View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9753_2D_high_19 (Length: 259)
Name: NF9753_2D_high_19
Description: NF9753_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9753_2D_high_19 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 27774821 - 27775064
Alignment:
| Q |
1 |
taagcaaacgggaagggagtcatccctcagcatctgcaatataaaaatcaatgtaaggaaaaatatcttagagtagatgcaaatgttataatttgtagta |
100 |
Q |
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| T |
27774821 |
taagcaaacaggaagggagtcatccctcagcatctgcaatataaaaatcaatgtaaggaaaaatatcttagagtagatgcaaatgttatcatttgtagta |
27774920 |
T |
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| Q |
101 |
aaaaacaacaatagcatgtctgtttgatataattgaaaacaaagaagataaacaacagccgtagttatcctggtggttggaaaataaagatgtattctaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27774921 |
aaaaacaacaatagcatgtctgtttgatataattgaaaacaaagaagataaacaacagccgtagttatcctggtggttggaaaataaagatgtattctaa |
27775020 |
T |
|
| Q |
201 |
atttaacatgtcaaaagataaaaatgtaaaagataaatgatgtc |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27775021 |
atttaacatgtcaaaagataaaaatgtaaaagataaatgatgtc |
27775064 |
T |
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