View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9766_high_2 (Length: 474)
Name: NF9766_high_2
Description: NF9766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9766_high_2 |
 |  |
|
| [»] scaffold0057 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 8 - 456
Target Start/End: Complemental strand, 13274003 - 13273552
Alignment:
| Q |
8 |
ttggtgtttgagtaaataaagaatggcaatcaaatgtcgctgaatatatagacaacggatcttgttaacgagttccttcgacacactattcaaacaattt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13274003 |
ttggtgtttgagtaaataaagaatggcaatcaaatgtcgcggaatatatagacaacggatcttgttaacgagttccttcgacacactatttaaacaattt |
13273904 |
T |
 |
| Q |
108 |
aaattaataaaaagatgttatttatctttttaaagagtgttcgaagacaaccgttagcattctttaaagagtgttcaaagctaataatgccacttttgtg |
207 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
13273903 |
aaattaataaaaatatgttatttatctttttaaagagtgttcaaagacaactgttagcattctttaaagagtgttgaaagttaataatgccacttttgtg |
13273804 |
T |
 |
| Q |
208 |
tatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctttatttgtatatatattgtattgacggtttgtttcttggggtg |
307 |
Q |
| |
|
|| |||||| ||||| ||||| ||| | ||||||||||||| |||||||||||| || ||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
13273803 |
tacggttcacagagatagtggttggaacaattgatttgtttgggtatcaactgaccattgtttatatatacattgtattgacggtttgtttcttggggt- |
13273705 |
T |
 |
| Q |
308 |
ggttccctaggacaccttatactgaggaacgtttaccaccattgttaatatatttcattttagttt----nnnnnnnnnnnnnttgacaagctgagctaa |
403 |
Q |
| |
|
|||||||| | ||||||| ||||||||||| ||||| || ||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
13273704 |
ggttccctggtacaccttgtactgaggaacaattaccgccgttgttaatatatttcattttagtttcttaaaaataaaaaaaattgactagctgagctaa |
13273605 |
T |
 |
| Q |
404 |
atttgtgacaactaagacccatataagccacaaaaactactggcctacgaaat |
456 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
13273604 |
gtttgtgacaactaagacccatataagccacaaaaactactagcctacgaaat |
13273552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 220 - 373
Target Start/End: Original strand, 38204383 - 38204537
Alignment:
| Q |
220 |
agatggtggtcggaccttttgatttgtttggatatcaactgaccttt-atttgtatatatattgtattgacggtttgtttcttggggtgggttccctagg |
318 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| ||| ||||| |||||||||||| |||||||||| |||| |||||||||||||||| || | |
|
|
| T |
38204383 |
agatggtggtcggaccctttgatttgtttgggtatcgactagcctttgatttgtatatattttgtattgacactttggttcttggggtgggttctctggt |
38204482 |
T |
 |
| Q |
319 |
acaccttatactgaggaacgtttaccaccattgttaatatatttcattttagttt |
373 |
Q |
| |
|
||||||| |||||||| || ||||||| | || ||||||||| |||||||||||| |
|
|
| T |
38204483 |
acaccttctactgagggacctttaccatcgttattaatatatctcattttagttt |
38204537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 15283314 - 15283359
Alignment:
| Q |
219 |
gagatggtggtcggaccttttgatttgtttggatatcaactgacct |
264 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| |||||||| |
|
|
| T |
15283314 |
gagatggtggtcggaccccttgacttgtttggatatcgactgacct |
15283359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 32888347 - 32888279
Alignment:
| Q |
187 |
gctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatc |
255 |
Q |
| |
|
||||||||||| |||||||||| ||||| |||||||||||| |||| |||| ||||||||| |||| |
|
|
| T |
32888347 |
gctaataatgcaacttttgtgtttggttgttagagatggtggtcagaccctttgttttgtttgggtatc |
32888279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 86; Significance: 6e-41; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 184 - 373
Target Start/End: Original strand, 22179459 - 22179648
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctttatttgtatatatattgt |
283 |
Q |
| |
|
||||||||||||| || |||| ||| ||||| |||||||| |||||||| ||| |||||||||| |||| |||||||||| |||||||||| ||| | |
|
|
| T |
22179459 |
aaagctaataatgtcatgtttgagtacggttctcagagatggtagtcggaccatttaatttgtttgggtatcgactgacctttgtttgtatatacattat |
22179558 |
T |
 |
| Q |
284 |
attgacggtttgtttcttggggtgggttccctaggacaccttatactgaggaacgtttaccaccattgttaatatatttcattttagttt |
373 |
Q |
| |
|
| |||| ||||||||||||||||||||||| ||| || |||||||||||||||||||||||||| | | |||||||| ||||||||||| |
|
|
| T |
22179559 |
agtgacagtttgtttcttggggtgggttccttagtactccttatactgaggaacgtttaccaccgatttaaatatattccattttagttt |
22179648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 184 - 373
Target Start/End: Original strand, 5909543 - 5909733
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgaccttt-atttgtatatatattg |
282 |
Q |
| |
|
||||| ||||| |||||||||||||| | ||| ||||||||||||||||| |||||||||||||| |||||||| |||||| |||||||||| ||| |
|
|
| T |
5909543 |
aaagcaaataacgccacttttgtgtacgattctcagagatggtggtcggaccctttgatttgtttgggtatcaactaacctttgttttgtatatactttg |
5909642 |
T |
 |
| Q |
283 |
tattgacggtttgtttcttggggtgggttccctaggacaccttatactgaggaacgtttaccaccattgttaatatatttcattttagttt |
373 |
Q |
| |
|
| |||||||||||||| |||||||| ||| | | | ||||||| ||||| ||||| | |||| || |||||||||||| ||||||||||| |
|
|
| T |
5909643 |
tcttgacggtttgttttttggggtgagtttcttggtacaccttgtactggggaacctctaccgccgttgttaatatatcccattttagttt |
5909733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 24177273 - 24177187
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctttattt |
270 |
Q |
| |
|
|||||||| || ||||||||| |||||||||| ||||||||||| |||| ||| |||| ||||||||| |||||||||||||| |
|
|
| T |
24177273 |
aaagctaacaaagccacttttatgtatggttctcagagatggtggttggactcgttgttttgcttggatatcgactgacctttattt |
24177187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 27679680 - 27679765
Alignment:
| Q |
187 |
gctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctttatttgt |
272 |
Q |
| |
|
|||||||||| |||||||||||| ||||| || |||||||||||||| | || | ||||||| |||| || ||||||| ||||| |
|
|
| T |
27679680 |
gctaataatgtcacttttgtgtacggttctcagaaatggtggtcggaccctatgctatgtttgggtatcgaccgacctttgtttgt |
27679765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 373
Target Start/End: Original strand, 30802254 - 30802443
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctttatttgtatatatattgt |
283 |
Q |
| |
|
||||||||||| ||||| |||||||| ||||| |||| |||||||||||| |||||||||||||| |||| ||| |||||| ||| ||||| |||| |
|
|
| T |
30802254 |
aaagctaataacgccacgtttgtgtacggttctcagagacggtggtcggaccctttgatttgtttgggtatcgactaacctttgttttcatatactttgt |
30802353 |
T |
 |
| Q |
284 |
attgacggtttgtttcttggggtgggttccctaggacaccttatactgaggaacgtttaccaccattgttaatatatttcattttagttt |
373 |
Q |
| |
|
|||||| |||||||| |||||||| ||| | | | ||||||| ||||| ||||| | |||| || |||||||||||| |||||||||||| |
|
|
| T |
30802354 |
attgacagtttgttttttggggtgagtttcttggtacaccttgtactggggaacctctaccgccgttgttaatatatctcattttagttt |
30802443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 373
Target Start/End: Complemental strand, 19512078 - 19511888
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctttattt-gtatatatattg |
282 |
Q |
| |
|
||||||||||| | || |||||||| ||||| ||||||||||||||||| | ||| |||||||| |||| | | |||||| ||| ||||||| ||| |
|
|
| T |
19512078 |
aaagctaataacgtcatgtttgtgtacggttctcagagatggtggtcggaccctatgaattgtttgggtatcgaataacctttgttttgtatatactttg |
19511979 |
T |
 |
| Q |
283 |
tattgacggtttgtttcttggggtgggttccctaggacaccttatactgaggaacgtttaccaccattgttaatatatttcattttagttt |
373 |
Q |
| |
|
||||||||||| |||| |||||||| ||| | | | ||||||| ||||| ||| | |||| || |||||||||||| | |||||||||| |
|
|
| T |
19511978 |
tattgacggttagttttttggggtgagtttcttggtacaccttgtactggaaaacctctaccgccgttgttaatatatcttattttagttt |
19511888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 34103139 - 34103053
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctttattt |
270 |
Q |
| |
|
||||| |||||||||| |||||||| || || ||||||||||||||||| ||| ||| ||||| |||| |||||||||||||| |
|
|
| T |
34103139 |
aaagccaataatgccaattttgtgtgcgggtcgcagagatggtggtcggaccatttactttatttgggtatcgactgacctttattt |
34103053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 33822005 - 33822081
Alignment:
| Q |
187 |
gctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacc |
263 |
Q |
| |
|
|||||||||| |||||| |||| ||||| ||||||| |||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
33822005 |
gctaataatgtcactttcatgtacggttctcatagatggtagtcggaccctttgatttgtttgggtatcgactgacc |
33822081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 64; Significance: 9e-28; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 202 - 373
Target Start/End: Original strand, 32348806 - 32348977
Alignment:
| Q |
202 |
tttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctttatttgtatatatattgtattgacggtttgtttctt |
301 |
Q |
| |
|
|||||||| ||||| ||||||||||||||| | |||||||||||||| |||| ||| |||||| |||||||||| ||||||||||||||||||| || |
|
|
| T |
32348806 |
tttgtgtacggttctcagagatggtggtcggatcctttgatttgtttgggtatcgactaacctttgtttgtatatactttgtattgacggtttgtttttt |
32348905 |
T |
 |
| Q |
302 |
ggggtgggttccctaggacaccttatactgaggaacgtttaccaccattgttaatatatttcattttagttt |
373 |
Q |
| |
|
|||||| ||| | | | ||||||| ||||| | ||| | |||| || |||||||||||| ||||||||||| |
|
|
| T |
32348906 |
ggggtgagtttcttggtacaccttgtactgggaaacctctaccgccgttgttaatatatcccattttagttt |
32348977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 48029274 - 48029228
Alignment:
| Q |
220 |
agatggtggtcggaccttttgatttgtttggatatcaactgaccttt |
266 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||||||||||||| |
|
|
| T |
48029274 |
agatggtggtcggaccatttgttttgtttgggtatcaactgaccttt |
48029228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 56337978 - 56338058
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacct |
264 |
Q |
| |
|
|||||||| |||||||||||||| |||||||| |||||||||| ||||| ||| ||||||||| |||| |||||||| |
|
|
| T |
56337978 |
aaagctaacaatgccacttttgtttatggttctcaaagatggtggttggaccggttgctttgtttgggtatcgactgacct |
56338058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 55261650 - 55261564
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctttattt |
270 |
Q |
| |
|
|||||||| || |||||||||||||||||||| ||||||||||| ||||| || |||| ||| |||| |||||||||||||| |
|
|
| T |
55261650 |
aaagctaacaaagccacttttgtgtatggttctcagagatggtggttggacccgttactttgactgggtatcgactgacctttattt |
55261564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 263
Target Start/End: Complemental strand, 34104992 - 34104919
Alignment:
| Q |
190 |
aataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacc |
263 |
Q |
| |
|
||||||||| |||||| |||||||| ||||||||||||||||| |||| | ||||||| |||| ||||||| |
|
|
| T |
34104992 |
aataatgcctgttttgtatatggttctcagagatggtggtcggaccctttgttatgtttgggtatcgactgacc |
34104919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 53569652 - 53569591
Alignment:
| Q |
201 |
ttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgac |
262 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| ||| ||||||||| ||||||||||| |
|
|
| T |
53569652 |
ttttgtgtacggttctcagagatggtggtcggaccctttactttgtttgggtatcaactgac |
53569591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 54; Significance: 8e-22; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 44941294 - 44941422
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctttatttgtatatatattgt |
283 |
Q |
| |
|
|||||||| |||| ||| |||||||| |||||| ||||||||||||||| | |||||| |||||| |||||||| ||| || |||||||||| |||| |
|
|
| T |
44941294 |
aaagctaacaatgtcacatttgtgtacggttcacagagatggtggtcggatcctttgatgtgtttgagtatcaactaacc-ttctttgtatatactttgt |
44941392 |
T |
 |
| Q |
284 |
attgacggtttgtttcttggggtgggttcc |
313 |
Q |
| |
|
||| |||||||| ||||||||||||||||| |
|
|
| T |
44941393 |
attaacggtttggttcttggggtgggttcc |
44941422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 18634625 - 18634543
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgaccttt |
266 |
Q |
| |
|
|||||||||||| |||| ||||||||||| || ||||||||||||||||| |||| | |||||||| |||||| ||||||| |
|
|
| T |
18634625 |
aaagctaataataccacgtttgtgtatggctctcagagatggtggtcggaccctttgttatgtttggacatcaaccgaccttt |
18634543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 31265885 - 31265804
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgacctt |
265 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||| |||||||||||||||| ||| ||||||||| |||||||||||||| |
|
|
| T |
31265885 |
aaagctcataataccacttttgtgtatgattctcaaagatggtggtcggaccctttactttgtttgggtatcaactgacctt |
31265804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 33280713 - 33280670
Alignment:
| Q |
220 |
agatggtggtcggaccttttgatttgtttggatatcaactgacc |
263 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||| ||||||| |
|
|
| T |
33280713 |
agatggtggtcggacctgttgctttgtttggatatcgactgacc |
33280670 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 31706431 - 31706305
Alignment:
| Q |
184 |
aaagctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgaccttt-at--ttgtatatatat |
280 |
Q |
| |
|
||||||||||||||||| ||||||| || || ||||||||||||||||||||| ||||||||| |||| |||||||||| || |||||||||| | |
|
|
| T |
31706431 |
aaagctaataatgccacgtttgtgtgcggctctcagagatggtggtcggaccttttaatttgtttgagtatcgactgacctttgatccttgtatatattt |
31706332 |
T |
 |
| Q |
281 |
tgtattgacggtttgtttcttggggtgg |
308 |
Q |
| |
|
|||| |||| ||||||| ||||||||| |
|
|
| T |
31706331 |
tgta-tgacattttgttttttggggtgg |
31706305 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 6937050 - 6936970
Alignment:
| Q |
186 |
agctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgaccttt |
266 |
Q |
| |
|
||||||||| |||| ||||||||| ||||| ||||||| |||| |||| | |||||||||||| |||| |||||||||| |
|
|
| T |
6937050 |
agctaataacgccatttttgtgtacggttctcagagatggcggtcagaccctatgatttgtttgggtatcgactgaccttt |
6936970 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 14586091 - 14586152
Alignment:
| Q |
188 |
ctaataatgccacttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttg |
249 |
Q |
| |
|
||||||||||||| |||||||||||| | ||||||||||||||| | |||| |||||||| |
|
|
| T |
14586091 |
ctaataatgccacatttgtgtatggtgcttagagatggtggtcggatcctttgctttgtttg |
14586152 |
T |
 |
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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 3430 - 3495
Alignment:
| Q |
201 |
ttttgtgtatggttcagtgagatggtggtcggaccttttgatttgtttggatatcaactgaccttt |
266 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||| |
|
|
| T |
3430 |
ttttgtttatggttcacatagatggtggtcggacccgttgatttgtttgggtatcgactgaccttt |
3495 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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