View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9753_low_25 (Length: 342)

Name: NF9753_low_25
Description: NF9753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9753_low_25
NF9753_low_25
[»] chr3 (26 HSPs)
chr3 (6-336)||(53076932-53077262)
chr3 (6-336)||(19156902-19157233)
chr3 (6-336)||(27941480-27941810)
chr3 (6-336)||(10994113-10994444)
chr3 (6-336)||(25071444-25071783)
chr3 (6-336)||(15760668-15760999)
chr3 (12-300)||(52447988-52448277)
chr3 (105-334)||(24927913-24928143)
chr3 (54-332)||(1698232-1698511)
chr3 (57-160)||(10993087-10993190)
chr3 (57-293)||(11640007-11640243)
chr3 (57-171)||(47184940-47185054)
chr3 (57-171)||(29713781-29713895)
chr3 (57-160)||(44663339-44663442)
chr3 (57-171)||(23044911-23045025)
chr3 (56-145)||(3918144-3918234)
chr3 (54-171)||(30191182-30191298)
chr3 (57-145)||(12893051-12893139)
chr3 (57-160)||(53472108-53472210)
chr3 (57-171)||(31884971-31885085)
chr3 (57-171)||(6024780-6024894)
chr3 (91-145)||(17147219-17147273)
chr3 (54-207)||(1424636-1424785)
chr3 (57-122)||(4127548-4127612)
chr3 (14-53)||(1698728-1698767)
chr3 (57-167)||(6583948-6584058)
[»] chr8 (23 HSPs)
chr8 (6-336)||(31597330-31597662)
chr8 (13-336)||(3762506-3762830)
chr8 (6-336)||(45117275-45117606)
chr8 (6-336)||(1981400-1981736)
chr8 (6-336)||(16729540-16729870)
chr8 (6-336)||(4432036-4432366)
chr8 (12-336)||(7972951-7973276)
chr8 (12-334)||(7263602-7263925)
chr8 (12-311)||(40971278-40971576)
chr8 (12-160)||(39906233-39906378)
chr8 (57-171)||(9137509-9137624)
chr8 (57-168)||(9382240-9382351)
chr8 (57-141)||(24190360-24190444)
chr8 (180-286)||(18327212-18327318)
chr8 (185-334)||(39906039-39906186)
chr8 (57-160)||(11648769-11648871)
chr8 (55-171)||(6927559-6927675)
chr8 (57-171)||(28509226-28509340)
chr8 (57-158)||(32073246-32073347)
chr8 (57-171)||(2879232-2879346)
chr8 (14-54)||(9381812-9381852)
chr8 (57-141)||(28374580-28374662)
chr8 (107-153)||(18327379-18327425)
[»] chr1 (30 HSPs)
chr1 (6-336)||(34307410-34307741)
chr1 (12-336)||(27430760-27431085)
chr1 (6-336)||(17967288-17967619)
chr1 (6-336)||(21906188-21906519)
chr1 (6-328)||(5049270-5049595)
chr1 (6-336)||(22070312-22070643)
chr1 (12-336)||(48999216-48999535)
chr1 (6-336)||(48596316-48596640)
chr1 (16-334)||(25094976-25095295)
chr1 (16-334)||(23664082-23664395)
chr1 (57-292)||(9023068-9023302)
chr1 (6-83)||(26465140-26465217)
chr1 (57-157)||(49229352-49229452)
chr1 (89-160)||(47397574-47397645)
chr1 (57-142)||(5509870-5509955)
chr1 (57-170)||(12027763-12027876)
chr1 (56-160)||(5209694-5209798)
chr1 (57-161)||(24185680-24185783)
chr1 (57-171)||(36296668-36296782)
chr1 (57-171)||(26221650-26221764)
chr1 (57-171)||(28945834-28945948)
chr1 (57-171)||(42722203-42722317)
chr1 (56-145)||(17385406-17385494)
chr1 (68-157)||(48646143-48646232)
chr1 (57-157)||(41665592-41665691)
chr1 (83-227)||(44310372-44310518)
chr1 (6-57)||(44310737-44310788)
chr1 (24-54)||(12028222-12028252)
chr1 (57-122)||(47559566-47559630)
chr1 (243-311)||(36296540-36296608)
[»] chr6 (24 HSPs)
chr6 (6-336)||(22012080-22012409)
chr6 (6-336)||(1603179-1603509)
chr6 (6-334)||(34043349-34043684)
chr6 (12-336)||(1422764-1423089)
chr6 (6-336)||(1131582-1131914)
chr6 (12-336)||(18675162-18675487)
chr6 (12-301)||(20990281-20990573)
chr6 (6-129)||(21442654-21442777)
chr6 (244-336)||(21442560-21442652)
chr6 (89-329)||(26212910-26213150)
chr6 (56-312)||(15060002-15060256)
chr6 (54-332)||(26817175-26817448)
chr6 (57-171)||(11680872-11680986)
chr6 (57-171)||(31129720-31129833)
chr6 (57-160)||(3229212-3229314)
chr6 (57-171)||(19107911-19108025)
chr6 (91-230)||(13758826-13758966)
chr6 (57-143)||(33516641-33516727)
chr6 (57-157)||(4065602-4065702)
chr6 (6-53)||(13758549-13758596)
chr6 (58-135)||(4090808-4090885)
chr6 (81-122)||(22524750-22524791)
chr6 (6-55)||(26817710-26817759)
chr6 (279-311)||(4091022-4091054)
[»] chr2 (35 HSPs)
chr2 (6-336)||(44314007-44314336)
chr2 (6-336)||(44322186-44322515)
chr2 (6-334)||(33015157-33015486)
chr2 (6-336)||(6221194-6221526)
chr2 (12-336)||(19685605-19685925)
chr2 (12-334)||(2553868-2554190)
chr2 (12-334)||(22575954-22576276)
chr2 (12-334)||(41825934-41826256)
chr2 (6-312)||(27861785-27862074)
chr2 (57-330)||(11199300-11199573)
chr2 (56-171)||(33054748-33054863)
chr2 (55-231)||(14903938-14904115)
chr2 (59-160)||(38566216-38566317)
chr2 (57-232)||(19091198-19091374)
chr2 (58-224)||(41302463-41302629)
chr2 (57-160)||(30386840-30386942)
chr2 (59-160)||(10022896-10022997)
chr2 (57-171)||(13597890-13598003)
chr2 (57-171)||(38422951-38423065)
chr2 (89-171)||(41422922-41423004)
chr2 (55-171)||(45277504-45277620)
chr2 (57-160)||(24484462-24484565)
chr2 (57-171)||(7880374-7880488)
chr2 (57-171)||(2565587-2565701)
chr2 (57-143)||(19678022-19678108)
chr2 (57-169)||(29303144-29303256)
chr2 (58-157)||(43673290-43673389)
chr2 (58-145)||(6882999-6883088)
chr2 (57-158)||(18781197-18781298)
chr2 (57-114)||(41422864-41422921)
chr2 (272-336)||(7443970-7444035)
chr2 (58-119)||(9425217-9425278)
chr2 (57-98)||(25416076-25416117)
chr2 (90-158)||(9057388-9057456)
chr2 (6-54)||(31548826-31548874)
[»] chr7 (33 HSPs)
chr7 (6-336)||(8389263-8389594)
chr7 (6-336)||(31072488-31072821)
chr7 (6-336)||(4539677-4540001)
chr7 (6-336)||(20394749-20395082)
chr7 (12-334)||(35477947-35478270)
chr7 (12-334)||(13753926-13754249)
chr7 (12-334)||(18667179-18667502)
chr7 (6-139)||(1623572-1623704)
chr7 (57-171)||(39038906-39039020)
chr7 (57-160)||(41822150-41822253)
chr7 (57-160)||(21863585-21863688)
chr7 (57-168)||(29636906-29637017)
chr7 (59-170)||(40934025-40934135)
chr7 (57-160)||(24441942-24442045)
chr7 (57-160)||(43179440-43179542)
chr7 (57-158)||(44733624-44733724)
chr7 (57-145)||(28460258-28460345)
chr7 (57-171)||(6189418-6189532)
chr7 (57-171)||(48636668-48636782)
chr7 (66-139)||(3124281-3124354)
chr7 (95-171)||(5770852-5770928)
chr7 (57-141)||(9420460-9420544)
chr7 (85-145)||(23381105-23381165)
chr7 (56-146)||(8113929-8114017)
chr7 (191-330)||(44733341-44733480)
chr7 (57-171)||(48238426-48238539)
chr7 (57-122)||(8069595-8069660)
chr7 (6-54)||(14574177-14574225)
chr7 (56-145)||(35118262-35118348)
chr7 (185-226)||(43824168-43824209)
chr7 (57-121)||(10015748-10015812)
chr7 (6-54)||(21863951-21863999)
chr7 (180-232)||(28460368-28460420)
[»] chr5 (28 HSPs)
chr5 (6-336)||(13382564-13382896)
chr5 (6-336)||(2676774-2677104)
chr5 (6-336)||(23962660-23962990)
chr5 (6-336)||(18888877-18889208)
chr5 (12-336)||(9409522-9409847)
chr5 (12-336)||(42879404-42879729)
chr5 (14-336)||(13490198-13490522)
chr5 (12-336)||(5578578-5578900)
chr5 (6-334)||(39537363-39537680)
chr5 (56-293)||(13826234-13826471)
chr5 (57-293)||(16040201-16040438)
chr5 (57-169)||(29789522-29789634)
chr5 (69-261)||(20892294-20892487)
chr5 (57-160)||(13820884-13820987)
chr5 (57-160)||(29149639-29149741)
chr5 (57-171)||(38491012-38491126)
chr5 (57-154)||(8806334-8806430)
chr5 (81-160)||(43171438-43171517)
chr5 (57-171)||(7850280-7850394)
chr5 (56-122)||(37134752-37134818)
chr5 (54-200)||(38915727-38915872)
chr5 (57-141)||(3654677-3654760)
chr5 (57-160)||(5121205-5121308)
chr5 (56-171)||(6769377-6769489)
chr5 (185-312)||(37134620-37134748)
chr5 (6-55)||(13820575-13820624)
chr5 (57-121)||(32698782-32698846)
chr5 (6-54)||(43170985-43171033)
[»] chr4 (39 HSPs)
chr4 (6-335)||(10094986-10095318)
chr4 (12-334)||(7413714-7414036)
chr4 (12-334)||(7459795-7460117)
chr4 (12-336)||(39480221-39480548)
chr4 (10-336)||(36213544-36213868)
chr4 (57-332)||(52458830-52459105)
chr4 (57-332)||(52460087-52460362)
chr4 (42-228)||(6261581-6261768)
chr4 (55-231)||(13957165-13957341)
chr4 (195-336)||(6261771-6261913)
chr4 (57-160)||(9921866-9921969)
chr4 (57-232)||(10142056-10142232)
chr4 (57-171)||(1843173-1843287)
chr4 (57-147)||(42512246-42512336)
chr4 (57-145)||(3665478-3665565)
chr4 (57-121)||(24611366-24611430)
chr4 (57-143)||(51337645-51337731)
chr4 (57-171)||(28143470-28143584)
chr4 (57-224)||(9900077-9900244)
chr4 (101-168)||(23935836-23935903)
chr4 (109-160)||(24612043-24612094)
chr4 (57-171)||(14192338-14192452)
chr4 (57-159)||(41509209-41509310)
chr4 (60-232)||(29283029-29283200)
chr4 (14-54)||(10142609-10142649)
chr4 (57-156)||(10373387-10373485)
chr4 (6-57)||(28803858-28803909)
chr4 (55-117)||(25201039-25201101)
chr4 (57-122)||(21320037-21320101)
chr4 (6-55)||(52460632-52460681)
chr4 (16-55)||(3665154-3665193)
chr4 (55-118)||(51890445-51890508)
chr4 (55-118)||(51890719-51890782)
chr4 (12-55)||(52459375-52459418)
chr4 (6-55)||(31915559-31915608)
chr4 (247-322)||(9922054-9922130)
chr4 (243-311)||(51337489-51337557)
chr4 (184-228)||(51758369-51758413)
chr4 (57-121)||(56366890-56366954)
[»] scaffold0016 (5 HSPs)
scaffold0016 (31-302)||(87622-87892)
scaffold0016 (31-334)||(89048-89352)
scaffold0016 (27-334)||(88092-88401)
scaffold0016 (31-334)||(88572-88877)
scaffold0016 (240-330)||(87358-87448)
[»] scaffold0093 (1 HSPs)
scaffold0093 (66-336)||(50737-51008)
[»] scaffold0308 (1 HSPs)
scaffold0308 (240-336)||(12290-12386)
[»] scaffold1266 (2 HSPs)
scaffold1266 (57-170)||(1289-1402)
scaffold1266 (6-54)||(1665-1713)
[»] scaffold0263 (2 HSPs)
scaffold0263 (57-160)||(18614-18717)
scaffold0263 (6-54)||(18305-18353)
[»] scaffold0178 (1 HSPs)
scaffold0178 (57-160)||(2444-2547)
[»] scaffold0160 (1 HSPs)
scaffold0160 (57-160)||(25104-25207)
[»] scaffold0116 (1 HSPs)
scaffold0116 (57-160)||(40802-40905)
[»] scaffold0743 (1 HSPs)
scaffold0743 (57-143)||(3318-3404)
[»] scaffold1364 (1 HSPs)
scaffold1364 (57-117)||(873-933)
[»] scaffold0137 (1 HSPs)
scaffold0137 (56-145)||(21454-21544)
[»] scaffold0002 (1 HSPs)
scaffold0002 (57-117)||(98365-98425)


Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 53076932 - 53077262
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  53076932 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatcccaattt 53077031  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnntcataaatttcttcgataataaattt 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        |||  |||||||||||||||||||||    
T  53077032 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagcaaagggcccaaaaaatatcaccaatttcttcgataataaattt 53077131  T
Q  206 ttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaagg 305  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||  |    
T  53077132 ttgagcatattatcaagaacaaccaaatttttttataggagggtgtatatagaaaattttgtgttacatgggatatatatagcaaatctcactaaaagag 53077231  T
Q  306 ccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||||||||||||| ||||| ||||||    
T  53077232 ccaaaaatactaacagatatcagctcattcc 53077262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 19157233 - 19156902
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||    
T  19157233 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgttttgttatgaaaattatcctcattt 19157134  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||         |||| ||||||||||||||||||||    
T  19157133 cttggataataaatatcgtcgatatttttaatattaatgaagcacattattaggaacaaagggcccaaaaaaatatcatcaatttcttcgataataaatt 19157034  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  19157033 tttgagcatattatcaagaacaaccaaatttttttataggagggtgtatatagaaatatttgtgttacatgggatatatatagcaaatctcactaaaagg 19156934  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    ||||||||||||||||||||||||||||||||    
T  19156933 gccaaaaatactaacagatgtcagcccattcc 19156902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 27941480 - 27941810
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  27941480 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatcccaattt 27941579  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnntcataaatttcttcgataataaattt 205  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||| |||||||  |||||||||        |||  |||||||||||||||||||||    
T  27941580 cttggataataaatatcttcgatatttttaatattaatgaagcacataattaggaacaaagggcccaaaaaaaatcaccaatttcttcgataataaattt 27941679  T
Q  206 ttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaagg 305  Q
    |||||||||||||||||||||||||||       | ||||||||||||||| |  | |||||||| ||||||||||||||||||||||||||||||| ||    
T  27941680 ttgagcatattatcaagaacaaccaaatttttttacaggagggtgtatataaatttttttgtgttacatgggatatatatagcaaatctcactaaaaggg 27941779  T
Q  306 ccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||||||||| ||||||||| ||||||    
T  27941780 ccaaaaatactaactgatgtcagctcattcc 27941810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 10994113 - 10994444
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  10994113 agaagtagaaaaaaatagcaaatgcgaagtagactgaaattttagcaccctattttcaactaaaatataatttgctttgttatgaaaattatcccaattt 10994212  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||         |||  ||||||||||||||||||||    
T  10994213 cttggataataaatatcgtcgatatttttaatattagcgaagcacattattaggaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 10994312  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    ||||||| ||||| ||||||||||||||       |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||      
T  10994313 tttgagcgtattaccaagaacaaccaaatttttttataggagggtgtatatagaaatttttgtgttacatgggatatatatagcaaatctcactaaaaga 10994412  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||||| ||||| |||||||||||||||    
T  10994413 gccaaaaatattaacaaatgtcagcccattcc 10994444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 25071783 - 25071444
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||  |||||    
T  25071783 agaagtagagaaaaatagcacatgagaagtagactgaaattatagcaccctattttcaactaaaatagaatttgctctgttatgaaaattatctcaattt 25071684  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||         |||  ||||||||||||||||||||    
T  25071683 cttggataataaatatcgtcgatatttttaatattagtgaagcacattattaggaaaaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 25071584  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgc--------atgggatatatatagcaaatctca 296  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||| |        ||||||||||||| ||||||||||    
T  25071583 tttgagcatattatcaagaacaaccaattttttttataggagggtgtatatagaaatttttgtgttacatgggaatatgggatatatatggcaaatctca 25071484  T
Q  297 ctaaaaaggccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  25071483 ctaaaagggccgaaaatactaacagatgtcagcccattcc 25071444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 15760999 - 15760668
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||| ||||| ||||||||||| |||||    
T  15760999 agaagtagagaaaaataacacatgtgaagtagacggaaattttagcactccattttcaactaaaataaaatttgctatgttatgaaaattatcccaattt 15760900  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnn-tcataaatttcttcgataataaatt 204  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||| ||  ||||| |||         |||   |||||||||||||||||||    
T  15760899 cttggataataaatatcgtcgatatttttaaaattagtgaagcacgttattaagaacaaaggacccaaaaaaatatcacctatttcttcgataataaatt 15760800  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    ||||||||||||||||||| ||||||||       |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |    
T  15760799 tttgagcatattatcaagatcaaccaaatttttttataggagggtgtatatagaaatttttgtgttacatgggatatatatagcaaatctcactaaaagg 15760700  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    || ||||||||||||||||||||| |||||||    
T  15760699 gcaaaaaatactaacagatgtcagtccattcc 15760668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 12 - 300
Target Start/End: Complemental strand, 52448277 - 52447988
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| | |||||||||   |||||||||||    
T  52448277 agagaaaaatagcacatgcgaagtagactgaaattttagcaccccattatcaaataaaatagaatttgctttgtaatgaaaattatatcaatttcttgga 52448178  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| ||  |||||||||         |||  ||||||||||||||||||||||  ||    
T  52448177 taataaatatcgtcgatatttttaatattagtgaaacacattattaagaacaaagggcccaataaaatatcactaatttcttcgataataaattttcaag 52448078  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaa 300  Q
    |||||||| ||||||| |||||       |||||||||||||||||||||| |||||| ||||| ||||||||||||  |||||||||||    
T  52448077 catattattaagaacatccaaaaaaaattataggagggtgtatatagaaatttttgtgctgcataggatatatatagtgaatctcactaa 52447988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 105 - 334
Target Start/End: Original strand, 24927913 - 24928143
Alignment:
Q  105 tcttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnn-tcataaatttcttcgataataaat 203  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||         |||  |||||||||||||||||||    
T  24927913 tcttggataataaatatcgtcgatatttttaatattagtgaagcacattattaagaacaaagggcccaataaaatatcactaatttcttcgataataaat 24928012  T
Q  204 ttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaa 303  Q
    |||  |||||||||| ||| | | |||||       ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  24928013 tttcaagcatattattaagtaaagccaaaattttttataggagggtgtatatagaaatatttgtgctgcatgggatatatatagcaaatctcactaaaag 24928112  T
Q  304 ggccaaaaatactaacagatgtcagcccatt 334  Q
    ||| ||||| | ||| |||| ||||||||||    
T  24928113 ggcaaaaaacattaatagatttcagcccatt 24928143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 54 - 332
Target Start/End: Complemental strand, 1698511 - 1698232
Alignment:
Q  54 cctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacatt 153  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  1698511 cctattttcaacttaaatagaatttgttttgttaggaaaattatctcaatttcttggataataaatatcatcgatatttttaatattagtgaagcacatt 1698412  T
Q  154 attaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgta 252  Q
    ||||| |  ||||| |||         |||  |||||||||||||||||||| || |||||||||| || |||||||||        ||||||| |||||    
T  1698411 attagaaacaaaggccccaaaaaaatatcactaatttcttcgataataaattctttagcatattattaataacaaccaattttttttataggagagtgta 1698312  T
Q  253 tatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatactaacagatgtcagccca 332  Q
    ||||||| | |||||| | |||||| ||||||||| ||||| ||| | || ||||||| | | |||||||| ||||||||    
T  1698311 tatagaattttttgtgctacatggggtatatataggaaatcgcaccagaagggccaaatacattaacagatttcagccca 1698232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 10993087 - 10993190
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||||| | ||||||||    
T  10993087 attttcaactaaaatgaaatttgttttgttatgaaaattatccaaatttcttggataataaatatcaccaatatttttaatattagtgaggcacattatt 10993186  T
Q  157 agga 160  Q
    ||||    
T  10993187 agga 10993190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 293
Target Start/End: Original strand, 11640007 - 11640243
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||  ||||||| ||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||| |||    
T  11640007 attttcaactaaaataaaatttattttgttatgaaaattatcccaatttcttgaataataaatatcatcgatatttttaatattagtgaggtacatcatt 11640106  T
Q  157 aggagtaaagggcccnnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatata 256  Q
    | || |||||| ||         |||  ||||| || | ||||||||||||||||| || || || || |||||||       ||| |||||||||||||    
T  11640107 atgaataaaggaccaaacaaatatcaccaatttgtttgctaataaatttttgagcacataattaaaaataaccaaatttatttatatgagggtgtatata 11640206  T
Q  257 gaaatatttgtgttgcatgggatatatatagcaaatc 293  Q
    ||| | | |||| | |||| ||| |||||||||||||    
T  11640207 gaagtttatgtgctacatgagatgtatatagcaaatc 11640243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 47185054 - 47184940
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||||||| ||||| ||||||||||||||||  | |||||| |||||||||||||| ||||||||    
T  47185054 attttcaactaaaatataatttgttttgttatgaaaattatcccaatttattggataataaatatcaccaatatttgtaatattagtgaagaacattatt 47184955  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  47184954 aggaagaaagggccc 47184940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 29713895 - 29713781
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||||||| |||||||| |||||||||||||  | ||||||||||||||||||| | ||||||||    
T  29713895 attttcaactaaaatataatttgttttgttatgaaaattatcccaatttcttagataataaatatcaccaatatttttaatattagtgaggcacattatt 29713796  T
Q  157 aggagtaaagggccc 171  Q
    || |  |||||||||    
T  29713795 agtaacaaagggccc 29713781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 44663339 - 44663442
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||  |||||||||   ||||||||||||||||||||||  | |||| |||||||||||||| | ||||||||    
T  44663339 attttcaactaaaatataatttgttttgttttgaaaattatttcaatttcttggataataaatatcaccaatatatttaatattagtgaggcacattatt 44663438  T
Q  157 agga 160  Q
    ||||    
T  44663439 agga 44663442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 23044911 - 23045025
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||| ||| |||||  |||||||||||||||    || |||||||||||||| |   ||||||||    
T  23044911 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatctttttaatattagtaagacacattatt 23045010  T
Q  157 aggagtaaagggccc 171  Q
    |||| ||||||||||    
T  23045011 aggaataaagggccc 23045025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 3918144 - 3918234
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattat-ccaaatttcttggataataaatatcgtcgatatttttaatattagtga 145  Q
    |||||||||||||||||||||||| ||||||| || |||||| |||| ||| |||||| |||||||||  | | |||||||||||||||||    
T  3918144 tattttcaactaaaatagaatttgttttgttatgagaattatcccaacttttttggatgataaatatcaccaacatttttaatattagtga 3918234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 30191182 - 30191298
Alignment:
Q  54 cctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacatt 153  Q
    ||||||||||||||||||| |||||  |||||||  |||||||||  ||||| |||||||||||||||     |||| |||||||||||||||  |||||    
T  30191182 cctattttcaactaaaatataatttcttttgttat-aaaattatctcaattttttggataataaatatgactaatatatttaatattagtgaaacacatt 30191280  T
Q  154 attaggagtaaagggccc 171  Q
    ||||||| |||| |||||    
T  30191281 attaggaataaatggccc 30191298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 12893139 - 12893051
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtga 145  Q
    |||||||||||||||||||| || ||| |||  |||||||||  |||||||||||||||||| |||  | |||| ||||||||||||||    
T  12893139 attttcaactaaaatagaatatgttttcttataaaaattatctcaatttcttggataataaacatcaccaatatatttaatattagtga 12893051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 53472210 - 53472108
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| |||||||  |||||||||  ||||||||||||||||||| ||  | || |||||||||  ||||| || |||||||    
T  53472210 attttcaactaaaatataatttgttttgttattaaaattatctcaatttcttggataataaatttcaccaat-tttttaatacgagtgaggtgcattatt 53472112  T
Q  157 agga 160  Q
    ||||    
T  53472111 agga 53472108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 31884971 - 31885085
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||  ||||||| || |||| ||| |||||  |||||||||||||||    ||||||||||||||||| |   ||||||||    
T  31884971 attttcaactaaaatataatttattttgttatgagaattttcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 31885070  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  31885071 aggaacaaagggccc 31885085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 6024780 - 6024894
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||| |||||||||  ||||| ||||||| ||| ||| ||| |||||  |||||||||||||||    ||||||||||||||||| |  |||||||||    
T  6024780 attttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaatatcacatatatttttaatattagtaagatacattatt 6024879  T
Q  157 aggagtaaagggccc 171  Q
    || |  |||||||||    
T  6024880 agcaacaaagggccc 6024894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 17147273 - 17147219
Alignment:
Q  91 aaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtga 145  Q
    ||||||| | ||||||||||||||||||||||  | |||||||||||||||||||    
T  17147273 aaattattccaatttcttggataataaatatcaccaatatttttaatattagtga 17147219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 207
Target Start/End: Complemental strand, 1424785 - 1424636
Alignment:
Q  54 cctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacatt 153  Q
    ||||||||||||||||||| | |||  |||||||  |||||||||| |||||||||||||||||||| || | | || | |||||||||||| | |||||    
T  1424785 cctattttcaactaaaatatattttt-tttgttat-aaaattatcccaatttcttggataataaata-cgacta-atatataatattagtgaggcacatt 1424690  T
Q  154 attaggagtaaagggcccnnnnnnnntcataaatttcttcgataataaattttt 207  Q
    |||||||  |||||| ||        ||||||||||||| |||||||| |||||    
T  1424689 attaggaacaaagggtcccaaaaatatcataaatttctttgataataatttttt 1424636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 4127612 - 4127548
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatc 122  Q
    |||||||||||||| | | |||| ||||||| ||||||||||  ||||||||||||||||||||||    
T  4127612 attttcaactaaaaaatactttg-tttgttaagaaaattatctcaatttcttggataataaatatc 4127548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 1698767 - 1698728
Alignment:
Q  14 agaaaaatagcacatgtgaagtagactgaaattttagcac 53  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  1698767 agaataatagcacatgcgaagtagactgaaattttagcac 1698728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 6584058 - 6583948
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||  |||||   ||| ||| |||||||||  |||||| ||||||||    ||||||||||||||||| |   ||||||||    
T  6584058 attttcaactaaaatataatttattttgtggtgaagattctccaaattttatggatattaaatatcacaaatatttttaatattagtaagacacattatt 6583959  T
Q  157 aggagtaaagg 167  Q
    |||| ||||||    
T  6583958 aggaataaagg 6583948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 31597662 - 31597330
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  31597662 agaagtagagaaaaatagcacatgtgaagtagaatgaaattttggcaccctattttcaactaaaatagaatttgctttgttatgaaaattatcccaattt 31597563  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||         |||  ||||||||||||||||||||    
T  31597562 cttggataataaatatcgtcgatatttttaatattagtgaagcacattattaggagtaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 31597463  T
Q  205 tttgagcatattatcaagaacaacc-aaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaa 303  Q
    ||||||||||||||||||||||||| |||       |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||     
T  31597462 tttgagcatattatcaagaacaaccaaaaaaattttataggagggtgtatatagaaacttttgtgttacatgggatatatatagcaaatctcactaaaag 31597363  T
Q  304 ggccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||||||||||||||||||||||||||||    
T  31597362 ggccaaaaatactaacagatgtcagcccattcc 31597330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 336
Target Start/End: Complemental strand, 3762830 - 3762506
Alignment:
Q  13 gagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  3762830 gagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggat 3762731  T
Q  113 aataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagc 211  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||  |||||||||         |||  ||||||||||||||||||||||| |||    
T  3762730 aataaatatcgtagatatttttaatattagtgaaacacattattaggaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatttttaagc 3762631  T
Q  212 atattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaa 311  Q
    |||||||||||||||||||||       |||||||||||| |||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||    
T  3762630 atattatcaagaacaaccaaatttttttataggagggtgtgtatagaaatatttgtgttacatatgatatatatagcaaatctcactaaaagggccaaaa 3762531  T
Q  312 atactaacagatgtcagcccattcc 336  Q
    |||||||||||||||| ||||||||    
T  3762530 atactaacagatgtcaacccattcc 3762506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 45117606 - 45117275
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  45117606 agaagtagaaaaaaatagcaaatgcgaagtagactgaaattttagcaccctattttcaactaaaatataatttgctttgttatgaaaattatcccaattt 45117507  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||         |||  ||||||||||||||||||||    
T  45117506 cttggataataaatatcgtcgatatttttaatattagcgaagcacattattaggaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 45117407  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||      
T  45117406 tttgagcatattatcaagaacaaccaaatatttttataggagggtgtatatagaaatttttgtgttacatgggatatatatagcaaatctcactaaaaga 45117307  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||||||||||| |||||||||||||||    
T  45117306 gccaaaaatactaacaaatgtcagcccattcc 45117275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 1981736 - 1981400
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  1981736 agaagtagagaaaaatagcatatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatcccaattt 1981637  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaa-- 202  Q
    |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||  |||| ||||         |||  |||||||||||||||| |      
T  1981636 cttggataataaatatcgtcaatatttttaatattaatgaagcacattattaggaacaaagagcccaaaaaaatatcaccaatttcttcgataatacatt 1981537  T
Q  203 -tttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatggg--atatatatagcaaatctcacta 299  Q
     ||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  1981536 ttttttgagcatataatcaagaacaaccaaatttttttataggagggtgtatatagaaatatttgtgttacatgggatatatatatagcaaatctcacta 1981437  T
Q  300 aaaaggccaaaaatactaacagatgtcagcccattcc 336  Q
    ||| |||||||||||||||||||||||||||||||||    
T  1981436 aaagggccaaaaatactaacagatgtcagcccattcc 1981400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 16729870 - 16729540
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| | || ||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  16729870 agaagtagagaaaaatagcacatgcgaagtagactgaaattttagtagcccattttcaactaaaatagaatttgctttgttaagaaaattatcccaattt 16729771  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||         |||  ||||||||||||||||||||    
T  16729770 cttggataataaatatcgtcgatatttttaatattagtgaagcacattattaagaaaaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 16729671  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    || ||||||||||| || ||||||| ||       |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||| |    
T  16729670 ttcgagcatattattaaaaacaacc-aatttttttataggagggtgtatatagaaatttttgtgctgcatgggatatatatagcaaatctctctaaaagg 16729572  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||| | |||||||| ||||||||||||    
T  16729571 gccaaaaacattaacagatttcagcccattcc 16729540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 4432036 - 4432366
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||||   |||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  4432036 agaagtagagaaaaatagcacatgcgaagtagacttaaattttagcacttcattttcaactaaaataaaatttgctttgttatgaaaattatcccaattt 4432135  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnntcataaatttcttcgataataaattt 205  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||| |||||        |||| |||||||||||||||||||||    
T  4432136 cttggataataaatattgtcaatatttttaatattagtgaagtacattattaggaacaaacggcccaaaaactatcatcaatttcttcgataataaattt 4432235  T
Q  206 ttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaagg 305  Q
      ||||||||| | |||||||||||||       |||||||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||| ||    
T  4432236 ccgagcatatttttaagaacaaccaaatttttttataggagggtgtatatagaaat-tttgtgctgcatgggatatatatagcaaattgcactaaaaggg 4432334  T
Q  306 c-caaaaatactaacagatgtcagcccattcc 336  Q
    |  ||||| |  ||||||| ||||||||||||    
T  4432335 caaaaaaacataaacagatttcagcccattcc 4432366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 12 - 336
Target Start/End: Original strand, 7972951 - 7973276
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    ||||||||||||||||||    ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  7972951 agagaaaaatagcacatgcatggtaaactaaaattttagcaccccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttgga 7973050  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagg-gcccnnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    ||| |||||||||||||||||||||||||||||||| |||||||||| |  |||||  ||         |||| ||||||||||||||||||||||||||    
T  7973051 taaaaaatatcgtcgatatttttaatattagtgaagcacattattagaaacaaaggatccaaaaaaatatcattaatttcttcgataataaatttttgag 7973150  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| |||||||||||||       |||||||||||||||||||||||||||||   ||||| |||||||||| |||||||||||||| |||||||    
T  7973151 catattattaagaacaaccaaaaaaaattataggagggtgtatatagaaatatttgtgccacatggaatatatatagtaaatctcactaaaagggccaaa 7973250  T
Q  311 aatactaacagatgtcagcccattcc 336  Q
    || |  ||||||| |||| |||||||    
T  7973251 aacatcaacagatttcagtccattcc 7973276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 12 - 334
Target Start/End: Original strand, 7263602 - 7263925
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||  |||| |||||||||||||||||||| ||| |||| ||||||||||||| |||||| | ||||||||||  |||||||||||    
T  7263602 agagaaaaatagcacatccgaagcagactgaaattttagcaccccattatcaaataaaatagaatttactttgtaatgaaaattatctcaatttcttgga 7263701  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| ||  |||||||||         |||  ||||||||||||||||||||||  |     
T  7263702 taataaatatcgtcgatatttttaatattagcgaagcacattattaagaacaaagggcccaataaaatatcactaatttcttcgataataaattttcaaa 7263801  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| ||||||||||||        |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | ||| |||    
T  7263802 catattattaagaacaaccaattttttttataggagggtgtatatagaaatttttgtgctgcatgggatatatatagcaaatctcactaatagggcaaaa 7263901  T
Q  311 aatactaacagatgtcagcccatt 334  Q
    || | ||| |||| |||| |||||    
T  7263902 aacattaatagatttcagtccatt 7263925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 40971576 - 40971278
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||||||||||  |||||||||||    
T  40971576 agagaaaaatagcacatgtgaagtagactgaaattttagcaccccattttcaaataaaatagaatttgctttgtaatgaaaattatctcaatttcttgga 40971477  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaaggg-cccnnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| ||  |||||| ||         |||  ||||||||| ||||||||||||  ||    
T  40971476 taataaatatcgtcgatatttttaatattagtgaaacacattattaagaacaaagggtccaaaaaaatatcactaatttcttcaataataaattttcaag 40971377  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| ||||||| ||||        ||| |||||||||||||| ||| |||||| ||||||| ||||||||| | ||||||||||||| ||| |||    
T  40971376 catattattaagaacagccaa--ttttttataagagggtgtatataggaatttttgtgctgcatggaatatatataacgaatctcactaaaagggcaaaa 40971279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 39906378 - 39906233
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||| |   ||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| | ||||| |||||    
T  39906378 agagaaaaatagcacatgcg---tagactgaaattttagcaccccattttcaactaaaatagaatttgctttgttataaaaattattccaatttattgga 39906282  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattagga 160  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  39906281 taataaataacgtcgatatttttaatattagtgaagcacattattagga 39906233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 9137624 - 9137509
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatcca-aatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattat 155  Q
    |||||||||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||  | |||||||||||||||||||   |||||||    
T  9137624 attttcaactaaaatataatttgttttgttatgaaaattatccacaatttcttggataataaatatcaccaatatttttaatattagtgagacacattat 9137525  T
Q  156 taggagtaaagggccc 171  Q
    |||||  |||||||||    
T  9137524 taggaacaaagggccc 9137509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 9382240 - 9382351
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||||||| ||||  || |||| ||||||||  | ||||||||||||||||||||| ||||||||    
T  9382240 attttcaactaaaatataatttgttttgttatgaaaattatcccaattcattagatagtaaatatcaccaatatttttaatattagtgaagcacattatt 9382339  T
Q  157 aggagtaaaggg 168  Q
    |||| |||||||    
T  9382340 aggaataaaggg 9382351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 24190360 - 24190444
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatatta 141  Q
    |||||||||||||||| |||||| |||||||  |||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  24190360 attttcaactaaaatataatttgttttgttataaaaattatcccaatttcttggataataaatatcatcaatatttttaatatta 24190444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 18327318 - 18327212
Alignment:
Q  180 tcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggat 279  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||| ||        |||||||||||||||||||||| ||| || | ||||||||    
T  18327318 tcatcaatttcttcgataataaatttttgagcatattattaagaacaactaattttttttataggagggtgtatatagaaatgtttctgctacatgggat 18327219  T
Q  280 atatata 286  Q
    |||||||    
T  18327218 atatata 18327212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 334
Target Start/End: Complemental strand, 39906186 - 39906039
Alignment:
Q  185 aatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatata 284  Q
    |||||||| ||||||| ||||| || |||||||| |||||||||||||       ||| ||||| |||||||||||| |||||| |||||| ||||||||    
T  39906186 aatttctttgataatatattttcgaccatattattaagaacaaccaaatttttttatatgagggggtatatagaaat-tttgtgctgcatgagatatata 39906088  T
Q  285 tagcaaatctcactaaaaaggccaaaaatactaacagatgtcagcccatt 334  Q
    |||||||||||||| ||| ||||||||| |  ||||||| |||| |||||    
T  39906087 tagcaaatctcact-aaagggccaaaaacatcaacagatttcagtccatt 39906039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 11648769 - 11648871
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| |||||||  |||||||||  |||||||| |||||||||||||  | ||||||||||||||||||| | ||||||||    
T  11648769 attttcaactaaaatataatttgttttgttat-aaaattatctcaatttctttgataataaatatcaccaatatttttaatattagtgaggcacattatt 11648867  T
Q  157 agga 160  Q
    ||||    
T  11648868 agga 11648871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 6927559 - 6927675
Alignment:
Q  55 ctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacatta 154  Q
    |||||||||||||||||| |||||| ||||||| ||||||| ||| |||||  |||||||||||||||    ||||||||||||||||| |   ||||||    
T  6927559 ctattttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacatta 6927658  T
Q  155 ttaggagtaaagggccc 171  Q
    ||||||  |||||||||    
T  6927659 ttaggaacaaagggccc 6927675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 28509340 - 28509226
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||| ||| |||||  |||||||||||||||    ||||||||||||||||| |   ||||||||    
T  28509340 attttcaactaaaatataatttgttttgttatgaaaattctcctaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 28509241  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  28509240 aggaacaaagggccc 28509226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 32073347 - 32073246
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||| | |||||| | || ||||||  ||||||||||||||||||||||  | |||||||||||||||||||   ||||||||    
T  32073347 attttcaactaaaatataattcgttttgttgcaaagattatcacaatttcttggataataaatatcaccaatatttttaatattagtgagacacattatt 32073248  T
Q  157 ag 158  Q
    ||    
T  32073247 ag 32073246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 2879232 - 2879346
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||| |||||||||  ||||| ||||||| ||| ||| ||| |||||  |||||||||||||||    ||||||||||||||||| |  |||||||||    
T  2879232 attttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaatatcacatatatttttaatattagtaagatacattatt 2879331  T
Q  157 aggagtaaagggccc 171  Q
    || |  |||||||||    
T  2879332 agaaacaaagggccc 2879346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 9381812 - 9381852
Alignment:
Q  14 agaaaaatagcacatgtgaagtagactgaaattttagcacc 54  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  9381812 agaacaatagcacatgcgaagtagactgaaattttagcacc 9381852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 28374580 - 28374662
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatatta 141  Q
    |||||||||||||||| |||||  || ||||  |||||||| ||||||||||| ||||||||||||  | |||||||||||||||    
T  28374580 attttcaactaaaatataatttatttggttat-aaaattattcaaatttcttgaataataaatatc-acaatatttttaatatta 28374662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 18327425 - 18327379
Alignment:
Q  107 ttggataataaatatcgtcgatatttttaatattagtgaagtacatt 153  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||    
T  18327425 ttggataataaatatcttcgttatttataatattagtgaagaacatt 18327379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 34307410 - 34307741
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34307410 agaagtagagaaaaatagcacatgtgaagtagaatgaaattttggcaccctattttcaactaaaatagaatttgctttgttacgaaaattatcccaattt 34307509  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||         |||  ||||||||||||||||||||    
T  34307510 cttgaataataaatatcgtcgatatttttaatattagtgaagcacattattaggagtaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 34307609  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||      
T  34307610 tttgagcatattatcaagaacaaccaattttttttataggagggtgtatatagaaaattttgtgttacatgggatatatatagcaaatctcactaaaaga 34307709  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    ||||||||||||||||||||||||||||||||    
T  34307710 gccaaaaatactaacagatgtcagcccattcc 34307741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 12 - 336
Target Start/End: Original strand, 27430760 - 27431085
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27430760 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatcccaatttcttgga 27430859  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaaggg-cccnnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||         |||  |||||||||||||||||| |||||||    
T  27430860 taataaatatcgtcgatatttttagtattagtgaagtacattattaggagcaaagggtccaaaaaaaaatcaccaatttcttcgataataaacttttgag 27430959  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||||||||||||| |||       |||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||||||| |||||||    
T  27430960 catattatcaagaacaactaaatttttttataggagggtgtatatagaaaattttgtgttacatgggatatatatagtaaatctcactaaaagggccaaa 27431059  T
Q  311 aatactaacagatgtcagcccattcc 336  Q
    ||||||||||||||||||||||||||    
T  27431060 aatactaacagatgtcagcccattcc 27431085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 17967288 - 17967619
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17967288 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatcccaattt 17967387  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||          ||  ||||||||||||||||||||    
T  17967388 cttggataataaatatcgtcgatatttttaatattagtgaagcacattattaggaacaaagggcccaaaaaaatagcaccaatttcttcgataataaatt 17967487  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    ||| |||||||||||||||||||||||        |||||||||||||||||||||| ||||||||  ||| |||||||||||||||||||||||||| |    
T  17967488 ttttagcatattatcaagaacaaccaattttttttataggagggtgtatatagaaatttttgtgttatatgagatatatatagcaaatctcactaaaagg 17967587  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    ||||||||||||||||||||||||||||||||    
T  17967588 gccaaaaatactaacagatgtcagcccattcc 17967619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 21906519 - 21906188
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21906519 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatcccaattt 21906420  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||         |||  ||||||||||||||||||||    
T  21906419 cttggataataaatattgtcgatatttttaatattagtgaagcacattattaggagcaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 21906320  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    || |||||||||||||||||||||||||       ||| |||||||||||||||||  |||||||| ||||||||||||||| ||||||||||||||| |    
T  21906319 ttggagcatattatcaagaacaaccaaattcttttatatgagggtgtatatagaaaattttgtgttacatgggatatatataacaaatctcactaaaagg 21906220  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||| |||||||||||||||||||||||    
T  21906219 gccaaaaagactaacagatgtcagcccattcc 21906188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 6 - 328
Target Start/End: Complemental strand, 5049595 - 5049270
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5049595 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatcccaattt 5049496  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||         |||  ||||||||||||||||||||    
T  5049495 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagcaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 5049396  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgg--gatatatatagcaaatctcactaaaa 302  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||  |||||||| |||||   |||||||||||||||||||||||||    
T  5049395 tttgagcatattatcaagaacaaccaattttttttataggagggtgtatatagaaaattttgtgttacatggaatatatatatagcaaatctcactaaaa 5049296  T
Q  303 aggccaaaaatactaacagatgtcag 328  Q
     ||||||||||| |||||||||||||    
T  5049295 gggccaaaaatattaacagatgtcag 5049270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 22070643 - 22070312
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||  |||||    
T  22070643 agaagtagagaaaaatagcacatgcgaagtagactgaaattctagcaccctattttcaactaaaatagaatttgctctgttatgaaaattatctcaattt 22070544  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||         |||  ||||||||||||||||||||    
T  22070543 tttggataataaatatcgtcgatatttttaatattagtgaagcacattattaggaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 22070444  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    |||||| |||||||||||||||||||||       |||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |    
T  22070443 tttgagtatattatcaagaacaaccaaatttttttataggaggatgtatatagaaatttttgtgttacatggaatatatatagcaaatctcactaaaagg 22070344  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    | ||||||||||||||||||| ||||||||||    
T  22070343 gtcaaaaatactaacagatgttagcccattcc 22070312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 336
Target Start/End: Complemental strand, 48999535 - 48999216
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  48999535 agagaaaagtagcacatgtgaagtagactgaaattttagcactctattttcaactaaaatagaatttgct--gttacgaaaattatcccaatttcttgga 48999438  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||         |||  ||||||||||||||||||||||| ||    
T  48999437 taataaatatcgtcgatatgtttaatattagtgaagcacattattaggagcaaagggcccaaaaaaatatcaccaatttcttcgataataaattttt-ag 48999339  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    ||||||||||||||||||||||       ||||||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  48999338 catattatcaagaacaaccaaa-ttttttataggagggtgtatatagaa--aattgtgttacatgggatatatatagcaaatctcactaaaagggccaaa 48999242  T
Q  311 aatactaacagatgtcagcccattcc 336  Q
    ||||||||||||||||||||||||||    
T  48999241 aatactaacagatgtcagcccattcc 48999216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 48596316 - 48596640
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  48596316 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcacactattttcaactaaaatagaatttgctttgttatgaaaattatcctaattt 48596415  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||         ||| |||||||||||||||||||||    
T  48596416 cttggataataaatatcgtcgatatttttaatattaatgaagcacattattaggaacaaagggcccaaaaaaatatcacaaatttcttcgataataaatt 48596515  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    |||||||||||||||||||||     ||       |||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||||||||| |    
T  48596516 tttgagcatattatcaagaac-----aaattttttataggagggtg--tatagaaatatttgtgttacatgggatatatataacaaatctcactaaaagg 48596608  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
     |||||||||||||||||| ||||||||||||    
T  48596609 accaaaaatactaacagatatcagcccattcc 48596640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 16 - 334
Target Start/End: Complemental strand, 25095295 - 25094976
Alignment:
Q  16 aaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataat 115  Q
    |||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  25095295 aaaaatagcacatgcgaagtagactgaaattttaacacctcattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataat 25095196  T
Q  116 aaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcata 214  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  |||||||||         |||  |||||||||||| ||||||||| |||||||    
T  25095195 aaataccgtcaatatttttaatattagtgaagcacattattaggaacaaagggcccaaaaaaatatcaccaatttcttcgatgataaattttcgagcata 25095096  T
Q  215 ttatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaata 314  Q
    |||| |||| |||||||        ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |    
T  25095095 ttattaagatcaaccaattttttttataggagggtgtatatataaatatttgtgctgcatgggatatatatagcaaatctctctaaaaaggccaaaaaca 25094996  T
Q  315 ctaacagatgtcagcccatt 334  Q
     |||||||| ||||||||||    
T  25094995 ttaacagatttcagcccatt 25094976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 334
Target Start/End: Original strand, 23664082 - 23664395
Alignment:
Q  16 aaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataat 115  Q
    |||||||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  23664082 aaaaatagcacatgcgaagtagactgaaattttcacaccccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttggataat 23664181  T
Q  116 aaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcata 214  Q
    |||||| ||| | ||||||||||||||||||  ||||||||||||  |||||||||         |||| ||||||||         ||||| |||||||    
T  23664182 aaatatggtcaacatttttaatattagtgaaacacattattaggaacaaagggcccaaaaaaatatcatcaatttctt---------attttcgagcata 23664272  T
Q  215 ttatcaagaacaaccaa---annnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaa 311  Q
    |||| |||| |||||||           |||||| |||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  23664273 ttattaagatcaaccaatttttttttttataggaaggtgtatatagaaatatttgtgctgcatgggatatatataacaaatctctctaaaaatgccaaaa 23664372  T
Q  312 atactaacagatgtcagcccatt 334  Q
    | | |||||||| ||||||||||    
T  23664373 acattaacagatttcagcccatt 23664395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 57 - 292
Target Start/End: Complemental strand, 9023302 - 9023068
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||||||||||||||||| |||||||  |||| ||||| ||||  |||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  9023302 attttcaactaaaatagaatttgttttgttattaaaactatcccaattatttggataataaatatcatcgatatttttaatattagtgaggcacattatt 9023203  T
Q  157 aggagtaaagggcccnnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatata 256  Q
    | || ||||| | ||        |||| |||||||||||||||||||||||| ||| ||||| |||||||||||||       ||||| ||||||||||     
T  9023202 atgaataaagcgtccaaaaaatatcatcaatttcttcgataataaatttttgcgcacattattaagaacaaccaaaaaaaattatagg-gggtgtatatt 9023104  T
Q  257 gaaatatttgtgttgcatgggatatatatagcaaat 292  Q
    ||||| |||||| | |||||| ||||||||||||||    
T  9023103 gaaatttttgtgctacatggggtatatatagcaaat 9023068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 26465217 - 26465140
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgcttt 83  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26465217 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgcttt 26465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 49229352 - 49229452
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||  ||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  49229352 attttcaactaaaatataatttattttgttatgaaaattatcccaatttcttggataataaatatcatcaatatttttaatattagtgaaacacattatt 49229451  T
Q  157 a 157  Q
    |    
T  49229452 a 49229452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 47397574 - 47397645
Alignment:
Q  89 gaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattagga 160  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  47397574 gaaaattatccgaatttcttggataataaatatcatcgatatttttaatattagtgatgcacattattagga 47397645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 5509870 - 5509955
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattag 142  Q
    ||||||| ||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||||| | | ||||||||||||||||    
T  5509870 attttcatctaaaatagaatttattttgttatgaaaattatcccaatttcttggataataaatatggccaatatttttaatattag 5509955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 12027876 - 12027763
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||  |||||| ||||||| |||||| ||| |||||| || || ||||||||||  | ||||||||||||||||||||| ||||||||    
T  12027876 attttcaactaaaatctaatttgttttgttatgaaaatcatcaaaatttattcgaaaataaatatcaccaatatttttaatattagtgaagcacattatt 12027777  T
Q  157 aggagtaaagggcc 170  Q
    ||||  ||||||||    
T  12027776 aggaacaaagggcc 12027763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 160
Target Start/End: Original strand, 5209694 - 5209798
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattat 155  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||| ||||| ||||||||||||||||  | |||| ||||||| |||||||| | |||||    
T  5209694 tattttcaactaaaatataatttgttttgttatgaaaattatcccaatttattggataataaatatcaccaatatgtttaatagtagtgaagaaaattat 5209793  T
Q  156 tagga 160  Q
     ||||    
T  5209794 cagga 5209798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 161
Target Start/End: Original strand, 24185680 - 24185783
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| |||||||  |||||||||| ||||||||||| ||||||||||  | |||||||||||| ||||||   ||||||||    
T  24185680 attttcaactaaaatataatttgttttgttat-aaaattatcccaatttcttggacaataaatatcaccaatatttttaataatagtgagacacattatt 24185778  T
Q  157 aggag 161  Q
    |||||    
T  24185779 aggag 24185783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 36296782 - 36296668
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| || |||| ||||||| ||| ||||| ||||||||||||||||    ||||||||||||||||| |   ||||||||    
T  36296782 attttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatcacatatatttttaatattagtaagacacattatt 36296683  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  36296682 aggaacaaagggccc 36296668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 26221764 - 26221650
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||| |||||||||  ||||| ||||||| ||| ||| ||| ||||| ||||||||||||||||    ||||||||||||||||| |  |||||||||    
T  26221764 attttctactaaaatattatttgttttgttatgaagattctcccaattttttggataataaatatcacatatatttttaatattagtaagatacattatt 26221665  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  26221664 aggaacaaagggccc 26221650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 28945834 - 28945948
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| || |||| ||| |||||  |||||||||||||||    ||||||||||||||||| |   ||||||||    
T  28945834 attttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 28945933  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  28945934 aggaacaaagggccc 28945948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 42722317 - 42722203
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| || |||| ||||||| ||| ||||| ||||||||||||||||     |||||||||||||||| |   ||||||||    
T  42722317 attttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatcacatgtatttttaatattagtaagacacattatt 42722218  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  42722217 aggaacaaagggccc 42722203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 17385406 - 17385494
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtga 145  Q
    |||||||||| ||||||||||||| ||||||| ||||||| ||  |||||| | |||||||||||||   ||||||||||||||||||||    
T  17385406 tattttcaacaaaaatagaatttgttttgttatgaaaattgtctcaatttc-tagataataaatatcactgatatttttaatattagtga 17385494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 48646232 - 48646143
Alignment:
Q  68 aaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatta 157  Q
    ||||| |||||| ||||||  ||||||||||| ||||| ||||||||||||||||  | ||||||||||||| ||||| | |||||||||    
T  48646232 aaatataatttgttttgttttgaaaattatcccaatttattggataataaatatcaccaatatttttaatatcagtgaggcacattatta 48646143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 41665691 - 41665592
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| ||||| |||||||| |||| || | | |||||||| ||||||||||||| || || |||||| ||||||||| | ||||||||    
T  41665691 attttcaactaaaatataatttactttgttaggaaagtttttccaatttcttagataataaatatcatcaat-tttttagtattagtgaggcacattatt 41665593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 44310518 - 44310372
Alignment:
Q  83 tgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc--nnnnnnnnt 180  Q
    ||||| ||||||||||  |||||| |||||||| ||||||  | ||||||| ||||||||||| | ||||||||||||  ||| |||||          |    
T  44310518 tgttatgaaaattatctcaatttcatggataattaatatcaccaatattttcaatattagtgaggcacattattaggaacaaacggcccaaaaaaaatat 44310419  T
Q  181 cataaatttcttcgataataaatttttgagcatattatcaagaacaa 227  Q
    ||  |||||||| ||||||||||||||||||| ||||| ||||||||    
T  44310418 cactaatttcttagataataaatttttgagcacattattaagaacaa 44310372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 44310788 - 44310737
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcacccta 57  Q
    ||||| |||||| |||||||||||  ||||| ||||||||||||||||||||    
T  44310788 agaagtagagaacaatagcacatgcaaagtatactgaaattttagcacccta 44310737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 12028252 - 12028222
Alignment:
Q  24 cacatgtgaagtagactgaaattttagcacc 54  Q
    |||||||||||||||||||||||||||||||    
T  12028252 cacatgtgaagtagactgaaattttagcacc 12028222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 47559566 - 47559630
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatc 122  Q
    ||||| |||||||||| |||||| |||||||  |||||||||| ||||| || |||||||||||||    
T  47559566 atttttaactaaaatataatttgttttgttat-aaaattatcccaatttttttgataataaatatc 47559630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 36296608 - 36296540
Alignment:
Q  243 ggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaa 311  Q
    |||||||||||||||||| |||||| |   ||||| ||||||||||||||  ||  |||||||||||||    
T  36296608 ggagggtgtatatagaaagatttgtttcatatggggtatatatagcaaattgcatcaaaaaggccaaaa 36296540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 221; Significance: 1e-121; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 22012080 - 22012409
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||    
T  22012080 agaagtagagaaaaatagcatatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatctcaattt 22012179  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnntcataaatttcttcgataataaattt 205  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||  |||||||||        |||  |||||||||||||||||||||    
T  22012180 cttggataataaatatcgtcgatatttttaatattaatgaagcacataattaggaacaaagggccc-aaaaaaatcaccaatttcttcgataataaattt 22012278  T
Q  206 ttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaagg 305  Q
    |||||||||||||||||||||||||||       | |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  22012279 ttgagcatattatcaagaacaaccaaatttttttacaggagggtgtatatagaaatttttgtgttacatgggatatatatagcaaatctcactaaaaagg 22012378  T
Q  306 ccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||||||||||||||||||||||||||    
T  22012379 ccaaaaatactaacagatgtcagcccattcc 22012409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 1603509 - 1603179
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||  ||||    
T  1603509 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccatattttcaactaaa-tagaatttgctttgttatgaaaattatcctcattt 1603411  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||         |||  ||||||||||||||||||||    
T  1603410 cttggataataaatatcgtcgatatttttaatattaatgaagcacattattaggaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 1603311  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    ||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |    
T  1603310 tttaagcatattatcaagaacaaccaaatttttttataggagggtgtatatagaaatatttgtgttacatgggatatatatagaaaatctcactaaaagg 1603211  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    ||||||||||||||||||||||||||||||||    
T  1603210 gccaaaaatactaacagatgtcagcccattcc 1603179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 6 - 334
Target Start/End: Complemental strand, 34043684 - 34043349
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||    
T  34043684 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatccccattt 34043585  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||         |||  ||||||||||||||||||||    
T  34043584 cttggataataaatatcgtcgatatttttaatattaatgaagaacattattaggaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 34043485  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatggg------atatatatagcaaatctcact 298  Q
    ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||      |||||||||||||||||||||    
T  34043484 tttgagcatattatcaagaacaaccaaaaaaatttataggagggtgtatatagaaatatttgtgttacatgggatatatatatatatagcaaatctcact 34043385  T
Q  299 aaaaaggccaaaaatactaacagatgtcagcccatt 334  Q
    |||| ||| |||||||||||||||||||| ||||||    
T  34043384 aaaatggctaaaaatactaacagatgtcaacccatt 34043349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 12 - 336
Target Start/End: Complemental strand, 1423089 - 1422764
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    ||||||||||| |||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  1423089 agagaaaaataacacatgagaactagactgaaattttagtacccaattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttgga 1422990  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    ||||||||||| || ||||||||||||||||||||  || |||| ||||  |||||||||         |||  |||||||||||||||||||||| |||    
T  1422989 taataaatatcatcaatatttttaatattagtgaaacacgttatcaggaacaaagggcccaaaaaaatatcaccaatttcttcgataataaattttcgag 1422890  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| |||||||||||||       |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||    
T  1422889 catattattaagaacaaccaaaaaaatttataggagggtgtatatagaaagttttgtgctgcatgggatatatatagcaaatctcactaaaaaggccaaa 1422790  T
Q  311 aatactaacagatgtcagcccattcc 336  Q
    || | |||||||| |||||| |||||    
T  1422789 aacattaacagatttcagccaattcc 1422764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 1131914 - 1131582
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||| |||||||||||||| |||||||||| |  || ||||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  1131914 agaagtagagaaaaatagtacatgtgaagtagattgaaattttaacggcccattttcaactaaaatagaatttgctttattatgaaaattatcccaattt 1131815  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc--nnnnnnnntcataaatttcttcgataataaat 203  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||  |||||||||          |||  |||||||||||||||||||    
T  1131814 cttggataataaatatcgtcgatatttttaatattagtgaagcacattatcaagaaaaaagggccccaaaaaaatatcaccaatttcttcgataataaat 1131715  T
Q  204 ttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaa 303  Q
    ||| ||||||||||| ||||||||||||        |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||     
T  1131714 tttcgagcatattattaagaacaaccaattttttttataggagggtgtatatagaaatttttgtgctgcatgggatatatatagcaaatctctctaaaag 1131615  T
Q  304 ggccaaaaatactaacagatgtcagcccattcc 336  Q
    || |||||| | |||||||  ||||||||||||    
T  1131614 ggtcaaaaacattaacagaattcagcccattcc 1131582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 12 - 336
Target Start/End: Complemental strand, 18675487 - 18675162
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  18675487 agagaaaaataacacatgcgaagtagactgaaattttagcaccccatttttaactaaaatagaatttgctttgttatgaaaattatcctaatttcttgga 18675388  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||||| | ||||||||||||||||||||  || |||||||||  |||||||||         |||  |||||||||||  ||||||||| |||    
T  18675387 taataaatatcgacaatatttttaatattagtgaaacacgttattaggaacaaagggcccaaaaaaatatcaccaatttcttcgacgataaattttcgag 18675288  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| |||||||||||||       | |||||| ||||||||||||| |||||  ||||| ||||||||||||||||||||||||||| |||||||    
T  18675287 catattattaagaacaaccaaattgttttacaggaggatgtatatagaaatttttgtactgcataggatatatatagcaaatctcactaaaagggccaaa 18675188  T
Q  311 aatactaacagatgtcagcccattcc 336  Q
    || | |||||||| |||||| |||||    
T  18675187 aacattaacagatttcagccaattcc 18675162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 301
Target Start/End: Complemental strand, 20990573 - 20990281
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaa--tttgctttgttacgaaaattatccaaatttcttg 109  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| | ||  |||||| ||  |||||||||| | ||||||||||  |||||||||    
T  20990573 agagaaaaatagcacatgcgaagtagactgaaattttagcaccccattataaaaaaaaataaaaaatttgctttgtaatgaaaattatctcaatttcttg 20990474  T
Q  110 gataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttg 208  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||         |||  ||||||||||||||||||||||      
T  20990473 gataataaatatcgtcgatatttttaatattagtgaagcacattattaagaacaaagggcccaataaaatatcactaatttcttcgataataaattttca 20990374  T
Q  209 agcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaa 301  Q
    |||||||||| ||||||||||||        |||||| ||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||    
T  20990373 agcatattattaagaacaaccaattttttttataggatggtgtatatagaaatttttgtgctgcatggaatatatatagcgaatctcactaaa 20990281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 21442777 - 21442654
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  21442777 agaagtagaaaaaaatagcacatgtgaagtagactagaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatcccaattt 21442678  T
Q  106 cttggataataaatatcgtcgata 129  Q
    ||||||||||||||||||||||||    
T  21442677 cttggataataaatatcgtcgata 21442654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 21442652 - 21442560
Alignment:
Q  244 gagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatactaacagatgtcagcccattcc 336  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21442652 gagggtgtatatagaaatatttgtgttacatgggatatatatagcaaatctcactaaaagggccaaaaatactaacagatgtcagcccattcc 21442560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 89 - 329
Target Start/End: Original strand, 26212910 - 26213150
Alignment:
Q  89 gaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagt-aaagggcccnnnnnnnntcataaat 187  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| | | ||||||| || | ||||||||         |||| |||    
T  26212910 gaaaattatcctgatttcttggataataaatatcatcgatatttttaatattagtgaggcatattattaagaataaaagggccaaaaatttatcatcaat 26213009  T
Q  188 ttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatag 287  Q
    ||||||||||||||| ||||||||||||||||||||| | || ||       |||| |||||||||||||||||||||||  | ||||||||||||||||    
T  26213010 ttcttcgataataaaattttgagcatattatcaagaatagcc-aatttttttatagtagggtgtatatagaaatatttgtactacatgggatatatatag 26213108  T
Q  288 caaatctcactaaaaaggccaaaaatactaacagatgtcagc 329  Q
    |||||| | | | |  ||||||||||| |||||||| |||||    
T  26213109 caaatcgcgccagacgggccaaaaatattaacagatttcagc 26213150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 56 - 312
Target Start/End: Complemental strand, 15060256 - 15060002
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattat 155  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||  |||||||||||||||||||||| |||||||||||||||| |||||   |||||||    
T  15060256 tatttttaactaaaatagaatttgttttgttatgaaaattatctcaatttcttggataataaatatcatcgatatttttaatatcagtgagacacattat 15060157  T
Q  156 taggagtaaagggcccnnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatat 255  Q
    || ||  |||| ||||        |||  ||| ||||||  ||||||| |||||||| ||||| |||||||||||||       ||||||||||||||||    
T  15060156 tatgaacaaagtgcccaaaaaatatcaccaatgtcttcgtcaataaatatttgagcacattattaagaacaaccaaa-ttttttataggagggtgtatat 15060058  T
Q  256 agaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaa 312  Q
    |||||| || ||| | ||| || |||||||||| |||| | | |||| |||||||||    
T  15060057 agaaat-ttcgtgctacattgggtatatatagcgaatcacgccaaaagggccaaaaa 15060002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 54 - 332
Target Start/End: Complemental strand, 26817448 - 26817175
Alignment:
Q  54 cctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacatt 153  Q
    ||||||||||||||||||||||||||  |||||| ||||| ||||| |||||||||||||||||||||| ||||||||| |||||||||| | | |||||    
T  26817448 cctattttcaactaaaatagaatttg--ttgttatgaaaaatatcccaatttcttggataataaatatcatcgatatttgtaatattagttaggcacatt 26817351  T
Q  154 attaggagtaaaggg-cccnnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgta 252  Q
    ||||| |  ||||||  |         |||| ||||||||||||||||||||||||||||  |||| |||||    |||         ||| ||||||||    
T  26817350 attagaaacaaagggtacaaaaaaatatcatcaatttcttcgataataaatttttgagcaccttattaagaa----caattttttttttagaagggtgta 26817255  T
Q  253 tatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatactaacagatgtcagccca 332  Q
    |||||||||||||||| | ||| || ||||||||| ||||| |  ||||| ||||||||| | |||||||| ||||||||    
T  26817254 tatagaaatatttgtgctacattgggtatatatagaaaatcacgttaaaatggccaaaaacattaacagatttcagccca 26817175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 11680872 - 11680986
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||||| | ||||| ||||||||||||||||  | ||||||||||||||||||||| ||||||||    
T  11680872 attttcaactaaaatataatttgttttgttatgaaaattattccaatttattggataataaatatcaccaatatttttaatattagtgaagcacattatt 11680971  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  11680972 aggaaaaaagggccc 11680986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 31129833 - 31129720
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||  |||| | ||||||| ||||||||||| |||||||| ||||||||||||| || |||||||||||| |||||| | ||||||||    
T  31129833 attttcaactaaaatgtaatt-gttttgttatgaaaattatcccaatttctttgataataaatatcatcaatatttttaatactagtgaggcacattatt 31129735  T
Q  157 aggagtaaagggccc 171  Q
    | ||  |||||||||    
T  31129734 aagaacaaagggccc 31129720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 3229212 - 3229314
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||  | | |||||| ||||||| |||||||||||| |||||||||||||||||||||  | ||||||||||| |||||| || ||||||||    
T  3229212 attttcaactaggaaataatttgttttgttatgaaaattatccacatttcttggataataaatatcaccaatatttttaattttagtg-aggacattatt 3229310  T
Q  157 agga 160  Q
    ||||    
T  3229311 agga 3229314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 19108025 - 19107911
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |  ||  ||||||  ||||||||||| ||||| ||||||||||||||||  | ||||||||||||||||||| | |||||||     
T  19108025 attttcaactaaaatatatatttttttgttttgaaaattatcccaattttttggataataaatatcaccaatatttttaatattagtgaggaacattatc 19107926  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  19107925 aggaacaaagggccc 19107911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 230
Target Start/End: Original strand, 13758826 - 13758966
Alignment:
Q  91 aaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnn-tcataaattt 189  Q
    ||||||||| ||||| ||| || |||||||||||||||||||| ||||||||||  | |||| |||| ||  ||||| |||         |||  |||||    
T  13758826 aaattatcccaattttttgaattataaatatcgtcgatattttaaatattagtggggcacataattatgaacaaaggacccaaaaaaatatcaccaattt 13758925  T
Q  190 cttcgataataaatttttgagcatattatcaagaacaacca 230  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  13758926 cttcgataataaatttttgagcatattattaagaacaacca 13758966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 33516641 - 33516727
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagt 143  Q
    |||||||||||||||| |||||| ||||||| ||||||| ||| |||||  |||||||||||||||    |||||||||||||||||    
T  33516641 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatattagt 33516727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 4065602 - 4065702
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||||||||||  ||||| ||||||| ||| | | | | ||||||||||||||||||||||  | |||||||||  |||||||||| | ||||||    
T  4065602 attttcaactaaaatatcatttgttttgttatgaagagtcttccaatttcttggataataaatatcaccaatatttttataattagtgaagcaaattatt 4065701  T
Q  157 a 157  Q
    |    
T  4065702 a 4065702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 13758549 - 13758596
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcac 53  Q
    ||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  13758549 agaagtagagaacaatagcacatgtgaagtagactaaaattttagcac 13758596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 4090808 - 4090885
Alignment:
Q  58 ttttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatattttta 135  Q
    |||||||||||||||   |||| ||||||| ||| ||| ||  |||||||||||||||||||||  || |||||||||    
T  4090808 ttttcaactaaaatatcgtttgttttgttatgaagattctcgcaatttcttggataataaatattatcaatattttta 4090885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 22524791 - 22524750
Alignment:
Q  81 tttgttacgaaaattatccaaatttcttggataataaatatc 122  Q
    ||||||| |||||| |||| ||||||||||||||||||||||    
T  22524791 tttgttatgaaaatcatcccaatttcttggataataaatatc 22524750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 26817759 - 26817710
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccc 55  Q
    ||||| |||||| ||||||||||| |||||||| ||||||||||| ||||    
T  26817759 agaagtagagaacaatagcacatgcgaagtagagtgaaattttagtaccc 26817710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 4091022 - 4091054
Alignment:
Q  279 tatatatagcaaatctcactaaaaaggccaaaa 311  Q
    ||||||||||||||| |||||||||||||||||    
T  4091022 tatatatagcaaatcacactaaaaaggccaaaa 4091054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 221; Significance: 1e-121; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 44314007 - 44314336
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||    
T  44314007 agaagtagagaaaaatagcaaatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatctcaattt 44314106  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnntcataaatttcttcgataataaattt 205  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||  |||||||||        |||  |||||||||||||||||||||    
T  44314107 cttggataataaatatcgtcgatatttttaatattaatgaagcacataattaggaacaaagggccc-aaaaaaatcaccaatttcttcgataataaattt 44314205  T
Q  206 ttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaagg 305  Q
    |||||||||||||||||||||||||||       | |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  44314206 ttgagcatattatcaagaacaaccaaatttttttacaggagggtgtatatagaaatttttgtgttacatgggatatatatagcaaatctcactaaaaagg 44314305  T
Q  306 ccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||||||||||||||||||||||||||    
T  44314306 ccaaaaatactaacagatgtcagcccattcc 44314336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 44322186 - 44322515
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||    
T  44322186 agaagtagagaaaaatagcatatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatctcaattt 44322285  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnntcataaatttcttcgataataaattt 205  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||  |||||||||        |||  |||||||||||||||||||||    
T  44322286 cttggataataaatatcgtcgatatttttaatattaatgaagcacataattaggaacaaagggccc-aaaaaaatcaccaatttcttcgataataaattt 44322384  T
Q  206 ttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaagg 305  Q
    |||||||||||||||||||||||||||       | |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  44322385 ttgagcatattatcaagaacaaccaaatttttttacaggagggtgtatatagaaatttttgtgttacatgggatatatatagcaaatctcactaaaaagg 44322484  T
Q  306 ccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||||||||||||||||||||||||||    
T  44322485 ccaaaaatactaacagatgtcagcccattcc 44322515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 6 - 334
Target Start/End: Original strand, 33015157 - 33015486
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||    
T  33015157 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatccccattt 33015256  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
     ||||||||||||||||||||||||||||||||||| ||||| || ||||||| |  |||||||||         |||  ||||||||||||||||||||    
T  33015257 attggataataaatatcgtcgatatttttaatattaatgaagcactttattagaaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 33015356  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    ||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |    
T  33015357 tttgagcatattatcaagaacaagcaaatttttttataggagggtgtatatagaaatatttgtgttacatgggatatatataacaaatctcactaaaagg 33015456  T
Q  305 gccaaaaatactaacagatgtcagcccatt 334  Q
    ||||||||||||||||||||||||||||||    
T  33015457 gccaaaaatactaacagatgtcagcccatt 33015486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 6221526 - 6221194
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||  ||||    
T  6221526 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctatttttaactaaaatagaatttactttgttatgaaaattatcctcattt 6221427  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcc-cnnnnnnnntcataaatttcttcgataataaatt 204  Q
    ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||  ||| ||||          |||  ||||||||||||||||||||    
T  6221426 cttggataataaatatcgtagatatttttaatattaatgaagcacattattaggaacaaaaggcctaaaaaaatatcaccaatttcttcgataataaatt 6221327  T
Q  205 tttgagcatattatcaagaacaaccaaa-nnnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaa 303  Q
    ||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||     
T  6221326 tttgagcatattatcaagaacaaccaaattttttttataggagggtgtatatagaaatatttgtgttacatgggatatatatagaaaatctcactaaaag 6221227  T
Q  304 ggccaaaaatactaacagatgtcagcccattcc 336  Q
    | |||||||||||||||||||||||||||||||    
T  6221226 gcccaaaaatactaacagatgtcagcccattcc 6221194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 336
Target Start/End: Complemental strand, 19685925 - 19685605
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  19685925 agagaaaagtagcacatgtgaagtagactgaaattttagcactctattttcaactaaaatagaatttgct--gttacgaaaattatcccaatttcttgga 19685828  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||         |||  ||||||||||||||||||||||| ||    
T  19685827 taataaatatcgtcgatatgtttaatattagtgaagcacattattaggagcaaagggcccaaaaaaatatcaccaatttcttcgataataaattttttag 19685728  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    ||||||||||||||||||||||       ||||||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  19685727 catattatcaagaacaaccaaa-ttttttataggagggtgtatatagaa--aattgtgttacatgggatatatatagcaaatctcactaaaagggcaaaa 19685631  T
Q  311 aatactaacagatgtcagcccattcc 336  Q
    |||||||||| |||||||||||||||    
T  19685630 aatactaacaaatgtcagcccattcc 19685605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 12 - 334
Target Start/End: Complemental strand, 2554190 - 2553868
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||||||||||  |||||||||||    
T  2554190 agagaaaaatagcacatgtgaagtagactgaaattttagcaccccattttcaaataaaatagaatttgctttgtaatgaaaattatctcaatttcttgga 2554091  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||         |||  ||||||||||||||||||||||  ||    
T  2554090 taataaatatcgtcgatatttttaatattagtgaagcacattattaagaacaaagggcccaaaaaaatatcactaatttcttcgataataaattttcaag 2553991  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
     ||||||| ||||||||||||        |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| |||||| ||||    
T  2553990 tatattattaagaacaaccaattttttttataggagggtgtatatagaaatttttgtgctgcatgggatatatatagcgaatctcact-aaaagggcaaa 2553892  T
Q  311 aatactaacagatgtcagcccatt 334  Q
    || | ||| |||| ||||||||||    
T  2553891 aacattaatagatttcagcccatt 2553868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 12 - 334
Target Start/End: Original strand, 22575954 - 22576276
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||   ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  22575954 agagaaaaatagcacattcaaagtaaactaaaattttagcaccccattttcaactaaaatagaatttgctttgttatgaaaattatcccaattttttgga 22576053  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||||||||||||||||||||||||||| | | ||||||||||  |||||||||         |||| ||||||||||||||||||||||||||    
T  22576054 taataaatatcgtcgatatttttaatattagtgaggcaaattattaggaacaaagggcccaaaaaaatatcattaatttcttcgataataaatttttgag 22576153  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| |||||||||||||       ||||||||||||||||||||||||||||    |||||||||||||||| |||||||||| || ||||||||    
T  22576154 catattattaagaacaaccaaaaataattataggagggtgtatatagaaatatttgtaccacatgggatatatatagtaaatctcact-aagaggccaaa 22576252  T
Q  311 aatactaacagatgtcagcccatt 334  Q
     | | |||||||| ||||||||||    
T  22576253 cacattaacagatttcagcccatt 22576276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 12 - 334
Target Start/End: Original strand, 41825934 - 41826256
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||| ||||| | ||||||||||  |||||||||||    
T  41825934 agagaaaaatagcacatgtgaagtagaccgaaattttagcaccccattttcaaataaaatagaatttgttttgtaatgaaaattatctcaatttcttgga 41826033  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||         |||  ||||||||||||||||||||||  ||    
T  41826034 taataaatatcgtcgatatttttaatattagtgaagcacattattaagaacaaagggcccaaaaaaatatcactaatttcttcgataataaattttcaag 41826133  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| ||||||||||||        |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| |||||| ||||    
T  41826134 catattattaagaacaaccaattttttttataggagggtgtatatagaaatttttgtgctgcatgggatatatatagcgaatctcact-aaaagggcaaa 41826232  T
Q  311 aatactaacagatgtcagcccatt 334  Q
    || | ||| |||| ||||||||||    
T  41826233 aacattaatagatttcagcccatt 41826256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 6 - 312
Target Start/End: Original strand, 27861785 - 27862074
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||    
T  27861785 agaagtagagaaaaatagcacatgcgaagtagactgaaattttagcaccccattttcaactaaaatagaatttgctttgttatgaaaattattccaattt 27861884  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnntcataaatttcttcgataataaattt 205  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||        |||  |||||||||||||||||||||    
T  27861885 cttggataataaatattgtcgatatttttaatattagtgaagtacattattaggaacaaagggcccaaaaaatatcaccaatttcttcgataataaattt 27861984  T
Q  206 ttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaagg 305  Q
    ||||                |||||||       |||||||||||||||||||||| |||||| |||||||||||||||||| ||||| |||||||| ||    
T  27861985 ttga----------------aaccaaattattttataggagggtgtatatagaaat-tttgtgctgcatgggatatatatagaaaatcgcactaaaaggg 27862067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 57 - 330
Target Start/End: Original strand, 11199300 - 11199573
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||||||||||||||||| |||| |  |||||| |||  ||||||||| |||||||||||| |||||||||||||||||| ||| | ||||||||    
T  11199300 attttcaactaaaatagaatttgttttgctttgaaaatcatctcaatttcttgcataataaatatcatcgatatttttaatattaatgaggcacattatt 11199399  T
Q  157 aggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatat 255  Q
    ||||  ||| |||||         |||  ||||||||||||||||||||||| |||||||||| |||||||| ||||       | ||||| ||||||||    
T  11199400 aggaacaaaaggcccaaaaaaatatcactaatttcttcgataataaattttttagcatattattaagaacaa-caaaaaaaaatagaggagagtgtatat 11199498  T
Q  256 agaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatactaacagatgtcagcc 330  Q
    |||||||||| || | |||| | ||||||||| |||||||  ||||| ||||||||| | |||||||| ||||||    
T  11199499 agaaatatttatgctacatgtggtatatatagaaaatctcgttaaaagggccaaaaacaataacagatttcagcc 11199573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 33054863 - 33054748
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattat 155  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||  ||||| ||||||||||||||||  | ||||||||||||||||||||| |||||||    
T  33054863 tattttcaactaaaatataatttgttttgttatgaaaattatcataatttattggataataaatatcaccaatatttttaatattagtgaagcacattat 33054764  T
Q  156 taggagtaaagggccc 171  Q
    |||||  |||||||||    
T  33054763 taggaacaaagggccc 33054748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 55 - 231
Target Start/End: Complemental strand, 14904115 - 14903938
Alignment:
Q  55 ctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacatta 154  Q
    |||||||||||||||||| |||||| ||||| | ||||||||||| ||||  ||||||||||||||||    ||||||||||||||||||||| ||||||    
T  14904115 ctattttcaactaaaatataatttgttttgtcatgaaaattatcctaattcattggataataaatatcacgaatatttttaatattagtgaagcacatta 14904016  T
Q  155 ttaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaa 231  Q
    |||||| ||| ||||||         ||| |||||||||||||||||| |||||  ||| ||||| ||||||||||||    
T  14904015 ttaggaataatgggcccaaaaaaatatcacaaatttcttcgataataatttttttggcacattattaagaacaaccaa 14903938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 38566216 - 38566317
Alignment:
Q  59 tttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattag 158  Q
    |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||  | ||||||||||||||||||| | ||||||||||    
T  38566216 tttcaactaaaatataatttgttttgttatgaaaattatcccaatttcttggataataaatatcaccaatatttttaatattagtgacgcacattattag 38566315  T
Q  159 ga 160  Q
    ||    
T  38566316 ga 38566317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 19091198 - 19091374
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||||| |||||||||| |||||||||||||  | ||||||||||||||| ||| | ||||||||    
T  19091198 attttcaactaaaatataatttgttttgttatgaaaattatacaaatttcttagataataaatatcaccaatatttttaatattattgaggcacattatt 19091297  T
Q  157 aggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaa 232  Q
    ||||  |||||||||         |||| ||||| |||||||||||||||||   || ||||| |||||||||||||    
T  19091298 aggaacaaagggcccaaaaaaatatcatcaattttttcgataataaattttttgacacattattaagaacaaccaaa 19091374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 41302463 - 41302629
Alignment:
Q  58 ttttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatta 157  Q
    |||| |||||||||| |||||| ||||||| ||||||||||| ||||| ||||||||||||||||  | |||||| |||||||||||| | |||||||||    
T  41302463 ttttgaactaaaatataatttgttttgttatgaaaattatcccaattttttggataataaatatcaacaatatttgtaatattagtgaggcacattatta 41302562  T
Q  158 ggagtaaagggcccnnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaa 224  Q
     ||  |||||||||        ||  ||||||||||||||||||||||||  ||| ||||| |||||    
T  41302563 cgaacaaagggccctaaaaatatcgcaaatttcttcgataataaattttttggcacattataaagaa 41302629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 30386942 - 30386840
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||| |||||||||| |||||| |||||||  |||||||||| ||||||||||||||||||||||  |||||||||||||||||||||   ||||||||    
T  30386942 atttttaactaaaatataatttgttttgttat-aaaattatcctaatttcttggataataaatatcaccgatatttttaatattagtgagacacattatt 30386844  T
Q  157 agga 160  Q
    ||||    
T  30386843 agga 30386840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 10022997 - 10022896
Alignment:
Q  59 tttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattag 158  Q
    |||||||||||||| | |||| ||||||| ||||||||||  ||||||||||||||||||||||  | |||||||| |||||||||| | ||||||||||    
T  10022997 tttcaactaaaatatattttgttttgttatgaaaattatctcaatttcttggataataaatatccccaatattttttatattagtgaggcacattattag 10022898  T
Q  159 ga 160  Q
    ||    
T  10022897 ga 10022896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 13597890 - 13598003
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| |||||||  |||||||||| | |||||||||||||||||||   | |||||||||||||||| || | ||||||||    
T  13597890 attttcaactaaaatataatttgttttgttat-aaaattatcccattttcttggataataaatatgaccaatatttttaatattagcgaggcacattatt 13597988  T
Q  157 aggagtaaagggccc 171  Q
    | ||||||| |||||    
T  13597989 aagagtaaaaggccc 13598003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 38422951 - 38423065
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||||||||||  ||||| ||||||| ||| ||| ||  |||||||||||||||||||||| || |||||||||  |||||||| | ||||||||    
T  38422951 attttcaactaaaatatcatttgttttgttatgaagattctctcaatttcttggataataaatatcatcaatatttttataattagtgaggcacattatt 38423050  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  38423051 aggaacaaagggccc 38423065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 41422922 - 41423004
Alignment:
Q  89 gaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc 171  Q
    ||||||||||| | ||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||||  |||||||||    
T  41422922 gaaaattatcccagtttcttggataataaatatcaccaatatttttaatattagtgaagcacattattaggaacaaagggccc 41423004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 45277504 - 45277620
Alignment:
Q  55 ctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacatta 154  Q
    |||||||||||||||||| |||||| ||||||| ||||||| ||| |||||  |||||||||||||||    ||||||||||||||||| |   ||||||    
T  45277504 ctattttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacatta 45277603  T
Q  155 ttaggagtaaagggccc 171  Q
    ||||||  |||||||||    
T  45277604 ttaggaacaaagggccc 45277620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 24484565 - 24484462
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| | |||||||   ||||||||||||||||||||||    ||||||||||||||||| | | ||||||||    
T  24484565 attttcaactaaaatataatttgttttgttatgtaaattatttcaatttcttggataataaatatcacaaatatttttaatattagttaggcacattatt 24484466  T
Q  157 agga 160  Q
    ||||    
T  24484465 agga 24484462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 7880374 - 7880488
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||| ||| |||||  |||||||||||||||    ||||||||||||||||| |   ||||||||    
T  7880374 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 7880473  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  7880474 aggaacaaagggccc 7880488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 2565701 - 2565587
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||| |||||||||  ||||| ||||||| ||| ||| ||| |||||  |||||||||||||||    ||||||||||||||||| |  |||||||||    
T  2565701 attttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaatatcacatatatttttaatattagtaagatacattatt 2565602  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  2565601 aggaacaaagggccc 2565587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 19678108 - 19678022
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagt 143  Q
    |||||||||||||||| |||||| ||||||| || |||| ||| |||||  |||||||||||||||    |||||||||||||||||    
T  19678108 attttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcacatatatttttaatattagt 19678022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 29303256 - 29303144
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||   | |||| ||| |||||  |||||||||||||||    ||||||||||||||||| |   ||||||||    
T  29303256 attttcaactaaaatataatttgttttgttcttagaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 29303157  T
Q  157 aggagtaaagggc 169  Q
    |||| ||||||||    
T  29303156 aggaataaagggc 29303144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 43673290 - 43673389
Alignment:
Q  58 ttttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatta 157  Q
    ||||||||| ||||| |||||| ||||||| ||| ||| || | |||||| |||||||||||||| || |||||||||  |||| ||| | |||||||||    
T  43673290 ttttcaactcaaatataatttgttttgttaggaagattctctatatttctcggataataaatatcatcaatatttttataattattgaggcacattatta 43673389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 6883088 - 6882999
Alignment:
Q  58 ttttcaactaaaatagaatttgcttt--gttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtga 145  Q
    ||||||||||||||| |||||  |||  |||| ||||||||||  ||||||||||||||||| ||||  | |||||||||||||| ||||    
T  6883088 ttttcaactaaaatataattttttttttgttatgaaaattatctcaatttcttggataataagtatcaccaatatttttaatatttgtga 6882999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 18781197 - 18781298
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||| |||||||||  ||||| ||||||| ||| ||| ||| |||||  |||||||||||||||    ||||||||||||||||| |  |||||||||    
T  18781197 attttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaatatcacatatatttttaatattagtaagatacattatt 18781296  T
Q  157 ag 158  Q
    ||    
T  18781297 ag 18781298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 41422864 - 41422921
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataa 114  Q
    |||||||||||||||| |||||  ||||||| ||||||||| | ||||||||||||||    
T  41422864 attttcaactaaaatataatttattttgttatgaaaattattccaatttcttggataa 41422921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 336
Target Start/End: Complemental strand, 7444035 - 7443970
Alignment:
Q  272 catgggatatatatagcaaatctcactaaaaaggc-caaaaatactaacagatgtcagcccattcc 336  Q
    ||||||||||||||||||||||  ||||||| |||  ||||| | |||||||| ||||||||||||    
T  7444035 catgggatatatatagcaaatcgaactaaaagggcaaaaaaacattaacagatttcagcccattcc 7443970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 9425217 - 9425278
Alignment:
Q  58 ttttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaat 119  Q
    |||||||||||||||  ||||| ||||||| ||| ||| ||  |||||||||||||||||||    
T  9425217 ttttcaactaaaatatcatttgttttgttatgaagattctctcaatttcttggataataaat 9425278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 25416076 - 25416117
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatc 98  Q
    |||||||||||||||| ||||||||||||||  |||||||||    
T  25416076 attttcaactaaaatataatttgctttgttatcaaaattatc 25416117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 9057456 - 9057388
Alignment:
Q  90 aaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattag 158  Q
    |||||||||  |||||||||||||||||||||   | |||| |||||| ||||||| | ||||||||||    
T  9057456 aaaattatctcaatttcttggataataaatatgaccaatatatttaattttagtgaggcacattattag 9057388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 31548826 - 31548874
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcacc 54  Q
    ||||| |||||| |||||||| || ||||||||||||||||||| ||||    
T  31548826 agaagtagagaacaatagcacttgcgaagtagactgaaattttaccacc 31548874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 8389263 - 8389594
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||    
T  8389263 agaagtagagaaaaataacacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatcctcattt 8389362  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||         |||  ||||||||||||||||||||    
T  8389363 cttggataataaatatcgtcgatatttttaatattaatgaagcacattattaggaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 8389462  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||| |    
T  8389463 tttgagcatattatcaagaacaaccaaatttttttataggagggtgtatatagaaatatttgtgttacatgggatatatatagaaaatttcactaaaagg 8389562  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    ||||||||||||||||||||||||||||||||    
T  8389563 gccaaaaatactaacagatgtcagcccattcc 8389594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 31072488 - 31072821
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31072488 agaagtagagaaaaatagcacatgtgaagtagactgaaattttaacaccttattttcaactaaaatagaatttgctttgttacgaaaattatcccaattt 31072587  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||         ||| |||||||||||||||||||||    
T  31072588 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagcaaagtgcccaaaaaaatatcacaaatttcttcgataataaatt 31072687  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatggg--atatatatagcaaatctcactaaaa 302  Q
    ||||||||||||||||||||||||||||       ||||||| |||||||||||||  |||||||| ||||||  |||||||||||||||||||||||||    
T  31072688 tttgagcatattatcaagaacaaccaaaattttttataggagtgtgtatatagaaaattttgtgttacatgggatatatatatagcaaatctcactaaaa 31072787  T
Q  303 aggccaaaaatactaacagatgtcagcccattcc 336  Q
     |||||||||||||||||||| ||| ||||||||    
T  31072788 gggccaaaaatactaacagatatcaacccattcc 31072821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 4540001 - 4539677
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||     ||||||||| ||||| ||||||||||  |||||    
T  4540001 agaagtagagaaaaatagcacatgcgaagtagactgaaattttagcaccctattttcaacta-----gaatttgctctgttatgaaaattatctcaattt 4539907  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||         |||  ||||||||||||||||||||    
T  4539906 cttggataataaatatcgtcgatatttttaatattagtgaagcacattattatgaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 4539807  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||| |    
T  4539806 tttgagcatattatcaagaacaaccaattttttttataggagggtgtatatagaa--atttgtgttacatgggatatatatagcaaatctcactaaaagg 4539709  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    || |||||||||||||||||||||||||||||    
T  4539708 gcgaaaaatactaacagatgtcagcccattcc 4539677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 20394749 - 20395082
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||| || ||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  20394749 agaagtagagaaaaatagcacatgcgaagtatactgaaattttagcagcccattttgaactaaaatagaatttgctttgttatgaaaattatcccaattt 20394848  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||         |||  ||||||||||||||||||||    
T  20394849 cttgaataataaatatcgtcgatatttttaatattagtgaagcacattattaagaaaaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 20394948  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatggg--atatatatagcaaatctcactaaaa 302  Q
    || ||||||||||| | ||||||||||        ||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||| ||||||    
T  20394949 ttcgagcatattattaggaacaaccaattttttttataggagggtgtatatagaaatatttgtgctgcatgggatatatatatagcaaatctctctaaaa 20395048  T
Q  303 aggccaaaaatactaacagatgtcagcccattcc 336  Q
    ||||| |||| | |||||||| ||||||||||||    
T  20395049 aggccgaaaacattaacagatttcagcccattcc 20395082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 12 - 334
Target Start/End: Original strand, 35477947 - 35478270
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| | ||||||||||  |||||||||||    
T  35477947 agagaaaaatagcacatccgaagtagactgaaattttagcaccccattatcaaataaaatagaatttgctttgtaatgaaaattatctcaatttcttgga 35478046  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| ||  |||||||||         |||  ||||||||||||||||||||||  ||    
T  35478047 taataaatatcgtcgatatttttaatattagcgaagcacattattaagaacaaagggcccaataaaatatcactaatttcttcgataataaattttcaag 35478146  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| ||||||||||||        |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| | ||| |||    
T  35478147 catattattaagaacaaccaattttttttataggagggtgtatatagaaatttttgtgctgcatgggatatatatagcgaatctcactaatagggcaaaa 35478246  T
Q  311 aatactaacagatgtcagcccatt 334  Q
    || | ||| |||| |||| |||||    
T  35478247 aacattaatagatttcagtccatt 35478270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 12 - 334
Target Start/End: Complemental strand, 13754249 - 13753926
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| | ||||||||||  |||||||||||    
T  13754249 agagaaaaatagcacatgcgaagtagactgaaattttagcaccccattatcaaataaaatagaatttgctttgtaatgaaaattatctcaatttcttgga 13754150  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| ||  |||||||||         |||  | |||||| |||||||||||||  ||    
T  13754149 taataaatatcgttgatatttttaatattagtgaagcacattattaagaacaaagggcccaataaaatatcactattttctttgataataaattttcaag 13754050  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| ||||||||||||        |||||||||||||||||||||| |||||| ||||||||||||||||||  ||||||||||| | ||| |||    
T  13754049 catattattaagaacaaccaattttttttataggagggtgtatatagaaatttttgtgctgcatgggatatatatagtgaatctcactaatagggcaaaa 13753950  T
Q  311 aatactaacagatgtcagcccatt 334  Q
    || | ||| |||| ||||| ||||    
T  13753949 aacattaatagatttcagctcatt 13753926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 12 - 334
Target Start/End: Complemental strand, 18667502 - 18667179
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| | ||  ||||| ||||||||||||| | ||||||||||  |||||||||||    
T  18667502 agagaaaaatagcacatgcgaagtagactgaaattttagcaccccattataaaaaaaaattgaatttgctttgtaatgaaaattatctcaatttcttgga 18667403  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| ||  |||||||||         |||  ||||||||||||||||||||||  ||    
T  18667402 taataaatattgtcgatatttttaatattagtgaagcacattattaagaacaaagggcccagtaaaatatcactaatttcttcgataataaattttcaag 18667303  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| ||||| ||||||        ||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||| | ||| |||    
T  18667302 catattattaagaataaccaatttcttttataggagagtgtatatagaaatttttgtgctgcatgggatatatatagcaaatctcactaatagggcaaaa 18667203  T
Q  311 aatactaacagatgtcagcccatt 334  Q
    || | ||| |||| ||||||||||    
T  18667202 aacattaatagatttcagcccatt 18667179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 1623704 - 1623572
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  1623704 agaagtagagaaaaatagcacatgtgaagtataatgaaattttagcaccctattttcaactaaa-tagaatttgctttgttacgaaaattatcccaattt 1623606  T
Q  106 cttggataataaatatcgtcgatatttttaatat 139  Q
    |||||||||||||||| |||||||||||||||||    
T  1623605 cttggataataaatattgtcgatatttttaatat 1623572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 39038906 - 39039020
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||| |||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||||||||  | ||||||||||||||||||| | |||||||     
T  39038906 atttttaactaaaatataatttgttttgttacgaaaattatcccaatttcttggacaataaatatcaccaatatttttaatattagtgaggcacattatg 39039005  T
Q  157 aggagtaaagggccc 171  Q
    |||| ||||||||||    
T  39039006 aggaataaagggccc 39039020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 41822150 - 41822253
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||| ||||| |||| |||||  ||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | ||||||||    
T  41822150 atttttaactataatataatttattttgttatgaaaattatccaaatttcttggataataaatatcatcaatatttttaatattagtgaggcacattatt 41822249  T
Q  157 agga 160  Q
    ||||    
T  41822250 agga 41822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 21863688 - 21863585
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||||||||||| ||||||||||  ||||||||| ||||||||||||  | ||||||||||||||||||  | ||||||||    
T  21863688 attttcaactaaaatataatttgctttgttatgaaaattatctcaatttcttgaataataaatatcaccaatatttttaatattagtggggcacattatt 21863589  T
Q  157 agga 160  Q
    ||||    
T  21863588 agga 21863585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 29636906 - 29637017
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||  ||||||||||| ||||| |||||||||||||||| || ||||||||||||||||| |   ||||||||    
T  29636906 attttcaactaaaatataatttgttttgttttgaaaattatcccaatttattggataataaatatcatcaatatttttaatattagtcagacacattatt 29637005  T
Q  157 aggagtaaaggg 168  Q
    || | |||||||    
T  29637006 agaaataaaggg 29637017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 40934135 - 40934025
Alignment:
Q  59 tttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattag 158  Q
    |||||||||||| | |||||| |||||||  ||||||||||||||||||||||||||||||||  || |||||||||||||||||||   ||||||||||    
T  40934135 tttcaactaaaacataatttgttttgttat-aaaattatccaaatttcttggataataaatatgatcaatatttttaatattagtgagacacattattag 40934037  T
Q  159 gagtaaagggcc 170  Q
    ||| ||| ||||    
T  40934036 gagcaaatggcc 40934025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 24441942 - 24442045
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||| |||||| |||||| |||||||  |||||||||| ||||| ||||||||||||||||  | |||||||||||||||||  || ||||||||    
T  24441942 attttcaacaaaaatataatttgttttgttattaaaattatcccaatttattggataataaatatcaccaatatttttaatattagttgagcacattatt 24442041  T
Q  157 agga 160  Q
    ||||    
T  24442042 agga 24442045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 43179440 - 43179542
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||| |||||||||| |||||| |||||||  |||||||||| ||||||||||||||||||||||  |  |||||| ||||||||||| ||||||||||    
T  43179440 atttttaactaaaatataatttgttttgttat-aaaattatcccaatttcttggataataaatatcaccagtattttcaatattagtgaggtacattatt 43179538  T
Q  157 agga 160  Q
    ||||    
T  43179539 agga 43179542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 44733724 - 44733624
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||||||| ||||||||  ||||||| ||||||||||  | |||||||||||||||||||| |||||||||| |||||||||||   ||||||||    
T  44733724 attttcaactaaattagaatttattttgttatgaaaattatctca-tttcttggataataaatatcatcgatattttcaatattagtgacacacattatt 44733626  T
Q  157 ag 158  Q
    ||    
T  44733625 ag 44733624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 28460258 - 28460345
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtga 145  Q
    ||||||||||||||||  ||||| |||||||  ||||||||||||| |||||||||||||||||||  | |||||||||||| ||||||    
T  28460258 attttcaactaaaatatcatttgttttgttaa-aaaattatccaaacttcttggataataaatatcaccaatatttttaatactagtga 28460345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 6189418 - 6189532
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| || |||| ||| |||||  |||||||||||||||    ||||||||||||||||| |   ||||||||    
T  6189418 attttcaactaaaatataatttgttttgttaagagaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 6189517  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  6189518 aggaacaaagggccc 6189532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 48636782 - 48636668
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| || |||| ||||||| ||| ||||| ||||||||||||||||     |||||||||||||||| |   ||||||||    
T  48636782 attttcaactaaaatataatttgtttggttatgaaaattctcccaattttttggataataaatatcacatgtatttttaatattagtaagacacattatt 48636683  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  48636682 aggaacaaagggccc 48636668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 3124281 - 3124354
Alignment:
Q  66 taaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatat 139  Q
    ||||||| |||||| ||||||| ||||| ||||  |||||| ||||||||||||||| ||||||||||||||||    
T  3124281 taaaataaaatttgttttgttatgaaaaatatctcaatttcctggataataaatatcatcgatatttttaatat 3124354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 5770928 - 5770852
Alignment:
Q  95 tatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc 171  Q
    ||||| ||||||||||||||||||||||  | |||||||||||||||||||   ||||||||||||  |||||||||    
T  5770928 tatcccaatttcttggataataaatatcaccaatatttttaatattagtgagacacattattaggaacaaagggccc 5770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 141
Target Start/End: Complemental strand, 9420544 - 9420460
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatatta 141  Q
    |||||||||||||||| |||||  ||||||| |||||| |||| ||||||||||||||||||| ||  | ||||||| |||||||    
T  9420544 attttcaactaaaataaaatttattttgttatgaaaataatcctaatttcttggataataaatttcaacaatattttaaatatta 9420460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 23381165 - 23381105
Alignment:
Q  85 ttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtga 145  Q
    ||||||||||||||| ||||| |||||| |||||||||  |||||||||||||||||||||    
T  23381165 ttacgaaaattatcccaattttttggatgataaatatcaccgatatttttaatattagtga 23381105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 8113929 - 8114017
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaa 146  Q
    ||||||||||||||||| ||||||  |||||| |||||||| || || || ||||||||||||||||  | ||||||||||||||| ||||    
T  8113929 tattttcaactaaaatataatttg--ttgttatgaaaattaccccaacttattggataataaatatcaccaatatttttaatattaatgaa 8114017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 330
Target Start/End: Complemental strand, 44733480 - 44733341
Alignment:
Q  191 ttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaa 290  Q
    |||||||||| |||||| | || ||||| |||||||||||||       |||| | |||||||||||||||||||||| | | |||| |||||| |||||    
T  44733480 ttcgataatagatttttcaacacattattaagaacaaccaaatctttttatagtatggtgtatatagaaatatttgtgctacgtggggtatatacagcaa 44733381  T
Q  291 atctcactaaaaaggccaaaaatactaacagatgtcagcc 330  Q
    ||| | | ||||  || ||||| | |||||||| ||||||    
T  44733380 atcacgccaaaagagcaaaaaacattaacagatttcagcc 44733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 48238539 - 48238426
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||| | | |||||  |||||||||||||||    ||||||||||| ||||| |   ||||||||    
T  48238539 attttcaactaaaatataatttgttttgttatgaaaattcttccaattttctggataataaatatcacatatatttttaat-ttagtaagacacattatt 48238441  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  48238440 aggaacaaagggccc 48238426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 8069660 - 8069595
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatc 122  Q
    |||||||||||||||| |||||| ||||||| || |||| ||| |||||  |||||||||||||||    
T  8069660 attttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatc 8069595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 14574225 - 14574177
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcacc 54  Q
    ||||||| |||| ||||| ||||| ||||||||||||||||||||||||    
T  14574225 agaagcatagaacaatagaacatgcgaagtagactgaaattttagcacc 14574177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 35118262 - 35118348
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtga 145  Q
    ||||||||||||||||| |||||| |||||||  |||||| ||  ||||| |||||||||||||||   | |||| ||||||||||||||    
T  35118262 tattttcaactaaaatataatttgttttgtta-taaaattctc--aatttattggataataaatatgaccaatatatttaatattagtga 35118348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 43824209 - 43824168
Alignment:
Q  185 aatttcttcgataataaatttttgagcatattatcaagaaca 226  Q
    |||||||| |||||||||||||||| |||||||| |||||||    
T  43824209 aatttctttgataataaatttttgatcatattattaagaaca 43824168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 10015748 - 10015812
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatat 121  Q
    ||||||||||||||||   |||| ||||||||||| ||| ||  |||||||| ||||||||||||    
T  10015748 attttcaactaaaatatcgtttgttttgttacgaagattctcacaatttcttagataataaatat 10015812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 21863999 - 21863951
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcacc 54  Q
    ||||| |||||| |||||||| || |||||||| |||||||||||||||    
T  21863999 agaagtagagaacaatagcacctgcgaagtagagtgaaattttagcacc 21863951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 28460368 - 28460420
Alignment:
Q  180 tcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaa 232  Q
    |||| ||||||||||||||||| |||||  ||| ||||| |||||||||||||    
T  28460368 tcattaatttcttcgataataatttttttggcacattattaagaacaaccaaa 28460420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-118; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 6 - 336
Target Start/End: Original strand, 13382564 - 13382896
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13382564 agaagtagagaaaaatagcacatgtgaagtagaatgaaattttggcaccctattttcaactaaaatagaatttgctttgttacgaaaattatcccaattt 13382663  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||         |||  |||||||| |||||||||||    
T  13382664 cttggataataaatatcgtcgatatttttaatattagtgaagcacattattaggagtaaagggcccaaaaaaatatcaccaatttcttagataataaatt 13382763  T
Q  205 tttgagcatattatcaagaacaaccaa-annnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaa 303  Q
    |||||||||||||||||||||||||||         |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||     
T  13382764 tttgagcatattatcaagaacaaccaatttttttttataggagggtgtatatagaaaattttgtgttacatgggatatatatagcaaatctcactaaaag 13382863  T
Q  304 ggccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||||||||||||||||||||| ||||||    
T  13382864 ggccaaaaatactaacagatgtcagctcattcc 13382896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 2677104 - 2676774
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||  ||||    
T  2677104 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccatattttcaactaaa-tagaatttgctttgttatgaaaattatcctcattt 2677006  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||         |||  ||||||||||||||||||||    
T  2677005 cttggataataaatatcgtcgatatttttaatattaatgaagcacattattaggaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 2676906  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    ||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |    
T  2676905 tttaagcatattatcaagaacaaccaaatttttttataggagggtgtatatagaaatatttgtgttacatgggatatatatagaaaatctcactaaaagg 2676806  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    ||||||||||||||||||||||||||||||||    
T  2676805 gccaaaaatactaacagatgtcagcccattcc 2676774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 23962990 - 23962660
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||    
T  23962990 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttatgaaaattatctcaattt 23962891  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    ||||||||||||||||||| |||||||||||||||| ||||| || |||||||||  |||||||||         |||  ||||||||||||||||||||    
T  23962890 cttggataataaatatcgttgatatttttaatattaatgaagcacgttattaggaacaaagggcccaaaaaaatatcaccaatttcttcgataataaatt 23962791  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||    
T  23962790 tttgagcatattatcaagaacaaccaaatttttttataggagggtgtatatagaaatgtttgtgttacattggatatatatagcaaatctcact-aaaag 23962692  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    | ||| |||||||| |||||||||||||||||    
T  23962691 ggcaacaatactaatagatgtcagcccattcc 23962660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 336
Target Start/End: Complemental strand, 18889208 - 18888877
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||| ||| || ||||| ||||||||||  |||||    
T  18889208 agaagtagagaaaaataactcatgcgaagtagactgaaattttagcaccctattttcaactaaactagagttttctctgttatgaaaattatctcaattt 18889109  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||         ||| |||||||||||||||||||||    
T  18889108 cttggataataaatatcgtcgatatttttaatattagtgaagcacattattaggagcaaagggcccaaaaaaatatcacaaatttcttcgataataaatt 18889009  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||| |||||||| |||||||||||| || ||||||||||||||| |    
T  18889008 tttgagcatattatcaagaacaaccaattttttttataggagggtgtatatagaaatttttgtgttacatgggatatatctaacaaatctcactaaaagg 18888909  T
Q  305 gccaaaaatactaacagatgtcagcccattcc 336  Q
    || |||||||||||||||||||||||||||||    
T  18888908 gcaaaaaatactaacagatgtcagcccattcc 18888877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 12 - 336
Target Start/End: Original strand, 9409522 - 9409847
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    ||||||||||||||||||    ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  9409522 agagaaaaatagcacatgcatggtaaactaaaattttagcaccccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttgga 9409621  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||         |||| ||||||||||||||||||||||| ||    
T  9409622 taaaaaatatcgtcgatatttttaatattagtgaagcacattattaggaaaaaaggacccaaaaaaatatcattaatttcttcgataataaattttttag 9409721  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| |||||||||||||       |||||||||||||||||||||||||||||   |||||||||||||||  |||||||||||||| |||||||    
T  9409722 catattattaagaacaaccaaaaaaaattataggagggtgtatatagaaatatttgtgccacatgggatatatataataaatctcactaaaagggccaaa 9409821  T
Q  311 aatactaacagatgtcagcccattcc 336  Q
    || | |||||||| ||||||||||||    
T  9409822 aacattaacagatttcagcccattcc 9409847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 12 - 336
Target Start/End: Complemental strand, 42879729 - 42879404
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    ||||||||||||||||||   |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  42879729 agagaaaaatagcacatgcatagtaaactaaaattttagcaccccattttcaactaaaatagaatttgctttgttataaaaattatcccaatttcttgga 42879630  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    ||| |||||||||| ||||||||||||||||||||  |||||||||||| |||||| |||         |||| ||||||||||||||||||||||||||    
T  42879629 taaaaaatatcgtcaatatttttaatattagtgaaacacattattaggaataaaggacccaaaaaaatatcattaatttcttcgataataaatttttgag 42879530  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| |||||||| ||||       ||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||| |||||||    
T  42879529 catattattaagaacaatcaaaaaaagttataggagggtgtatatagaaatatttgtaccacatgggatatatatagtaaatctcactaaaagggccaaa 42879430  T
Q  311 aatactaacagatgtcagcccattcc 336  Q
    || | |||||||| ||||||||||||    
T  42879429 aacattaacagatttcagcccattcc 42879404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 14 - 336
Target Start/End: Complemental strand, 13490522 - 13490198
Alignment:
Q  14 agaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggata 113  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||  |||||||||||||    
T  13490522 agaaaaatagcacatgcgaagtagactgaaattttagcaccccattttcaactaaaatagaatttgctttgttatgaaaatcatctcaatttcttggata 13490423  T
Q  114 ataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaaggg-cccnnnnnnnntcataaatttcttcgataataaatttttgagca 212  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||| ||         |||  |||||||||||||||||||||| |||||    
T  13490422 ataaatattgtcgatatttttaatattagtgaagtacattattaggaacaaagggtccaaaaaaatatcaccaatttcttcgataataaattttcgagca 13490323  T
Q  213 tattatcaagaacaaccaaa-nnnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggc-caaa 310  Q
    |||||| |||||||||||||        |||||||||||| ||||||||| | |||| |||||||||||||||||||||||| |||||||| |||  |||    
T  13490322 tattattaagaacaaccaaattttttttataggagggtgtgtatagaaat-tgtgtgctgcatgggatatatatagcaaatcacactaaaagggcaaaaa 13490224  T
Q  311 aatactaacagatgtcagcccattcc 336  Q
    || | |||||||| |||| |||||||    
T  13490223 aacattaacagatttcagtccattcc 13490198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 12 - 336
Target Start/End: Original strand, 5578578 - 5578900
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    |||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  5578578 agagaaaaatagcatatgcaaagtagactgaaattttagcaccccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttgga 5578677  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||         |||  |||||||| ||||||||||||| |||    
T  5578678 taataaatatcgtcgatatttttaatattagtgaagcacattattaggaacaaagggcccaaaaaaatatcaccaatttctttgataataaattttcgag 5578777  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    ||||||||   |||||||| ||       | | ||||||||||||||| || |||||| | |||||||||||||||||| ||||| |||||| |||||||    
T  5578778 catattat--tgaacaacc-aatttttttacacgagggtgtatatagatatttttgtgctacatgggatatatatagcatatctctctaaaagggccaaa 5578874  T
Q  311 aatactaacagatgtcagcccattcc 336  Q
    || | |||||||| |||| |||||||    
T  5578875 aacattaacagatttcagtccattcc 5578900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 6 - 334
Target Start/End: Original strand, 39537363 - 39537680
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||             
T  39537363 agaagtagagaaaaatagcacatgcgaagtaaactgaaattttagcaccccattttcaactaaaataaaatttgctttgttatgaaaatta--------- 39537453  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
     || ||||||||||| |||||||||||||||||| ||||||| ||||||||||||  |||||||||         |||  |||||||||||||||| |||    
T  39537454 -ttcgataataaatagcgtcgatatttttaatatcagtgaagcacattattaggaacaaagggcccaaaaaaatatcaccaatttcttcgataatatatt 39537552  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaag 304  Q
    || ||||||||||| |||||||| |||        |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| |    
T  39537553 ttcgagcatattattaagaacaatcaatgttttttataggagggtgtatatagaaat-tttgtgctgcatgggatatatatagcaaatctcact-aaagg 39537650  T
Q  305 gccaaaaatactaacagatgtcagcccatt 334  Q
    |||||||| |  ||||||| ||||||||||    
T  39537651 gccaaaaaaataaacagatttcagcccatt 39537680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 56 - 293
Target Start/End: Original strand, 13826234 - 13826471
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattat 155  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||   |||||||    
T  13826234 tattttcaactaaaatagaatttgttttgttatgaaaattatcccaatttcttggataataaatatcatcgatatttttaatattagtgagacacattat 13826333  T
Q  156 taggagtaaagggcccnnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatat 255  Q
    |||||  ||||||| |        |||   |||||||||||| |||||||||||||| ||||| ||||||||||||        | | ||||||||||||    
T  13826334 taggaacaaagggcacaaaaaatatcactgatttcttcgatagtaaatttttgagcacattattaagaacaaccaattttttttacaagagggtgtatat 13826433  T
Q  256 agaaatatttgtgttgcatgggatatatatagcaaatc 293  Q
    ||||||| ||||| | |||||| |||||||||||||||    
T  13826434 agaaatacttgtgctacatggggtatatatagcaaatc 13826471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 57 - 293
Target Start/End: Original strand, 16040201 - 16040438
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||| |||||||  ||||| ||||||| ||||||||||  |||||||| ||||| |||||||  | |||||||| | ||||||||   ||||||||    
T  16040201 attttcaattaaaataagatttgttttgttatgaaaattatctcaatttctttgataaaaaatatcaccaatattttttaaattagtgagacacattatt 16040300  T
Q  157 aggagtaaagggcccnnnnnnnn-tcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatat 255  Q
    ||||  |||||||||         |||  ||||||||| |||| ||||||||||||| ||||| ||||||||||||        |||||||||| |||||    
T  16040301 aggaacaaagggcccaaaaaaatatcactaatttcttcaataacaaatttttgagcacattattaagaacaaccaattttttttataggagggtttatat 16040400  T
Q  256 agaaatatttgtgttgcatgggatatatatagcaaatc 293  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  16040401 agaaatatttgtgctacatgggatatatatagcaaatc 16040438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 29789634 - 29789522
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||  |||||||||| |||| ||||| | ||||| ||    
T  29789634 attttcaactaaaatagaatttgttttgttatgaaaattattccaatttcttggataataaatatcaccgatattttttatatcagtgaggcacattttt 29789535  T
Q  157 aggagtaaagggc 169  Q
    ||||  |||||||    
T  29789534 aggaacaaagggc 29789522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 69 - 261
Target Start/End: Original strand, 20892294 - 20892487
Alignment:
Q  69 aatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaaggg 168  Q
    ||||||||||| ||||||  ||||||||||| || |||||||| |||||||||| || ||||||||||||||||||| | ||||||||||||  | |||     
T  20892294 aatagaatttgttttgttttgaaaattatcccaaattcttggaaaataaatatcatcaatatttttaatattagtgaggcacattattaggaacatagga 20892393  T
Q  169 ccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaat 261  Q
    |||         |||  |||| |||||||||||| |||||||||||||||| |||||||| ||||       |||||||||| |||||||||||    
T  20892394 cccaaaaaaatatcaccaattacttcgataataattttttgagcatattattaagaacaatcaaaaaaatttataggagggtatatatagaaat 20892487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 13820884 - 13820987
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |||||||||||   | ||||||||||| |||||||   ||||||||    
T  13820884 attttcaactaaaatagattttgttttgttatgaaaattatccaaatttcttgaataataaatatgaccaatatttttaatgttagtgagacacattatt 13820983  T
Q  157 agga 160  Q
    ||||    
T  13820984 agga 13820987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 29149741 - 29149639
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| ||||||||| |||| ||||||||||  ||||| ||||||||||||||||    ||||||||||||||| ||| | ||||||||    
T  29149741 attttcaactaaaataaaatttgctt-gttatgaaaattatctcaattttttggataataaatatcacaaatatttttaatattaatgaggcacattatt 29149643  T
Q  157 agga 160  Q
    ||||    
T  29149642 agga 29149639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 38491126 - 38491012
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||| ||| |||||  |||||||||||||||    ||||||||||||||||| |   ||||||||    
T  38491126 attttcaactaaaatataatttgttttgttatgaaaattctcctaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 38491027  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  38491026 aggaacaaagggccc 38491012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 8806334 - 8806430
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacatta 154  Q
    |||||||||||||||| |||||| |||||||  |||||||||| |||||||||||||||||||||     ||||||||||||||||||| | ||||||    
T  8806334 attttcaactaaaatataatttgttttgttat-aaaattatcccaatttcttggataataaatatgacaaatatttttaatattagtgaggcacatta 8806430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 43171438 - 43171517
Alignment:
Q  81 tttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattagga 160  Q
    ||||||| ||||||||||  ||| | ||||||||||||||||  | ||||||||||||||||||||| ||||||||||||    
T  43171438 tttgttatgaaaattatctcaatatattggataataaatatcaccaatatttttaatattagtgaagcacattattagga 43171517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 7850394 - 7850280
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| ||||||| ||  |||||  |||||||||||||||    ||||||||||||||||| |   ||||||||    
T  7850394 attttcaactaaaatataatttgttttgttatgaaaattctctcaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 7850295  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  7850294 aggaacaaagggccc 7850280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 37134818 - 37134752
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatc 122  Q
    ||||||||||||||||| |||||| ||||||| ||||||||| | |||||||| |||||||||||||    
T  37134818 tattttcaactaaaatataatttgttttgttatgaaaattattccaatttcttagataataaatatc 37134752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 200
Target Start/End: Original strand, 38915727 - 38915872
Alignment:
Q  54 cctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacatt 153  Q
    ||||||||||||||||||| |  ||  |||||||  |||||||||| |||||||||||||||||||||     |||| |||||||||||||| | |||||    
T  38915727 cctattttcaactaaaatatatatttttttgttat-aaaattatcccaatttcttggataataaatatgactaatatatttaatattagtgaggcacatt 38915825  T
Q  154 attaggagtaaagggcccnnnnnnnntcataaatttcttcgataata 200  Q
    |||||||  |||||||||        ||||||||||||| |||||||    
T  38915826 attaggaacaaagggccccaaaaatatcataaatttctttgataata 38915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 141
Target Start/End: Complemental strand, 3654760 - 3654677
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatatta 141  Q
    |||||||||||||||| |||||  ||||| |  |||||||||  |||||||||||||||||||||| || |||||||||||||||    
T  3654760 attttcaactaaaatataatttattttgtaat-aaaattatcttaatttcttggataataaatatcatcaatatttttaatatta 3654677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 5121205 - 5121308
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||| ||||||| |||||| ||| ||| |||||||||   ||||| ||||||||||||||||  | ||||||||||||||| |||   ||||||||    
T  5121205 attttcaattaaaataaaatttgttttattatgaaaattatttcaattttttggataataaatatcaccaatatttttaatattattgagccacattatt 5121304  T
Q  157 agga 160  Q
    ||||    
T  5121305 agga 5121308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 6769377 - 6769489
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattat 155  Q
    |||||| |||||||||| |||||| |||||||  |||||| ||  |||||||||||||||||||||  || |||| |||||||||| ||| | |||||||    
T  6769377 tatttttaactaaaatataatttgttttgttat-aaaattctc--aatttcttggataataaatatgatcaatatatttaatattattgaggcacattat 6769473  T
Q  156 taggagtaaagggccc 171  Q
    ||| |  |||||||||    
T  6769474 tagaaacaaagggccc 6769489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 37134748 - 37134620
Alignment:
Q  185 aatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgg-gatatat 283  Q
    ||||| |||||||||||||||||  ||| ||| | ||||||| |||||       |||||||||||||||||||||||||| || |  | || | |||||    
T  37134748 aattttttcgataataaattttttggcacattgttaagaacatccaaaaaaaattataggagggtgtatatagaaatatttctgctatacggtggtatat 37134649  T
Q  284 atagcaaatctcactaaaaaggccaaaaa 312  Q
    ||||||||| |||| |||| |||||||||    
T  37134648 atagcaaatatcaccaaaagggccaaaaa 37134620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 13820575 - 13820624
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccc 55  Q
    ||||| |||||| || | ||||||||||||||||||||||||||||||||    
T  13820575 agaagtagagaacaacaacacatgtgaagtagactgaaattttagcaccc 13820624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 32698846 - 32698782
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatat 121  Q
    ||||||||||||||||   |||| ||||||||||| ||| ||  |||||||| ||||||||||||    
T  32698846 attttcaactaaaatatcgtttgttttgttacgaagattctcacaatttcttagataataaatat 32698782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 43170985 - 43171033
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcacc 54  Q
    |||||||  ||| ||||||||||| ||||||||||| ||||||||||||    
T  43170985 agaagcatggaacaatagcacatgcgaagtagactgtaattttagcacc 43171033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 6 - 335
Target Start/End: Original strand, 10094986 - 10095318
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaattt 105  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  10094986 agaagtagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaattaaaatagaatttgctttgttatgaaaattatcccaattt 10095085  T
Q  106 cttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatt 204  Q
    |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||  |||| ||||         |||  |||||||||||||||| |||    
T  10095086 cttggataataaatatcgtcaatatttttaatattaatgaagcacattattaggaacaaagagcccaaaaaaatatcaccaatttcttcgataatacatt 10095185  T
Q  205 tttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatggg--atatatatagcaaatctcactaaaa 302  Q
    ||||||||||| ||||||||||||||||       ||||||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  10095186 tttgagcatataatcaagaacaaccaaatttttttataggagggtgcatatagaaatatttgtgttacatgggatatatatatagcaaatctcactaaaa 10095285  T
Q  303 aggccaaaaatactaacagatgtcagcccattc 335  Q
    |||||||||||||||||||||||||||||||||    
T  10095286 aggccaaaaatactaacagatgtcagcccattc 10095318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 334
Target Start/End: Original strand, 7413714 - 7414036
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  7413714 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaattttcttt-ttacgaaaattatcccaatttcttgga 7413812  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||          ||  ||||||||||||| ||||||||| ||    
T  7413813 taataaatatcgtcgatatttttaatattagtgaagcacattattaggaacaaagggcccaaaaaaatagcaccaatttcttcgatagtaaattttttag 7413912  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| |||||||||||||       ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  7413913 catattatgaagaacaaccaaatttttttataagagggtgtatatagaaatatttgtgttatatgggatatatatagcaaatctcactaaaagggccaaa 7414012  T
Q  311 aatactaacagatgtcagcccatt 334  Q
    ||||||||||||||||||||||||    
T  7414013 aatactaacagatgtcagcccatt 7414036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 334
Target Start/End: Original strand, 7459795 - 7460117
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  7459795 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaattttcttt-ttacgaaaattatcccaatttcttgga 7459893  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||          ||  ||||||||||||| ||||||||| ||    
T  7459894 taataaatatcgtcgatatttttaatattagtgaagcacattattaggaacaaagggcccaaaaaaatagcaccaatttcttcgatagtaaattttttag 7459993  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaa 310  Q
    |||||||| |||||||||||||       ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  7459994 catattatgaagaacaaccaaatttttttataagagggtgtatatagaaatatttgtgttatatgggatatatatagcaaatctcactaaaagggccaaa 7460093  T
Q  311 aatactaacagatgtcagcccatt 334  Q
    ||||||||||||||||||||||||    
T  7460094 aatactaacagatgtcagcccatt 7460117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 12 - 336
Target Start/End: Original strand, 39480221 - 39480548
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttgga 111  Q
    ||||||||||||||||||    ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  39480221 agagaaaaatagcacatgcatggtaaactaaaattttagcaccccattttcaactaaaatagaatttgctttgttatgaaaattatcccaatttcttgga 39480320  T
Q  112 taataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgag 210  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||         ||||  ||||||| |||||||||||||||||    
T  39480321 taaaaaatatcgtcgatatttttaatattagtgaagcacattattaggaacaaaggacccaaaaaaatatcatttatttctttgataataaatttttgag 39480420  T
Q  211 catattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatggg--atatatatagcaaatctcactaaaaaggcca 308  Q
    |||||||| |||||||||||||        ||||||||||||||||||||||||||||   ||||||  |||||||||| |||||||||||||| ||| |    
T  39480421 catattattaagaacaaccaaaaaaaattgtaggagggtgtatatagaaatatttgtgccacatgggatatatatatagtaaatctcactaaaagggcaa 39480520  T
Q  309 aaaatactaacagatgtcagcccattcc 336  Q
    |||| | |||||||| ||||||||||||    
T  39480521 aaaacattaacagatttcagcccattcc 39480548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 10 - 336
Target Start/End: Complemental strand, 36213868 - 36213544
Alignment:
Q  10 gcagagaaaaatagcacatgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttg 109  Q
    ||||||||||||||||||||   |||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||   ||||||||| ||||||||     
T  36213868 gcagagaaaaatagcacatgcatagtaaactaaaattttagcaccccattttcaactaaaatagaatttgttttgtta-ttaaattatcccaatttctta 36213770  T
Q  110 gat-aataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaagg-gcccnnnnnnnntcataaatttcttcgataataaattttt 207  Q
    ||| || |||||||||| ||| ||||||||||||||||| |||||||||||| ||||||  ||         |||| |||||||||||||||||| ||||    
T  36213769 gataaaaaaatatcgtcaata-ttttaatattagtgaagcacattattaggaataaaggatccaaaaaaatatcattaatttcttcgataataaaatttt 36213671  T
Q  208 gagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggcc 307  Q
    ||||||||||| ||||||||  |||       ||||||||||||||||||||||||||||    |||||||||||||||  |||||||||||||| ||||    
T  36213670 gagcatattattaagaacaa--aaaaaaaattataggagggtgtatatagaaatatttgtaccacatgggatatatataataaatctcactaaaagggcc 36213573  T
Q  308 aaaaatactaacagatgtcagcccattcc 336  Q
    ||||| | |||||||| ||||||||||||    
T  36213572 aaaaacattaacagatttcagcccattcc 36213544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 57 - 332
Target Start/End: Complemental strand, 52459105 - 52458830
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||   ||||||||    
T  52459105 attttcaactaaaatagaatttgttttgttatgaaaaatatcccaatttcttggataataaatatcatcgatatttttaatattagtgagacacattatt 52459006  T
Q  157 aggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatat 255  Q
    ||||  |||||||||         ||| ||||||||||||| ||||||||||||||| ||||| |||||||||| ||       ||||||||||||||||    
T  52459005 aggaacaaagggcccaaaaaaatatcacaaatttcttcgatgataaatttttgagcacattattaagaacaacc-aattttattataggagggtgtatat 52458907  T
Q  256 agaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatactaacagatgtcagccca 332  Q
    |||||| |||||| | |||||||||||||||||||||  | | |||| ||| ||||| | |||||||| ||||||||    
T  52458906 agaaatgtttgtgatacatgggatatatatagcaaattgcgccaaaagggcaaaaaacattaacagatttcagccca 52458830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 57 - 332
Target Start/End: Complemental strand, 52460362 - 52460087
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||   ||||||||    
T  52460362 attttcaactaaaatagaatttgttttgttatgaaaaatatcccaatttcttggataataaatatcatcgatatttttaatattagtgagacacattatt 52460263  T
Q  157 aggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatat 255  Q
    ||||  |||||||||         ||| ||||||||||||| ||||||||||||||| ||||| |||||||||| ||       ||||||||||||||||    
T  52460262 aggaacaaagggcccaaaaaaatatcacaaatttcttcgatgataaatttttgagcacattattaagaacaacc-aattttattataggagggtgtatat 52460164  T
Q  256 agaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatactaacagatgtcagccca 332  Q
    |||||| |||||| | |||||||||||||||||||||  | | |||| ||| ||||| | |||||||| ||||||||    
T  52460163 agaaatgtttgtgatacatgggatatatatagcaaattgcgccaaaagggcaaaaaacattaacagatttcagccca 52460087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 42 - 228
Target Start/End: Original strand, 6261581 - 6261768
Alignment:
Q  42 aaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatatta 141  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| ||||||| || |||||||||||||||    
T  6261581 aaattttagccccccatttttaactaaaatagaatttgctttgttatgaaaattatcccaatttattgaataaaaaatatcatcaatatttttaatatta 6261680  T
Q  142 gtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaac 228  Q
    |||||| ||||||||||||  ||||| |||         |||| ||||| ||||||| |||||||||||||||||||| |||||||||    
T  6261681 gtgaagcacattattaggaacaaaggacccaaaaaaatatcattaatttattcgatagtaaatttttgagcatattattaagaacaac 6261768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 55 - 231
Target Start/End: Complemental strand, 13957341 - 13957165
Alignment:
Q  55 ctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacatta 154  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||    |||||||| |||||||||||| ||||||    
T  13957341 ctattttcaactaaaatataatttgttttgttacgaaaattatcccaatttattggataataaatatcactaatatttttcatattagtgaagcacatta 13957242  T
Q  155 ttaggagtaaagggcccnnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaa 231  Q
    ||||||  |||||||||        |||  ||||||||||||||||| ||||  |||| ||||| ||||||||||||    
T  13957241 ttaggaacaaagggcccaaaaaatatcactaatttcttcgataataatttttctagcacattattaagaacaaccaa 13957165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 195 - 336
Target Start/End: Original strand, 6261771 - 6261913
Alignment:
Q  195 ataataaatttttgagcatattatcaagaacaaccaaannnnnnn-ataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatc 293  Q
    |||||||||||||||||||||||| ||||||||| |||        |||||||||||||||||||||||||||||   |||||||||||||||| |||||    
T  6261771 ataataaatttttgagcatattattaagaacaacaaaaaaaaaattataggagggtgtatatagaaatatttgtgccacatgggatatatatagtaaatc 6261870  T
Q  294 tcactaaaaaggccaaaaatactaacagatgtcagcccattcc 336  Q
    ||||||||| ||||||||| | |||||||| ||||||||||||    
T  6261871 tcactaaaagggccaaaaacattaacagatttcagcccattcc 6261913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 9921866 - 9921969
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||   ||||||||    
T  9921866 attttcaactaaaatataatttgttttattacgaaaattatcccaatttcttggataataaatatcatcaatatttttaatattagtgagacacattatt 9921965  T
Q  157 agga 160  Q
    ||||    
T  9921966 agga 9921969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 10142232 - 10142056
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||| ||||||| |||||| ||||||| ||||||||||| ||||| ||||||||||||||||  | ||||||||||||||||||||| ||||||||    
T  10142232 attttcaagtaaaatataatttgttttgttatgaaaattatcccaatttattggataataaatatcaccaatatttttaatattagtgaagcacattatt 10142133  T
Q  157 aggagtaaaggg-cccnnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaa 232  Q
    || |  |||||| ||         |||| ||||||||||||||||| |||||  ||| ||||| |||||||||||||    
T  10142132 agaaacaaagggtccaaaaaaatatcatcaatttcttcgataataatttttttggcacattattaagaacaaccaaa 10142056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 1843173 - 1843287
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||| |||||| |||||| ||||||| ||||||||||| |||||||| |||||| ||||||  | ||||||||||||||||||| | ||||||||    
T  1843173 attttcaacaaaaatataatttgttttgttatgaaaattatcccaatttcttagataatgaatatctccaatatttttaatattagtgaggcacattatt 1843272  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  1843273 aggaacaaagggccc 1843287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 42512246 - 42512336
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaag 147  Q
    |||||||||||||||| |||||| ||||||| ||||||||||| ||||| ||||||||||||||||  | |||||||||||||||||||||    
T  42512246 attttcaactaaaatataatttgttttgttatgaaaattatcccaatttattggataataaatatccccaatatttttaatattagtgaag 42512336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 3665478 - 3665565
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtga 145  Q
    ||||||||||||||||||||||| ||||||| ||||||||||  ||||||||| |||||||||||| |||||| |||||||||||||||    
T  3665478 attttcaactaaaatagaatttgttttgttatgaaaattatctcaatttcttgaataataaatatcatcgata-ttttaatattagtga 3665565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 24611366 - 24611430
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatat 121  Q
    ||||||||||||||||||||||| ||||||| ||||||||||  |||||||||||||||||||||    
T  24611366 attttcaactaaaatagaatttgttttgttatgaaaattatctcaatttcttggataataaatat 24611430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 51337731 - 51337645
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagt 143  Q
    |||||||||||||||| |||||| ||||||| ||||||| ||| ||||| ||||||||||||||||    |||||||||||||||||    
T  51337731 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttttggataataaatatcacatatatttttaatattagt 51337645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 28143470 - 28143584
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| || |||| ||| |||||  |||||||||||||||    ||||||||||||||||| |   ||||||||    
T  28143470 attttcaactaaaatataatttgttttgttatgagaattctcccaattttctggataataaatatcacatatatttttaatattagtaagacacattatt 28143569  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  28143570 aggaacaaagggccc 28143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 9900077 - 9900244
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||| | ||  ||| ||||||||||| |||||||| |||  ||||||||  | ||||||||||||| |||||  | ||||| |    
T  9900077 attttcaactaaaatataattcgtttcattatgaaaattatcccaatttcttagatggtaaatatcaccaatatttttaatatcagtgagatgcattaat 9900176  T
Q  157 aggagtaaagggcccnnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaa 224  Q
    ||||  ||||| |||        |||| ||||||||||||||||| ||||| |||| ||||| |||||    
T  9900177 aggaacaaaggacccaaaaaatatcatcaatttcttcgataataatttttttagcacattattaagaa 9900244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 23935836 - 23935903
Alignment:
Q  101 aatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaaggg 168  Q
    ||||||||||||||||||||||  | ||||| ||||||||||||| | |||||||||||| |||||||    
T  23935836 aatttcttggataataaatatcaccaatattattaatattagtgaggcacattattaggaataaaggg 23935903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 24612043 - 24612094
Alignment:
Q  109 ggataataaatatcgtcgatatttttaatattagtgaagtacattattagga 160  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  24612043 ggataataaatatcatcgatatttttaatattagtgagatacattattagga 24612094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 14192338 - 14192452
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||| |||||||||  ||||| ||||||| ||| ||| ||| |||||  |||||||||||||||    ||||||||||||||||| |  |||||||||    
T  14192338 attttctactaaaatattatttgttttgttatgaagattctcccaattttctggataataaatatcacatatatttttaatattagtaagatacattatt 14192437  T
Q  157 aggagtaaagggccc 171  Q
    ||||  |||||||||    
T  14192438 aggaacaaagggccc 14192452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 41509209 - 41509310
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| || ||||  |||||| ||  |||||||||||||||||||||   | |||||||||||||||||||   ||||||||    
T  41509209 attttcaactaaaatataatttgtttagttat-aaaattgtctcaatttcttggataataaatattaccaatatttttaatattagtgagacacattatt 41509307  T
Q  157 agg 159  Q
    |||    
T  41509308 agg 41509310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 29283029 - 29283200
Alignment:
Q  60 ttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattagg 159  Q
    ||||| ||||||| |||||  |||||||  |||||||||  |||||||||||||||||||||   | |||| |||||||||||||| | ||||||||||     
T  29283029 ttcaattaaaatataatttattttgttat-aaaattatctcaatttcttggataataaatattaccaatatatttaatattagtgaggcacattattaga 29283127  T
Q  160 agtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaa 232  Q
    |  |||||||||         |||||||||| ||||||||||| |||||| ||| ||||| ||||| |||||||    
T  29283128 aacaaagggcccaaaataatatcataaatttattcgataataattttttg-gcacattattaagaaaaaccaaa 29283200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 10142649 - 10142609
Alignment:
Q  14 agaaaaatagcacatgtgaagtagactgaaattttagcacc 54  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  10142649 agaacaatagcacatgtgaagtagactgaaattttagcacc 10142609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 10373387 - 10373485
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||| |||  |||||||||  ||||||||| ||||| |||||   | ||||||||||||||||||| | ||||||||    
T  10373387 attttcaactaaaatataatttgttttattat-aaaattatctcaatttcttgtataatgaatatgaccaatatttttaatattagtgagggacattatt 10373485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 28803858 - 28803909
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcacccta 57  Q
    ||||| ||| |||||||||| ||| |||||||||||||||||||||||||||    
T  28803858 agaagtagaaaaaaatagcaaatgcgaagtagactgaaattttagcacccta 28803909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 25201101 - 25201039
Alignment:
Q  55 ctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataa 117  Q
    ||||||| ||||||||||   |||| ||||||| ||||||||||| |||||||||||||||||    
T  25201101 ctatttttaactaaaatatcttttgttttgttatgaaaattatcccaatttcttggataataa 25201039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 21320101 - 21320037
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatc 122  Q
    |||||||||||||||| |||||| |||||||  |||||||||| ||||| |||| |||||||||||    
T  21320101 attttcaactaaaatataatttgttttgtta-taaaattatcctaatttattggttaataaatatc 21320037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 52460681 - 52460632
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccc 55  Q
    ||||| |||||| |||| |||||| |||||||||||||||||||||||||    
T  52460681 agaagtagagaacaataacacatgcgaagtagactgaaattttagcaccc 52460632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 3665154 - 3665193
Alignment:
Q  16 aaaaatagcacatgtgaagtagactgaaattttagcaccc 55  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  3665154 aaaaatagcacatgcgaagtagactaaaattttagcaccc 3665193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 51890445 - 51890508
Alignment:
Q  55 ctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaa 118  Q
    |||||||||||||||||| |||||  ||||||| |||||| || | ||||| ||||||||||||    
T  51890445 ctattttcaactaaaatataatttattttgttatgaaaatgattccaatttattggataataaa 51890508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 51890719 - 51890782
Alignment:
Q  55 ctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaa 118  Q
    |||||||||||||||||| |||||  ||||||| |||||| || | ||||| ||||||||||||    
T  51890719 ctattttcaactaaaatataatttattttgttatgaaaatgattccaatttattggataataaa 51890782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 52459418 - 52459375
Alignment:
Q  12 agagaaaaatagcacatgtgaagtagactgaaattttagcaccc 55  Q
    |||||| |||| |||||| |||||||||||||||||||||||||    
T  52459418 agagaacaataacacatgcgaagtagactgaaattttagcaccc 52459375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 31915608 - 31915559
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcaccc 55  Q
    ||||| ||| || |||||||||||  ||||||||||||||||||||||||    
T  31915608 agaagtagacaacaatagcacatgataagtagactgaaattttagcaccc 31915559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 322
Target Start/End: Original strand, 9922054 - 9922130
Alignment:
Q  247 ggtgtatatagaaatatttgtgttgcatg-ggatatatatagcaaatctcactaaaaaggccaaaaatactaacaga 322  Q
    ||||||||||||||| ||||||||  | | || ||||||||||||| |||||||||| |||| |||| | |||||||    
T  9922054 ggtgtatatagaaatctttgtgttatacgagggtatatatagcaaaactcactaaaagggccgaaaacattaacaga 9922130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 311
Target Start/End: Complemental strand, 51337557 - 51337489
Alignment:
Q  243 ggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaa 311  Q
    ||||||||||||||||||||||||| |   ||||  ||||||||||||||  ||  |||||||||||||    
T  51337557 ggagggtgtatatagaaatatttgtttcatatggagtatatatagcaaattgcatcaaaaaggccaaaa 51337489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 51758413 - 51758369
Alignment:
Q  184 aaatttcttcgataataaatttttgagcatattatcaagaacaac 228  Q
    ||||||||||||||||||||||||  ||| ||||| |||||||||    
T  51758413 aaatttcttcgataataaattttttggcacattattaagaacaac 51758369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 56366890 - 56366954
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatat 121  Q
    ||||||||||||||||   |||| ||||||||||| ||| ||  |||||||| ||||||||||||    
T  56366890 attttcaactaaaatatcgtttgttttgttacgaagattctcacaatttcttagataataaatat 56366954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 155; Significance: 3e-82; HSPs: 5)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 31 - 302
Target Start/End: Original strand, 87622 - 87892
Alignment:
Q  31 gaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatat 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||||||||| ||||||||    
T  87622 gaagtagactgaaattttagcaccccattttcaactaaaatagaatttgcttcgttatgaaaattatctcaatttcttggataataaatattgtcgatat 87721  T
Q  131 ttttaatattagtgaagtacattattaggagtaaagggcccnnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaacca 230  Q
    ||||||||||||||||||||||||||||||  |||||||||        ||| ||||||||||||||||||||||| | ||||||||| |||||||||||    
T  87722 ttttaatattagtgaagtacattattaggaacaaagggcccaaaaaatatcacaaatttcttcgataataaattttcgggcatattattaagaacaacca 87821  T
Q  231 aannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaa 302  Q
    |        |||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||    
T  87822 attttttttataggagggtgtatatagaaat-tttgtgctgcatgtgatatatatagcaaatcgcactaaaa 87892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 31 - 334
Target Start/End: Original strand, 89048 - 89352
Alignment:
Q  31 gaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatat 130  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||    
T  89048 gaagtagactgaaattttagcacccaattttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatat 89147  T
Q  131 ttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaacc 229  Q
    ||||||||||||||||||||||||||||||  |||||||||         ||| ||||||||||||||||||||||| ||||||||||| |||||||| |    
T  89148 ttttaatattagtgaagtacattattaggaacaaagggcccaaaaaaatatcacaaatttcttcgataataaattttcgagcatattattaagaacaatc 89247  T
Q  230 aaannnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatac--taacagatgtca 327  Q
    ||        |||||||||||||||||||||| |||||| |||||| ||||||||||||||||| |||| |||||| |||||| ||  |||||||| |||    
T  89248 aattttttttataggagggtgtatatagaaat-tttgtgctgcatgtgatatatatagcaaatcgcact-aaaaggtcaaaaaaacattaacagatttca 89345  T
Q  328 gcccatt 334  Q
    |||||||    
T  89346 gcccatt 89352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 27 - 334
Target Start/End: Original strand, 88092 - 88401
Alignment:
Q  27 atgtgaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcg 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||    
T  88092 atgtgaagtagactgaaattttagcacccaattttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcg 88191  T
Q  127 atatttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaac 225  Q
    ||||||||||||||||||||||||||||||||||  |||||||||         ||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  88192 atatttttaatattagtgaagtacattattaggaacaaagggcccaaaaaaatatcacaaatttcttcgataataaattttcgagcatattattaagaac 88291  T
Q  226 aaccaa-annnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatac--taacaga 322  Q
    || |||         |||||||||||||||||||||| |||||| |||||| ||||||||||||||||| |||| |||||| |||||| ||  |||||||    
T  88292 aatcaatttttttttataggagggtgtatatagaaat-tttgtgctgcatgtgatatatatagcaaatcgcact-aaaaggtcaaaaaaacattaacaga 88389  T
Q  323 tgtcagcccatt 334  Q
    | ||||||||||    
T  88390 tttcagcccatt 88401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 31 - 334
Target Start/End: Original strand, 88572 - 88877
Alignment:
Q  31 gaagtagactgaaattttagcaccctattttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatat 130  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||    
T  88572 gaagtagactgaaattttagcacccaattttcaactaaaatagaatttgctttgttatgaaaattatctcaatttcttggataataaatattgtcgatat 88671  T
Q  131 ttttaatattagtgaagtacattattaggagtaaagggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaacc 229  Q
    ||||||||||||||||||||||||||||||  |||||||||         ||| ||||||||||||||||||||||| ||||||||||| |||||||| |    
T  88672 ttttaatattagtgaagtacattattaggaacaaagggcccaaaaaaatatcacaaatttcttcgataataaattttcgagcatattattaagaacaatc 88771  T
Q  230 aa-annnnnnnataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatac--taacagatgtc 326  Q
    ||         |||||||||||||||||||||| |||||| |||||| ||||||||||||||||| |||| |||||| |||||| ||  |||||||| ||    
T  88772 aatttttttttataggagggtgtatatagaaat-tttgtgctgcatgtgatatatatagcaaatcgcact-aaaaggtcaaaaaaacattaacagatttc 88869  T
Q  327 agcccatt 334  Q
    ||||||||    
T  88870 agcccatt 88877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 330
Target Start/End: Original strand, 87358 - 87448
Alignment:
Q  240 ataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggc-caaaaatactaacagatgtcagcc 330  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| | |  ||||||| |||||||| ||||||    
T  87358 ataggagggtgtatatagaaat-tttgtgctgcatgggatatatatagcaaatcgcactaaaaggtcaaaaaaatattaacagatttcagcc 87448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 66 - 336
Target Start/End: Complemental strand, 51008 - 50737
Alignment:
Q  66 taaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattattaggagtaaa 165  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||    
T  51008 taaaatagaatttgctttgttacgaaaattatcccaatttcttggataataaatatcgtcgatatttttaatatcaatgaagtacattattaggagcaaa 50909  T
Q  166 gggccc-nnnnnnnntcataaatttcttcgataataaatttttgagcatattatcaagaacaaccaaannnnnnnataggagggtgtatatagaaatatt 264  Q
    || |||         |||  ||||||||| |||||||||||||||||||||||||||||| | |||||       | |||||||||||||||||||  ||    
T  50908 ggacccaaaaaaatatcaccaatttcttcaataataaatttttgagcatattatcaagaaaagccaaatttttttaaaggagggtgtatatagaaaattt 50809  T
Q  265 tgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||| || |||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  50808 tgtgttacaggggatatatataacaaatctcactaaaagagccaataatactaacagatgtcagcccattcc 50737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 336
Target Start/End: Original strand, 12290 - 12386
Alignment:
Q  240 ataggagggtgtatatagaaatatttgtgttgcatgggatatatatagcaaatctcactaaaaaggccaaaaatactaacagatgtcagcccattcc 336  Q
    |||||||||||||| ||||||  |||||||| ||||||||||||||||||||| |||||||||||||||||| || |||||||||||| ||||||||    
T  12290 ataggagggtgtatgtagaaaattttgtgttacatgggatatatatagcaaatatcactaaaaaggccaaaagtattaacagatgtcaacccattcc 12386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 1402 - 1289
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    ||||||||||||||||||||||| ||||||| |||||| |||  ||||| ||||||||||||||||    ||||||||||||||||||| | ||||||||    
T  1402 attttcaactaaaatagaatttgttttgttatgaaaataatctcaatttattggataataaatatcacaaatatttttaatattagtgaggcacattatt 1303  T
Q  157 aggagtaaagggcc 170  Q
    ||||  ||||||||    
T  1302 aggaacaaagggcc 1289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 1713 - 1665
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcacc 54  Q
    ||||| |||||| |||| ||| | |||||||||||||||||||||||||    
T  1713 agaagtagagaacaataacacttatgaagtagactgaaattttagcacc 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 18614 - 18717
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| |||||||  ||||| |||  ||||| ||||||||||||||||  | ||||||||||||||||||| | ||||||||    
T  18614 attttcaactaaaataaaatttgttttgttataaaaataatctcaatttattggataataaatatcaccaatatttttaatattagtgaggcacattatt 18713  T
Q  157 agga 160  Q
    ||||    
T  18714 agga 18717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 18305 - 18353
Alignment:
Q  6 agaagcagagaaaaatagcacatgtgaagtagactgaaattttagcacc 54  Q
    ||||| |||||| |||| ||| | |||||||||||||||||||||||||    
T  18305 agaagtagagaacaataacacttatgaagtagactgaaattttagcacc 18353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 2444 - 2547
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| | ||||||||  ||||| ||| ||||||||||||    ||||||||||||||||||||  ||||||||    
T  2444 attttcaactaaaatataatttgttttgttatgcaaattatctcaatttattgaataataaatatcactaatatttttaatattagtgaaacacattatt 2543  T
Q  157 agga 160  Q
    ||||    
T  2544 agga 2547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 25207 - 25104
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||  |||||| ||||| | ||| ||||||  ||||||||||||||||||||||  | |||||||||||||||||||   ||||||||    
T  25207 attttcaactaaaatttaatttggtttgtcatgaatattatctcaatttcttggataataaatatcaccaatatttttaatattagtgagacacattatt 25108  T
Q  157 agga 160  Q
    ||||    
T  25107 agga 25104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 40905 - 40802
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagtgaagtacattatt 156  Q
    |||||||||||||||| |||||| ||||||| | |||||||   ||||||||||||||||||||||    ||||||||||||||||| | | ||||||||    
T  40905 attttcaactaaaatataatttgttttgttatgtaaattatttcaatttcttggataataaatatcacaaatatttttaatattagttaggcacattatt 40806  T
Q  157 agga 160  Q
    ||||    
T  40805 agga 40802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 3318 - 3404
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataaatatcgtcgatatttttaatattagt 143  Q
    |||||||||||||||| |||||| ||||||| ||||||| ||| ||||| || |||||||||||||    |||||||||||||||||    
T  3318 attttcaactaaaatataatttgttttgttatgaaaattctcccaattttttagataataaatatcacatatatttttaatattagt 3404  T

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Target: scaffold1364 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 933 - 873
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataa 117  Q
    ||||||||||||||||||||||| ||||||| |||||| |||  ||||||| |||||||||    
T  933 attttcaactaaaatagaatttgttttgttatgaaaataatctcaatttctaggataataa 873  T

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Target: scaffold0137 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 21454 - 21544
Alignment:
Q  56 tattttcaactaaaatagaatttgctttgttacgaaaattat-ccaaatttcttggataataaatatcgtcgatatttttaatattagtga 145  Q
    |||||| ||||||||||||||||  ||||||| || |||||| |||| ||| |||||| |||||||||  | | |||||||||||||||||    
T  21454 tatttttaactaaaatagaatttattttgttatgagaattatcccaacttttttggatgataaatatcaccaacatttttaatattagtga 21544  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 98365 - 98425
Alignment:
Q  57 attttcaactaaaatagaatttgctttgttacgaaaattatccaaatttcttggataataa 117  Q
    ||||||||||||||||||||||  ||| ||| |||||| |||  ||||||||| |||||||    
T  98365 attttcaactaaaatagaatttattttattatgaaaataatctcaatttcttgaataataa 98425  T

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