View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9756_10 (Length: 303)

Name: NF9756_10
Description: NF9756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9756_10
NF9756_10
[»] chr8 (9 HSPs)
chr8 (9-303)||(15805263-15805557)
chr8 (21-291)||(15799740-15800013)
chr8 (21-243)||(15764342-15764564)
chr8 (21-302)||(15813112-15813395)
chr8 (21-298)||(15697226-15697506)
chr8 (23-303)||(15703602-15703881)
chr8 (21-251)||(15722486-15722716)
chr8 (21-242)||(15711953-15712174)
chr8 (41-184)||(15692667-15692810)
[»] chr3 (5 HSPs)
chr3 (43-204)||(3080378-3080539)
chr3 (21-202)||(4547994-4548175)
chr3 (43-204)||(3094815-3094976)
chr3 (44-175)||(3102353-3102484)
chr3 (43-183)||(3122480-3122620)
[»] chr4 (10 HSPs)
chr4 (110-174)||(36370555-36370619)
chr4 (110-171)||(36399760-36399821)
chr4 (110-174)||(36435825-36435889)
chr4 (105-177)||(31717667-31717739)
chr4 (110-174)||(36376327-36376391)
chr4 (110-174)||(36407217-36407281)
chr4 (110-174)||(36412340-36412404)
chr4 (102-174)||(36419371-36419443)
chr4 (110-174)||(36429372-36429436)
chr4 (124-177)||(31724911-31724964)
[»] chr2 (3 HSPs)
chr2 (93-175)||(2662487-2662569)
chr2 (104-174)||(2672478-2672548)
chr2 (104-168)||(34192574-34192638)
[»] chr1 (1 HSPs)
chr1 (93-183)||(21917947-21918037)
[»] chr5 (1 HSPs)
chr5 (138-183)||(470065-470110)


Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 9 - 303
Target Start/End: Complemental strand, 15805557 - 15805263
Alignment:
Q  9 agcataggcacatagattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatcca 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15805557 agcataagcacatagattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatcca 15805458  T
Q  109 cagagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatgcccg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15805457 cagagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatgcccg 15805358  T
Q  209 acaaaaacagaaagagtttttggcacctagtaagcattattggaaagtttttcaaagcaaatattaaaaaatttcacatgattcacaactgacag 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  15805357 acaaaaacagaaagagtttttggcacctagtaagcattattggaaagtttttcaaagcaaatattataaattttcacatgattcacaactgacag 15805263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 21 - 291
Target Start/End: Complemental strand, 15800013 - 15799740
Alignment:
Q  21 tagattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaa 120  Q
    ||||||||| |||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15800013 tagattggaaattacgactaagcattatcaatggaattgcaagaggattgctataccttcatgaggattctcgacttagagtaatccacagagatctgaa 15799914  T
Q  121 agccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatgcccgacaaaaacagaa 220  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||| ||||| ||||| | |||||||||| ||    
T  15799913 agccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgataaagaccaatgtcagacaaaaacaaaa 15799814  T
Q  221 agagtttttggcacctagtaag---cattattggaaagt-ttttcaaagcaaatattaaaaaatttcacatgatt 291  Q
    |||||||||||||||||||| |    ||||||||| | | |||||||| |||||| || ||||||||||||||||    
T  15799813 agagtttttggcacctagtatgtgttattattggacactattttcaaa-caaatagtagaaaatttcacatgatt 15799740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 21 - 243
Target Start/End: Complemental strand, 15764564 - 15764342
Alignment:
Q  21 tagattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaa 120  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15764564 tagattggagattacgactaagcattgtcactggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagggatctgaa 15764465  T
Q  121 agccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatgcccgacaaaaacagaa 220  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| || | ||||||| |     
T  15764464 agctagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttgggttagcaaggacatttgaaaaagatcaatgtccaagaaaaacaaat 15764365  T
Q  221 agagtttttggcacctagtaagc 243  Q
    |||||| | || |||||||||||    
T  15764364 agagttatcggaacctagtaagc 15764342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 21 - 302
Target Start/End: Complemental strand, 15813395 - 15813112
Alignment:
Q  21 tagattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaa 120  Q
    ||||||||| | |||||| |||||||||||| ||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15813395 tagattggaaactacgactaagcattatcaaaggaatcgcaagaggacttctataccttcatgaggattctccacttagagtaatccacagagatctgaa 15813296  T
Q  121 agccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatgcccgacaaaaacagaa 220  Q
    ||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| |  ||||| ||| ||    
T  15813295 agcgagcaatgttcttctggatgatgaaatgaatccaaaaatatctgattttggattagcaagggcatttgaaaaagatcaatgtcatacaaagacaaaa 15813196  T
Q  221 agagtttttggcacctagtaagcattattggaaagtttttcaaagcaaata--ttaaaaaatttcacatgattcacaactgaca 302  Q
    |||||| ||||||||||||| |  |||||| ||| | ||| ||| ||||||  ||| |||| || |||||||||||||||||||    
T  15813195 agagttattggcacctagtacgggttattgaaaactcttttaaaacaaatatgttagaaaaatttacatgattcacaactgaca 15813112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 298
Target Start/End: Complemental strand, 15697506 - 15697226
Alignment:
Q  21 tagattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaa 120  Q
    ||||||||| |||||||| ||| |||||||||||||| |||| ||||||  ||||||||||  | ||||||||||||||||| ||||| |||||||||||    
T  15697506 tagattggacattacgactaagtattatcaatggaatcgcaagaggacttttataccttcaccaagattctcgacttagagttatccatagagatctgaa 15697407  T
Q  121 agccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatgcccgacaaaaacagaa 220  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||| | | |||||||||| ||    
T  15697406 agccagcaatgttcttctggatgatgaaatgaatccgaaaatatcagattttggattagcaaggaaatttgaaaaaggtcaaagtcagacaaaaacaaaa 15697307  T
Q  221 agagtttttggcacctagtaag-cattattggaaagt---ttttcaaagcaaatattaaaaaatttcacatgattcacaact 298  Q
    |||||| |||||||||||||||   ||||||| || |   |||||||| ||||||||| |||| ||||||| ||||||||||    
T  15697306 agagttattggcacctagtaagtgtttattggcaactctattttcaaa-caaatattagaaaagttcacataattcacaact 15697226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 303
Target Start/End: Complemental strand, 15703881 - 15703602
Alignment:
Q  23 gattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaaag 122  Q
    ||||||| |||||||   || ||||||||||||||  ||  ||||||  ||||||||||  ||||||||||||||||||| ||||| ||||| || ||||    
T  15703881 gattggacattacgattgagtattatcaatggaat--cacgaggacttttataccttcaccaggattctcgacttagagttatccatagagaccttaaag 15703784  T
Q  123 ccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatgcccgacaaaaacagaaag 222  Q
    || |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||| ||||  ||| | | |||| ||||| ||||    
T  15703783 cctgcaacgttcttctagatgatgaaatgaatccaaaaatatcagattttggattggcaagaaaatttgagaaaggccaaagtcagacagaaacaaaaag 15703684  T
Q  223 agtttttggcacctagtaagcattattggaaagt-ttttcaaagcaaatattaaaaaatttcacatgattcacaactgacag 303  Q
    |||| | || |||||| |||  ||||||  || | |||| ||| ||||||||| ||||||| |||| |||| ||||| ||||    
T  15703683 agttatgggaacctagcaagtgttattgacaactctttttaaaacaaatattagaaaattttacattattcgcaactaacag 15703602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 15722716 - 15722486
Alignment:
Q  21 tagattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaa 120  Q
    ||||||||| ||||| || ||||||| | |||||||| |||| |||||| | |||||| |||||||| |||||||||||||| |||||  ||||||||||    
T  15722716 tagattggaaattacaactaagcattgtaaatggaatcgcaagaggactacaatacctgcatgaggactctcgacttagagtcatccatcgagatctgaa 15722617  T
Q  121 agccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatgcccgacaaaaacagaa 220  Q
    ||||||||| |||||||| ||   |||||||||||||||||||||||||||||| || ||||| | ||||||||  |  | |     |||||||||| ||    
T  15722616 agccagcaacgttcttctggacagtgaaatgaatccaaaaatatcagattttggtttggcaagaaaatttgaaagcggacgaattgagacaaaaacaaaa 15722517  T
Q  221 agagtttttggcacctagtaagcattattgg 251  Q
    |||||| |||| |||||||||| ||||||||    
T  15722516 agagttgttggtacctagtaagtattattgg 15722486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 15712174 - 15711953
Alignment:
Q  21 tagattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaa 120  Q
    ||||||||||  |||||  || ||||||||| || || |||| ||||||| |||| ||||| |||||||||||||||||||| ||||| |||||| ||||    
T  15712174 tagattggagtgtacgattaaacattatcaacgggatagcaagaggactgttatatcttcacgaggattctcgacttagagttatccatagagatatgaa 15712075  T
Q  121 agccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatgcccgacaaaaacagaa 220  Q
    ||| |||||||| ||| | || |||||||||||||||||||||||||| |||||||| ||||| || ||||||||||  ||| | | |||| ||||| ||    
T  15712074 agcaagcaatgtacttttggacgatgaaatgaatccaaaaatatcagactttggattggcaagaaggtttgaaaaaggccaaagtcagacagaaacaaaa 15711975  T
Q  221 agagtttttggcacctagtaag 242  Q
    |||||  | || ||||||||||    
T  15711974 agagtcatgggaacctagtaag 15711953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 15692810 - 15692667
Alignment:
Q  41 agcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctag 140  Q
    ||||||||||||||||| || ||||| ||  ||||||| |||||||| ||| || | |||||||| || |||||||| ||||| |||||||||||  |||    
T  15692810 agcattatcaatggaatagctaaaggtcttttatacctccatgaggactctagattaagagtaattcatagagatctcaaagctagcaatgttctattag 15692711  T
Q  141 atgatgaaatgaatccaaaaatatcagattttggattagcaagg 184  Q
    || ||||||||||||| |||||||||||||||||||| ||||||    
T  15692710 atcatgaaatgaatcccaaaatatcagattttggattggcaagg 15692667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 43 - 204
Target Start/End: Original strand, 3080378 - 3080539
Alignment:
Q  43 cattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctagat 142  Q
    |||||||||||||||||||||||||||  ||||||||||||| || ||| |||||||||||||||| ||||| || ||||| || ||||||||  |||||    
T  3080378 cattatcaatggaattgcaaaaggactcttataccttcatgaagactctagacttagagtaatccatagagacctaaaagcaagtaatgttctattagat 3080477  T
Q  143 gatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatg 204  Q
     | || ||||||||||||||||| ||||||||||| ||||||  |||||||||||| |||||    
T  3080478 caagagatgaatccaaaaatatctgattttggattggcaagggcatttgaaaaagaccaatg 3080539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 21 - 202
Target Start/End: Complemental strand, 4548175 - 4547994
Alignment:
Q  21 tagattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaa 120  Q
    |||||||||  ||| ||| || |||||| ||||||||||||||||||||  | || |||||||| || ||| |||||||||||||||| ||||| || ||    
T  4548175 tagattggaacttaagactaaacattattaatggaattgcaaaaggactcttgtatcttcatgaagactctagacttagagtaatccatagagacctaaa 4548076  T
Q  121 agccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaa 202  Q
    ||| || ||||||||| ||||| | || ||||||||||||||||| ||||||||||| ||||||  ||||||||||| ||||    
T  4548075 agcaagtaatgttcttttagatcaagagatgaatccaaaaatatctgattttggattggcaagggcatttgaaaaaggtcaa 4547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 204
Target Start/End: Original strand, 3094815 - 3094976
Alignment:
Q  43 cattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctagat 142  Q
    |||||||||||||||||||||||||||  | || |||||||| || ||| |||| ||||||||||| ||||| || ||||| || ||||||||  |||||    
T  3094815 cattatcaatggaattgcaaaaggactcttgtatcttcatgaagactctagactaagagtaatccatagagacctaaaagcaagtaatgttctcttagat 3094914  T
Q  143 gatgaaatgaatccaaaaatatcagattttggattagcaaggagatttgaaaaagatcaatg 204  Q
     | || ||||||||||||||||| ||||||||||| ||||||  |||||||||||| |||||    
T  3094915 caagagatgaatccaaaaatatctgattttggattggcaagggcatttgaaaaagaccaatg 3094976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 3102353 - 3102484
Alignment:
Q  44 attatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctagatg 143  Q
    ||||| ||||| ||||| ||||| || ||||| ||||||||||| ||| | || ||||| || |||||||| |||||||| |||||| ||||  |||||     
T  3102353 attattaatgggattgctaaagggcttctatatcttcatgaggactctaggctcagagttattcacagagacctgaaagctagcaatattctattagatc 3102452  T
Q  144 atgaaatgaatccaaaaatatcagattttgga 175  Q
    | ||||||||||||||||| ||||||||||||    
T  3102453 aagaaatgaatccaaaaatctcagattttgga 3102484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 3122480 - 3122620
Alignment:
Q  43 cattatcaatggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctagat 142  Q
    |||||| ||||| ||||| ||||| || || || ||||| ||||| ||| |||| || || || |||||||| ||||||||||||||| || |  |||||    
T  3122480 cattattaatgggattgctaaagggctactctatcttcacgaggactctagactcagggttattcacagagacctgaaagccagcaatattttgttagat 3122579  T
Q  143 gatgaaatgaatccaaaaatatcagattttggattagcaag 183  Q
     ||||||||||||||||||| ||||| |||||| |||||||    
T  3122580 catgaaatgaatccaaaaatttcagactttggactagcaag 3122620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 36370555 - 36370619
Alignment:
Q  110 agagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgg 174  Q
    |||||||| ||||||||||||||||| || |||| |||||||||||| ||||| |||||||||||    
T  36370555 agagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagattttgg 36370619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 36399760 - 36399821
Alignment:
Q  110 agagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattt 171  Q
    |||||||| ||||||||||||||||| || |||| |||||||||||| ||||| ||||||||    
T  36399760 agagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagattt 36399821  T

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Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 36435825 - 36435889
Alignment:
Q  110 agagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgg 174  Q
    |||||||| ||||||||||||||||| || |||| || ||||||||| ||||| |||||||||||    
T  36435825 agagatctaaaagccagcaatgttctccttgatgctgcaatgaatcccaaaatctcagattttgg 36435889  T

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Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 31717667 - 31717739
Alignment:
Q  105 tccacagagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggatt 177  Q
    |||| |||||||| |||  |||||||||| | |||||||||    ||||||||||||||||||||||||||||    
T  31717667 tccatagagatctcaaaagcagcaatgttttactagatgatactttgaatccaaaaatatcagattttggatt 31717739  T

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Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 36376327 - 36376391
Alignment:
Q  110 agagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgg 174  Q
    |||||||| ||||||||||| ||||| || |||| || ||||||||| ||||| |||||||||||    
T  36376327 agagatctaaaagccagcaacgttctcctcgatgctgcaatgaatcccaaaatctcagattttgg 36376391  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 36407217 - 36407281
Alignment:
Q  110 agagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgg 174  Q
    |||||||| ||||||||||||||||| || || | || ||||||||| ||||| |||||||||||    
T  36407217 agagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttgg 36407281  T

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Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 36412340 - 36412404
Alignment:
Q  110 agagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgg 174  Q
    |||||||| ||||||||||||||||| || || | || ||||||||| ||||| |||||||||||    
T  36412340 agagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttgg 36412404  T

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Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 36419371 - 36419443
Alignment:
Q  102 taatccacagagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgg 174  Q
    ||||||| |||||||| ||||||||||| ||||| || |||| || ||||||||| ||||| || ||||||||    
T  36419371 taatccatagagatctaaaagccagcaacgttctccttgatgctgtaatgaatcccaaaatctcggattttgg 36419443  T

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Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 36429372 - 36429436
Alignment:
Q  110 agagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgg 174  Q
    |||||||| ||||||||||| ||||| || |||| || ||||||||| ||||| |||||||||||    
T  36429372 agagatctaaaagccagcaacgttctcctcgatgctgcaatgaatcccaaaatctcagattttgg 36429436  T

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Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 31724911 - 31724964
Alignment:
Q  124 cagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggatt 177  Q
    |||||||||| | |||||||||    ||||||||||||||||||||||||||||    
T  31724911 cagcaatgttttactagatgatactttgaatccaaaaatatcagattttggatt 31724964  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 2662569 - 2662487
Alignment:
Q  93 gacttagagtaatccacagagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgga 175  Q
    |||| ||| |||| || |||||||| ||||| |||||||||||| ||||||  ||||||||||||||||| || || ||||||    
T  2662569 gactaagaataattcatagagatctaaaagcaagcaatgttcttttagatggcgaaatgaatccaaaaatttctgactttgga 2662487  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 2672478 - 2672548
Alignment:
Q  104 atccacagagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgg 174  Q
    |||||||| ||||| || || ||||||||||| || ||| | |||||||||||||| ||||||||||||||    
T  2672478 atccacagggatctcaaggcaagcaatgttctacttgataaagaaatgaatccaaagatatcagattttgg 2672548  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 34192638 - 34192574
Alignment:
Q  104 atccacagagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcaga 168  Q
    |||||||||||||| ||  |||||||| |||||||||| ||  | |||||||| |||||||||||    
T  34192638 atccacagagatctcaagaccagcaatattcttctagacgaaaatatgaatcctaaaatatcaga 34192574  T

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Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 21918037 - 21917947
Alignment:
Q  93 gacttagagtaatccacagagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaag 183  Q
    |||||||||| || ||| ||||| ||||| | |||||  ||||||||||||| || ||| | |||||||| |||||||||||| |||||||    
T  21918037 gacttagagttattcaccgagatttgaaaactagcaacattcttctagatgaggagatgcaaccaaaaatctcagattttggaatagcaag 21917947  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 470110 - 470065
Alignment:
Q  138 tagatgatgaaatgaatccaaaaatatcagattttggattagcaag 183  Q
    |||||||  |||||||||||||||||||||||||||| || |||||    
T  470110 tagatgacaaaatgaatccaaaaatatcagattttggtttggcaag 470065  T

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