View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9754_low_16 (Length: 213)

Name: NF9754_low_16
Description: NF9754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9754_low_16
NF9754_low_16
[»] chr7 (59 HSPs)
chr7 (17-191)||(25601921-25602095)
chr7 (17-134)||(3092447-3092562)
chr7 (17-165)||(43393707-43393852)
chr7 (17-101)||(1853163-1853246)
chr7 (34-138)||(27082734-27082836)
chr7 (34-138)||(27195465-27195567)
chr7 (17-106)||(15011857-15011945)
chr7 (17-98)||(2936310-2936391)
chr7 (17-106)||(10931948-10932036)
chr7 (17-166)||(42957580-42957727)
chr7 (56-163)||(1853356-1853462)
chr7 (17-127)||(9689475-9689585)
chr7 (17-163)||(45687812-45687957)
chr7 (17-94)||(15331601-15331677)
chr7 (61-137)||(45687651-45687726)
chr7 (62-165)||(9689221-9689323)
chr7 (17-91)||(2240652-2240725)
chr7 (55-128)||(24812989-24813062)
chr7 (44-101)||(25601795-25601852)
chr7 (17-95)||(32946353-32946430)
chr7 (44-163)||(2936125-2936241)
chr7 (17-94)||(15635155-15635231)
chr7 (25-106)||(22610240-22610321)
chr7 (55-138)||(27082555-27082637)
chr7 (55-138)||(27195664-27195746)
chr7 (17-101)||(27484817-27484900)
chr7 (46-120)||(3092270-3092344)
chr7 (17-80)||(5864676-5864738)
chr7 (17-80)||(12005494-12005556)
chr7 (17-80)||(13263951-13264013)
chr7 (17-80)||(17051898-17051961)
chr7 (17-80)||(20055051-20055113)
chr7 (17-68)||(24233390-24233441)
chr7 (17-80)||(26254788-26254850)
chr7 (17-80)||(31307933-31307995)
chr7 (17-80)||(31749402-31749464)
chr7 (17-80)||(31863941-31864003)
chr7 (17-91)||(2241086-2241159)
chr7 (56-134)||(42957389-42957466)
chr7 (17-98)||(8391027-8391107)
chr7 (17-98)||(24812826-24812907)
chr7 (17-98)||(33441095-33441175)
chr7 (17-78)||(34258337-34258397)
chr7 (17-77)||(17155693-17155752)
chr7 (17-80)||(442617-442679)
chr7 (17-80)||(2300904-2300966)
chr7 (17-80)||(2514143-2514205)
chr7 (17-80)||(3401884-3401946)
chr7 (17-80)||(11576801-11576863)
chr7 (17-80)||(21522000-21522062)
chr7 (17-80)||(38192794-38192856)
chr7 (66-96)||(8490806-8490836)
chr7 (56-106)||(15635345-15635395)
chr7 (74-143)||(19377028-19377097)
chr7 (17-66)||(10975621-10975670)
chr7 (47-119)||(15012018-15012088)
chr7 (23-80)||(21022595-21022651)
chr7 (62-107)||(43393972-43394017)
chr7 (76-120)||(15993742-15993785)
[»] chr1 (35 HSPs)
chr1 (17-159)||(33864054-33864196)
chr1 (17-159)||(33916726-33916868)
chr1 (16-98)||(44078593-44078675)
chr1 (17-138)||(9240491-9240612)
chr1 (56-163)||(22315144-22315252)
chr1 (56-138)||(33864279-33864361)
chr1 (56-138)||(33916561-33916643)
chr1 (17-112)||(44228326-44228420)
chr1 (56-163)||(5469550-5469657)
chr1 (56-115)||(7261545-7261603)
chr1 (17-80)||(13436932-13436994)
chr1 (62-128)||(17890103-17890168)
chr1 (62-137)||(18426747-18426821)
chr1 (17-100)||(24023101-24023184)
chr1 (17-80)||(26190813-26190875)
chr1 (56-138)||(13437075-13437155)
chr1 (66-112)||(39313737-39313783)
chr1 (17-94)||(12126197-12126273)
chr1 (66-122)||(6667367-6667422)
chr1 (42-94)||(17890292-17890343)
chr1 (17-100)||(5469353-5469435)
chr1 (17-80)||(5932044-5932106)
chr1 (17-80)||(9209657-9209719)
chr1 (17-80)||(14909989-14910051)
chr1 (17-80)||(21770837-21770899)
chr1 (17-80)||(25060020-25060082)
chr1 (17-80)||(41189919-41189981)
chr1 (67-110)||(44078767-44078809)
chr1 (17-80)||(47231199-47231261)
chr1 (66-120)||(7261373-7261426)
chr1 (37-98)||(1701171-1701231)
chr1 (45-98)||(9240683-9240736)
chr1 (43-80)||(21853642-21853679)
chr1 (23-80)||(47980001-47980057)
chr1 (76-120)||(48643310-48643354)
[»] chr3 (44 HSPs)
chr3 (17-167)||(25124987-25125134)
chr3 (17-143)||(25158808-25158933)
chr3 (22-171)||(18359427-18359579)
chr3 (44-138)||(5303696-5303789)
chr3 (17-99)||(17030592-17030673)
chr3 (62-143)||(55257660-55257740)
chr3 (17-111)||(2985728-2985820)
chr3 (63-163)||(43426211-43426311)
chr3 (55-109)||(18359284-18359338)
chr3 (17-95)||(31293683-31293760)
chr3 (53-138)||(21113002-21113085)
chr3 (62-138)||(7308272-7308347)
chr3 (17-163)||(7308042-7308185)
chr3 (46-101)||(43426453-43426508)
chr3 (20-138)||(7013356-7013473)
chr3 (17-95)||(28298187-28298265)
chr3 (62-138)||(45008140-45008216)
chr3 (17-80)||(7272642-7272704)
chr3 (17-80)||(13041594-13041656)
chr3 (17-80)||(13049671-13049733)
chr3 (17-80)||(14004495-14004557)
chr3 (17-80)||(19111171-19111233)
chr3 (56-111)||(25159087-25159142)
chr3 (17-80)||(52839530-52839592)
chr3 (17-80)||(52962313-52962375)
chr3 (29-94)||(37050082-37050146)
chr3 (17-80)||(7226151-7226215)
chr3 (62-138)||(17582577-17582651)
chr3 (17-80)||(7060137-7060200)
chr3 (17-80)||(13439795-13439857)
chr3 (45-80)||(16896016-16896051)
chr3 (17-80)||(22817964-22818026)
chr3 (43-78)||(23293494-23293529)
chr3 (66-125)||(23494387-23494445)
chr3 (17-80)||(28735525-28735587)
chr3 (17-80)||(32721738-32721800)
chr3 (37-111)||(17582215-17582287)
chr3 (43-80)||(14154860-14154897)
chr3 (23-80)||(16897325-16897381)
chr3 (17-50)||(34314782-34314815)
chr3 (43-80)||(54571207-54571244)
chr3 (73-120)||(5118770-5118815)
chr3 (17-81)||(31073888-31073951)
chr3 (17-93)||(54571324-54571399)
[»] chr5 (47 HSPs)
chr5 (17-137)||(20355041-20355159)
chr5 (17-120)||(18231990-18232092)
chr5 (17-120)||(42778847-42778949)
chr5 (56-138)||(37869568-37869650)
chr5 (17-91)||(8855469-8855542)
chr5 (56-106)||(21144015-21144065)
chr5 (56-143)||(20355272-20355358)
chr5 (62-163)||(15399610-15399712)
chr5 (17-80)||(31312684-31312746)
chr5 (20-161)||(6527402-6527540)
chr5 (17-98)||(31567697-31567777)
chr5 (57-137)||(21144217-21144297)
chr5 (17-119)||(5818432-5818531)
chr5 (17-80)||(11721348-11721410)
chr5 (17-80)||(12148139-12148201)
chr5 (65-139)||(13153558-13153632)
chr5 (19-78)||(20628154-20628213)
chr5 (17-80)||(30916565-30916627)
chr5 (17-80)||(31920142-31920204)
chr5 (17-80)||(34309541-34309603)
chr5 (17-95)||(7653924-7654002)
chr5 (20-98)||(23108867-23108944)
chr5 (17-95)||(40765451-40765528)
chr5 (23-80)||(4414009-4414065)
chr5 (25-114)||(13153731-13153819)
chr5 (17-65)||(17190784-17190832)
chr5 (55-127)||(41254158-41254230)
chr5 (17-80)||(21039947-21040009)
chr5 (17-80)||(22756295-22756357)
chr5 (17-80)||(25233857-25233919)
chr5 (17-80)||(25298017-25298079)
chr5 (17-80)||(28796429-28796491)
chr5 (17-80)||(35687409-35687471)
chr5 (17-80)||(41123375-41123437)
chr5 (17-83)||(4561834-4561899)
chr5 (66-96)||(7216578-7216608)
chr5 (26-80)||(27330991-27331044)
chr5 (70-116)||(42779079-42779125)
chr5 (56-101)||(6527297-6527342)
chr5 (43-80)||(8855620-8855657)
chr5 (17-66)||(8861437-8861486)
chr5 (17-66)||(23188796-23188845)
chr5 (43-80)||(27331128-27331165)
chr5 (55-125)||(294320-294387)
chr5 (24-80)||(17885941-17885996)
chr5 (66-125)||(25641857-25641914)
chr5 (66-114)||(42537028-42537076)
[»] chr2 (45 HSPs)
chr2 (17-138)||(16590475-16590593)
chr2 (17-163)||(41905989-41906135)
chr2 (17-165)||(35790995-35791140)
chr2 (45-107)||(42223272-42223334)
chr2 (17-98)||(42223089-42223169)
chr2 (17-91)||(29949627-29949700)
chr2 (17-95)||(31377616-31377694)
chr2 (17-94)||(11915086-11915163)
chr2 (17-140)||(11478177-11478293)
chr2 (17-80)||(7008004-7008066)
chr2 (56-143)||(11915246-11915332)
chr2 (17-80)||(15580598-15580661)
chr2 (15-93)||(24217061-24217139)
chr2 (17-95)||(31989421-31989499)
chr2 (17-78)||(19272746-19272806)
chr2 (18-95)||(31396692-31396769)
chr2 (17-80)||(874436-874498)
chr2 (17-80)||(2526434-2526496)
chr2 (17-80)||(9419730-9419792)
chr2 (35-141)||(13315868-13315975)
chr2 (17-80)||(29878910-29878973)
chr2 (17-80)||(36525358-36525420)
chr2 (45-107)||(35791211-35791273)
chr2 (17-80)||(1975713-1975775)
chr2 (17-80)||(7318174-7318236)
chr2 (56-107)||(16590674-16590725)
chr2 (17-80)||(17886646-17886708)
chr2 (17-80)||(18048899-18048961)
chr2 (17-80)||(18756580-18756642)
chr2 (17-80)||(23381242-23381304)
chr2 (17-80)||(26498741-26498803)
chr2 (17-80)||(28781852-28781914)
chr2 (17-80)||(30497233-30497295)
chr2 (17-80)||(38127845-38127907)
chr2 (17-80)||(42794094-42794156)
chr2 (17-80)||(43830733-43830795)
chr2 (56-98)||(11478052-11478094)
chr2 (17-79)||(29883999-29884060)
chr2 (56-106)||(31397486-31397536)
chr2 (23-80)||(19253482-19253538)
chr2 (66-111)||(29098798-29098843)
chr2 (43-80)||(36525531-36525568)
chr2 (23-80)||(39373076-39373132)
chr2 (62-138)||(41906253-41906329)
chr2 (43-91)||(2526605-2526653)
[»] chr4 (51 HSPs)
chr4 (17-163)||(16734081-16734225)
chr4 (17-138)||(9780518-9780638)
chr4 (17-106)||(23091847-23091936)
chr4 (17-137)||(5283628-5283745)
chr4 (62-174)||(8678813-8678925)
chr4 (45-143)||(5283847-5283944)
chr4 (17-127)||(13555852-13555962)
chr4 (17-119)||(49277851-49277956)
chr4 (15-101)||(29700560-29700646)
chr4 (17-138)||(42161239-42161360)
chr4 (62-165)||(13555598-13555700)
chr4 (17-80)||(14121477-14121539)
chr4 (17-80)||(29104242-29104305)
chr4 (62-144)||(8810142-8810224)
chr4 (17-91)||(32682402-32682475)
chr4 (56-172)||(49277655-49277769)
chr4 (56-107)||(9780383-9780434)
chr4 (17-80)||(25244590-25244652)
chr4 (56-138)||(25786191-25786273)
chr4 (17-92)||(29172725-29172800)
chr4 (17-80)||(42056061-42056123)
chr4 (17-78)||(2032646-2032708)
chr4 (36-94)||(37589600-37589658)
chr4 (36-80)||(5114139-5114183)
chr4 (17-80)||(3652353-3652415)
chr4 (17-80)||(30409336-30409398)
chr4 (17-80)||(30919000-30919062)
chr4 (17-80)||(32681928-32681990)
chr4 (17-80)||(39152039-39152101)
chr4 (45-162)||(16734298-16734411)
chr4 (17-67)||(46088142-46088192)
chr4 (17-95)||(49533131-49533208)
chr4 (17-106)||(8809935-8810023)
chr4 (17-98)||(18165120-18165200)
chr4 (17-94)||(21744798-21744875)
chr4 (17-80)||(7913343-7913405)
chr4 (17-80)||(17696295-17696357)
chr4 (17-80)||(18510065-18510127)
chr4 (17-80)||(21507908-21507970)
chr4 (17-80)||(22854046-22854108)
chr4 (17-80)||(49296232-49296294)
chr4 (17-80)||(50773371-50773433)
chr4 (17-80)||(52194395-52194457)
chr4 (26-80)||(26040746-26040800)
chr4 (26-92)||(31031611-31031677)
chr4 (43-80)||(17251501-17251538)
chr4 (56-97)||(21744957-21744998)
chr4 (17-78)||(39133169-39133229)
chr4 (56-152)||(49533290-49533386)
chr4 (36-76)||(16876067-16876107)
chr4 (17-80)||(23184839-23184900)
[»] chr8 (45 HSPs)
chr8 (17-112)||(9235337-9235431)
chr8 (62-163)||(23289114-23289213)
chr8 (17-101)||(27702968-27703051)
chr8 (56-107)||(9235545-9235596)
chr8 (17-80)||(9305637-9305699)
chr8 (56-143)||(13373197-13373282)
chr8 (17-80)||(23245573-23245635)
chr8 (16-98)||(24528805-24528884)
chr8 (17-84)||(28786491-28786558)
chr8 (17-115)||(5600163-5600260)
chr8 (17-115)||(5640360-5640457)
chr8 (17-138)||(14698057-14698177)
chr8 (23-80)||(34227409-34227465)
chr8 (17-80)||(2873531-2873593)
chr8 (17-80)||(24768621-24768683)
chr8 (17-80)||(29346087-29346149)
chr8 (17-80)||(30872626-30872688)
chr8 (17-80)||(32684793-32684855)
chr8 (17-95)||(4944026-4944103)
chr8 (56-106)||(13980034-13980084)
chr8 (17-95)||(23288916-23288993)
chr8 (32-94)||(31343805-31343867)
chr8 (17-78)||(8442148-8442208)
chr8 (53-98)||(24754628-24754673)
chr8 (17-78)||(30221855-30221915)
chr8 (23-80)||(37545128-37545184)
chr8 (53-113)||(5600368-5600427)
chr8 (53-113)||(5640193-5640252)
chr8 (55-95)||(14529693-14529733)
chr8 (17-80)||(5566714-5566776)
chr8 (17-80)||(13572622-13572684)
chr8 (17-80)||(15935617-15935679)
chr8 (17-80)||(23389101-23389163)
chr8 (17-80)||(24331559-24331621)
chr8 (17-80)||(24375877-24375940)
chr8 (17-80)||(38703828-38703890)
chr8 (17-80)||(41509612-41509674)
chr8 (47-101)||(13085256-13085310)
chr8 (62-96)||(38063226-38063260)
chr8 (17-98)||(13174933-13175013)
chr8 (17-98)||(29211934-29212014)
chr8 (17-66)||(31974921-31974970)
chr8 (70-106)||(13373389-13373425)
chr8 (56-119)||(29212137-29212200)
chr8 (75-143)||(29427024-29427091)
[»] chr6 (26 HSPs)
chr6 (17-167)||(33199986-33200134)
chr6 (17-138)||(3816675-3816795)
chr6 (17-137)||(25166878-25166997)
chr6 (17-107)||(20757489-20757579)
chr6 (17-88)||(18274332-18274403)
chr6 (22-91)||(11197723-11197792)
chr6 (17-138)||(9662710-9662831)
chr6 (45-143)||(33198544-33198641)
chr6 (17-80)||(9222558-9222620)
chr6 (17-101)||(854153-854240)
chr6 (17-129)||(9044432-9044544)
chr6 (17-80)||(8237721-8237783)
chr6 (17-76)||(10343584-10343642)
chr6 (17-80)||(13462702-13462764)
chr6 (56-138)||(25167111-25167191)
chr6 (22-94)||(11157271-11157343)
chr6 (17-80)||(3108712-3108774)
chr6 (56-138)||(9044657-9044740)
chr6 (17-80)||(10546093-10546155)
chr6 (17-80)||(12292945-12293007)
chr6 (45-80)||(29942752-29942787)
chr6 (39-109)||(10350149-10350218)
chr6 (23-80)||(32603721-32603776)
chr6 (43-80)||(9222411-9222448)
chr6 (23-80)||(17158350-17158406)
chr6 (56-101)||(20757663-20757707)
[»] scaffold0188 (1 HSPs)
scaffold0188 (62-164)||(13348-13449)
[»] scaffold0004 (2 HSPs)
scaffold0004 (17-138)||(82172-82292)
scaffold0004 (17-80)||(212595-212657)
[»] scaffold0003 (1 HSPs)
scaffold0003 (17-107)||(316488-316576)
[»] scaffold0142 (1 HSPs)
scaffold0142 (17-101)||(34980-35063)
[»] scaffold0154 (1 HSPs)
scaffold0154 (17-80)||(9303-9365)
[»] scaffold0121 (1 HSPs)
scaffold0121 (17-80)||(12550-12612)
[»] scaffold0067 (1 HSPs)
scaffold0067 (56-139)||(25938-26019)
[»] scaffold0002 (1 HSPs)
scaffold0002 (17-80)||(332146-332208)
[»] scaffold0258 (1 HSPs)
scaffold0258 (17-80)||(18831-18893)
[»] scaffold0010 (1 HSPs)
scaffold0010 (17-98)||(145121-145201)
[»] scaffold0110 (1 HSPs)
scaffold0110 (17-93)||(23291-23367)


Alignment Details
Target: chr7 (Bit Score: 128; Significance: 2e-66; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 25601921 - 25602095
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||||||| || || ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  25601921 atatcatcaatattgtacagtcaaaattcatgaatgtttaaaaccgaaaaatcttcaaattacaggattggaatctaaacaattt-tttttacagaaggt 25602019  T
Q  117 aaactgaaaatcgttaatattaaaggg-agcaaacatgaattaaccctataaatttttacgtaaatataaaatcat 191  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25602020 aaactgaaaatcgttaatattaaagggaagcaaacatgaattaaccctataaatttttaagtaaatataaaatcat 25602095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 3092447 - 3092562
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    ||||| |||||||| ||||||||||||| ||||| ||  |||  | |||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  3092447 atatcgtcgattttgtacagtcaaaattaatgaaggtccaaatac-aaaaatcttcaaattacagggttggaatctaaacaa-ttctttttacagggggt 3092544  T
Q  117 aaactgaaaatcgttaat 134  Q
    ||||||||||||| ||||    
T  3092545 aaactgaaaatcgctaat 3092562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 43393852 - 43393707
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    ||||| |||||||| ||| ||||||||||||||| ||  ||||||||||| |||| |||||||||||||||| ||||||||| ||| ||||||||| |||    
T  43393852 atatcgtcgattttgtacggtcaaaattcatgaatgtcaaaaaccaaaaa-tctttaaattacagggttggattctaaacaaattc-ttttacagg-ggt 43393756  T
Q  117 aaactgaaaatcgttaatattaaagggagcaaacatgaattaaccctat 165  Q
    |||||| |||| | |||||||| |||| | ||||||| |||||||||||    
T  43393755 aaactggaaattgctaatattacagggggtaaacatgtattaaccctat 43393707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 1853246 - 1853163
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaattt 101  Q
    |||||||||||||| ||||||||||||||||||| ||  ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1853246 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa-tcttcaaattacagggtgggaatctaaacaattt 1853163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 27082734 - 27082836
Alignment:
Q  34 cagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaa 133  Q
    |||||||||||||| || || |||||||||| |||||||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||| |||    
T  27082734 cagtcaaaattcataaaggtctaaaaccaaataatcttcaaattacagggttggaatctaaataaatt-tttttacagga-gtaaactggaaatcgctaa 27082831  T
Q  134 tatta 138  Q
    |||||    
T  27082832 tatta 27082836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 27195567 - 27195465
Alignment:
Q  34 cagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaa 133  Q
    |||||||||||||| || || |||||||||| |||||||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||| |||    
T  27195567 cagtcaaaattcataaaggtctaaaaccaaataatcttcaaattacagggttggaatctaaataaatt-tttttacagga-gtaaactggaaatcgctaa 27195470  T
Q  134 tatta 138  Q
    |||||    
T  27195469 tatta 27195465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 15011945 - 15011857
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttt 106  Q
    |||||||||||||| ||| ||||||||||||| | ||| ||||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  15011945 atatcatcgattttgtaccgtcaaaattcatgcaggttcaaaaccaaagaatcttcaaattacagggttgaaatctaaac-atttctttt 15011857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 2936310 - 2936391
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    |||||||||||||| ||||||||||||| ||||| ||  ||||||||| ||||||||||||||| ||||| |||||||||||    
T  2936310 atatcatcgattttgtacagtcaaaatttatgaaggtcgaaaaccaaagaatcttcaaattacatggttgaaatctaaacaa 2936391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 10932036 - 10931948
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttt 106  Q
    |||||||||||||| |||| |||||||||||||| ||  ||||||||||  ||||||||||||||||||| |||||||||||||| ||||    
T  10932036 atatcatcgattttgtacaatcaaaattcatgaaggtccaaaaccaaaat-tcttcaaattacagggttgaaatctaaacaatttttttt 10931948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 42957580 - 42957727
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    ||||||| |||||| |||| ||||| |||||||| ||  |||||||||| ||||||||||||||||||| ||||| |||||| || |||||||||| |||    
T  42957580 atatcattgattttgtacaatcaaagttcatgaaggtcgaaaaccaaaa-atcttcaaattacagggttagaatccaaacaaatt-tttttacagggggt 42957677  T
Q  117 aaactgaaaatcgttaatattaaagggagcaaacatgaattaaccctata 166  Q
    |||| | || ||  |||||||| |||| | ||||||  ||||||||||||    
T  42957678 aaaccggaattcactaatattacagggggtaaacatatattaaccctata 42957727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 163
Target Start/End: Original strand, 1853356 - 1853462
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaagggagcaaacatgaa 155  Q
    |||| |||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||||  ||||||  |||||||| |||| | ||||||  |    
T  1853356 aaaatcaaaaaatcttcaaattacaaggttggaatctaaacaaatt-tttttacatgaggtaaaccaaaaatcactaatattacagggggtaaacatata 1853454  T
Q  156 ttaaccct 163  Q
    ||||||||    
T  1853455 ttaaccct 1853462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 9689475 - 9689585
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacag-gagg 115  Q
    |||||||||||||| |||||||| |||||||||| |   ||||||||||| ||||  ||||||||||||| |||||||||||||| |||||||||  |||    
T  9689475 atatcatcgattttgtacagtcataattcatgaaggaccaaaaccaaaaa-tctttgaattacagggttgaaatctaaacaatttttttttacagaaagg 9689573  T
Q  116 taaactgaaaat 127  Q
    ||||| ||||||    
T  9689574 taaaccgaaaat 9689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 45687812 - 45687957
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttaca-ggagg 115  Q
    |||||||||||||| ||| ||||||||||||||| || |||||| ||| ||||||||||||| | ||||| |||||||||||  | ||| |||| ||||     
T  45687812 atatcatcgattttgtacggtcaaaattcatgaaggtctaaaacgaaataatcttcaaattataaggttgaaatctaaacaaact-tttctacagggagt 45687910  T
Q  116 taaactgaaaatcgttaatattaaagggagcaaacatgaattaaccct 163  Q
    ||||  |||||||| |||||||| |||| | ||||||| |||||||||    
T  45687911 taaatcgaaaatcgctaatattagaggg-gtaaacatgtattaaccct 45687957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 15331601 - 15331677
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaa 94  Q
    |||||||||||||| ||| ||||||||||||||| || ||| |||||| ||||||||| |||||||||||||||||||    
T  15331601 atatcatcgattttgtac-gtcaaaattcatgaaggtataacaccaaagaatcttcaagttacagggttggaatctaa 15331677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 45687726 - 45687651
Alignment:
Q  61 caaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatt 137  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| | |||||| |||||||    
T  45687726 caaagaatcttcaaattacagggttggaatct-aacaatttttttttacagaaggtaaaccggaaatcgctaatatt 45687651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 165
Target Start/End: Complemental strand, 9689323 - 9689221
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaagggagcaaacatgaattaacc 161  Q
    ||||||||||||||||||||||||| ||||||| ||| || |||||||||| ||||||| | |||||| |||||||| || | | ||||||  |||||||    
T  9689323 aaaaaatcttcaaattacagggttgaaatctaaccaaattttttttacagg-ggtaaaccggaaatcgctaatattacagagggtaaacatatattaacc 9689225  T
Q  162 ctat 165  Q
    ||||    
T  9689224 ctat 9689221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 2240652 - 2240725
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatc 91  Q
    |||||||||||||| ||| ||||||||||||||| ||  ||||||||||||| |||||||||||||| |||||||    
T  2240652 atatcatcgattttgtaccgtcaaaattcatgaaggtccaaaaccaaaaaat-ttcaaattacagggatggaatc 2240725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 24812989 - 24813062
Alignment:
Q  55 taaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttac-aggaggtaaactgaaaatc 128  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| || ||||||| ||||||||||| |||||||    
T  24812989 taaaaccaaagaatcttcaaattacagggttgaaatctaaacaaatt-tttttacaaggaggtaaaccgaaaatc 24813062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 25601852 - 25601795
Alignment:
Q  44 tcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaattt 101  Q
    ||||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  25601852 tcatgaaggttttaagccaaaaaatcttcaaattacaaggttggaatctaaacaattt 25601795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 32946430 - 32946353
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    |||||||||||||| |||||| |||||||||||| ||  |||||||||||| |||||||||||| ||  ||||||||||    
T  32946430 atatcatcgattttgtacagttaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggacggaatctaaa 32946353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 163
Target Start/End: Complemental strand, 2936241 - 2936125
Alignment:
Q  44 tcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaaggg 143  Q
    ||||||| || |||||||||| ||| ||||||||||| ||||||||||||||||   | ||||||||||   ||||| |||||||| |||||||| |||     
T  2936241 tcatgaaggtctaaaaccaaataattttcaaattacatggttggaatctaaaca---tttttttacagggcataaaccgaaaatcgctaatattacagga 2936145  T
Q  144 agcaaacatgaattaaccct 163  Q
     | ||| ||| |||||||||    
T  2936144 ggtaaatatgtattaaccct 2936125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 15635231 - 15635155
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaa 94  Q
    |||||||| ||||| ||| || |||||||||||| ||  ||||||||||| ||||||||||||||||||||| |||||    
T  15635231 atatcatctattttatacggttaaaattcatgaaggtccaaaaccaaaaa-tcttcaaattacagggttggattctaa 15635155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 22610240 - 22610321
Alignment:
Q  25 gattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttt 106  Q
    |||||| |||||||||||||||| || ||| |||| || | |||||||||||||||  ||||||||||||| ||||| ||||    
T  22610240 gattttgtacagtcaaaattcataaaggttcaaaaacacataatcttcaaattacattgttggaatctaaagaatttttttt 22610321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 27082637 - 27082555
Alignment:
Q  55 taaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaact-gaaaatcgttaatatta 138  Q
    |||||||||| ||||||||| |||||| |||||||||||||||| || || ||||| |||||||||| |||||||| ||||||||    
T  27082637 taaaaccaaagaatcttcaagttacagtgttggaatctaaacaaatt-ttgttaca-gaggtaaactggaaaatcgctaatatta 27082555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 27195664 - 27195746
Alignment:
Q  55 taaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaact-gaaaatcgttaatatta 138  Q
    |||||||||| ||||||||| |||||| |||||||||||||||| || || ||||| |||||||||| |||||||| ||||||||    
T  27195664 taaaaccaaagaatcttcaagttacagtgttggaatctaaacaaatt-ttgttaca-gaggtaaactggaaaatcgctaatatta 27195746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 27484900 - 27484817
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaattt 101  Q
    |||||| | ||||| |||||||||||||||||||  |  |||| | |||||||||||||||||| ||||| ||||||||||||||    
T  27484900 atatcaccaattttgtacagtcaaaattcatgaagatccaaaatc-aaaaatcttcaaattacatggttgaaatctaaacaattt 27484817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 3092344 - 3092270
Alignment:
Q  46 atgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttaca-ggaggtaaac 120  Q
    ||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||| || |||||||| ||||||||||    
T  3092344 atgaaggtttaaaatcaaaaaatctttaaattacaaggttgaaatctaaacaaatt-tttttacaaggaggtaaac 3092270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 5864676 - 5864738
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||    
T  5864676 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 5864738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 12005494 - 12005556
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||||||  |||| |||||||||||||| |||||    
T  12005494 atatcttcgattttgtacagtcaaaattcatgaaagtccaaaa-caaaaaatcttcaagttaca 12005556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 13264013 - 13263951
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  13264013 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 13263951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 17051961 - 17051898
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||| |||||||| |||||||||||    
T  17051961 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaatcaaaaaatattcaaattaca 17051898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 20055051 - 20055113
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| || ||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  20055051 atatcttcaattttgtacagtcaaaattcatgaaagtccaaaacc-aaaaatcttcaaattaca 20055113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 24233441 - 24233390
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaat 68  Q
    |||||||||||||| || |||||||||||||||| || ||||||||||||||    
T  24233441 atatcatcgattttatatagtcaaaattcatgaaggtctaaaaccaaaaaat 24233390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 26254788 - 26254850
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||    
T  26254788 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 26254850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 31307995 - 31307933
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  31307995 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaaattaca 31307933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 31749464 - 31749402
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| || |||||||||||||||| ||  |||||||||||| ||||||||||||    
T  31749464 atatcatcgattttgtatagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 31749402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 31863941 - 31864003
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||| ||||||||| ||  |||||||||||| ||||||||||||    
T  31863941 atatcatcgattttgtacagtcaagattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 31864003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 2241086 - 2241159
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatc 91  Q
    |||| ||||||||| ||| ||||||||||||||| ||  |||||||||||| |||||||||||| || |||||||    
T  2241086 atattatcgattttgtacggtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggatggaatc 2241159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 42957466 - 42957389
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaat 134  Q
    |||| |||||||  |||||||||||||||| ||||||||||||||| |||||| ||| |||||||  ||||||| ||||    
T  42957466 aaaatcaaaaaaaattcaaattacagggttagaatctaaacaattt-tttttatagggggtaaaccaaaaatcgctaat 42957389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 8391107 - 8391027
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    |||||||| ||||| ||||||||||||||||||| ||  |||| | |||||||| ||||||||| || ||||| ||||||||    
T  8391107 atatcatctattttgtacagtcaaaattcatgaaggtccaaaatc-aaaaatctacaaattacaaggatggaaactaaacaa 8391027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 24812907 - 24812826
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    |||||||||||| | | |||||||||||||||||  | |||||| ||| ||| |||||||||||| | || |||||||||||    
T  24812907 atatcatcgattatgtgcagtcaaaattcatgaagatctaaaacaaaagaattttcaaattacagagatgaaatctaaacaa 24812826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 33441095 - 33441175
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    |||||||| ||||| |||| |||||||||||||| ||  |||||| | |||||||||||||||| || ||||| ||||||||    
T  33441095 atatcatctattttgtacaatcaaaattcatgaaggtccaaaacc-agaaatcttcaaattacaaggatggaaactaaacaa 33441175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 34258337 - 34258397
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaatta 78  Q
    |||||||||||||| |||||||||||||||||||  | ||||| ||||||| ||||||||||    
T  34258337 atatcatcgattttgtacagtcaaaattcatgaagatctaaaa-caaaaaaacttcaaatta 34258397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 17155752 - 17155693
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaatt 77  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| ||||||||||||||    
T  17155752 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaatt 17155693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 442679 - 442617
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||| |||||||||||||| |||||    
T  442679 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaagttaca 442617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 2300966 - 2300904
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||||||||||||| ||  |||| | || |||||||||||||||    
T  2300966 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaatc-aagaatcttcaaattaca 2300904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 2514143 - 2514205
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||||||||| ||| ||  |||| | ||||||||||||||||||    
T  2514143 atatcatcgattttgtacagtcaaaattcacgaaggtccaaaatc-aaaaatcttcaaattaca 2514205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 3401946 - 3401884
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||| ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  3401946 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 3401884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 11576801 - 11576863
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||  ||||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  11576801 atatcttcgatttcgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaaattaca 11576863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 21522000 - 21522062
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||| |||||||||||||| |||||    
T  21522000 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaagttaca 21522062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 38192794 - 38192856
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||||| |||||| ||| ||||||||||||||| ||  |||||||||||| ||||||||||||    
T  38192794 atatcattgattttgtactgtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 38192856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 96
Target Start/End: Original strand, 8490806 - 8490836
Alignment:
Q  66 aatcttcaaattacagggttggaatctaaac 96  Q
    |||||||||||||||||||||||||||||||    
T  8490806 aatcttcaaattacagggttggaatctaaac 8490836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 15635345 - 15635395
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttt 106  Q
    |||| ||||| ||||||||||||||| ||||||||||||| ||||| ||||    
T  15635345 aaaatcaaaatatcttcaaattacagagttggaatctaaataatttttttt 15635395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 19377097 - 19377028
Alignment:
Q  74 aattacagggttggaatctaaacaatttcttttt-acaggaggtaaactgaaaatcgttaatattaaaggg 143  Q
    ||||||||||||||||| |||||||||| ||||| ||||| |||||||  ||||||| |||||||| ||||    
T  19377097 aattacagggttggaatttaaacaatttttttttcacagg-ggtaaaccaaaaatcgctaatattacaggg 19377028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 10975670 - 10975621
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaa 66  Q
    |||||||||||||| ||| |||||| |||||||||||  |||||||||||    
T  10975670 atatcatcgattttgtactgtcaaagttcatgaaagtcgaaaaccaaaaa 10975621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 15012018 - 15012088
Alignment:
Q  47 tgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaa 119  Q
    |||| ||| |||| |||| ||||||||||||||||| |||||||||||| || |  |||||||| ||||||||    
T  15012018 tgaatgttcaaaatcaaagaatcttcaaattacaggattggaatctaaataact--tttttacatgaggtaaa 15012088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 21022595 - 21022651
Alignment:
Q  23 tcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||| ||||||||||||||| ||  |||||| ||||||||||||||||||    
T  21022595 tcgattttgtactgtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 21022651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 43393972 - 43394017
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttcttttt 107  Q
    ||||||||||||||||||||||||| ||| |||||| ||| |||||    
T  43393972 aaaaaatcttcaaattacagggttgaaatttaaacagttttttttt 43394017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 15993742 - 15993785
Alignment:
Q  76 ttacagggttggaatctaaacaatttctttttacaggaggtaaac 120  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||    
T  15993742 ttacagggttggaatctaaac-atttttttttacagggggtaaac 15993785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 33864196 - 33864054
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggag-g 115  Q
    |||||||||||||| |||||||||||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |    
T  33864196 atatcatcgattttgtacagtcaaaattcatgaagattcaaaaccaaagaatcttcaaattacagggttggaatctaaacaatttttttttaaaggagtg 33864097  T
Q  116 taaactgaaaatcgttaatattaaagggagcaaacatgaattaa 159  Q
    ||||| |||||||| |||||||| | |||| ||||||| |||||    
T  33864096 taaaccgaaaatcgctaatattaca-ggagtaaacatgtattaa 33864054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 33916726 - 33916868
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggag-g 115  Q
    |||||||||||||| |||||||||||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |    
T  33916726 atatcatcgattttgtacagtcaaaattcatgaagattcaaaaccaaagaatcttcaaattacagggttggaatctaaacaatttttttttaaaggagtg 33916825  T
Q  116 taaactgaaaatcgttaatattaaagggagcaaacatgaattaa 159  Q
    ||||| |||||||| |||||||| | |||| ||||||| |||||    
T  33916826 taaaccgaaaatcgctaatattaca-ggagtaaacatgtattaa 33916868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 44078675 - 44078593
Alignment:
Q  16 aatatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    ||||||||||||||| |||| |||||||||||||| ||| |||||||| | |||||||||||| |||||||||||||||||||    
T  44078675 aatatcatcgattttatacaatcaaaattcatgaaggttgaaaaccaatatatcttcaaattaaagggttggaatctaaacaa 44078593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 9240612 - 9240491
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    ||||||| |||||| |||||||||||||||| || ||  |||| |||| ||||||||||||||||||||  |||||||||||||| |||||  | |||||    
T  9240612 atatcattgattttatacagtcaaaattcataaaggtccaaaatcaaagaatcttcaaattacagggttcaaatctaaacaattttttttttaaagaggt 9240513  T
Q  117 aaactgaaaatcgttaatatta 138  Q
    |||| |||||||  ||||||||    
T  9240512 aaaccgaaaatcactaatatta 9240491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 22315252 - 22315144
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatta-aagggagcaaacatga 154  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||   |||||| |||||||| | ||||| ||||||      
T  22315252 aaaatcaaaaaatcttcaaattacagggttggaatctaaacaatttttttttacagggagtaaaccagaaatcgctaatattacaggggagtaaacatat 22315153  T
Q  155 attaaccct 163  Q
    |||||||||    
T  22315152 attaaccct 22315144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 33864279 - 33864361
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggag-gtaaactgaaaatcgttaatatta 138  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||| ||||||||    
T  33864279 aaaaccaaagaatcttcaaattacagggttggaatctaaacaattt-tttttacaagagagtaaactaaaaatcgctaatatta 33864361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 33916643 - 33916561
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggag-gtaaactgaaaatcgttaatatta 138  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||| ||||||||    
T  33916643 aaaaccaaagaatcttcaaattacagggttggaatctaaacaattt-tttttacaagagagtaaactaaaaatcgctaatatta 33916561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 44228420 - 44228326
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacagg 112  Q
    |||||||| |||||   ||||||||||||||||| ||  ||||||||| |||||| |||||||||||||| ||||||||||| || ||||||||||    
T  44228420 atatcatcaattttgcccagtcaaaattcatgaaggtccaaaaccaaagaatctttaaattacagggttgtaatctaaacaaatt-tttttacagg 44228326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 163
Target Start/End: Original strand, 5469550 - 5469657
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacagg-aggtaaactgaaaatcgttaatattaaagggagcaaacatga 154  Q
    |||| |||||||  ||||||||||| |||||||||||||||||||| |||||||||| | |||||| | |||||| ||||||||||||  | ||||||      
T  5469550 aaaatcaaaaaaaattcaaattacaaggttggaatctaaacaattt-tttttacaggaaagtaaaccggaaatcgctaatattaaaggaggtaaacatat 5469648  T
Q  155 attaaccct 163  Q
    |||||||||    
T  5469649 attaaccct 5469657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 7261545 - 7261603
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggagg 115  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  7261545 aaaaccaaagaatgttcaaattacagggttggaatctaaacaattt-tgtttacaggagg 7261603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 13436994 - 13436932
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| |||| |||||||||||||| || ||||| ||||||||||||||||||||    
T  13436994 atatcatcgattttgtacaatcaaaattcatgaaggtctaaaa-caaaaaatcttcaaattaca 13436932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 17890168 - 17890103
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttac-aggaggtaaactgaaaatc 128  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||| |||| |||||| |||||||    
T  17890168 aaaaaatctttaaattacagggttggaatctaaacaatt--tttttactaggaagtaaaccgaaaatc 17890103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 18426747 - 18426821
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatt 137  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||| |||| |||||  ||||| | |||||||    
T  18426747 aaaaaatcttcaaattacaggattggaatctaaacaaatt-tttttaccggagataaaccaaaaattgctaatatt 18426821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 24023184 - 24023101
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatt 100  Q
    |||||| | ||||| |||| ||||||||||| ||||| ||||||||||| ||| |||||||| | |||| ||||||||| ||||    
T  24023184 atatcagcaattttgtacactcaaaattcataaaagtctaaaaccaaaatatcatcaaattatatggtttgaatctaaagaatt 24023101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 26190875 - 26190813
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  26190875 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 26190813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 13437075 - 13437155
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatta 138  Q
    |||| ||||||||| |||||||||| ||||||||||||||||| || ||||||| |  ||||||| |||||||| ||||||||    
T  13437075 aaaatcaaaaaatcatcaaattacacggttggaatctaaacaaatt-tttttac-gagggtaaaccgaaaatcgctaatatta 13437155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 39313783 - 39313737
Alignment:
Q  66 aatcttcaaattacagggttggaatctaaacaatttctttttacagg 112  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  39313783 aatcttcaaattacagggttgaaatctgaacaatttttttttacagg 39313737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 12126273 - 12126197
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaa 94  Q
    |||||||||||||| |||| ||||||||||||||  |  ||||  |||||||| ||||||||||||||| ||||||||    
T  12126273 atatcatcgattttgtacaatcaaaattcatgaagatccaaaat-aaaaaatcgtcaaattacagggttagaatctaa 12126197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 6667422 - 6667367
Alignment:
Q  66 aatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactg 122  Q
    ||||||||||||||| |||||||||||||||  ||| |||||||||| |||||||||    
T  6667422 aatcttcaaattacaaggttggaatctaaac-ttttttttttacagggggtaaactg 6667367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 17890292 - 17890343
Alignment:
Q  42 attcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaa 94  Q
    ||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||    
T  17890292 attcatgaaggttcaaaactaaaa-atcttcaaattacagggttggaatctaa 17890343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 5469435 - 5469353
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatt 100  Q
    |||||||||||||| ||  ||||||||| |||||  |  ||||| ||||| ||||||||||| | |||||||||||||||||||    
T  5469435 atatcatcgattttgtatggtcaaaattaatgaagatccaaaactaaaaa-tcttcaaattataaggttggaatctaaacaatt 5469353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 5932106 - 5932044
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||| ||||||||||| ||  ||||||| |||||||||||||||||    
T  5932106 atatcttcgattttgtacagtcgaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 5932044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 9209719 - 9209657
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| ||||| |||||||||||    
T  9209719 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatattcaaattaca 9209657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 14909989 - 14910051
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| |||||| |||||||||||| ||  |||| ||||||| ||||||||||||    
T  14909989 atatcatcgattttgtacagttaaaattcatgaaggtccaaaagcaaaaaa-cttcaaattaca 14910051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 21770899 - 21770837
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| |   ||||||| |||||||||||||||||    
T  21770899 atatcttcgattttgtacagtcaaaattcatgaaggcacaaaacca-aaaatcttcaaattaca 21770837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 25060020 - 25060082
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||||| |||||| |||| |||||||||||||| ||| |||| | ||||||||||||||||||    
T  25060020 atatcattgattttgtacaatcaaaattcatgaaggttcaaaa-ctaaaaatcttcaaattaca 25060082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 41189981 - 41189919
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||| |||||||| |||||| || ||||||| | ||||||||||||||||    
T  41189981 atatcatcgattttgtaccgtcaaaatccatgaaggtctaaaacc-ataaatcttcaaattaca 41189919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 44078767 - 44078809
Alignment:
Q  67 atcttcaaattacagggttggaatctaaacaatttctttttaca 110  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  44078767 atcttcaaattacaaggttggaatctaaacaa-ttctttttaca 44078809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 47231261 - 47231199
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||| ||||||||| ||| ||||||||||||||| ||  |||||||||||| ||||||||||||    
T  47231261 atattatcgattttgtacggtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 47231199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 7261426 - 7261373
Alignment:
Q  66 aatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaac 120  Q
    |||||||||||||||||||| |||| |||||||||| ||||||| || |||||||    
T  7261426 aatcttcaaattacagggtttgaatttaaacaattt-tttttaccgggggtaaac 7261373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 1701171 - 1701231
Alignment:
Q  37 tcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    |||||||||||||| ||   |||||||||| |||| |||||||||||||| |||||||||||    
T  1701171 tcaaaattcatgaaggtcctaaaccaaaaa-tctttaaattacagggttgaaatctaaacaa 1701231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 9240683 - 9240736
Alignment:
Q  45 catgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    |||||| |||||||||  || ||||||||| |||||||||| ||||||||||||    
T  9240683 catgaaggtttaaaactgaagaatcttcaagttacagggtttgaatctaaacaa 9240736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 21853679 - 21853642
Alignment:
Q  43 ttcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| || ||||||||||||||||||||||||||    
T  21853679 ttcatgaaggtctaaaaccaaaaaatcttcaaattaca 21853642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 47980001 - 47980057
Alignment:
Q  23 tcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||| ||||||||| |||||  |||||||| |||||||||||||||||||    
T  47980001 tcgattttgtacggtcaaaatttatgaagatttaaaac-aaaaaatcttcaaattaca 47980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 48643310 - 48643354
Alignment:
Q  76 ttacagggttggaatctaaacaatttctttttacaggaggtaaac 120  Q
    |||||||||||||||||||||  ||| |||||||||| |||||||    
T  48643310 ttacagggttggaatctaaactttttttttttacagggggtaaac 48643354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 2e-32; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 25124987 - 25125134
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||| |||||||||||||||| |||| || |||||||||||||| ||||||||||||||    
T  25124987 atatcatcgattttgtacagtcaaaattcatgaaggtcaaaaacc-aaaaatcttcaaattatagggatgaaatctaaacaattt-tttttacaggaggt 25125084  T
Q  117 aaactgaaaatcgttaatattaaagggagcaaacatgaattaaccctataa 167  Q
    |||  |||||||| |||||||| |||| | ||||||| ||||| |||||||    
T  25125085 aaatcgaaaatcgctaatattacaggg-gtaaacatgtattaatcctataa 25125134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 25158933 - 25158808
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggagg- 115  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||| || | |||||||||||||||||||||||||||||||| |||||||||||||     
T  25158933 atatcatcgattttgtacagtcaaaattcatgaatgtccaaaaccaagaa-tattcaaattacagggttggaatctaaacaattt-tttttacaggagga 25158836  T
Q  116 taaactgaaaatcgttaatattaaaggg 143  Q
    |||||  ||||||| |||||||| ||||    
T  25158835 taaaccaaaaatcgctaatattacaggg 25158808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 18359427 - 18359579
Alignment:
Q  22 atcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa---tttctttttac-aggaggta 117  Q
    ||||||||||||||||||||||||||||| || |||| ||||| |||||| |||||||| ||||| |||||||||||   ||| ||||||| |||  |||    
T  18359427 atcgattttttacagtcaaaattcatgaaggtctaaatccaaagaatctttaaattacaaggttgaaatctaaacaaatttttttttttacaagggagta 18359526  T
Q  118 aactgaaaatcgttaatattaaagggagcaaacatgaattaaccctataaattt 171  Q
    ||| |||| ||| |||||||| |||| | ||||||| ||||||| || ||||||    
T  18359527 aaccgaaagtcgctaatattacaggg-gtaaacatgtattaaccttaaaaattt 18359579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 5303696 - 5303789
Alignment:
Q  44 tcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatta 138  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||  |||||| |||||||  ||||||||    
T  5303696 tcatgaaggtctaaaaccaaagaatcttcaaattacagggttggaatctaaacaaatt-tttttacagggtgtaaaccgaaaatcactaatatta 5303789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 17030673 - 17030592
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaat 99  Q
    ||||||| |||||| ||||||||||||||||||| ||  ||||||||||| ||||||||||||| ||||||||||||||||||    
T  17030673 atatcattgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaa-tcttcaaattacaaggttggaatctaaacaat 17030592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 55257740 - 55257660
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaaggg 143  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| | |||||| |||||||| ||||    
T  55257740 aaaaaatcttcaaattatagggttggaatctaaacaattt-tttttacagggggtaaaccggaaatcgctaatattacaggg 55257660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 2985728 - 2985820
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacag 111  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||| ||  |||||| ||| ||||| |||||||||    
T  2985728 atatcatcgattttgtacagtcaaaattcatgaaggtctaaaaccaaaaaa-cttcaaattacaaggacggaatccaaa-aatttttttttacag 2985820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 43426311 - 43426211
Alignment:
Q  63 aaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaagggagcaaacatgaattaaccc 162  Q
    |||||||||||||||||||||||||||| ||||  | || ||||||| || ||||||| |||||||  |||||||| |||| | ||||||| ||||||||    
T  43426311 aaaaatcttcaaattacagggttggaatataaaataattttttttactgggggtaaaccgaaaatcactaatattacagggggtaaacatgtattaaccc 43426212  T
Q  163 t 163  Q
    |    
T  43426211 t 43426211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 18359338 - 18359284
Alignment:
Q  55 taaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttac 109  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  18359338 taaaactaaagaatcttcaaattacagggttggaatctaaacaatttttttttac 18359284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 31293683 - 31293760
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||||||| |||||||||||| ||  ||||||||||    
T  31293683 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggacggaatctaaa 31293760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 21113002 - 21113085
Alignment:
Q  53 tttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatta 138  Q
    |||||||||||| ||||||||||||| |||||| ||||||||||||  | ||||||||||| | |||| |||||||||||||||||    
T  21113002 tttaaaaccaaagaatcttcaaattatagggttagaatctaaacaa-atgtttttacagga-gcaaaccgaaaatcgttaatatta 21113085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 7308272 - 7308347
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatta 138  Q
    ||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||   |||||| ||||||||    
T  7308272 aaaaaatcttcaaattatagggttggaatctgaacaattt-tttttacagggggtaaaccagaaatcgctaatatta 7308347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 7308185 - 7308042
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    ||||||| |||||| ||| ||||||||||||||| ||  ||||||  |||||||||||| | |||||||||||| ||||||| || ||||||| || |||    
T  7308185 atatcattgattttgtactgtcaaaattcatgaaggtccaaaacc--aaaatcttcaaacttcagggttggaatttaaacaaatt-tttttacggggggt 7308089  T
Q  117 aaactgaaaatcgttaatattaaagggagcaaacatgaattaaccct 163  Q
    |||| | || ||  |||||||| |||| | ||||||  |||||||||    
T  7308088 aaaccggaattcactaatattacagggggtaaacatatattaaccct 7308042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 43426453 - 43426508
Alignment:
Q  46 atgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaattt 101  Q
    ||||| || ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  43426453 atgaaggtctaaaatcaaaaaatcttcaaattacagggttcgaatctaaacaattt 43426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 7013356 - 7013473
Alignment:
Q  20 tcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaa 119  Q
    |||||||||||  ||| |||||||| |||||  |  ||||||||| ||||||||||||||||  ||| ||| ||||||| || |||| ||||| ||||||    
T  7013356 tcatcgattttgcacaatcaaaatttatgaagatccaaaaccaaagaatcttcaaattacagaattgaaatttaaacaa-ttattttcacagggggtaaa 7013454  T
Q  120 ctgaaaatcgttaatatta 138  Q
    |||||||||  ||||||||    
T  7013455 ctgaaaatcactaatatta 7013473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 28298187 - 28298265
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    |||||||||||||| |||||||||||||||||||  | |||||| ||| |||| |||||||||| || || ||||||||    
T  28298187 atatcatcgattttgtacagtcaaaattcatgaagatctaaaactaaataatcatcaaattacaaggatgaaatctaaa 28298265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 45008140 - 45008216
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatta 138  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||| ||  |||||||   |||||| ||||||||    
T  45008140 aaaaaatcttcaaattacagagttagaatctaaacaatttttttttaaagagggtaaaccagaaatcgctaatatta 45008216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 7272704 - 7272642
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| |||||||| ||||||||||  | ||||||||||||| ||||||||||||    
T  7272704 atatcatcgattttgtacagtcacaattcatgaagatctaaaaccaaaaaa-cttcaaattaca 7272642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 13041594 - 13041656
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||    
T  13041594 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 13041656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 13049671 - 13049733
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||    
T  13049671 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 13049733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 14004495 - 14004557
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||| ||||||||||||||||||| |||||| |||||| |||||||||||    
T  14004495 atatcttcgattttgtactgtcaaaattcatgaaagttcaaaacc-aaaaattttcaaattaca 14004557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 19111171 - 19111233
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||    
T  19111171 atatcttcgattttatacagtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 19111233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 25159087 - 25159142
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacag 111  Q
    |||| |||||||| ||||||||||| |||| ||||||||||||||| |||||||||    
T  25159087 aaaatcaaaaaatattcaaattacaaggttagaatctaaacaatttttttttacag 25159142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 52839530 - 52839592
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||    
T  52839530 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 52839592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 52962375 - 52962313
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||||||||| |||||||||||    
T  52962375 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaat-ttcaaattaca 52962313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 37050146 - 37050082
Alignment:
Q  29 ttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaa 94  Q
    ||||| |||||||||||||||| || |||||  ||||||||||||||||||| || ||||||||||    
T  37050146 ttttatagtcaaaattcatgaaggtctaaaat-aaaaaatcttcaaattacaaggatggaatctaa 37050082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 7226215 - 7226151
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaa-aaaatcttcaaattaca 80  Q
    |||||||||||||| |||| |||||||||||||| ||  |||||||| |||| ||||||||||||    
T  7226215 atatcatcgattttgtacattcaaaattcatgaaggtccaaaaccaaaaaaaacttcaaattaca 7226151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 17582577 - 17582651
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatta 138  Q
    ||||||||||||||||||| |||| |||| ||||||| || |||||||| ||| ||||| |||||||| ||||||||    
T  17582577 aaaaaatcttcaaattacaaggtttgaatttaaacaaatt-tttttaca-gagctaaaccgaaaatcgctaatatta 17582651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 7060200 - 7060137
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||| |||| |||||||||||| | |||||||| ||||| ||||| ||||||||    
T  7060200 atatcatctattttatacaatcaaaattcatgtaggtttaaaatcaaaatatctttaaattaca 7060137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 13439795 - 13439857
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| |||| |||||||||||||| ||  |||||| ||||||||||||||||||    
T  13439795 atatcttcgattttgtacaatcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 13439857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 16896051 - 16896016
Alignment:
Q  45 catgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||| |||||||||||||||||||||||||    
T  16896051 catgaaagttcaaaaccaaaaaatcttcaaattaca 16896016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 22818026 - 22817964
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| || |||||||||||||||| ||  ||||||| |||||||||||||||||    
T  22818026 atatcttcgattttgtatagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 22817964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 78
Target Start/End: Complemental strand, 23293529 - 23293494
Alignment:
Q  43 ttcatgaaagtttaaaaccaaaaaatcttcaaatta 78  Q
    ||||||||||| ||||||||||||||||||||||||    
T  23293529 ttcatgaaagtctaaaaccaaaaaatcttcaaatta 23293494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 23494445 - 23494387
Alignment:
Q  66 aatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaa 125  Q
    |||||||| |||| |||||||||||||||||  ||| |||||||||||||||||| ||||    
T  23494445 aatcttcatattaaagggttggaatctaaac-ttttatttttacaggaggtaaaccgaaa 23494387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 28735587 - 28735525
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||| ||||||||||||| ||  ||||||| |||||||||||||||||    
T  28735587 atatcttcgattttgtacagccaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 28735525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 32721738 - 32721800
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||| |||||||||||||| |||||    
T  32721738 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaagttaca 32721800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 17582287 - 17582215
Alignment:
Q  37 tcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacag 111  Q
    |||||||||||||| ||| ||||| ||||| |||| |||||||||||||||||| | ||||| || |||||||||    
T  17582287 tcaaaattcatgaaggttcaaaacgaaaaa-tctttaaattacagggttggaatttgaacaaatt-tttttacag 17582215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 14154897 - 14154860
Alignment:
Q  43 ttcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| || ||||||||||||||||||||||||||    
T  14154897 ttcatgaaggtctaaaaccaaaaaatcttcaaattaca 14154860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 16897325 - 16897381
Alignment:
Q  23 tcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| |||||||||||||||| |||| | |||| | ||||||||||||||||||    
T  16897325 tcgattttgtacagtcaaaattcat-aaaggtcaaaaaccaaaaatcttcaaattaca 16897381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 34314815 - 34314782
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaa 50  Q
    |||||||||||||| |||||||||||||||||||    
T  34314815 atatcatcgattttgtacagtcaaaattcatgaa 34314782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 54571244 - 54571207
Alignment:
Q  43 ttcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| || ||||||||||||||||||||||||||    
T  54571244 ttcatgaaggtctaaaaccaaaaaatcttcaaattaca 54571207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 5118770 - 5118815
Alignment:
Q  73 aaattacagggttggaatctaaacaatttctttttacaggaggtaaac 120  Q
    ||||||||||||||||||||||||  ||| |||||||||| |||||||    
T  5118770 aaattacagggttggaatctaaac--tttttttttacagggggtaaac 5118815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 31073888 - 31073951
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacag 81  Q
    ||||| || ||||| |||| |||||||||||||| ||  |||||| |||||||||||||||||||    
T  31073888 atatcttcaattttgtacattcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattacag 31073951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 54571324 - 54571399
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatcta 93  Q
    |||||||||||| | ||||||||||||| ||||| ||| |||| ||||||| ||||||| |||| || || ||||||    
T  54571324 atatcatcgattctgtacagtcaaaatttatgaaggttcaaaa-caaaaaaacttcaaactacaaggatgaaatcta 54571399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 20355159 - 20355041
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||||| |||| |||| ||||||||| |||||||||| |||    
T  20355159 atatcatcgattttgtacagtcaaaattcatgaaggttcaaaacca-aaaatcttcaaattacagtgttgaaatcaaaacaatttttttttacagg-ggt 20355062  T
Q  117 aaactgaaaatcgttaatatt 137  Q
    |||||| |||||| |||||||    
T  20355061 aaactggaaatcgctaatatt 20355041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 18231990 - 18232092
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||| ||||||||| || |||||||||||||||| ||| ||||||||| |||||| |||||||||||||||||| ||||||| ||  ||||||||| |||    
T  18231990 atattatcgattttgtagagtcaaaattcatgaaggttcaaaaccaaagaatctttaaattacagggttggaatataaacaaatt-attttacagggggt 18232088  T
Q  117 aaac 120  Q
    ||||    
T  18232089 aaac 18232092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 42778949 - 42778847
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    ||||||| |||||| ||||| ||||||||||||| |||||||||| |||  |||||||||||||| |||||||||||||||  || |||||||||| |||    
T  42778949 atatcattgattttgtacagccaaaattcatgaaggtttaaaaccgaaat-tcttcaaattacagagttggaatctaaacacattttttttacagggggt 42778851  T
Q  117 aaac 120  Q
    ||||    
T  42778850 aaac 42778847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 37869568 - 37869650
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaa-tctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatta 138  Q
    |||| |||| ||||||||||||||| |||||||| |||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  37869568 aaaatcaaagaatcttcaaattacaaggttggaaatctaaacaattt-tttttacaggagataaaccgaaaatcgttaatatta 37869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 8855542 - 8855469
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatc 91  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||||||| |||||||||||| || |||||||    
T  8855542 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggatggaatc 8855469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 21144065 - 21144015
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttt 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  21144065 aaaatcaaaaaatcttcaaattacagggttggaatctaaacaatttttttt 21144015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 20355272 - 20355358
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacagg-aggtaaactgaaaatcgttaatattaaaggg 143  Q
    |||| |||||||||||||||||||||| |||||||||||||||||  ||||||| || |||||||| |||||||  |||||||| ||||    
T  20355272 aaaatcaaaaaatcttcaaattacaggattggaatctaaacaatt--tttttaccggaaggtaaaccgaaaatcactaatattagaggg 20355358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 15399712 - 15399610
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttaca-ggaggtaaactgaaaatcgttaatattaaagg-gagcaaacatgaattaa 159  Q
    |||||||||||||||||||||||||| |||||||||| || |||||||| ||||||||||   |||||| |||||||| ||| ||| ||||||  |||||    
T  15399712 aaaaaatcttcaaattacagggttgggatctaaacaaatt-tttttacatggaggtaaaccagaaatcgctaatattacaggagagtaaacatatattaa 15399614  T
Q  160 ccct 163  Q
    ||||    
T  15399613 ccct 15399610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 31312684 - 31312746
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||    
T  31312684 atatcttcgattttgtacagtcaaaattcatgaaggtctaaaacc-aaaaatcttcaaattaca 31312746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 6527402 - 6527540
Alignment:
Q  20 tcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaa 119  Q
    ||||||||||| ||||||||||||| ||||| ||  |||| |||| || |||||||||| || |||||||| |||||| ||  |||||||||   |||||    
T  6527402 tcatcgattttgtacagtcaaaatttatgaaggtccaaaatcaaataaccttcaaattatagagttggaatttaaacagtt--tttttacagagagtaaa 6527499  T
Q  120 ctgaaaatcgttaatattaaagggagcaaacatgaattaacc 161  Q
    | || ||||| |||||||| |||| | ||||||| |||||||    
T  6527500 ccgataatcgctaatattataggg-gtaaacatgtattaacc 6527540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 31567777 - 31567697
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    ||||||| |||||| |||||||||||||| |||| ||  ||||||| ||||||||||||||||| || || |||||||||||    
T  31567777 atatcattgattttgtacagtcaaaattcttgaaggtccaaaacca-aaaatcttcaaattacaaggatgaaatctaaacaa 31567697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 21144217 - 21144297
Alignment:
Q  57 aaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatt 137  Q
    ||||| |||||||||||||||||| ||||||||||||||||| || ||||   ||| ||||||| | |||||| |||||||    
T  21144217 aaacctaaaaatcttcaaattacaaggttggaatctaaacaaatttttttataagggggtaaaccggaaatcgctaatatt 21144297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 5818531 - 5818432
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||||||||||||| || ||||||||| |||||| ||  ||||| |||||||||||||| ||||  |||||||||||||  |||  |||||||||| |||    
T  5818531 atatcatcgattttgtagagtcaaaat-catgaaggtccaaaactaaaaaatcttcaaactacatagttggaatctaaattatt--tttttacagggggt 5818435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 11721410 - 11721348
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  11721410 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 11721348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 12148139 - 12148201
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  12148139 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaaattaca 12148201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 13153632 - 13153558
Alignment:
Q  65 aaatcttcaaattacagggttggaatctaaacaatttctttttacag-gaggtaaactgaaaatcgttaatattaa 139  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||| || |||||| | |||||| |||||||||    
T  13153632 aaatcttcaaattacaaggttggaatctaaacaaatt-tttttacagagatgtaaaccggaaatcgctaatattaa 13153558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 20628154 - 20628213
Alignment:
Q  19 atcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaatta 78  Q
    |||||||||||| |||  |||||||||||||| ||| ||||||||| |||||||||||||    
T  20628154 atcatcgattttgtactatcaaaattcatgaatgttcaaaaccaaataatcttcaaatta 20628213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 30916627 - 30916565
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| |||| |||||||||||||| || |||||||| |||||||||||||||||    
T  30916627 atatcttcgattttgtacaatcaaaattcatgaaggtataaaacca-aaaatcttcaaattaca 30916565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 31920204 - 31920142
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||| ||||||||| ||||||||||||||||||| ||  |||||||||||| ||||||||||||    
T  31920204 atattatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 31920142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 34309541 - 34309603
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||||||||||||| ||  ||||| |||||| ||||||||||||    
T  34309541 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaactaaaaaa-cttcaaattaca 34309603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 7654002 - 7653924
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    |||||||||||||| |||| ||||||| ||| ||||| ||||| |||| ||||||| |||||||| |||  ||||||||    
T  7654002 atatcatcgattttgtacaatcaaaatacataaaagtctaaaatcaaataatcttcgaattacagagtttaaatctaaa 7653924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 23108867 - 23108944
Alignment:
Q  20 tcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    ||||| ||||| ||||||||||||||||||| || ||||||| | ||||||||||||||||  | ||||| ||||||||    
T  23108867 tcatctattttgtacagtcaaaattcatgaaggtctaaaacc-ataaatcttcaaattacaatgatggaaactaaacaa 23108944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 40765528 - 40765451
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    ||||||||||||||  ||| |||||||||||||| ||  |||||||||||| |||||||||||| ||  ||||||||||    
T  40765528 atatcatcgattttgaacaatcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggacggaatctaaa 40765451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 4414065 - 4414009
Alignment:
Q  23 tcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  4414065 tcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 4414009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 13153731 - 13153819
Alignment:
Q  25 gattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggag 114  Q
    |||||| ||||||||||||||||||| ||  |||||| |||||||||||| |||  || ||| |||||||| || || ||||||||||||    
T  13153731 gattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatcttcaacttattggattgaaatctaaaaaacttttttttacaggag 13153819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 17190832 - 17190784
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaa 65  Q
    |||||||||||||| ||||||||||||||||||| || ||| |||||||    
T  17190832 atatcatcgattttgtacagtcaaaattcatgaaggtctaacaccaaaa 17190784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 41254230 - 41254158
Alignment:
Q  55 taaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaat 127  Q
    |||||||||||||||||||||||||| || ||||||| ||| || |   |||||||||||| ||||| |||||    
T  41254230 taaaaccaaaaaatcttcaaattacaaggatggaatccaaaaaaatatattttacaggaggaaaactaaaaat 41254158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 21040009 - 21039947
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||| |||||||| |||||||||||    
T  21040009 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatattcaaattaca 21039947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 22756295 - 22756357
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| |||| |||||||||||||| ||  |||||| ||||||||||||||||||    
T  22756295 atatcttcgattttgtacaatcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 22756357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 25233857 - 25233919
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||| ||||||||||||||| ||  |||||| ||||||||||||||||||    
T  25233857 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 25233919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 25298017 - 25298079
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||| ||||||||||||||| ||  |||||| ||||||||||||||||||    
T  25298017 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 25298079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 28796491 - 28796429
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||  ||||||||||||||| ||| ||||||| |||||||||||||||||    
T  28796491 atatcttcgattttatatggtcaaaattcatgaaggttcaaaacca-aaaatcttcaaattaca 28796429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 35687409 - 35687471
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||| ||||||||| ||||||||  |||| | ||||||||||||||||||    
T  35687409 atatcatcgattttgtaccgtcaaaatttatgaaagtccaaaatc-aaaaatcttcaaattaca 35687471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 41123375 - 41123437
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||| ||||||||||| ||  |||||| ||||||||||||||||||    
T  41123375 atatcttcgattttgtacagtcgaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 41123437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 4561834 - 4561899
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacaggg 83  Q
    ||||| |||||||| ||||| |||||||||||||  |  |||||| |||||||||||||||||||||    
T  4561834 atatcttcgattttgtacagccaaaattcatgaagatccaaaacc-aaaaatcttcaaattacaggg 4561899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 96
Target Start/End: Original strand, 7216578 - 7216608
Alignment:
Q  66 aatcttcaaattacagggttggaatctaaac 96  Q
    |||||||||||||||||||||||||||||||    
T  7216578 aatcttcaaattacagggttggaatctaaac 7216608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 27331044 - 27330991
Alignment:
Q  26 attttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||||||||||| || || ||||||||||||| ||||||||||||    
T  27331044 attttgtacagtcaaaattcataaaggtctaaaaccaaaaaa-cttcaaattaca 27330991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 42779079 - 42779125
Alignment:
Q  70 ttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    ||||||| ||||||||||||||||||||| || |||||||| |||||    
T  42779079 ttcaaataacagggttggaatctaaacaacttttttttacatgaggt 42779125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 6527342 - 6527297
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaattt 101  Q
    ||||||||| ||||||||||| |||||||| || ||||||||||||    
T  6527342 aaaaccaaataatcttcaaatcacagggtttgagtctaaacaattt 6527297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 8855620 - 8855657
Alignment:
Q  43 ttcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| || ||||||||||||||||||||||||||    
T  8855620 ttcatgaaggtgtaaaaccaaaaaatcttcaaattaca 8855657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 8861437 - 8861486
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaa 66  Q
    ||||| |||||||| ||||||||||||||||||| || ||||| ||||||    
T  8861437 atatcttcgattttgtacagtcaaaattcatgaaggtctaaaatcaaaaa 8861486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 23188796 - 23188845
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaa 66  Q
    ||||| |||||||| ||| ||||||||||||||| || ||||||||||||    
T  23188796 atatcttcgattttgtactgtcaaaattcatgaaggtctaaaaccaaaaa 23188845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 27331128 - 27331165
Alignment:
Q  43 ttcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| || ||||||||||||||||||||||||||    
T  27331128 ttcatgaaggtctaaaaccaaaaaatcttcaaattaca 27331165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 294320 - 294387
Alignment:
Q  55 taaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaa 125  Q
    |||||| ||| |||||||||||||||||||||  ||||||||   || |||||||||| ||||||| ||||    
T  294320 taaaacgaaagaatcttcaaattacagggttgagatctaaac---ttttttttacagggggtaaaccgaaa 294387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 17885941 - 17885996
Alignment:
Q  24 cgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||||| ||| ||||||||||||||||||  |||||| |||| |||||||||||||    
T  17885941 cgattttgtactgtcaaaattcatgaaagtccaaaacc-aaaattcttcaaattaca 17885996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 25641914 - 25641857
Alignment:
Q  66 aatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaa 125  Q
    |||||||| |||| |||||||||||||||||  ||| |||||||||| ||||||| ||||    
T  25641914 aatcttcatattatagggttggaatctaaac--tttttttttacagggggtaaaccgaaa 25641857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 42537028 - 42537076
Alignment:
Q  66 aatcttcaaattacagggttggaatctaaacaatttctttttacaggag 114  Q
    |||||||| |||| |||||||||||||||||  ||| ||||||||||||    
T  42537028 aatcttcatattatagggttggaatctaaactttttttttttacaggag 42537076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 16590593 - 16590475
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||||||||||||| |||| |||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||    
T  16590593 atatcatcgattttgtacaatcaaaattcatgaaggtgcaaaaccaaaaaatcttcaaattacagagttggaatctaaacaat---tttttacaggaggt 16590497  T
Q  117 aaactgaaaatcgttaatatta 138  Q
    |||| ||| |||| || |||||    
T  16590496 aaaccgaatatcgctactatta 16590475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 41906135 - 41905989
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggagg- 115  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||||| | ||||||||||||||||||||| ||||||||| || |||||| ||| ||     
T  41906135 atatcgtcgattttgtacagtcaaaattcatgaaggtcgaaaaccaaata-tcttcaaattacagggttggattctaaacaaattttttttaaaggggga 41906037  T
Q  116 taaactgaaaatcgttaatattaaagggagcaaacatgaattaaccct 163  Q
    |||||||||||||| |||||||| |||| | ||||||| |||||||||    
T  41906036 taaactgaaaatcgctaatattacagggggtaaacatgtattaaccct 41905989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 35791140 - 35790995
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||||||||||||| ||||||||||||||||||| ||  |||| || | ||| ||||||||||||||||||||||||||||||||  ||||||||| |||    
T  35791140 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaacagagaatattcaaattacagggttggaatctaaacaattt-attttacagg-ggt 35791043  T
Q  117 aaactgaaaatcgttaatattaaagggagcaaacatgaattaaccctat 165  Q
    ||||   |||||| |||||||| |||| | ||| ||| |||||||||||    
T  35791042 aaacaagaaatcgctaatattacaggg-gtaaagatgtattaaccctat 35790995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 42223272 - 42223334
Alignment:
Q  45 catgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttcttttt 107  Q
    |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  42223272 catgaaggttcaaaatcaaaaaatcttcaaattacagggttggaatctaaacaattttttttt 42223334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 42223169 - 42223089
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    |||||||||||||| |||||||||||||||||||  |  |||||| |||| ||||||||||||||||||| |||||||||||    
T  42223169 atatcatcgattttgtacagtcaaaattcatgaagatccaaaacc-aaaattcttcaaattacagggttgaaatctaaacaa 42223089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 29949700 - 29949627
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatc 91  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||||||| |||||||||||| || |||||||    
T  29949700 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggatggaatc 29949627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 31377694 - 31377616
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||| ||| |||||||||| | || || |||||||||||    
T  31377694 atatcatcgattttgtacggtcaaaattcatgaaagttcaaaacaaaagaatcttcaaacttcaaggatggaatctaaa 31377616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 11915163 - 11915086
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaa 94  Q
    |||||||| ||||||||||||||||||  ||||| ||  ||||||||| ||||||||||||| |||||| ||||||||    
T  11915163 atatcatcaattttttacagtcaaaatctatgaaggtccaaaaccaaagaatcttcaaattatagggtttgaatctaa 11915086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 11478177 - 11478293
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||||||| ||||| ||||||||||| || |||| ||  |||||| ||   |||||||||||||| |||| |||||||    ||| ||||||||||||||    
T  11478177 atatcatcaattttgtacagtcaaaagtcgtgaaggtccaaaaccgaa---tcttcaaattacagagttgaaatctaa----tttttttttacaggaggt 11478269  T
Q  117 aaactgaaaatcgttaatattaaa 140  Q
    |||| |||||||| ||||||||||    
T  11478270 aaaccgaaaatcgctaatattaaa 11478293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 7008004 - 7008066
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||||||| ||||||||||||    
T  7008004 atatcatcgattttatacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 7008066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 11915246 - 11915332
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaaggg 143  Q
    ||||||||||||||||||||||| || |||| ||| |||||||| | ||||||||||| |||||| |||||| | |||||||| ||||    
T  11915246 aaaaccaaaaaatcttcaaattatagagttgaaatttaaacaatat-tttttacaggaagtaaaccgaaaattgctaatattacaggg 11915332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 15580598 - 15580661
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||| ||||||||||||||| ||  |||| ||||||||||||||||||||    
T  15580598 atatcatcgattttgtacggtcaaaattcatgaaggtccaaaatcaaaaaatcttcaaattaca 15580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 24217061 - 24217139
Alignment:
Q  15 caatatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatcta 93  Q
    ||||||| |||||||| |||| | ||||||||| |||||| ||||||||| |||||||||||||||  ||| |||||||    
T  24217061 caatatcgtcgattttgtacaattaaaattcataaaagttcaaaaccaaagaatcttcaaattacatagtttgaatcta 24217139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 31989499 - 31989421
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    |||||||||||||| ||| |||| |||||||||| ||  ||||||||| | ||||||||||||| || |||||||||||    
T  31989499 atatcatcgattttgtacggtcataattcatgaaggtcgaaaaccaaagattcttcaaattacaaggatggaatctaaa 31989421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 19272806 - 19272746
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaatta 78  Q
    ||||| || ||||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  19272806 atatcttcaattttttacagtcaaaattcatgaaggtctaaaacca-aaaatcttcaaatta 19272746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 31396769 - 31396692
Alignment:
Q  18 tatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    ||||||| ||||| |||  |||||||| || || |||||||||| || |||||| |||||||||||||||||||||||    
T  31396769 tatcatcaattttgtaccatcaaaatttatcaaggtttaaaaccgaagaatctttaaattacagggttggaatctaaa 31396692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 874498 - 874436
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| || |||||||| ||||| |||||||||||    
T  874498 atatcttcgattttgtacagtcaaaattcatgaaggtctaaaacca-aaaatattcaaattaca 874436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 2526496 - 2526434
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| || |||||||||||||||| ||  |||||||||||| ||||||||||||    
T  2526496 atatcatcgattttgtatagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 2526434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 9419730 - 9419792
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||||||  |||| |||||||||||||| |||||    
T  9419730 atatcttcgattttgtacagtcaaaattcatgaaagtccaaaa-caaaaaatcttcaagttaca 9419792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 13315975 - 13315868
Alignment:
Q  35 agtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagg--gttggaatctaaacaatttctttttacagga-ggtaaactgaaaatcgtt 131  Q
    |||||||||||||| | ||  ||||||||| |||||||||||||||||  |||| |||||||||| ||  ||||||||| | ||||||| | |||||| |    
T  13315975 agtcaaaattcatgtaggtacaaaaccaaataatcttcaaattacagggcgttgaaatctaaacagtt--tttttacagaagggtaaaccggaaatcgct 13315878  T
Q  132 aatattaaag 141  Q
    ||||||||||    
T  13315877 aatattaaag 13315868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 29878910 - 29878973
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||| |||| ||||||||||| || || |||||||||| |||||||||||||||    
T  29878910 atatcatcaattttgtacaatcaaaattcataaaggtctaaaaccaaagaatcttcaaattaca 29878973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 36525420 - 36525358
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||| ||||||||||||||||||| ||  |||||||||||| ||||||||||||    
T  36525420 atatcatcaattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 36525358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 35791211 - 35791273
Alignment:
Q  45 catgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttcttttt 107  Q
    |||||| |||||||| |||| |||||| ||||||||| |||| |||||||||||||| |||||    
T  35791211 catgaaggtttaaaatcaaagaatctttaaattacagagttgaaatctaaacaattttttttt 35791273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 1975713 - 1975775
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| |||||| |||||||||||    
T  1975713 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatattcaaattaca 1975775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 7318236 - 7318174
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||| ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  7318236 atatcgtcgattttgtactgtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 7318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 16590674 - 16590725
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttcttttt 107  Q
    ||||||||| ||||||||||||||||| ||| ||| |||||||||| |||||    
T  16590674 aaaaccaaataatcttcaaattacaggtttgaaatataaacaattttttttt 16590725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 17886646 - 17886708
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| |||||||||| ||||||||  |  |||||||||||| ||||||||||||    
T  17886646 atatcatcgattttgtacagtcaaagttcatgaagatccaaaaccaaaaaa-cttcaaattaca 17886708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 18048961 - 18048899
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| ||||| |||||||||||    
T  18048961 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatattcaaattaca 18048899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 18756580 - 18756642
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| ||||||||| ||||||||    
T  18756580 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatctttaaattaca 18756642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 23381304 - 23381242
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| | ||||||||||||||||||||  ||||  |||||| ||||||||||||    
T  23381304 atatcatcgattttgtgcagtcaaaattcatgaaagtccaaaa-taaaaaagcttcaaattaca 23381242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 26498741 - 26498803
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| |  |||||||||||||||| ||  |||||||||||| ||||||||||||    
T  26498741 atatcatcgattttgtctagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 26498803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 28781852 - 28781914
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||| ||||||||| ||| ||||||||||||||| || ||||||||||| | ||||||||||||    
T  28781852 atattatcgattttgtacggtcaaaattcatgaaggtctaaaaccaaaata-cttcaaattaca 28781914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 30497295 - 30497233
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||| |||| |||||||||||||| || ||||||| | ||||||||||||||||    
T  30497295 atatcatctattttgtacattcaaaattcatgaaggtctaaaacc-agaaatcttcaaattaca 30497233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 38127907 - 38127845
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| || ||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  38127907 atatcttcaattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 38127845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 42794156 - 42794094
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| ||||| |||||||||||    
T  42794156 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatattcaaattaca 42794094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 43830733 - 43830795
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| |||||| |||||||||||    
T  43830733 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatattcaaattaca 43830795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 11478094 - 11478052
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    ||||||||| ||| ||||||||||||||||| |||||||||||    
T  11478094 aaaaccaaagaattttcaaattacagggttgaaatctaaacaa 11478052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 29884060 - 29883999
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattac 79  Q
    |||||||||||||| ||||| ||||||||||||| ||   ||||||||||| |||||||||||    
T  29884060 atatcatcgattttgtacagccaaaattcatgaaggtcctaaaccaaaaaa-cttcaaattac 29883999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 31397486 - 31397536
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttt 106  Q
    ||||||||| ||||||||||||||||| ||  |||||||||||||| ||||    
T  31397486 aaaaccaaataatcttcaaattacaggtttacaatctaaacaatttttttt 31397536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 19253538 - 19253482
Alignment:
Q  23 tcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||||||||||||||||| ||  ||||||| ||||||||||| |||||    
T  19253538 tcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaacttaca 19253482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 29098843 - 29098798
Alignment:
Q  66 aatcttcaaattacagggttggaatctaaacaatttctttttacag 111  Q
    ||||||||||||||| |||||||||||||||  ||| |||||||||    
T  29098843 aatcttcaaattacaaggttggaatctaaactttttttttttacag 29098798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 36525531 - 36525568
Alignment:
Q  43 ttcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| || ||||||||||||||||||||||||||    
T  36525531 ttcatgaaggtctaaaaccaaaaaatcttcaaattaca 36525568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 39373132 - 39373076
Alignment:
Q  23 tcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| | ||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  39373132 tcgattttgtccagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 39373076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 41906253 - 41906329
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacag-gaggtaaactgaaaatcgttaatatta 138  Q
    ||||||||||||||||||| ||||| ||| ||||||||||  |||||||| | ||||||||| |||||| || |||||    
T  41906253 aaaaaatcttcaaattacaaggttgaaatttaaacaattt-attttacagaggggtaaactggaaatcgctactatta 41906329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 2526605 - 2526653
Alignment:
Q  43 ttcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatc 91  Q
    |||||||| || ||||||||||||||||| |||||||| || |||||||    
T  2526605 ttcatgaaggtctaaaaccaaaaaatctttaaattacaaggatggaatc 2526653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 6e-30; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 16734225 - 16734081
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    ||||||| |||||  || ||||||||||||||||  | |||||||| | |||||||||||||||||||||||||||||||||||| |||||||||  |||    
T  16734225 atatcattgatttcgtagagtcaaaattcatgaagctctaaaaccatagaatcttcaaattacagggttggaatctaaacaattt-tttttacagagggt 16734127  T
Q  117 aaactgaaaatcgttaatattaaagggagcaaacatgaattaaccct 163  Q
    ||||||||||||| |||||||| | || |||||| || |||||||||    
T  16734126 aaactgaaaatcgctaatattacaagg-gcaaacttgtattaaccct 16734081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 9780518 - 9780638
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacagga-gg 115  Q
    |||||||||||||| ||||||||||||||||||| ||  ||||||||| ||||||||||||||| ||||| ||||||||||| |  ||||||||||| ||    
T  9780518 atatcatcgattttctacagtcaaaattcatgaaggtccaaaaccaaataatcttcaaattacatggttgtaatctaaacaaat--tttttacaggatgg 9780615  T
Q  116 taaactgaaaatcgttaatatta 138  Q
    ||||| | ||||||  |||||||    
T  9780616 taaaccggaaatcgcgaatatta 9780638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 23091847 - 23091936
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttt 106  Q
    |||||||||||||  || |||||||||| ||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  23091847 atatcatcgatttcgtatagtcaaaatttatgaaggttcaaaactaaaaaatcttcaaattacaaggttggaatctaaacaatttttttt 23091936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 5283745 - 5283628
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||||||||||||| || |||||||||||||||| ||| ||||||| ||||||||||||||| || |||| |||| ||||||||| |||||||||| |||    
T  5283745 atatcatcgattttgtagagtcaaaattcatgaaggttcaaaacca-aaaatcttcaaattaaagtgttgaaatcaaaacaattt-tttttacagg-ggt 5283649  T
Q  117 aaactgaaaatcgttaatatt 137  Q
    |||| | |||||| |||||||    
T  5283648 aaaccggaaatcgctaatatt 5283628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 62 - 174
Target Start/End: Complemental strand, 8678925 - 8678813
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatta-aagggagcaaacatgaattaac 160  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||||| |||||| |||||||| |  || | ||||||  ||||||    
T  8678925 aaaaaatcttcaaattacaaggtttgaatctaaacaattt-tttttacagggggtaaactggaaatcgataatattacataggggtaaacatatattaac 8678827  T
Q  161 cctataaattttta 174  Q
    ||||||| ||||||    
T  8678826 cctataatttttta 8678813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 5283847 - 5283944
Alignment:
Q  45 catgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacagg-aggtaaactgaaaatcgttaatattaaaggg 143  Q
    |||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||  |||||||||| |||||||| |||||||  |||||||| ||||    
T  5283847 catgaaggttcaaaatcaaaaaatcttcaaattacaggattggaatctaaacaatt--tttttacaggaaggtaaaccgaaaatcactaatattagaggg 5283944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 13555852 - 13555962
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacag-gagg 115  Q
    |||||||||||||| |||||||| |||||||||| |   ||||||||||| ||||  ||||||||||||| |||||||||||||| |||||||||  |||    
T  13555852 atatcatcgattttgtacagtcataattcatgaaggaccaaaaccaaaaa-tctttgaattacagggttgaaatctaaacaatttttttttacagaaagg 13555950  T
Q  116 taaactgaaaat 127  Q
    ||||| ||||||    
T  13555951 taaaccgaaaat 13555962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 49277851 - 49277956
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaaca---atttctttttacagga 113  Q
    |||||||| ||||| ||  ||||||||| ||||| ||| ||||||||| ||||||||||||||| ||||||||||||||||    ||| |||||||||||    
T  49277851 atatcatcaattttgtatcgtcaaaatttatgaaggttcaaaaccaaataatcttcaaattacaaggttggaatctaaacagatttttttttttacagga 49277950  T
Q  114 ggtaaa 119  Q
    ||||||    
T  49277951 ggtaaa 49277956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 29700646 - 29700560
Alignment:
Q  15 caatatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaattt 101  Q
    |||||| ||||||||| |||||| |||||||||||| ||  ||||  ||| ||||||||||| ||||||||||||||||||||||||    
T  29700646 caatatgatcgattttgtacagtaaaaattcatgaaggtcaaaaattaaagaatcttcaaataacagggttggaatctaaacaattt 29700560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 42161360 - 42161239
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttaca-ggagg 115  Q
    |||||||| ||||| |||   ||||||||||||| ||  |||| |||||| |||||||||||||| |||| ||||||||||||||  ||||||| |||||    
T  42161360 atatcatcaattttgtacctacaaaattcatgaaggtcaaaaatcaaaaa-tcttcaaattacagagttgaaatctaaacaattttattttacatggagg 42161262  T
Q  116 taaactgaaaatcgttaatatta 138  Q
    ||||| |||||||| ||||||||    
T  42161261 taaaccgaaaatcgctaatatta 42161239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 165
Target Start/End: Complemental strand, 13555700 - 13555598
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaagggagcaaacatgaattaacc 161  Q
    ||||||||||||||||||||||||| ||||||| ||| || |||||||||| ||||||| | |||||| |||||||| || | | ||||||  |||||||    
T  13555700 aaaaaatcttcaaattacagggttgaaatctaaccaaattttttttacagg-ggtaaaccggaaatcgctaatattacagagggtaaacatatattaacc 13555602  T
Q  162 ctat 165  Q
    ||||    
T  13555601 ctat 13555598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 14121477 - 14121539
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  14121477 atatcatcgattttgtacagtcaaaattcatgaaagtccaaaaccaaaaaa-cttcaaattaca 14121539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 29104305 - 29104242
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||    
T  29104305 atatcttcgattttgtacagttaaaattcatgaaggtctaaaaccaaaaaatcttcaaattaca 29104242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 8810142 - 8810224
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaaggga 144  Q
    ||||||||||||||||||| ||||| ||||| |||||||| ||||||||||  |||||| | |||||| |||||||| |||||    
T  8810142 aaaaaatcttcaaattacaaggttgaaatcttaacaatttttttttacagggagtaaaccggaaatcgctaatattacaggga 8810224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 32682402 - 32682475
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatc 91  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||||||| |||||||||||| || |||||||    
T  32682402 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattacaaggatggaatc 32682475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 49277769 - 49277655
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaagggagcaaacatgaa 155  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||| || ||||| || | |||||| ||||||||| |||||||| |||| | | ||||| |    
T  49277769 aaaaccaaataattttcaaattacacggttggaatctaaacaaatt-tttttgcaaggggtaaattgaaaatcgctaatattacaggg-gtacacatgta 49277672  T
Q  156 ttaaccctataaatttt 172  Q
    |||||||| || |||||    
T  49277671 ttaaccctttagatttt 49277655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 9780434 - 9780383
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttcttttt 107  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| |||||    
T  9780434 aaaatcaaagaatcttcaaattacagggttggaatctaaacaattttttttt 9780383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 25244590 - 25244652
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||||||| ||||||||||||    
T  25244590 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 25244652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 25786273 - 25786191
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggag-gtaaactgaaaatcgttaatatta 138  Q
    ||||||||| |||||| |||||||||||||||||||||||||| || |||||||   || ||||||||||||||| ||||||||    
T  25786273 aaaaccaaataatctttaaattacagggttggaatctaaacaaatt-tttttacgtaagagtaaactgaaaatcgctaatatta 25786191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 29172725 - 29172800
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatct 92  Q
    |||||||| ||||| ||||| ||||| ||| ||| ||| ||||||||| ||||||||||||||| |||||||||||    
T  29172725 atatcatctattttgtacagccaaaagtcacgaaggttcaaaaccaaagaatcttcaaattacaaggttggaatct 29172800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 42056123 - 42056061
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||||||| ||||||||||||    
T  42056123 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 42056061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 2032646 - 2032708
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaacc-aaaaaatcttcaaatta 78  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||| |||||||||||||||||    
T  2032646 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaaatcttcaaatta 2032708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 37589600 - 37589658
Alignment:
Q  36 gtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaa 94  Q
    ||||||||||| |||||| ||||| |||| ||||||||||||||| |||||||||||||    
T  37589600 gtcaaaattcacgaaagtctaaaatcaaagaatcttcaaattacatggttggaatctaa 37589658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 5114183 - 5114139
Alignment:
Q  36 gtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  5114183 gtcaaaattcatgaatgttcaaaaccaaaaaatcttcaaattaca 5114139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 3652415 - 3652353
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  3652415 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 3652353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 30409336 - 30409398
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| |||||| |||||||||||| ||  |||||||||||| ||||||||||||    
T  30409336 atatcatcgattttatacagttaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 30409398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 30919062 - 30919000
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  30919062 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 30919000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 32681928 - 32681990
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||| ||||||||||||||| |||||||||| ||||||||| ||||||||    
T  32681928 atatcttcgattttgtactgtcaaaattcatgaaggtttaaaacc-aaaaatctttaaattaca 32681990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 39152101 - 39152039
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||| ||||||||||||| ||| || ||| ||||||||||||||||||||    
T  39152101 atatcatcgattttgtacggtcaaaattcatg-aagattcaaaacaaaaaatcttcaaattaca 39152039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 16734298 - 16734411
Alignment:
Q  45 catgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaaggga 144  Q
    |||||| || ||||| |||| ||||||||||||||| ||||| |||||||||||  | ||||||| ||||||| || |||||||| | |||||| ||||     
T  16734298 catgaaggtctaaaatcaaagaatcttcaaattaca-ggttgaaatctaaacaa--tatttttaccggaggtacaccgaaaatcgcttatattataggg- 16734393  T
Q  145 gcaaacatgaattaaccc 162  Q
    | ||||||| ||||||||    
T  16734394 gtaaacatgtattaaccc 16734411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 46088192 - 46088142
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaa 67  Q
    |||||||||||||| ||||||||||||||||||| ||  ||||||||||||    
T  46088192 atatcatcgattttgtacagtcaaaattcatgaaggtcgaaaaccaaaaaa 46088142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 49533208 - 49533131
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    |||||||| ||||| |||| |||||||| ||||||||  ||||  ||||||||||||||||||| ||||| ||||||||    
T  49533208 atatcatcaattttgtacattcaaaatt-atgaaagtccaaaatgaaaaaatcttcaaattacaaggttgaaatctaaa 49533131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 8810023 - 8809935
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttt 106  Q
    ||||||| |||||| |||| | |||||||||||| ||| ||||| ||||| ||||||||||| | | ||| |||||||||||||| ||||    
T  8810023 atatcattgattttgtacaattaaaattcatgaaggttcaaaactaaaaa-tcttcaaattataagattgaaatctaaacaatttttttt 8809935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 18165120 - 18165200
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    |||||||| ||||| ||||||||||||||||||| ||  |||||| | |||||||||||||||| || || || ||||||||    
T  18165120 atatcatctattttgtacagtcaaaattcatgaaggtccaaaacc-agaaatcttcaaattacaaggatgaaaactaaacaa 18165200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 21744875 - 21744798
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaa 94  Q
    |||||||||||||| ||| ||||||||| | ||| ||  ||||||||| |||||| |||||| | |||||||||||||    
T  21744875 atatcatcgattttgtacggtcaaaattgaagaaggtccaaaaccaaataatctttaaattatatggttggaatctaa 21744798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 7913343 - 7913405
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| |||||| |||||||||||    
T  7913343 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatattcaaattaca 7913405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 17696295 - 17696357
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||| ||||||||||||||| ||  |||||| ||||||||||||||||||    
T  17696295 atatcttcgattttgtactgtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 17696357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 18510127 - 18510065
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||| |||||||||||||| |||||    
T  18510127 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaagttaca 18510065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 21507970 - 21507908
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| ||||| |||||||||||    
T  21507970 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatattcaaattaca 21507908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 22854108 - 22854046
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| ||||| |||||||||||    
T  22854108 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatattcaaattaca 22854046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 49296232 - 49296294
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||| |||||||||||||| |||||    
T  49296232 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaa-caaaaaatcttcaagttaca 49296294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 50773433 - 50773371
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||| ||||||||||||||| ||  ||||||| |||||||||||||||||    
T  50773433 atatcttcgattttgtactgtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 50773371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 52194395 - 52194457
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||||| |||||| ||| |||||||||||| || ||| |||||||||||| ||||||||||||    
T  52194395 atatcattgattttgtacggtcaaaattcataaaggttcaaaaccaaaaaa-cttcaaattaca 52194457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 26040746 - 26040800
Alignment:
Q  26 attttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| ||| ||||||||||||||| ||  ||||| |||||||||||||||||||    
T  26040746 attttgtacggtcaaaattcatgaaggtccaaaacaaaaaaatcttcaaattaca 26040800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 31031677 - 31031611
Alignment:
Q  26 attttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatct 92  Q
    ||||| ||| ||||||||| ||||| ||  || |||||| ||| |||||||||||||||||||||||    
T  31031677 attttgtactgtcaaaatttatgaaggtccaacaccaaagaatattcaaattacagggttggaatct 31031611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 17251501 - 17251538
Alignment:
Q  43 ttcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| || ||||||||||||||||||||||||||    
T  17251501 ttcatgaaggtctaaaaccaaaaaatcttcaaattaca 17251538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 21744957 - 21744998
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaaca 97  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||    
T  21744957 aaaaccaaagaatattcaaattacatggttggaatctaaaca 21744998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 39133229 - 39133169
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaatta 78  Q
    ||||| |||||||| ||| ||||||||||||||| ||  ||||||| |||||||||||||||    
T  39133229 atatcttcgattttgtactgtcaaaattcatgaaggtccaaaacca-aaaatcttcaaatta 39133169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 49533290 - 49533386
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacagga-ggtaaactgaaaatcgttaatattaaagggagcaaacat 152  Q
    ||||||||| ||||||||||||| | ||||  |||||||||||||| ||||||||  | |||||||   ||||||||||||||| || ||| ||||||    
T  49533290 aaaaccaaataatcttcaaattataaggttataatctaaacaattt-tttttacaaaagggtaaaccataaatcgttaatattacagagagtaaacat 49533386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 16876067 - 16876107
Alignment:
Q  36 gtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaat 76  Q
    ||||||||||||||| || |||||||||| |||||||||||    
T  16876067 gtcaaaattcatgaaggtctaaaaccaaagaatcttcaaat 16876107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 23184900 - 23184839
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||  | ||||||||||||||||||    
T  23184900 atatcttcgattttgtacagtcaaaattcatgaaggtccaaa--ccaaaaatcttcaaattaca 23184839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 9235431 - 9235337
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacagg 112  Q
    |||||||||||||| ||||||||||||||||||| ||  ||||||||||  ||||||||||||| ||||| |||||||||||||| ||||||||||    
T  9235431 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaat-tcttcaaattacatggttgaaatctaaacaatttttttttacagg 9235337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 23289114 - 23289213
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaagggagcaaacatgaattaacc 161  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||  |||||||| |||| ||||||||  |||||||    
T  23289114 aaaaaatcttcaaattacagggttggaatctaaacaattt-tttttacaggggataaaccgaaaatcactaatattacaggg-gcaaacatatattaacc 23289211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 27702968 - 27703051
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaattt 101  Q
    |||||||||||||| ||| ||||||||| |||||||| | |||||||| ||||||||||||| || ||| ||||||||| |||||    
T  27702968 atatcatcgattttgtaccgtcaaaatttatgaaagtct-aaaccaaacaatcttcaaattatagagtttgaatctaaataattt 27703051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 9235545 - 9235596
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttcttttt 107  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| |||||    
T  9235545 aaaatcaaaaaatcttcaaattacagggttgaaatctaaacaattttttttt 9235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 9305637 - 9305699
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  9305637 atatcttcgattttgtacagtcaaaattcatgaaggttcaaaacc-aaaaatcttcaaattaca 9305699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 143
Target Start/End: Complemental strand, 13373282 - 13373197
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaaggg 143  Q
    ||||||||| |||||||||||||||| |||| ||| |||||||||| |||||||||| ||||||| | |||||| |||||||| ||||    
T  13373282 aaaaccaaagaatcttcaaattacagagttgaaatataaacaattt-tttttacagg-ggtaaaccggaaatcgctaatattacaggg 13373197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 23245635 - 23245573
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||||||||||||||||  |||| | ||||||||||||||||||    
T  23245635 atatcatcgattttgtacagtcaaaattcatgaaagtccaaaa-ctaaaaatcttcaaattaca 23245573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 24528884 - 24528805
Alignment:
Q  16 aatatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||| ||||  ||||||||||| ||  |||||||||||||    
T  24528884 aatatcatcgattttgtacagtcaaaattcatgaaaatctaaaacca-aaaagattcaaattacatgg--ggaatctaaacaa 24528805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 28786491 - 28786558
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggt 84  Q
    |||||||||||||| ||||||||||||||||||| ||  |||| |||| |||||||||||| ||||||    
T  28786491 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaatcaaagaatcttcaaattgcagggt 28786558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 5600260 - 5600163
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggagg 115  Q
    |||| ||||||||| |||||||||||||||| || ||  ||||| ||||||| || |||||| | ||||| |||||||| ||||| |||||||||||||    
T  5600260 atattatcgattttgtacagtcaaaattcataaaggtacaaaactaaaaaat-tttaaattatacggttgaaatctaaataatttttttttacaggagg 5600163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 5640360 - 5640457
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggagg 115  Q
    |||| ||||||||| |||||||||||||||| || ||  ||||| ||||||| || |||||| | ||||| |||||||| ||||| |||||||||||||    
T  5640360 atattatcgattttgtacagtcaaaattcataaaggtacaaaactaaaaaat-tttaaattatacggttgaaatctaaataatttttttttacaggagg 5640457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 14698177 - 14698057
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttac-aggagg 115  Q
    ||||||| |||||| ||| |||||||||||| || ||| ||||  ||||||||||||||||||| | ||||||| ||||||| || ||||||| || |||    
T  14698177 atatcattgattttgtactgtcaaaattcataaaggttcaaaat-aaaaaatcttcaaattacaagattggaatttaaacaaatt-tttttacaagaagg 14698080  T
Q  116 taaactgaaaatcgttaatatta 138  Q
    |||||  |||||| |||||||||    
T  14698079 taaaccaaaaatcattaatatta 14698057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 34227465 - 34227409
Alignment:
Q  23 tcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||||||||||||||||| || |||||||| |||||||||||||||||    
T  34227465 tcgattttgtacagtcaaaattcatgaaggtctaaaacca-aaaatcttcaaattaca 34227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 2873593 - 2873531
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  2873593 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 2873531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 24768683 - 24768621
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| |||||||||||||||| || ||| ||||||| |||||||||||||||||    
T  24768683 atatcttcgattttgtacagtcaaaattcattaaggttcaaaacca-aaaatcttcaaattaca 24768621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 29346149 - 29346087
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  29346149 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 29346087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 30872626 - 30872688
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||| ||||||||| ||||||||||||||||||| ||  |||||||||||| ||||||||||||    
T  30872626 atattatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 30872688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 32684793 - 32684855
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||    
T  32684793 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 32684855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 4944026 - 4944103
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    |||||||| ||||| ||| |||||||||||||||||||||||| | |||||| ||||||||| | || || ||||||||    
T  4944026 atatcatcaattttgtaccgtcaaaattcatgaaagtttaaaa-ctaaaaatattcaaattataaggatgcaatctaaa 4944103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 13980034 - 13980084
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttt 106  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||| ||||    
T  13980034 aaaatcaaagaatcttcaaattacagggttagaatctaaacaatttttttt 13980084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 23288993 - 23288916
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    ||||||| |||||| ||| ||||| |||||||||  | |||||||||||| ||||||||||||||| ||| ||||||||    
T  23288993 atatcattgattttgtacggtcaatattcatgaagttctaaaaccaaaaa-tcttcaaattacaggattgaaatctaaa 23288916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 31343805 - 31343867
Alignment:
Q  32 tacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaa 94  Q
    ||||||||||||||||||| ||  ||||||||| |||||| |||||||||||||  |||||||    
T  31343805 tacagtcaaaattcatgaaggtcaaaaaccaaataatctttaaattacagggttttaatctaa 31343867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 8442148 - 8442208
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaatta 78  Q
    |||||||||||||| |||| |||||||||||||| ||  |||||||||||| ||||||||||    
T  8442148 atatcatcgattttatacactcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaatta 8442208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 24754673 - 24754628
Alignment:
Q  53 tttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||||    
T  24754673 tttaaaatcaaagaatcttcaaattacatggttggaatctaaacaa 24754628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 30221915 - 30221855
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaatta 78  Q
    |||| ||||||||| ||| ||||||||||||||| ||| |||||||||||| ||||||||||    
T  30221915 atattatcgattttgtacggtcaaaattcatgaaggttcaaaaccaaaaaa-cttcaaatta 30221855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 37545128 - 37545184
Alignment:
Q  23 tcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||||||||||||||||| ||  |||||| ||||||||||||||||||    
T  37545128 tcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 37545184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 5600368 - 5600427
Alignment:
Q  53 tttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacagga 113  Q
    |||||||  ||||||||||||||||||| ||||| ||| |||||||||| |||||||||||    
T  5600368 tttaaaataaaaaaatcttcaaattacaaggttgaaatttaaacaattt-tttttacagga 5600427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 5640252 - 5640193
Alignment:
Q  53 tttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacagga 113  Q
    |||||||  ||||||||||||||||||| ||||| ||| |||||||||| |||||||||||    
T  5640252 tttaaaataaaaaaatcttcaaattacaaggttgaaatttaaacaattt-tttttacagga 5640193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 14529733 - 14529693
Alignment:
Q  55 taaaaccaaaaaatcttcaaattacagggttggaatctaaa 95  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  14529733 taaaacgaaagaatcttcaaattacagggttggaatctaaa 14529693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 5566714 - 5566776
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| | ||||||||||||||||    
T  5566714 atatcgtcgattttgtacagtcaaaattcatgaaggtccaaaacc-agaaatcttcaaattaca 5566776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 13572684 - 13572622
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||||||| ||||||||||||||| ||  ||||||| |||||||| ||||||||    
T  13572684 atatcgtcgattttttactgtcaaaattcatgaaggtccaaaacca-aaaatctttaaattaca 13572622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 15935617 - 15935679
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| || ||||| ||||||||||||||||||| || |||||||||||| || ||||||||||    
T  15935617 atatcttcaattttgtacagtcaaaattcatgaaggtctaaaaccaaaaattc-tcaaattaca 15935679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 23389163 - 23389101
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||| ||||| ||  ||||||| |||||||||||||||||    
T  23389163 atatcttcgattttgtacagtcaaaatttatgaaggtccaaaacca-aaaatcttcaaattaca 23389101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 24331559 - 24331621
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| |||| |||||||||||||| ||  |||||| ||||||||||||||||||    
T  24331559 atatcttcgattttgtacaatcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 24331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 24375877 - 24375940
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||| ||||||| ||||||||||| ||  ||||  |||||||||||||||||||    
T  24375877 atatcatcaattttgtacagtcgaaattcatgaaggtccaaaatgaaaaaatcttcaaattaca 24375940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 38703828 - 38703890
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| |||||| |||||||||||| ||  |||||| ||||||||||||||||||    
T  38703828 atatcttcgattttgtacagtaaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 38703890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 41509612 - 41509674
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| |||| |||||||||||||| ||  |||||| ||||||||||||||||||    
T  41509612 atatcttcgattttgtacaatcaaaattcatgaaggtccaaaacc-aaaaatcttcaaattaca 41509674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 13085256 - 13085310
Alignment:
Q  47 tgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaattt 101  Q
    |||| ||||||||||||| ||||||||||||||| ||||| |||| || ||||||    
T  13085256 tgaaggtttaaaaccaaagaatcttcaaattacaaggttgaaatcaaagcaattt 13085310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 38063226 - 38063260
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaac 96  Q
    |||||||||||||||||||||||||||||| ||||    
T  38063226 aaaaaatcttcaaattacagggttggaatcaaaac 38063260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 13175013 - 13174933
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    ||||| |||||||| ||| ||||||||||||||| ||| |||||| | |||||| ||||||||| ||  |||| ||||||||    
T  13175013 atatcgtcgattttgtacggtcaaaattcatgaatgttcaaaacc-agaaatctgcaaattacaaggacggaaactaaacaa 13174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 29212014 - 29211934
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    |||||||  ||||| || |||||||||||||||| ||  ||||||| ||| ||||||||||||| || ||||| ||||||||    
T  29212014 atatcatatattttgtatagtcaaaattcatgaaggtccaaaaccagaaa-tcttcaaattacaaggatggaaactaaacaa 29211934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 31974921 - 31974970
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaa 66  Q
    ||||| || ||||| ||||||||||||||||||| ||| |||||||||||    
T  31974921 atatcttcaattttgtacagtcaaaattcatgaaggttcaaaaccaaaaa 31974970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 13373389 - 13373425
Alignment:
Q  70 ttcaaattacagggttggaatctaaacaatttctttt 106  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  13373389 ttcaaattacagtgttggaatctaaacaatttttttt 13373425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 29212137 - 29212200
Alignment:
Q  56 aaaaccaaaaaatcttcaaattac-agggttggaatctaaacaatttctttttacaggaggtaaa 119  Q
    |||||||||||||||||||||||| ||||  | || ||||||||||| |||||||||||| ||||    
T  29212137 aaaaccaaaaaatcttcaaattacaagggacgaaaactaaacaattt-tttttacaggagataaa 29212200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 29427091 - 29427024
Alignment:
Q  75 attacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaaggg 143  Q
    |||| ||||||||||| |||||||||| |||||||| | ||||||| | |||||| |||||||| ||||    
T  29427091 attatagggttggaatttaaacaatttttttttacaag-ggtaaacaggaaatcgctaatattacaggg 29427024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 33199986 - 33200134
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||||||| ||||| |||| || |||||||| || ||  |||| |||| ||||||||||||||||||||| |||||||||||||  ||||| |||| |||    
T  33199986 atatcatcaattttgtacattcgaaattcataaaggtccaaaatcaaagaatcttcaaattacagggttgtaatctaaacaatt--tttttgcagggggt 33200083  T
Q  117 aaactgaaaatcgttaatattaaagggagcaaacatgaattaaccctataa 167  Q
    ||| || |||||| |||||||| | || | ||||||| |||||||||||||    
T  33200084 aaattggaaatcgctaatattacatggggtaaacatgtattaaccctataa 33200134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 3816675 - 3816795
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    ||||||| |||||| ||| |||||||  |||||| ||  ||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| |||    
T  3816675 atatcattgattttgtacggtcaaaacccatgaaggtcaaaaaccaaagaatcttcaaattacagggttgaaatctaaacaattt-tttttacagggggt 3816773  T
Q  117 aaactgaaaatcgttaatatta 138  Q
    ||||   |||||| ||||||||    
T  3816774 aaaccagaaatcgctaatatta 3816795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 25166997 - 25166878
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggt 116  Q
    |||||||||||||| || ||||||||||||| || ||  ||||  |||||||||| ||||||||  ||| ||||||||||||||| |||||||||||| |    
T  25166997 atatcatcgattttgtatagtcaaaattcataaaggtccaaaataaaaaaatctttaaattacaaagttcgaatctaaacaattt-tttttacaggagat 25166899  T
Q  117 aaactgaaaatcgttaatatt 137  Q
    ||| ||||||||| |||||||    
T  25166898 aaattgaaaatcgctaatatt 25166878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 20757579 - 20757489
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttcttttt 107  Q
    |||||||||||||| ||| || ||||||||| || ||| |||||||   |||||||||||||||||||||||||||||||||||| |||||    
T  20757579 atatcatcgattttgtacggttaaaattcattaaggttcaaaaccactgaatcttcaaattacagggttggaatctaaacaattttttttt 20757489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 18274332 - 18274403
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttgga 88  Q
    |||||||||||||| |||||| |||||| ||||||||| |||| |||| |||||||||||||||||||||||    
T  18274332 atatcatcgattttgtacagttaaaattaatgaaagttcaaaatcaaagaatcttcaaattacagggttgga 18274403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 11197792 - 11197723
Alignment:
Q  22 atcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatc 91  Q
    ||||||||| ||| |||||||||||||||||| |||| ||||| |||||||||||||||| |||||||||    
T  11197792 atcgattttgtacggtcaaaattcatgaaagtctaaatccaaacaatcttcaaattacagagttggaatc 11197723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 9662831 - 9662710
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatctt-caaattacagggttggaatctaaacaatttctttttacagga-g 114  Q
    ||||| |||| ||| |||||||||||||||| || ||  ||||| |||||||||| ||||||||||| |||||||||||||| ||| ||||||||||| |    
T  9662831 atatcgtcgactttgtacagtcaaaattcataaaggtccaaaac-aaaaaatctttcaaattacagg-ttggaatctaaacattttttttttacaggatg 9662734  T
Q  115 gtaaactgaaaatcgttaatatta 138  Q
    ||||||  ||||||| ||||||||    
T  9662733 gtaaaccaaaaatcgctaatatta 9662710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 33198641 - 33198544
Alignment:
Q  45 catgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaaggg 143  Q
    |||||| || |||||||||| ||||||||||||| |||| ||||||||||| ||||| ||||||||||| |||||| | |||||| ||| |||| ||||    
T  33198641 catgaatgtctaaaaccaaagaatcttcaaattatagggatggaatctaaataattt-tttttacaggaagtaaaccggaaatcgctaaaattacaggg 33198544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 9222558 - 9222620
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||||||||||||| ||  |||||||||||| ||||||||||||    
T  9222558 atatcatcgattttgtacagtcaaaattcatgaaggtccaaaaccaaaaaa-cttcaaattaca 9222620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 854153 - 854240
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaa---ttacagggttggaatctaaacaattt 101  Q
    ||||||| ||| || |||| |||||||||||||| ||| |||| |||| ||||||||||   ||||||||||| ||||||||||||||    
T  854153 atatcatagatattgtacaatcaaaattcatgaatgttcaaaatcaaagaatcttcaaattgttacagggttgaaatctaaacaattt 854240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 9044544 - 9044432
Alignment:
Q  17 atatcatcgattttttacagtcaaaa-ttcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggagg 115  Q
    |||||||||||||| || |||||||| |||||||| ||  |||| |||||  ||||||||||||||  ||||||||||||||||||  ||||| ||  ||    
T  9044544 atatcatcgattttgtatagtcaaaaattcatgaaggtccaaaatcaaaat-tcttcaaattacagaattggaatctaaacaattttattttatagaggg 9044446  T
Q  116 taaactgaaaatcg 129  Q
    ||||||| ||||||    
T  9044445 taaactggaaatcg 9044432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 8237783 - 8237721
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| ||||||||||||||||||| |   |||||||||||| ||||||||||||    
T  8237783 atatcatcgattttgtacagtcaaaattcatgaaggaccaaaaccaaaaaa-cttcaaattaca 8237721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 10343642 - 10343584
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaat 76  Q
    ||||| |||||||| ||||||||||||||||||||||  ||||||| |||||||||||||    
T  10343642 atatcttcgattttgtacagtcaaaattcatgaaagtacaaaacca-aaaatcttcaaat 10343584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 13462764 - 13462702
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||||| |||||| ||||||||||||||||||| ||||| |||| ||||| ||||||||||||    
T  13462764 atatcattgattttatacagtcaaaattcatgaaggtttagaacc-aaaaagcttcaaattaca 13462702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 25167111 - 25167191
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatatta 138  Q
    |||| |||| |||||||||||||||  ||||||||||||| ||||| ||||||| | ||| |||| |||||||||||||||||    
T  25167111 aaaatcaaataatcttcaaattacacagttggaatctaaagaattt-tttttac-gaaggcaaaccgaaaatcgttaatatta 25167191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 11157343 - 11157271
Alignment:
Q  22 atcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaa 94  Q
    ||||||||| |||  ||||||||||| ||| | |||| ||||| |||||||||||||||| ||| ||||||||    
T  11157343 atcgattttgtacgatcaaaattcataaaaatctaaatccaaacaatcttcaaattacagagtttgaatctaa 11157271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 3108712 - 3108774
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| |||| |||||||| ||||| ||  |||||| ||||||||||||||||||    
T  3108712 atatcatcgattttatacaatcaaaattaatgaaggtccaaaacc-aaaaatcttcaaattaca 3108774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 9044657 - 9044740
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttcttttt-acaggaggtaaactgaaaatcgttaatatta 138  Q
    |||| |||| ||||||||||||||| ||||||||| |||||||||| ||||| ||||   |||||   ||||||||||||||||    
T  9044657 aaaatcaaataatcttcaaattacaaggttggaatttaaacaattttttttttacagagagtaaatcaaaaatcgttaatatta 9044740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 10546093 - 10546155
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||||||||| |||||| |||||||||||| |   |||||||||||| ||||||||||||    
T  10546093 atatcatcgattttgtacagttaaaattcatgaaggaccaaaaccaaaaaa-cttcaaattaca 10546155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 12293007 - 12292945
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| || ||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  12293007 atatcttcaattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 12292945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 80
Target Start/End: Original strand, 29942752 - 29942787
Alignment:
Q  45 catgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||||||| ||||||||||||||||||||||||||    
T  29942752 catgaaagtctaaaaccaaaaaatcttcaaattaca 29942787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 10350218 - 10350149
Alignment:
Q  39 aaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttac 109  Q
    |||||||||||| ||  |||||||| || |||||||||| |||||||| |||||||||||||  |||||||    
T  10350218 aaaattcatgaaggtccaaaaccaagaa-tcttcaaatttcagggttgaaatctaaacaattgttttttac 10350149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 32603721 - 32603776
Alignment:
Q  23 tcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||||||||||||||||| ||  ||||||  |||||||||||||||||    
T  32603721 tcgattttgtacagtcaaaattcatgaaggtccaaaacc--aaaatcttcaaattaca 32603776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 9222448 - 9222411
Alignment:
Q  43 ttcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| || ||||||||||||||||||||||||||    
T  9222448 ttcatgaaggtctaaaaccaaaaaatcttcaaattaca 9222411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 17158350 - 17158406
Alignment:
Q  23 tcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    |||||||| ||||||||||||||||| | ||  |||||| ||||||||||||||||||    
T  17158350 tcgattttgtacagtcaaaattcatggaggtccaaaacc-aaaaatcttcaaattaca 17158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 20757663 - 20757707
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaattt 101  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||    
T  20757663 aaaaccaaaaaatcttcaaatt-tagggttggaatctaagcaattt 20757707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 164
Target Start/End: Original strand, 13348 - 13449
Alignment:
Q  62 aaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaaagggagcaaacatgaattaacc 161  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||  ||||||| |||||||| |||| | ||||||  |||||||    
T  13348 aaaaaatcttcaaattacaaggttggaatctaaacaaatt-tttttacagggggtaaaccaaaaatcgctaatattacagggggtaaacatatattaacc 13446  T
Q  162 cta 164  Q
    |||    
T  13447 cta 13449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 82292 - 82172
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggag-g 115  Q
    |||| ||| ||||| ||||||||||||||||||| || |||||| ||||||| ||||||||||| |||||||||||||||||| | ||||||||| ||      
T  82292 atattatcaattttgtacagtcaaaattcatgaaggtctaaaacaaaaaaat-ttcaaattacatggttggaatctaaacaatgt-tttttacagaagaa 82195  T
Q  116 taaactgaaaatcgttaatatta 138  Q
    ||||  |||||||||||||||||    
T  82194 taaatcgaaaatcgttaatatta 82172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 212657 - 212595
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  212657 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 212595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 316576 - 316488
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttcttttt 107  Q
    |||||||||||||| |||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||  |||||||||||||| |||||    
T  316576 atatcatcgattttgtacagtcaaa-ttcatgaa-gttcaaaaccaaataatcttcaaattacagggttaaaatctaaacaattttttttt 316488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 34980 - 35063
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaattt 101  Q
    |||||||||||||| || |||||||||||||||| ||   |||| | ||||||||||||||||||||||| ||||||||||||||    
T  34980 atatcatcgattttgtatagtcaaaattcatgaaggtccgaaac-acaaaatcttcaaattacagggttgaaatctaaacaattt 35063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 9365 - 9303
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||||||||| |||||||||||    
T  9365 atatcttcgattttatacagtcaaaattcatgaaggtccaaaaccaaaaaat-ttcaaattaca 9303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 12612 - 12550
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||| ||||  ||||||| |||||||||||||||||    
T  12612 atatcttcgattttgtacagtcaaaattcatggaagtccaaaacca-aaaatcttcaaattaca 12550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 25938 - 26019
Alignment:
Q  56 aaaaccaaaaaatcttcaaattacagggttggaatctaaacaatttctttttacaggaggtaaactgaaaatcgttaatattaa 139  Q
    |||| ||||||| |||||||||| |||||||||||||||| ||||| |||||||| | ||||||| | |||||| |||||||||    
T  25938 aaaatcaaaaaaccttcaaatta-agggttggaatctaaataattt-tttttacaaggggtaaaccggaaatcgctaatattaa 26019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 332208 - 332146
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||||||||    
T  332208 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacca-aaaatcttcaaattaca 332146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 18831 - 18893
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattaca 80  Q
    ||||| |||||||| ||||||||||||||||||| ||  |||||| ||||||||||||| ||||    
T  18831 atatcttcgattttgtacagtcaaaattcatgaaggtccaaaacc-aaaaatcttcaaaataca 18893  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 145121 - 145201
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatctaaacaa 98  Q
    |||||||| ||||| |||||||| |||||||||| ||  |||| ||||| |||||||||||| | || ||||| ||||||||    
T  145121 atatcatctattttgtacagtcacaattcatgaaggtccaaaatcaaaa-atcttcaaattataaggatggaaactaaacaa 145201  T

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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 23291 - 23367
Alignment:
Q  17 atatcatcgattttttacagtcaaaattcatgaaagtttaaaaccaaaaaatcttcaaattacagggttggaatcta 93  Q
    |||||||||||||| || ||| |||||| |||||  |  ||||||||| |||||  ||||| |||||||||||||||    
T  23291 atatcatcgattttatatagttaaaatttatgaagctccaaaaccaaagaatctataaattccagggttggaatcta 23367  T

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