View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9753_high_45 (Length: 235)
Name: NF9753_high_45
Description: NF9753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9753_high_45 |
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Alignment Details
Target: chr1 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 52 - 220
Target Start/End: Complemental strand, 37190308 - 37190140
Alignment:
| Q |
52 |
caacaacctctgctcctagacaggggccacatagtaagtagaatccacctctgatataatttcaattacagtaattcatggtttgacagaatcatggtta |
151 |
Q |
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| T |
37190308 |
caacaacctctgctcctagacaggggccacatagtaagtagaatccacctctgatataatttcaattacagcaattcatggtttgacagaatcatggtta |
37190209 |
T |
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| Q |
152 |
gccatcacaattttgcccaaagtatatgtagctcttgcaaaatcacagtagttcaccataatttctgtg |
220 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
37190208 |
gccatcacaattttgcccaaagtatatgtagttcttgcaaaatcacagtagttcaccataatttctgtg |
37190140 |
T |
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