View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9753_high_33 (Length: 255)
Name: NF9753_high_33
Description: NF9753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9753_high_33 |
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Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 15 - 249
Target Start/End: Original strand, 6726957 - 6727190
Alignment:
| Q |
15 |
accttcaactgcttccatcaccactatagcaatccacgacaaaaatgtactatggaagtttataat--taatcctaataatgagtagtaaattaaaaatt |
112 |
Q |
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| T |
6726957 |
accttcaactgcttccatcaccactatagcaatccacgacaaaaatgtactatggaggtttataatcctaatcctaat---gagtagtaaattaaaaatt |
6727053 |
T |
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| Q |
113 |
ataagaatcaaataagacaacaaaatcactcttccaatacattttcttttgggggaaaaacgaaatataaaatgtgatgattgctaccttgaagcagtga |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
6727054 |
ataagaatcaaataagacaacaaaatcactcttccaatacattttcttttgggggaaaaccgaaatataaaatgtgatgattgctaccttgaagcagtga |
6727153 |
T |
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| Q |
213 |
tatttttgcatggctcgcttccacctccctttgcttc |
249 |
Q |
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| T |
6727154 |
tatttttgcatggctcgcttccacctccctctgcttc |
6727190 |
T |
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