View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9766_low_30 (Length: 215)
Name: NF9766_low_30
Description: NF9766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9766_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 22985332 - 22985204
Alignment:
| Q |
12 |
agatgaagttcatgatcatgtgccaagtttgataggaagtatatttcttcaatttgctgaatcaatggagactaatcccaatcataaaaggttggtcatg |
111 |
Q |
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| T |
22985332 |
agatgaagttcatgatcatgtgccaagtttgataggaagtatatttcttcaatttgctgaatcaatggagactaatcccaatcataaaaggttggtcatg |
22985233 |
T |
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| Q |
112 |
tcgtaaatctacttaattaaatctatcaa |
140 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
22985232 |
tcgtaaatctacttaattaaatctatcaa |
22985204 |
T |
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