View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9758_low_19 (Length: 305)
Name: NF9758_low_19
Description: NF9758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9758_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 14 - 290
Target Start/End: Complemental strand, 26266565 - 26266305
Alignment:
| Q |
14 |
aatgtaatgaatgaccaagatcatgattcataagcaaattctagggtggagaagaaaaacatatggtccatggtggatcattattttaccctctcacttt |
113 |
Q |
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| T |
26266565 |
aatgtaatgaatgaccaagatcatgattcataagcaaattctagggtggagaagaaaaacatatggtccatggtggatcattattttagcctctcatttt |
26266466 |
T |
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| Q |
114 |
acattgaattataaagtcaacatccaataggtggcggctaatatgattgatgtagcatatgttgagcatcattttttacttttactgtgttatagtacaa |
213 |
Q |
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| T |
26266465 |
acattgaattataaagtcaacatccaata--------------tgattgatgtagcatatgttgagcatcattttttacttttactgtgtta--gtacaa |
26266382 |
T |
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| Q |
214 |
taatacaccaggcatgttaatcttaaacgtttatcacatgtatgcctgaactcctgaagcataattagcttccattt |
290 |
Q |
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| T |
26266381 |
taatacaccaggcatgttaatcttaaacgtttatcacatgtatgcctgaactcctgaagcataattagcttccattt |
26266305 |
T |
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