View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9764_low_9 (Length: 259)

Name: NF9764_low_9
Description: NF9764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9764_low_9
NF9764_low_9
[»] chr5 (25 HSPs)
chr5 (17-248)||(38452573-38452805)
chr5 (57-248)||(38220590-38220780)
chr5 (17-248)||(38182264-38182495)
chr5 (17-248)||(38188636-38188867)
chr5 (17-248)||(38209490-38209721)
chr5 (17-248)||(38215861-38216092)
chr5 (17-248)||(38170105-38170337)
chr5 (17-248)||(38185894-38186124)
chr5 (17-248)||(38212233-38212463)
chr5 (17-248)||(38156193-38156421)
chr5 (17-167)||(38220223-38220373)
chr5 (57-167)||(38220372-38220482)
chr5 (57-167)||(38220481-38220591)
chr5 (17-117)||(38443753-38443853)
chr5 (66-120)||(38443718-38443772)
chr5 (66-121)||(38170070-38170125)
chr5 (66-121)||(38220188-38220243)
chr5 (187-244)||(38443919-38443973)
chr5 (66-121)||(38452785-38452840)
chr5 (85-121)||(38182475-38182511)
chr5 (85-121)||(38185878-38185914)
chr5 (85-121)||(38188620-38188656)
chr5 (85-121)||(38209701-38209737)
chr5 (85-121)||(38212443-38212479)
chr5 (85-121)||(38215845-38215881)


Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 38452805 - 38452573
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  38452805 aatttgaagatattctaaaattgtatttgacgtgcaatttttccaaggtgaaggattttcacggactacatgtcgtgaatgatgaattcgaagatattct 38452706  T
Q  117 aaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaa-ttttcttttgaagtgtagtcaaattgtacggattcaaattgattaatata 215  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  38452705 aaaatcgttttggaagcgttgctttttgaagcctaatgtagttctctaattttttttttgaagtgtagttaaattgtacggattcaaattgattaatata 38452606  T
Q  216 ttggttcttttttatcatggatttgtctcctat 248  Q
    |||||||||||||||||||||||||||||||||    
T  38452605 ttggttcttttttatcatggatttgtctcctat 38452573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 57 - 248
Target Start/End: Original strand, 38220590 - 38220780
Alignment:
Q  57 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  38220590 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcgttttggaagtgttgctttttgaaacctaatgta 38220689  T
Q  157 gttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttcttttttatcatggatttgtctcctat 248  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38220690 gttctctaattttcttttgaagtgtagtc-aattgtacggattcaaattgattaatatattggttctattttatcatggatttgtctcctat 38220780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 38182495 - 38182264
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| |||||||||||    
T  38182495 aatttgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattct 38182396  T
Q  117 aaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatat 216  Q
    |||||| ||||||||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||    
T  38182395 aaaatcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacat 38182296  T
Q  217 tggttcttttttatcatggatttgtctcctat 248  Q
    ||||||||||||||||||||||||||||||||    
T  38182295 tggttcttttttatcatggatttgtctcctat 38182264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 38188636 - 38188867
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| |||||||||||    
T  38188636 aatttgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattct 38188735  T
Q  117 aaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatat 216  Q
    |||||| ||||||||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||    
T  38188736 aaaatcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacat 38188835  T
Q  217 tggttcttttttatcatggatttgtctcctat 248  Q
    ||||||||||||||||||||||||||||||||    
T  38188836 tggttcttttttatcatggatttgtctcctat 38188867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 38209721 - 38209490
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| |||||||||||    
T  38209721 aatttgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattct 38209622  T
Q  117 aaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatat 216  Q
    |||||| ||||||||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||    
T  38209621 aaaatcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacat 38209522  T
Q  217 tggttcttttttatcatggatttgtctcctat 248  Q
    ||||||||||||||||||||||||||||||||    
T  38209521 tggttcttttttatcatggatttgtctcctat 38209490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 38215861 - 38216092
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    |||||||||||||||||||||| ||||||| | ||||||||| ||||| |||||| ||||| ||||||||||||||||| |||||||| |||||||||||    
T  38215861 aatttgaagatattctaaaattatatttgaagcgcaatttttttaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattct 38215960  T
Q  117 aaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatat 216  Q
    |||||| ||||||||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||    
T  38215961 aaaatcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacat 38216060  T
Q  217 tggttcttttttatcatggatttgtctcctat 248  Q
    ||||||||||||||||||||||||||||||||    
T  38216061 tggttcttttttatcatggatttgtctcctat 38216092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 38170105 - 38170337
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38170105 aatttgaagatattctaaaattgtatttgacgtgcaatttttccaaggtgaaggattttcacggactgcatgtcgtgaatgatgaattcgaagatattct 38170204  T
Q  117 aaaatctttttggaagcgttgctttttgaaacctaatgtagttcact-aattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatata 215  Q
    |||||| |||||||||| ||||||||||||  |||||||||||| || ||       |||||||||||| ||||||||||||||||||||||||||||||    
T  38170205 aaaatcgttttggaagcattgctttttgaaggctaatgtagttctctaaaaaaaaaattgaagtgtagttaaattgtacggattcaaattgattaatata 38170304  T
Q  216 ttggttcttttttatcatggatttgtctcctat 248  Q
    |||||||| ||||||||||||||||||||||||    
T  38170305 ttggttctattttatcatggatttgtctcctat 38170337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 38185894 - 38186124
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||| |||||||||||    
T  38185894 aatttgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcacggactg-atgtcgtgaacgatgaatttgaagatattct 38185992  T
Q  117 aaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatat 216  Q
    |||||  ||||||||||||||||||||||| |||||| || ||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||    
T  38185993 aaaattgttttggaagcgttgctttttgaagcctaatataattttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacat 38186092  T
Q  217 tggttcttttttatcatggatttgtctcctat 248  Q
    ||||||||||||||||||||||||||||||||    
T  38186093 tggttcttttttatcatggatttgtctcctat 38186124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 38212463 - 38212233
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||| |||||||||||    
T  38212463 aatttgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcacggactg-atgtcgtgaacgatgaatttgaagatattct 38212365  T
Q  117 aaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatat 216  Q
    |||||  ||||||||||||||||||||||| |||||| || ||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||    
T  38212364 aaaattgttttggaagcgttgctttttgaagcctaatataattttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacat 38212265  T
Q  217 tggttcttttttatcatggatttgtctcctat 248  Q
    ||||||||||||||||||||||||||||||||    
T  38212264 tggttcttttttatcatggatttgtctcctat 38212233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 38156193 - 38156421
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||  |||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  38156193 aatttgaagatattctaaaattgtttttgaagcgcaatttttctaagaagaaggaatttcatggacttcatgttgtgaatgatgaattcgaagatattct 38156292  T
Q  117 aaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatat 216  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||   | ||||| ||||||||| || ||||||||    
T  38156293 aaaatcgttttggaagcgttgctttttgaagcctaatgtagttctctaatttttttttgaagtgtagt--tactgtacagattcaaatcgagtaatatat 38156390  T
Q  217 tggttcttttttatcatggatttgtctcctat 248  Q
    |||||| |||||||||||||||||||||||||    
T  38156391 tggttc-tttttatcatggatttgtctcctat 38156421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 38220223 - 38220373
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38220223 aatttgaagatattctaaaattttatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 38220322  T
Q  117 aaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaatt 167  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  38220323 aaaatcgttttggaagtgttgctttttgaaacctaatgtagttctctaatt 38220373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 38220372 - 38220482
Alignment:
Q  57 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  38220372 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcgttttggaagtgttgctttttgaaacctaatgta 38220471  T
Q  157 gttcactaatt 167  Q
    |||| ||||||    
T  38220472 gttctctaatt 38220482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 38220481 - 38220591
Alignment:
Q  57 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  38220481 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcattttggaagtgttgctttttgaaacctaatgta 38220580  T
Q  157 gttcactaatt 167  Q
    |||| ||||||    
T  38220581 gttctctaatt 38220591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 38443753 - 38443853
Alignment:
Q  17 aatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattct 116  Q
    |||||||||||||||||||| ||| ||||| | | |||||||| |||  |||||||||||| ||||| ||  ||||||| ||||||||||||||||||||    
T  38443753 aatttgaagatattctaaaactgtttttgaagcgtaatttttcaaagaagaaggaatttcatggactacacatcgtgaacgatgaattcgaagatattct 38443852  T
Q  117 a 117  Q
    |    
T  38443853 a 38443853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 38443718 - 38443772
Alignment:
Q  66 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa 120  Q
    |||| ||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  38443718 gaagcaatttcatggactgcatatcgtgaatgatgaatttgaagatattctaaaa 38443772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 38170070 - 38170125
Alignment:
Q  66 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaat 121  Q
    |||| |||||| |||||| ||||| |||||||||||||| ||||||||||||||||    
T  38170070 gaagaaatttcgcggactacatgttgtgaatgatgaatttgaagatattctaaaat 38170125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 38220188 - 38220243
Alignment:
Q  66 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaat 121  Q
    |||| |||||| |||||| |||||  ||||||||||||| ||||||||||||||||    
T  38220188 gaagaaatttcgcggactacatgttatgaatgatgaatttgaagatattctaaaat 38220243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 38443919 - 38443973
Alignment:
Q  187 aattgtacggattcaaattgattaatatattggttcttttttatcatggatttgtctc 244  Q
    ||||||| ||||||||||| |||||||||||||   ||||||||||||||| ||||||    
T  38443919 aattgtatggattcaaatttattaatatattgg---ttttttatcatggatctgtctc 38443973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 38452840 - 38452785
Alignment:
Q  66 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaat 121  Q
    |||| |||||| |||||| |||||  ||||||||||||| ||||||||||||||||    
T  38452840 gaagaaatttcgcggactacatgttatgaatgatgaatttgaagatattctaaaat 38452785  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 38182511 - 38182475
Alignment:
Q  85 catgtcgtgaatgatgaattcgaagatattctaaaat 121  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38182511 catgttgtgaatgatgaatttgaagatattctaaaat 38182475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 38185878 - 38185914
Alignment:
Q  85 catgtcgtgaatgatgaattcgaagatattctaaaat 121  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38185878 catgttgtgaatgatgaatttgaagatattctaaaat 38185914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 38188620 - 38188656
Alignment:
Q  85 catgtcgtgaatgatgaattcgaagatattctaaaat 121  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38188620 catgttgtgaatgatgaatttgaagatattctaaaat 38188656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 38209737 - 38209701
Alignment:
Q  85 catgtcgtgaatgatgaattcgaagatattctaaaat 121  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38209737 catgttgtgaatgatgaatttgaagatattctaaaat 38209701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 38212479 - 38212443
Alignment:
Q  85 catgtcgtgaatgatgaattcgaagatattctaaaat 121  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38212479 catgttgtgaatgatgaatttgaagatattctaaaat 38212443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 38215845 - 38215881
Alignment:
Q  85 catgtcgtgaatgatgaattcgaagatattctaaaat 121  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38215845 catgttgtgaatgatgaatttgaagatattctaaaat 38215881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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