View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9759_high_6 (Length: 251)
Name: NF9759_high_6
Description: NF9759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9759_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 16557974 - 16558215
Alignment:
| Q |
1 |
aaagatcaaataatgaagttgtttctaaagaaagtgtgagttatgtaaattgaaagatggaacattactaatgctatgctaacattaatggttggaaaat |
100 |
Q |
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| T |
16557974 |
aaagatcaaataatgaagttgtttctaaagaaagtgtgagttatgtaaattgaaagatggaaaattactaatgctatgcgaacattaatggttggaaaat |
16558073 |
T |
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| Q |
101 |
gtttatttagttttcttttatgac-ttttcggagcagggacataggagggcttttaaattgcttgaggaagaatataatgaaaaaattgcgagattagaa |
199 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16558074 |
gtttatttagttttcttttatgactttttcggagcagggacataggagggctttaaaattgcttgaggaagaatataatgaaaaaattgcgagattagaa |
16558173 |
T |
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| Q |
200 |
gctcaagttaagtgagtattgatgcttgtataaacatctctg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||| |||| |
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| T |
16558174 |
gctcaagttaagtgagtattgatgcttgtataaacatttctg |
16558215 |
T |
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