||||||||||||||||| ||| | | ||||||||||||| ||||||| ||| ||| ||||| | ||| ||||||||| |||| ||||| ||| |
|
|
| T |
5383358 |
agaacaaatggaatctttaactactttgcttgcagataacactgcaataacaagagttcccctttcaattttaaggtcaaaaagtattgtatatatttct |
5383457 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatg |
260 |
Q |
| |
|
||||| || ||||||||||||| |||||||||||||| || |||||| |||||||||| |
|
|
| T |
5383458 |
ttgtgcggccatgaaggattctcacgtgatgtgtttccatccatcattaagtcttggatg |
5383517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 275
Target Start/End: Original strand, 5433970 - 5434241
Alignment:
| Q |
4 |
gcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttgga |
103 |
Q |
| |
|
|||| |||||||| ||||||| ||| |||| |||||| ||| ||||||||||||| || | || ||||||||||||||||| |||||||| |||||||| |
|
|
| T |
5433970 |
gcctatgtaacctcccaagaagcatatataagttgaaatctttgaaaactctcatccttactggctgtttaaagattgacaatttggaagatgacttgga |
5434069 |
T |
|
| Q |
104 |
acaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttg |
203 |
Q |
| |
|
||| |||||||||||||||||||| | ||| ||||||||| |||| || |||||| |||||||| | | |||||||||||||| |||||||||||| |
|
|
| T |
5434070 |
acatatggaatctttaaccactctgcttgcaaataacactgcaataaaaagagtgcctctttcagtactgagatcaaaaagcattggatatatctctttg |
5434169 |
T |
|
| Q |
204 |
tgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
|| || |||||||||||||| | ||| | ||||| | ||||||| |||||||||| ||||||||||||| |
|
|
| T |
5434170 |
tgcggttatgaaggattctcacacgatttatttccatttatcattcagtcttggatgtcaccaacaaataat |
5434241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 5370503 - 5370774
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||| ||||||||||||||| ||| |||| |||||| ||||| || ||||| ||||| ||||| ||| ||| |||||| |||||||||||||| | |
|
|
| T |
5370503 |
ttagccttcgtaaccttccaagaagcatttataagttgaaatctctaaagactcttattctttcagggtgtgtaatgattgagaagttggaagaggatat |
5370602 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
||||| |||||||| ||||||||||| | ||| ||||||||| |||| || || ||||||||||||||| ||||||||||||||| || || || |
|
|
| T |
5370603 |
agaacagatggaatcattaaccactctgcttgcaaataacactgcaataaaaagggtacccttttcagtagtacggtcaaaaagcattggatacatttca |
5370702 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaat |
272 |
Q |
| |
|
|||||||| ||| |||||| || | |||||| ||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
5370703 |
ttgtgtggccatgtaggattttcacatgatgtttttccatctatcatttggtcttggatgtcaccaacaaat |
5370774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 275
Target Start/End: Complemental strand, 5284530 - 5284264
Alignment:
| Q |
9 |
tgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaa |
108 |
Q |
| |
|
|||| ||| ||| ||| |||||||| |||||| ||||| |||||| ||||||| | || |||| || |||||||||||||||||||||||| ||||| | |
|
|
| T |
5284530 |
tgtagcctcccacgaagcatctataagttgaaatctctaaaaactttcattctttttgggtgttcaatgattgacaagttggaagaggacttagaacaga |
5284431 |
T |
|
| Q |
109 |
tggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgg |
208 |
Q |
| |
|
|| ||||||||||||||| || || ||||||| | ||||||| |||||||||||||||||||| ||| ||||||||||| ||||| ||||||| || |
|
|
| T |
5284430 |
tgacatctttaaccactctgatagctaataacaccgcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattggatatattgctttgtgcgg |
5284331 |
T |
|
| Q |
209 |
gtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
||||| ||| | || | ||||||||||| | || |||| ||| |||||| | ||||||||||| |
|
|
| T |
5284330 |
ttatgagggactttcaagcgatgtgtttccattaataattttgtcatggatgtcagcaacaaataat |
5284264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 149 - 270
Target Start/End: Complemental strand, 5243914 - 5243793
Alignment:
| Q |
149 |
aacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatt |
248 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||| || ||||| ||||||||||| ||||||||||| || || ||||| ||||| |||||||| |
|
|
| T |
5243914 |
aacaagagtgcccttttcagtagtaaggtcaaaaagcatcggatatatttctttgtgtggctatgaaggattttcacgcgatgtatttccatctatcatc |
5243815 |
T |
|
| Q |
249 |
tggtcttggatggtaccaacaa |
270 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
5243814 |
tggtcttggatgtcaccaacaa |
5243793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 5257466 - 5257297
Alignment:
| Q |
18 |
ccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctt |
117 |
Q |
| |
|
||||||| |||||||| |||||| ||||| |||||| ||||||| || || |||| || |||||||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
5257466 |
ccaagaagcatctataagttgaaatctctaaaaactttcattctttctgggtgttcaatgattgacaagttggaagaggacttagaacagatgacatctt |
5257367 |
T |
|
| Q |
118 |
taaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcat |
187 |
Q |
| |
|
|||||||||| || ||| ||||||||| ||||||| |||||| || ||||| ||| ||||||||||| |
|
|
| T |
5257366 |
taaccactctaattgcaaataacactgcaataacaagagtgccattatcagttttaagatcaaaaagcat |
5257297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 270
Target Start/End: Original strand, 5396895 - 5397151
Alignment:
| Q |
14 |
ccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaa |
113 |
Q |
| |
|
||||||||||| || |||| |||||| || || ||||||| |||| || || |||||| ||||||||| |||||||| || |||||||| |||||| |
|
|
| T |
5396895 |
ccttccaagaagtatttataagttgaaatcactacaaactcttcttctttctgggtgtttactgattgacaaattggaagaagatttggaacagatggaa |
5396994 |
T |
|
| Q |
114 |
tctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatg |
213 |
Q |
| |
|
||||||||||| | | ||| ||||||||| |||| || |||||| |||||| | ||| || |||||||||||| | |||||||||||| || |||| |
|
|
| T |
5396995 |
tctttaaccaccttggttgcaaataacactgcaataaaaagagtgccgttttcaattttaaggttaaaaagcattggatttatctctttgtgcggatatg |
5397094 |
T |
|
| Q |
214 |
aaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaa |
270 |
Q |
| |
|
||||||| || |||| |||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
5397095 |
aaggattttcatgtgaagtgtttccagctatcatttcgtcttggatgtcaccaacaa |
5397151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 5447089 - 5447215
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
||||||| |||| ||| |||| || |||||||| |||||| ||| ||||||||||| |||| || || |||||||||||||||||| ||||||||||||| |
|
|
| T |
5447089 |
ttagcctatgtagcctcccaaaaagcatctataagttgaaatctttgaaaactctcgttctttctggttgtttaaagattgacaaggtggaagaggactt |
5447188 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactct |
127 |
Q |
| |
|
|| |||||||||||||||||||||| |
|
|
| T |
5447189 |
cgagaaaatggaatctttaaccactct |
5447215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 49 - 259
Target Start/End: Original strand, 5179521 - 5179731
Alignment:
| Q |
49 |
aaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactggtat |
148 |
Q |
| |
|
||||||| ||||| || || |||| ||||||| ||||||||||||||||||||||| |||||||||| ||||| || || || || || |||||| || |
|
|
| T |
5179521 |
aaactctgattctttctgggtgttcaaagattaacaagttggaagaggacttggaagaaatggaatccttaacgaccctgattgctaatgacactgcaat |
5179620 |
T |
|
| Q |
149 |
aacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatt |
248 |
Q |
| |
|
||| | ||| |||||| |||||| || || |||| |||||| ||||| ||||| || || ||| |||||||||| |||||||| |||| | ||||||| |
|
|
| T |
5179621 |
aactagagttccctttgcagtaggaaggttgaaaaacattggatatatttctttctgcggctataaaggattctcacgtgatgtagttccatatatcatt |
5179720 |
T |
|
| Q |
249 |
tggtcttggat |
259 |
Q |
| |
|
|||||||||| |
|
|
| T |
5179721 |
cggtcttggat |
5179731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5244016 - 5243910
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||| | | ||||||||||| |||||||| |||||| |||||||||||| ||||||| ||||| ||| ||| |||||| ||||||||||||||||| |
|
|
| T |
5244016 |
ttagccttcgaagccttccaagaagcatctataagttgaaatctctgaaaactttcattctctcagggtgtataatgattgagaagttggaagaggactt |
5243917 |
T |
|
| Q |
101 |
ggaacaa |
107 |
Q |
| |
|
||||||| |
|
|
| T |
5243916 |
ggaacaa |
5243910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 49 - 259
Target Start/End: Original strand, 5281280 - 5281490
Alignment:
| Q |
49 |
aaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactggtat |
148 |
Q |
| |
|
||||||| ||||| || || |||| || |||| ||||||| |||||||||||||||||||||||||| ||||| || || || || || |||||| || |
|
|
| T |
5281280 |
aaactctgattctttctgggtgttcaatgattaacaagttagaagaggacttggaacaaatggaatccttaacgaccctgattgctaatgacactgcaat |
5281379 |
T |
|
| Q |
149 |
aacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatt |
248 |
Q |
| |
|
||||| ||| |||||| |||||| || || |||| |||||| ||||| ||||| || || ||| |||||||||| |||||||| |||| | ||||||| |
|
|
| T |
5281380 |
aacaagagttccctttgcagtaggaaggttgaaaaacattggatatatttctttctgcggctataaaggattctcacgtgatgtagttccatatatcatt |
5281479 |
T |
|
| Q |
249 |
tggtcttggat |
259 |
Q |
| |
|
|||||||||| |
|
|
| T |
5281480 |
cggtcttggat |
5281490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 131; Significance: 7e-68; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 9049 - 8775
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||| ||| ||||||||||| |||||||| |||||| |||||||||||||||||||| || || ||| ||| |||||||||||||||||||||| | |
|
|
| T |
9049 |
ttagccttcgtagccttccaagaagcatctataagttgaaatctctgaaaactctcattctttctgggtgtataatgattgacaagttggaagaggacat |
8950 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
||||| |||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||| |||||| ||||||||| |||| ||||| ||| |
|
|
| T |
8949 |
agaacagatggaatctttaaccactctgcttgcagataacactgcattaacaagagtgcccttttcaatagtaaggtcaaaaagtattgtatatatttct |
8850 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
||||| || ||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||||||| |
|
|
| T |
8849 |
ttgtgcggccatgaaggattctcacgtgatgtgtttccatctatcattaagtcttggatgtctccaacaaataat |
8775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 111; Significance: 6e-56; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 8877541 - 8877815
Alignment:
| Q |
1 |
ttagcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggactt |
100 |
Q |
| |
|
|||||||| | | ||||||||||| || || | |||||| ||||| ||| |||||||||| || || |||| || ||||||||||||||| |||||||| |
|
|
| T |
8877541 |
ttagccttcggagccttccaagaagtatatacaagttgaaatctctaaaatctctcattctttctgggtgttcaatgattgacaagttggaggaggactt |
8877640 |
T |
|
| Q |
101 |
ggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctct |
200 |
Q |
| |
|
||||| ||| |||||||||||||||| | ||| ||||||||| |||| || ||| || |||||| |||||| ||||||||||||||| ||||| ||| |
|
|
| T |
8877641 |
agaacagatgaaatctttaaccactctgcttgcaaataacactgcaataaaaagagtaccattttcattagtaaggtcaaaaagcattggatatatttct |
8877740 |
T |
|
| Q |
201 |
ttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
||||| || ||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
8877741 |
ttgtgcggctatgaaggattttcgcgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat |
8877815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 260
Target Start/End: Original strand, 20812254 - 20812468
Alignment:
| Q |
46 |
tgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactgg |
145 |
Q |
| |
|
|||||||||| ||||| || || |||| ||||||||| ||||||||||| || | ||||||||||| || || |||| || |||| || ||||| |
|
|
| T |
20812254 |
tgaaaactcttattctttctggttgttcaaagattgagaagttggaagaagatataatgcaaatggaatccttgacagctctaattgcagcaaatactgg |
20812353 |
T |
|
| Q |
146 |
tataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatc |
245 |
Q |
| |
|
||| | | ||||||||| |||| ||| || ||||||||||||| ||||| || | ||||| || |||||||| || |||||||| ||||| ||| || |
|
|
| T |
20812354 |
tatcaaacaagtgccctattcaatagcaagatcaaaaagcattgcatatatatcactatgtggatacgaaggattatcacgtgatgtttttccttctctc |
20812453 |
T |
|
| Q |
246 |
atttggtcttggatg |
260 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
20812454 |
atttggtcttggatg |
20812468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 260
Target Start/End: Original strand, 20838609 - 20838823
Alignment:
| Q |
46 |
tgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactgg |
145 |
Q |
| |
|
|||||||||| ||||| || || |||| ||||||||| || |||||||| || | ||||||||||| || || |||| || |||| || ||||| |
|
|
| T |
20838609 |
tgaaaactcttattctttctggttgttcaaagattgagaaattggaagaagatataatgcaaatggaatccttgacagctctaattgcagcaaatactgg |
20838708 |
T |
|
| Q |
146 |
tataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatc |
245 |
Q |
| |
|
||| | | ||||||||| |||| ||| || |||||||||||||| ||||| || | ||||| ||||||||||| || | |||||| ||||| ||| || |
|
|
| T |
20838709 |
tatcaaacaagtgccctattcaatagcaagatcaaaaagcattggatatatatcactatgtggatatgaaggattatcacatgatgtttttccttctctc |
20838808 |
T |
|
| Q |
246 |
atttggtcttggatg |
260 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
20838809 |
atttggtcttggatg |
20838823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 12599142 - 12599062
Alignment:
| Q |
180 |
aaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatg |
260 |
Q |
| |
|
||||||||||| ||||| || |||||||| ||||||||||| || |||||||| ||||| ||| ||| ||||||||||||| |
|
|
| T |
12599142 |
aaaagcattggatatatatccttgtgtggatatgaaggattatcacgtgatgtttttccttctctcaattggtcttggatg |
12599062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 15803019 - 15803101
Alignment:
| Q |
177 |
tcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggat |
259 |
Q |
| |
|
|||||||||||||| ||||| ||| | ||||| ||| ||||||| || | |||||| ||||| ||| ||||| |||||||||| |
|
|
| T |
15803019 |
tcaaaaagcattggatatatatctctatgtggatataaaggattatcacatgatgtttttccttctctcattaggtcttggat |
15803101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 109; Significance: 1e-54; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 272
Target Start/End: Complemental strand, 36213931 - 36213707
Alignment:
| Q |
48 |
aaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactggta |
147 |
Q |
| |
|
|||||||||||||| || ||||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||| | || ||| ||||||||| | |
|
|
| T |
36213931 |
aaaactctcattctttctggatgttcaaagattgacaaattggaagaggacatggaacagatggaatctttaaccaccttgattgcaaataacactgcaa |
36213832 |
T |
|
| Q |
148 |
taacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcat |
247 |
Q |
| |
|
|||||| |||||| ||||||||||||| || |||||||| | ||||| |||||||| || |||||||||||||| | |||||||||||| |||||||| |
|
|
| T |
36213831 |
taacaagagtgccattttcagtagtaagatctaaaagcatcgcttatatatctttgtgcggctatgaaggattctcacatgatgtgtttccatctatcat |
36213732 |
T |
|
| Q |
248 |
ttggtcttggatggtaccaacaaat |
272 |
Q |
| |
|
||||||||||||| |||||||||| |
|
|
| T |
36213731 |
ttggtcttggatgtcaccaacaaat |
36213707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 260
Target Start/End: Original strand, 18935321 - 18935577
Alignment:
| Q |
4 |
gcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttgga |
103 |
Q |
| |
|
|||||||| | |||||||||| |||||||| || |||| | ||| |||||||| |||| |||||| ||| ||||||||||||||||||||| | || |
|
|
| T |
18935321 |
gcctttgtgaacttccaagaagcatctataaattagagtcggtcaaagctctcattttatctggatgtacaaaaattgacaagttggaagaggacataga |
18935420 |
T |
|
| Q |
104 |
acaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttg |
203 |
Q |
| |
|
||| ||| |||||| ||||| || | || ||||| |||| | |||||| |||||||||| ||||||||| |||||||||||||| | ||| || || |
|
|
| T |
18935421 |
acagatgacatctttgaccaccctggttgcggataagactgctgtaacaagagtgccctttgcagtagtaagatcaaaaagcattggatttatttcactg |
18935520 |
T |
|
| Q |
204 |
tgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatg |
260 |
Q |
| |
|
||||| | ||||||||| | ||| |||||||||| || || ||| |||||||||| |
|
|
| T |
18935521 |
tgtggatttgaaggattagcacgtaatgtgtttccttcaattattcagtcttggatg |
18935577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 34724732 - 34724626
Alignment:
| Q |
4 |
gcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttgga |
103 |
Q |
| |
|
|||||||| | |||||||||| |||||||| |||||||| | |||||||||||| | || |||||| ||| ||||||||||||||||||||| | || |
|
|
| T |
34724732 |
gcctttgtgagcttccaagaagcatctataaattgaagtcagtaaaaactctcattgtgtctggatgtacaaaaattgacaagttggaagaggacataga |
34724633 |
T |
|
| Q |
104 |
acaaatg |
110 |
Q |
| |
|
||||||| |
|
|
| T |
34724632 |
acaaatg |
34724626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 260
Target Start/End: Complemental strand, 22584361 - 22584104
Alignment:
| Q |
3 |
agcctttgtaaccttccaagaaacatctatacgttgaagtctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttgg |
102 |
Q |
| |
|
|||||||||| ||| |||||||||||||| | |||||| ||| |||||||||||||||| || || |||| ||| || | ||||||||||||||||||| |
|
|
| T |
22584361 |
agcctttgtagcctcccaagaaacatctacaagttgaaatctttgaaaactctcattctttctggctgttaaaaactttataagttggaagaggacttgg |
22584262 |
T |
|
| Q |
103 |
aacaaatggaatctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctcttt |
202 |
Q |
| |
|
||||||||||||||||||||||||| | ||| || | |||| |||| ||||||||| |||||| || | | |||||||| ||| | || || ||||| |
|
|
| T |
22584261 |
aacaaatggaatctttaaccactctgcttgcaaatgaaactgcaataaaaaaagtgccattttcaatatttaggtcaaaaactatttggtacatttcttt |
22584162 |
T |
|
| Q |
203 |
gtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatg |
260 |
Q |
| |
|
|||||| ||||||||| ||| | ||||| |||| ||||| ||||||||||||||| |
|
|
| T |
22584161 |
gtgtggctatgaaggactcttaagcgatgtagttccatctatgatttggtcttggatg |
22584104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 47986960 - 47986830
Alignment:
| Q |
42 |
tctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataaca |
141 |
Q |
| |
|
||||| |||||||||||||| || || |||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| ||| | | ||| |||||| |
|
|
| T |
47986960 |
tctctaaaaactctcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaatgaaatctttaactactttggttgcaaataaca |
47986861 |
T |
|
| Q |
142 |
ctggtataacaaaagtgcccttttcagtagt |
172 |
Q |
| |
|
||| ||||||| |||||| || |||||||| |
|
|
| T |
47986860 |
ctgcgataacaagagtgcctttatcagtagt |
47986830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 47996247 - 47996117
Alignment:
| Q |
42 |
tctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataaca |
141 |
Q |
| |
|
||||| |||||||||||||| || || |||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| ||| | | ||| |||||| |
|
|
| T |
47996247 |
tctctaaaaactctcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaatgaaatctttaactactttggttgcaaataaca |
47996148 |
T |
|
| Q |
142 |
ctggtataacaaaagtgcccttttcagtagt |
172 |
Q |
| |
|
||| ||||||| |||||| || |||||||| |
|
|
| T |
47996147 |
ctgcgataacaagagtgcctttatcagtagt |
47996117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 48005534 - 48005404
Alignment:
| Q |
42 |
tctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataaca |
141 |
Q |
| |
|
||||| |||||||||||||| || || |||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| ||| | | ||| |||||| |
|
|
| T |
48005534 |
tctctaaaaactctcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaatgaaatctttaactactttggttgcaaataaca |
48005435 |
T |
|
| Q |
142 |
ctggtataacaaaagtgcccttttcagtagt |
172 |
Q |
| |
|
||| ||||||| |||||| || |||||||| |
|
|
| T |
48005434 |
ctgcgataacaagagtgcctttatcagtagt |
48005404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 48014819 - 48014689
Alignment:
| Q |
42 |
tctctgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataaca |
141 |
Q |
| |
|
||||| |||||||||||||| || || |||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| ||| | | ||| |||||| |
|
|
| T |
48014819 |
tctctaaaaactctcattctttctggctgtttaaagattaacaagttggaagaggacatggaataaatgaaatctttaactactttggttgcaaataaca |
48014720 |
T |
|
| Q |
142 |
ctggtataacaaaagtgcccttttcagtagt |
172 |
Q |
| |
|
||| ||||||| |||||| || |||||||| |
|
|
| T |
48014719 |
ctgcgataacaagagtgcctttatcagtagt |
48014689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 47986812 - 47986747
Alignment:
| Q |
210 |
tatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
47986812 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat |
47986747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 47996099 - 47996034
Alignment:
| Q |
210 |
tatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
47996099 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat |
47996034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 48005386 - 48005321
Alignment:
| Q |
210 |
tatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
48005386 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat |
48005321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 48014671 - 48014606
Alignment:
| Q |
210 |
tatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaaataat |
275 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
48014671 |
tatgaaggattttcacgtgatgtgtttccatctatcatttggtcttggatgtcaccaacaaataat |
48014606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 6905899 - 6905806
Alignment:
| Q |
177 |
tcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaa |
270 |
Q |
| |
|
||||||||||||| ||||| || | || || ||||||||||| || |||||| | ||||| ||| ||||||||||||||||| |||||||| |
|
|
| T |
6905899 |
tcaaaaagcattgtgtatatatccctatgcggatatgaaggattatcacgtgatatttttccttctctcatttggtcttggatgtcaccaacaa |
6905806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 6647 - 6828
Alignment:
| Q |
57 |
attctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaag |
156 |
Q |
| |
|
||||| || ||||||| ||||||||||| ||||| |||||||||||||| |||||||| || | || | || || ||||| |||| ||||||||||| |
|
|
| T |
6647 |
attctttctggatgttccaagattgacaaattggaggaggacttggaacagatggaatcattgaaaaccttgattgcggataagactgctataacaaaag |
6746 |
T |
|
| Q |
157 |
tgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttcc |
238 |
Q |
| |
|
| ||||||||| ||||| || |||| |||||| ||||| ||||| ||||| | ||||||||| || || ||||||||||| |
|
|
| T |
6747 |
ttcccttttcaatagtacgatctaaaaacattggatatatttctttatgtggatttgaaggattttcacgggatgtgtttcc |
6828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0813 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0813
Description:
Target: scaffold0813; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 277
Target Start/End: Complemental strand, 4919 - 4699
Alignment:
| Q |
57 |
attctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactggtataacaaaag |
156 |
Q |
| |
|
||||| || ||||||| ||||||||||| ||||| |||||||||||||| |||||||| || | || | || || ||||| |||| ||||||||||| |
|
|
| T |
4919 |
attctttctggatgttccaagattgacaaattggaggaggacttggaacagatggaatcattgaaaaccttgattgcggataagactgctataacaaaag |
4820 |
T |
|
| Q |
157 |
tgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttg |
256 |
Q |
| |
|
|||| |||||| |||||| | || || |||||| ||||| ||| | ||||| | ||||||||| || || ||||| ||||| | | || || ||||||| |
|
|
| T |
4819 |
tgccgttttcaatagtaagattaagaaacattggatatatttctctatgtggctttgaaggattttcacgagatgtatttccttttctcgttcggtcttg |
4720 |
T |
|
| Q |
257 |
gatggtaccaacaaataatgt |
277 |
Q |
| |
|
|||| |||| ||| |||||| |
|
|
| T |
4719 |
gatgtcaccatcaactaatgt |
4699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 3262740 - 3262637
Alignment:
| Q |
156 |
gtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtctt |
255 |
Q |
| |
|
||||||| |||| |||||| |||||||||||||| ||||| || | ||||| ||||| ||||| || |||||||| ||||| |||||||||||||||| |
|
|
| T |
3262740 |
gtgccctattcaatagtaagatcaaaaagcattggatatatatccctatgtggatatga-ggattttcacgtgatgtttttccctctatcatttggtctt |
3262642 |
T |
|
| Q |
256 |
ggatg |
260 |
Q |
| |
|
||||| |
|
|
| T |
3262641 |
ggatg |
3262637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 260
Target Start/End: Original strand, 31175824 - 31176038
Alignment:
| Q |
46 |
tgaaaactctcattctatcaggatgtttaaagattgacaagttggaagaggacttggaacaaatggaatctttaaccactctcatggcagataacactgg |
145 |
Q |
| |
|
|||||| ||||||||| || || |||| || ||||||||| |||||||| || | ||||||||||| || || ||| | || |||| || ||||| |
|
|
| T |
31175824 |
tgaaaagtctcattctttctggttgttcaatgattgacaaattggaagaagatatattgcaaatggaatccttgacaactttaattgcagcaaatactgg |
31175923 |
T |
|
| Q |
146 |
tataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatc |
245 |
Q |
| |
|
||| | | ||||||||| |||| ||| || ||||||||||||| ||||| ||| | ||||| ||||||||||| || |||| || ||||| ||| || |
|
|
| T |
31175924 |
tatcaaacaagtgccctattcaatagcaagatcaaaaagcattgcatatatatctctatgtggatatgaaggattatcatgtgacgtttttccttctctc |
31176023 |
T |
|
| Q |
246 |
atttggtcttggatg |
260 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
31176024 |
atttggtcttggatg |
31176038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 3407389 - 3407323
Alignment:
| Q |
204 |
tgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaa |
270 |
Q |
| |
|
||||| ||| ||||||| || |||||||| ||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
3407389 |
tgtggatatcaaggattatcacgtgatgtttttccttctatcatttggtcttggatgtcaccaacaa |
3407323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 3391629 - 3391536
Alignment:
| Q |
177 |
tcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatggtaccaacaa |
270 |
Q |
| |
|
|||||||||||||| ||||| ||| | ||||| ||||||||||| || | | |||| ||||| ||| ||||| ||||||||||| |||||||| |
|
|
| T |
3391629 |
tcaaaaagcattggatatatatctctatgtggatatgaaggattatcacatcatgtttttccttctctcattaggtcttggatgtcaccaacaa |
3391536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 3314966 - 3315049
Alignment:
| Q |
177 |
tcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatg |
260 |
Q |
| |
|
||||||| |||||| ||||| || | |||| |||||||| || || |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
3314966 |
tcaaaaaacattggatatatatccctatgtgaatatgaaggtttatcacgtgatgtttttccttctatcatttggtcttggatg |
3315049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 3364277 - 3364359
Alignment:
| Q |
177 |
tcaaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggat |
259 |
Q |
| |
|
|||||||||||||| ||||| ||| | ||||| ||||||||||| || | | |||| ||||| ||| ||||| |||||||||| |
|
|
| T |
3364277 |
tcaaaaagcattggatatatatctctatgtggatatgaaggattatcacatcatgtttttccttctctcattaggtcttggat |
3364359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 3325091 - 3325010
Alignment:
| Q |
179 |
aaaaagcattggctatatctctttgtgtgggtatgaaggattctcccgtgatgtgtttccgtctatcatttggtcttggatg |
260 |
Q |
| |
|
|||||||||||| ||||| || | ||||| ||||||||| | || | ||||| ||||| ||||||||||||||||||||| |
|
|
| T |
3325091 |
aaaaagcattggatatatatccctctgtggatatgaaggactatcacacgatgtttttccttctatcatttggtcttggatg |
3325010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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