View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9759_high_8 (Length: 238)
Name: NF9759_high_8
Description: NF9759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9759_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 19507659 - 19507446
Alignment:
| Q |
18 |
aatacaccaccaatattattaatctctctagcataactttgaactcatttgagtttcaatatttggaaagacaaattctacaaacaagttgaaatttcag |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
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| T |
19507659 |
aatacaccaccaatattattaatctctctagcataactttgaactcatttgagtttcaatatttggaaagacaaattcaacaaacaagttgaactttcag |
19507560 |
T |
|
| Q |
118 |
aatttagtttcacttgaaggaatatttgacaatgccaggaatatgaatgttcatgaaatagtcctcccagttaatcatttttgggtcaaagtaaaataaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19507559 |
aatttagtttcacttgaaggaatatttgacaatgccaggaatatgaatgttcatgaaatagtcctcccagttaatcatttttgggtcaaagtaaaataaa |
19507460 |
T |
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| Q |
218 |
tccatctctgctcc |
231 |
Q |
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||||||||| |||| |
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| T |
19507459 |
tccatctctactcc |
19507446 |
T |
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