View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9752_low_6 (Length: 354)
Name: NF9752_low_6
Description: NF9752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9752_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 44650302 - 44650636
Alignment:
| Q |
1 |
atgaattaccaaagttaacttaaaagtatacaatatggaagcacaaattaaggacgtgaattaccataacaacaattcacctataaattatacaatatgg |
100 |
Q |
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| T |
44650302 |
atgaattaccaaagttaacttaaaagtatacaatatggaagcacaaattaaggacgtgaactaccataacaataatttacctataaattataca-tatgg |
44650400 |
T |
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| Q |
101 |
aaggcagagaaagagcaaattaatcaaacattgaattatggagtacacaaagtgagaattcgggttcgagaagaatattggttgaaatggaaccaacgtt |
200 |
Q |
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| T |
44650401 |
aaggcagagaaagagcaaattaatcaaacattgaattatggagtacacaaagtgagaattcgggttcgagaagaatattgcttgaaatggaaccaacgtt |
44650500 |
T |
|
| Q |
201 |
tcaccgctattcttgttataataatctggaggtacataatatggaaatggtgttcctggtggaaaatatgaattttgtggtgggtatggagtcattggtg |
300 |
Q |
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| T |
44650501 |
tcaccgctattcttgttataataatctggaggtacataatatggaaatggtgttcctggtggaaaatatgaattttgtggtgggtatggagtcattggtg |
44650600 |
T |
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| Q |
301 |
gagattcacaattatttggacatggtgactttggag |
336 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
44650601 |
gagattcacaattatttggacatggtgactttggag |
44650636 |
T |
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