View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9759_low_34 (Length: 230)
Name: NF9759_low_34
Description: NF9759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9759_low_34 |
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Alignment Details
Target: chr4 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 53 - 212
Target Start/End: Complemental strand, 24942901 - 24942742
Alignment:
| Q |
53 |
cagggaatgaatcttgccccaactcaaaacattgtcaatcaccttcgacaaattcatcatttttcttttgaagagtatatcatttatttccagccgaata |
152 |
Q |
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| T |
24942901 |
cagggaatgaatcttgccccaactcaaaacattgtcaatcaccttcgacaaatttatcatttttcctttgaagagtatatcatttattttcatccgaata |
24942802 |
T |
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| Q |
153 |
gaccaagttgctaccaaccatatgatatgaatttcttcgcattttttcctttcaccaacg |
212 |
Q |
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| T |
24942801 |
gaccaagttgctaccaaccatatgagatgaatttcttcacattttttcctttcaccaacg |
24942742 |
T |
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