View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9767_high_3 (Length: 300)
Name: NF9767_high_3
Description: NF9767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9767_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 53096042 - 53095760
Alignment:
| Q |
1 |
tattctgtagaatttcaacttcttgtccttgtccttgtcggctggaggtaacgggttaaaggttgaagactgttttaccaaaggtggaagtaggaggtta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
53096042 |
tattctgtagaatttcaacttcttgtccttgtccttgtcggctggaggtaacgggttaaaggttgaagactgttttaccaaaggtggaattaggaggtta |
53095943 |
T |
|
| Q |
101 |
gaacagttctcaaaatgtcaagtgccttattttcggtctatacagcagcagcatgggctcatgccaataccaacaactccaccaaatcagtatacctcaa |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53095942 |
gaacagttctcaaaatctcaagtgccttattttcggtctatacaacagcagcatgggctcatgccaataccaacaactccaccaaatcagtatacctcaa |
53095843 |
T |
|
| Q |
201 |
cttcttacattgatcagcttcctgctgcaggaccacaggtttaaatctttctcactatggactcctatgatgttatattaatg |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
53095842 |
cttcttacattgatcagcttcctgctgcaggaccacaggtttaaatctttctcactatagactcctatgatgttatattaatg |
53095760 |
T |
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