View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9753_low_36 (Length: 267)
Name: NF9753_low_36
Description: NF9753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9753_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 37204357 - 37204116
Alignment:
| Q |
11 |
cagagatactagcagtaacttgattccacgaatggagaccattaaaatgcacttttagagcagagccattaaattagcacaaatgatcgccctctttaaa |
110 |
Q |
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| T |
37204357 |
cagagatactagcagtgacttgattccaccaatgcagaccattaaaatgcacttttagagcagagccattaagttagcacaaatgatcgccctctttaaa |
37204258 |
T |
|
| Q |
111 |
gagtnnnnnnn-taaagttcatatatctaagttggatgcattaacccaacggctataattcttgtatgcttgaacaatgagttgtgaattagactcaatc |
209 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37204257 |
gagtaaaaaaaataaagttcatatatctaagttggatgcattaacccaacggctataattcttgtatgcttgaacaatgagttgtgaattagactcaatc |
37204158 |
T |
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| Q |
210 |
cataaatgcatccatccaatctttctgaaaaaccaattcaat |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
37204157 |
cataaatgcatccatccaatctttctgaaaaaccaattcaat |
37204116 |
T |
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