View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9762_high_11 (Length: 239)
Name: NF9762_high_11
Description: NF9762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9762_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 224
Target Start/End: Complemental strand, 15762617 - 15762401
Alignment:
| Q |
5 |
aattcacatcatttttatcttttaaaattcataagttagttcaaacataataccaatatatatgaagtaacactaacaatgtcatcattttcatgcactt |
104 |
Q |
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| T |
15762617 |
aattcacatcatttttatcttttaaaattcataagttagttcaaacataataccaatatatatgaagtaacactaacaatgtcatcattttcatgcactt |
15762518 |
T |
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| Q |
105 |
tcaacagtaaagtttgaccttttaagatgcagagaacctttgtttttagggattttgatggacgttccaccattattcttataaactctttaacacggta |
204 |
Q |
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| T |
15762517 |
tcaacggtaaagtttgaccttttaagatgcagagaaccttcgtttttagggattttgatg---cttccaccattattcttataaactctttaacacggta |
15762421 |
T |
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| Q |
205 |
aagatattccgaatggaatg |
224 |
Q |
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| T |
15762420 |
aagatattccgaatggaatg |
15762401 |
T |
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