View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9756_low_3 (Length: 369)
Name: NF9756_low_3
Description: NF9756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9756_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 20 - 359
Target Start/End: Original strand, 21482926 - 21483265
Alignment:
| Q |
20 |
cgtagatcatataaacaaccaaaacatatgatctaacaataatatacagcttaagtccacaaacctgtctcctatcggatgcacttcgaccctggtgaga |
119 |
Q |
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| T |
21482926 |
cgtagatcatataaacaaccaaaacatataatctaacaataatataaagctgaagtccacaaacctgtctcctatcggatgcacttcgaccctggtgaga |
21483025 |
T |
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| Q |
120 |
actctgtgtctgcatggtggggcggtcacggtccactggaggctgcgtcggctcagccggaacaacaggtgccaaggaagctgctgtcccaccggtcata |
219 |
Q |
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| T |
21483026 |
actctgtgtctgcatggtggggcggtcacggtccactggaggctgcgtcggctcagccggaacaacaggtgccaaggaggctgctgtcccaccggtcata |
21483125 |
T |
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| Q |
220 |
gtctgccaatacatccagttcgctggatttgcatgagaaccaccagcagcaacattggtgcaattatcaccactacctaatctcgcaagtggatcagaac |
319 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
21483126 |
gtctgccaatacatccagttcgctggatttgcatgagaaccaccagcagcaacattggtgcaactatcaccactacctaatctcgcaagtggatcagaac |
21483225 |
T |
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| Q |
320 |
cttgaatattctgatgatggttattattatgatgcctatg |
359 |
Q |
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| T |
21483226 |
cttgaatattctgatgatggttaatattatgatgcctatg |
21483265 |
T |
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