View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9753_2D_high_29 (Length: 208)
Name: NF9753_2D_high_29
Description: NF9753_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9753_2D_high_29 |
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Alignment Details
Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 33121226 - 33121040
Alignment:
| Q |
1 |
catatattcaaatgtttataagtttaaaaattgctattttcaatattaaatctctacttttaatagaatccgccaagcttgagacttgggagaccgtaaa |
100 |
Q |
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| T |
33121226 |
catatattcaaatgtttagaagtttaaaaattgctattttcaatattaaatctctacttttaatagaaaccgccaagcttgagatttgggagaccgtaaa |
33121127 |
T |
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| Q |
101 |
acctctttcatcgaagcaagagagaaatggggagtgacttggtgctggaagagaaggagaggaagaagatattgcttgcaccagctt |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33121126 |
acctctttcatcgaagcaagagagaaatggggagtgacttggtgctggaagagaaggagaggaagaagatattgcttgcaccagctt |
33121040 |
T |
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