View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9753_1D_low_20 (Length: 332)
Name: NF9753_1D_low_20
Description: NF9753_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9753_1D_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 21 - 325
Target Start/End: Original strand, 10760527 - 10760831
Alignment:
| Q |
21 |
tcacgaacaaattgtacgttgtccaatccctccacgtggcgataatatatcacttatgataaaatccaacggtcccattaaaataaaaaagtcgtcaatc |
120 |
Q |
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| T |
10760527 |
tcacgaacaaattgtacgttgtccaatccctccacgtggtgagaatatatcacttatgataaaatccaacggtcccattcaaataaaaaagtcgtcaatc |
10760626 |
T |
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| Q |
121 |
cataattgggaaccactagtctacgaagctctcttcgatcacgacaacaccaccatcgtatttgtgaaaggccttaatctaagaccagagaaattaggtg |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
10760627 |
cataattgggaaccactagtctacgaagctctcttcgatcgcgacaacaccaccatcgtatttgtgaaaggccttaatctacgaccagagaaattaggtg |
10760726 |
T |
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| Q |
221 |
aaccctctagattccaatgtgtatatggttgggatttcacgaagcccaatttcttatttaaatctgatgttctatcagttgctcaagagattataagatg |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
10760727 |
aaccctctagattccaatgtgtatatggttgggatttcacgaagccgaatttcttatttaaatctgatgttctatcagttgctcaagagataataagatg |
10760826 |
T |
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| Q |
321 |
caaaa |
325 |
Q |
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||||| |
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| T |
10760827 |
caaaa |
10760831 |
T |
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