View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9767_low_1 (Length: 642)

Name: NF9767_low_1
Description: NF9767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9767_low_1
NF9767_low_1
[»] chr1 (70 HSPs)
chr1 (214-626)||(3340307-3340719)
chr1 (214-626)||(2948287-2948699)
chr1 (214-626)||(3349181-3349593)
chr1 (214-626)||(9818729-9819141)
chr1 (1-144)||(13137803-13137945)
chr1 (1-149)||(50166997-50167144)
chr1 (1-149)||(40122018-40122165)
chr1 (1-144)||(4552471-4552613)
chr1 (1-144)||(30476269-30476411)
chr1 (1-149)||(833987-834134)
chr1 (1-145)||(1833712-1833855)
chr1 (1-149)||(50169032-50169179)
chr1 (1-149)||(196727-196874)
chr1 (1-149)||(45644175-45644323)
chr1 (1-149)||(28265376-28265523)
chr1 (1-140)||(28223248-28223386)
chr1 (1-149)||(3846938-3847088)
chr1 (1-144)||(28220049-28220191)
chr1 (1-131)||(3157068-3157199)
chr1 (1-149)||(8550601-8550749)
chr1 (1-149)||(10925425-10925573)
chr1 (1-149)||(49918553-49918701)
chr1 (5-149)||(23555088-23555231)
chr1 (1-132)||(41361114-41361245)
chr1 (226-412)||(4323147-4323333)
chr1 (1-149)||(16455820-16455967)
chr1 (1-149)||(3189534-3189695)
chr1 (1-149)||(3198351-3198512)
chr1 (1-149)||(3207190-3207351)
chr1 (1-144)||(37559687-37559831)
chr1 (218-626)||(3361521-3361926)
chr1 (1-165)||(20762876-20763037)
chr1 (1-149)||(31659441-31659589)
chr1 (1-149)||(44455363-44455511)
chr1 (1-124)||(46065117-46065238)
chr1 (1-131)||(927817-927945)
chr1 (1-149)||(8870544-8870692)
chr1 (1-149)||(13659168-13659305)
chr1 (1-149)||(37503379-37503522)
chr1 (224-416)||(3372499-3372691)
chr1 (5-165)||(13316151-13316312)
chr1 (224-416)||(6601788-6601977)
chr1 (7-124)||(15820512-15820623)
chr1 (1-165)||(51765603-51765766)
chr1 (329-407)||(3378648-3378726)
chr1 (224-416)||(6592536-6592725)
chr1 (347-412)||(4335037-4335102)
chr1 (547-624)||(2006580-2006657)
chr1 (367-416)||(3218549-3218598)
chr1 (369-416)||(2006414-2006461)
chr1 (369-416)||(2010503-2010550)
chr1 (369-416)||(2019716-2019763)
chr1 (73-123)||(36683885-36683935)
chr1 (95-165)||(40282680-40282749)
chr1 (214-306)||(2006253-2006345)
chr1 (541-597)||(6601625-6601681)
chr1 (582-622)||(9820163-9820203)
chr1 (95-127)||(20622071-20622103)
chr1 (106-166)||(21536797-21536857)
chr1 (547-594)||(3378863-3378910)
chr1 (93-166)||(775482-775553)
chr1 (379-416)||(2011923-2011960)
chr1 (547-588)||(2012073-2012114)
chr1 (501-594)||(3372773-3372866)
chr1 (95-143)||(9987502-9987551)
chr1 (95-143)||(21054258-21054307)
chr1 (547-591)||(2010663-2010707)
chr1 (547-591)||(2019876-2019920)
chr1 (218-306)||(3218662-3218750)
chr1 (541-597)||(6592370-6592426)
[»] chr8 (40 HSPs)
chr8 (1-144)||(43036626-43036768)
chr8 (1-166)||(40321279-40321443)
chr8 (1-149)||(30143543-30143691)
chr8 (1-149)||(41366435-41366582)
chr8 (1-166)||(5689470-5689636)
chr8 (1-149)||(6599172-6599316)
chr8 (1-149)||(6674625-6674769)
chr8 (1-165)||(42498398-42498562)
chr8 (1-149)||(1345193-1345340)
chr8 (1-149)||(18105893-18106040)
chr8 (1-149)||(12702448-12702599)
chr8 (1-149)||(4731861-4732009)
chr8 (1-132)||(19491536-19491667)
chr8 (1-144)||(15212989-15213132)
chr8 (1-124)||(10015278-10015401)
chr8 (1-149)||(27811481-27811631)
chr8 (1-149)||(44304059-44304206)
chr8 (1-148)||(34254149-34254295)
chr8 (5-147)||(17982861-17983002)
chr8 (1-144)||(3303493-3303639)
chr8 (1-149)||(4733909-4734058)
chr8 (1-162)||(34256309-34256471)
chr8 (1-123)||(1292311-1292433)
chr8 (1-144)||(4743050-4743183)
chr8 (5-149)||(1746036-1746179)
chr8 (1-149)||(33352353-33352501)
chr8 (1-89)||(18142017-18142105)
chr8 (5-165)||(19945158-19945319)
chr8 (16-165)||(31218475-31218625)
chr8 (3-126)||(3050963-3051090)
chr8 (1-165)||(8153986-8154147)
chr8 (67-149)||(8965509-8965588)
chr8 (1-124)||(32902028-32902150)
chr8 (93-165)||(7493284-7493352)
chr8 (1-50)||(30291807-30291856)
chr8 (1-131)||(3073712-3073843)
chr8 (95-143)||(2628037-2628084)
chr8 (25-132)||(4162692-4162800)
chr8 (98-132)||(6127875-6127909)
chr8 (1-125)||(29796169-29796291)
[»] chr2 (52 HSPs)
chr2 (1-149)||(723564-723711)
chr2 (1-149)||(34139590-34139737)
chr2 (1-130)||(39285038-39285167)
chr2 (1-149)||(14633645-14633792)
chr2 (1-131)||(11067504-11067634)
chr2 (1-149)||(33162271-33162419)
chr2 (1-149)||(2334235-2334382)
chr2 (1-149)||(42362549-42362696)
chr2 (1-149)||(36987892-36988040)
chr2 (1-149)||(24885789-24885936)
chr2 (1-144)||(29868072-29868214)
chr2 (1-144)||(36317836-36317978)
chr2 (214-594)||(20923276-20923653)
chr2 (1-165)||(14202224-14202388)
chr2 (1-149)||(36773761-36773909)
chr2 (1-149)||(38312443-38312591)
chr2 (1-140)||(11151422-11151560)
chr2 (1-149)||(6594821-6594969)
chr2 (1-149)||(17057186-17057334)
chr2 (1-149)||(17085169-17085317)
chr2 (5-150)||(11049757-11049896)
chr2 (1-125)||(2838149-2838273)
chr2 (219-431)||(39273853-39274065)
chr2 (5-166)||(36205463-36205625)
chr2 (5-165)||(45099962-45100122)
chr2 (1-165)||(5723056-5723220)
chr2 (1-144)||(11690701-11690833)
chr2 (1-166)||(4484127-4484292)
chr2 (1-166)||(4502932-4503097)
chr2 (224-412)||(20926884-20927073)
chr2 (550-626)||(20927202-20927278)
chr2 (345-412)||(20952928-20952995)
chr2 (1-122)||(26353382-26353495)
chr2 (550-626)||(20934586-20934662)
chr2 (550-626)||(20953124-20953200)
chr2 (1-123)||(12123434-12123554)
chr2 (218-412)||(20934263-20934457)
chr2 (1-71)||(1345666-1345733)
chr2 (95-147)||(30833646-30833697)
chr2 (1-149)||(32289772-32289919)
chr2 (106-165)||(23078700-23078759)
chr2 (1-149)||(13121965-13122109)
chr2 (546-626)||(39274180-39274260)
chr2 (95-166)||(6266992-6267062)
chr2 (106-165)||(34388669-34388728)
chr2 (106-165)||(42039897-42039956)
chr2 (83-123)||(7815127-7815168)
chr2 (1-62)||(30833552-30833612)
chr2 (93-165)||(10445661-10445732)
chr2 (106-166)||(16940437-16940497)
chr2 (106-166)||(17011102-17011162)
chr2 (106-166)||(21629761-21629819)
[»] chr4 (36 HSPs)
chr4 (1-144)||(26175459-26175601)
chr4 (1-144)||(46147218-46147360)
chr4 (1-144)||(12743751-12743890)
chr4 (1-149)||(5872021-5872166)
chr4 (1-149)||(47038233-47038380)
chr4 (1-144)||(12739376-12739515)
chr4 (1-149)||(45687004-45687151)
chr4 (1-149)||(36463213-36463360)
chr4 (1-149)||(48893460-48893607)
chr4 (1-144)||(52467180-52467323)
chr4 (1-165)||(5369881-5370047)
chr4 (1-149)||(56178453-56178601)
chr4 (1-148)||(29254697-29254842)
chr4 (1-165)||(48143247-48143417)
chr4 (1-103)||(36994722-36994824)
chr4 (1-149)||(34570231-34570379)
chr4 (1-131)||(9927293-9927424)
chr4 (1-144)||(37740828-37740971)
chr4 (1-146)||(31474350-31474494)
chr4 (1-149)||(52082480-52082628)
chr4 (1-125)||(6542027-6542148)
chr4 (1-149)||(52095179-52095327)
chr4 (5-149)||(54199725-54199869)
chr4 (85-165)||(29999628-29999709)
chr4 (1-125)||(4588158-4588279)
chr4 (216-417)||(21237336-21237537)
chr4 (1-107)||(5429882-5429989)
chr4 (547-626)||(21237664-21237743)
chr4 (5-145)||(13992112-13992251)
chr4 (1-149)||(5207668-5207809)
chr4 (1-132)||(37229561-37229690)
chr4 (61-119)||(51338334-51338392)
chr4 (95-140)||(31495130-31495174)
chr4 (83-147)||(48142206-48142268)
chr4 (67-116)||(24969933-24969982)
chr4 (1-53)||(39593649-39593701)
[»] chr5 (32 HSPs)
chr5 (1-166)||(37439345-37439511)
chr5 (1-144)||(538224-538366)
chr5 (1-144)||(42428253-42428395)
chr5 (224-594)||(17969670-17970037)
chr5 (1-149)||(13239955-13240102)
chr5 (5-144)||(28750478-28750616)
chr5 (1-144)||(42426058-42426200)
chr5 (1-149)||(8565765-8565915)
chr5 (7-149)||(31183183-31183324)
chr5 (3-144)||(13488406-13488546)
chr5 (1-141)||(19806566-19806705)
chr5 (1-149)||(5887252-5887401)
chr5 (1-144)||(32637027-32637169)
chr5 (1-144)||(533968-534104)
chr5 (1-149)||(16649652-16649799)
chr5 (1-144)||(30682745-30682888)
chr5 (4-124)||(42927099-42927219)
chr5 (1-142)||(39468373-39468514)
chr5 (1-149)||(33831881-33832029)
chr5 (5-124)||(16452286-16452402)
chr5 (1-165)||(30182792-30182957)
chr5 (1-166)||(25412964-25413130)
chr5 (5-165)||(13343268-13343429)
chr5 (5-165)||(36073843-36074003)
chr5 (1-165)||(16409683-16409846)
chr5 (86-144)||(3075572-3075629)
chr5 (95-149)||(9789039-9789092)
chr5 (95-149)||(18441459-18441512)
chr5 (1-149)||(26178090-26178237)
chr5 (106-165)||(14520039-14520098)
chr5 (59-149)||(42309841-42309930)
chr5 (95-143)||(29750976-29751025)
[»] chr7 (44 HSPs)
chr7 (1-144)||(14069656-14069798)
chr7 (1-144)||(14379684-14379826)
chr7 (1-144)||(41317261-41317403)
chr7 (1-144)||(47675959-47676101)
chr7 (8-144)||(19502389-19502524)
chr7 (1-149)||(41648831-41648978)
chr7 (5-144)||(31105223-31105357)
chr7 (1-149)||(36146229-36146377)
chr7 (1-149)||(8153541-8153688)
chr7 (1-149)||(38671042-38671189)
chr7 (1-144)||(47673767-47673909)
chr7 (1-149)||(48489634-48489782)
chr7 (8-113)||(30024609-30024714)
chr7 (1-144)||(31732791-31732934)
chr7 (1-149)||(24525323-24525471)
chr7 (1-149)||(25616058-25616206)
chr7 (1-144)||(18126849-18126992)
chr7 (1-131)||(4586364-4586495)
chr7 (1-144)||(23555244-23555387)
chr7 (1-144)||(26417519-26417662)
chr7 (1-144)||(43864447-43864590)
chr7 (1-144)||(1113856-1113998)
chr7 (1-149)||(27348020-27348168)
chr7 (1-149)||(35854120-35854267)
chr7 (25-149)||(495805-495928)
chr7 (5-147)||(4178981-4179122)
chr7 (1-149)||(23344172-23344315)
chr7 (1-149)||(48491779-48491927)
chr7 (1-149)||(29991257-29991404)
chr7 (1-124)||(23564910-23565031)
chr7 (5-147)||(48409015-48409156)
chr7 (25-165)||(25766757-25766898)
chr7 (46-131)||(12096999-12097084)
chr7 (23-124)||(31519116-31519217)
chr7 (1-48)||(12097789-12097836)
chr7 (1-165)||(39731575-39731739)
chr7 (1-124)||(36574364-36574485)
chr7 (1-124)||(40808787-40808909)
chr7 (95-165)||(24790302-24790371)
chr7 (106-165)||(9235785-9235843)
chr7 (83-149)||(30843303-30843367)
chr7 (95-144)||(43503974-43504022)
chr7 (64-124)||(4253376-4253436)
chr7 (93-165)||(9190223-9190294)
[»] chr6 (21 HSPs)
chr6 (1-165)||(33160150-33160315)
chr6 (5-149)||(26954108-26954251)
chr6 (1-131)||(14521512-14521646)
chr6 (1-149)||(28137228-28137375)
chr6 (1-149)||(3038744-3038892)
chr6 (1-149)||(16569223-16569372)
chr6 (1-140)||(9182857-9182996)
chr6 (1-149)||(5408887-5409034)
chr6 (1-149)||(5413212-5413359)
chr6 (5-149)||(16452145-16452288)
chr6 (1-148)||(31404493-31404639)
chr6 (1-165)||(5406002-5406164)
chr6 (1-165)||(5410327-5410489)
chr6 (5-149)||(30834351-30834496)
chr6 (1-89)||(33211066-33211154)
chr6 (95-165)||(2171326-2171397)
chr6 (95-144)||(3072579-3072627)
chr6 (95-165)||(412387-412456)
chr6 (106-149)||(22963526-22963568)
chr6 (106-149)||(23824825-23824867)
chr6 (93-127)||(9182828-9182862)
[»] chr3 (44 HSPs)
chr3 (1-144)||(39153187-39153329)
chr3 (1-144)||(29196212-29196355)
chr3 (1-149)||(44700301-44700448)
chr3 (1-149)||(9666287-9666435)
chr3 (1-149)||(22834824-22834971)
chr3 (1-149)||(31314644-31314791)
chr3 (1-147)||(761048-761193)
chr3 (1-144)||(29811071-29811214)
chr3 (1-144)||(23391735-23391878)
chr3 (1-124)||(21350852-21350972)
chr3 (1-149)||(40735585-40735733)
chr3 (1-165)||(19683687-19683853)
chr3 (1-142)||(7762469-7762610)
chr3 (23-165)||(9635923-9636067)
chr3 (1-149)||(40734700-40734848)
chr3 (1-169)||(7764668-7764838)
chr3 (1-148)||(29682560-29682706)
chr3 (8-165)||(9581493-9581652)
chr3 (1-144)||(29813264-29813407)
chr3 (23-165)||(9634621-9634764)
chr3 (1-144)||(23410154-23410298)
chr3 (1-131)||(32891303-32891424)
chr3 (1-149)||(27305536-27305679)
chr3 (1-149)||(5236274-5236422)
chr3 (1-149)||(37408662-37408810)
chr3 (1-149)||(51399017-51399165)
chr3 (5-165)||(5257943-5258104)
chr3 (1-149)||(2074900-2075044)
chr3 (1-149)||(16499228-16499365)
chr3 (1-149)||(45095367-45095514)
chr3 (1-149)||(51351958-51352102)
chr3 (5-130)||(5260158-5260283)
chr3 (93-165)||(23197745-23197816)
chr3 (93-165)||(23199938-23200009)
chr3 (93-149)||(37406985-37407040)
chr3 (25-131)||(32744291-32744388)
chr3 (95-144)||(801388-801436)
chr3 (5-51)||(53921422-53921468)
chr3 (106-165)||(1417707-1417766)
chr3 (106-165)||(6794930-6794988)
chr3 (106-165)||(30710009-30710068)
chr3 (95-165)||(7779802-7779871)
chr3 (105-166)||(37466101-37466161)
chr3 (95-144)||(54635427-54635476)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-165)||(114806-114971)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-140)||(20241-20380)
[»] scaffold1668 (1 HSPs)
scaffold1668 (1-144)||(1324-1467)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-149)||(148929-149066)
[»] scaffold1519 (1 HSPs)
scaffold1519 (6-165)||(1125-1285)
[»] scaffold0491 (2 HSPs)
scaffold0491 (1-165)||(10960-11123)
scaffold0491 (1-165)||(8534-8697)
[»] scaffold0286 (1 HSPs)
scaffold0286 (95-165)||(11864-11935)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-149)||(434738-434885)
[»] scaffold0036 (1 HSPs)
scaffold0036 (106-166)||(85494-85554)
[»] scaffold0087 (1 HSPs)
scaffold0087 (106-165)||(37060-37119)
[»] scaffold1805 (1 HSPs)
scaffold1805 (106-165)||(1217-1277)


Alignment Details
Target: chr1 (Bit Score: 321; Significance: 0; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 214 - 626
Target Start/End: Original strand, 3340307 - 3340719
Alignment:
Q  214 tcacacttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgat 313  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||| |||| ||||||||||||||| |||||||||||||||||||||||  ||    
T  3340307 tcacacttgtcaattaaggaagcagtaagaacaagtgttttatcgagcaattggagaaagaaatggtccactttaccagatcttgtgtttgatcgtgaat 3340406  T
Q  314 gtgtatctactgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaa 413  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3340407 gtgtatctactgaaacttccaaacacccttcagttattgagagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaa 3340506  T
Q  414 gtttgaggtctcagactccaatcaatatttcactattggtgtgaactctatggctgatattgattggtggatttttcagaaatccaaaaggtatattaaa 513  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  3340507 gtttgaggtctcggactccaatcaatatttcactattggtgtgaactctatggctgatattgatcagtggatttttcagatatccaaaaggtatattaaa 3340606  T
Q  514 gagcttgtgctggacagtaggttaaaacaacgctataagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtc 613  Q
    ||| |||||||||||| ||||||||||| ||||||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||||||||||||| |    
T  3340607 gagtttgtgctggacattaggttaaaaccacgctataaaataccttgctgcttattctcttgtcaaagtttgcaacatttagaactgaattattgttgcc 3340706  T
Q  614 ttaaacctccaac 626  Q
    |||| ||||||||    
T  3340707 ttaatcctccaac 3340719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 214 - 626
Target Start/End: Complemental strand, 2948699 - 2948287
Alignment:
Q  214 tcacacttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgat 313  Q
    ||||||||| |||||||||||||||||| ||||||||| || || ||| |  ||||||| ||||||||||| | ||||||||||||||||||| ||||||    
T  2948699 tcacacttgacaattaaggaagcagtaacaacaagtgtgttatcgagcgaatggaggaataaatggtccacacaaccagatcttgtgtttgatagtcgat 2948600  T
Q  314 gtgtatctactgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaa 413  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2948599 gtgtatctactgcaatttccaaagacccttcagttattgagagcaagtttttgagaattgttgatcatgtacttttacttcattctgggccaatcaacaa 2948500  T
Q  414 gtttgaggtctcagactccaatcaatatttcactattggtgtgaactctatggctgatattgattggtggatttttcagaaatccaaaaggtatattaaa 513  Q
    |||||||||||| |||||| |||   |  ||| ||||| ||||||| ||||||| ||||||||| ||||||||  |||   | ||  |||| ||||||||    
T  2948499 gtttgaggtctctgactcctatcgtgacatcattattgatgtgaacgctatggcagatattgatcggtggattcgtcatctaaccggaaggcatattaaa 2948400  T
Q  514 gagcttgtgctggacagtaggttaaaacaacgctataagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtc 613  Q
    ||| ||||| |||||| | | ||  | |||||||||||||||||||  | ||||| ||| || ||| |||||||||||||||| |||||||||||||| |    
T  2948399 gagtttgtgttggacatttgttttgatcaacgctataagataccttcatccttattctcctgccaaggtttacatcatttagatctgaattattgttggc 2948300  T
Q  614 ttaaacctccaac 626  Q
    |||||||||||||    
T  2948299 ttaaacctccaac 2948287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 214 - 626
Target Start/End: Original strand, 3349181 - 3349593
Alignment:
Q  214 tcacacttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgat 313  Q
    ||||||||| ||||||||||| |||||||||||||||| || || ||| |  ||||||||||||||||||| ||||||||||||||||||||| ||| ||    
T  3349181 tcacacttgacaattaaggaatcagtaagaacaagtgtgttatcgagcgaatggaggaagaaatggtccacactaccagatcttgtgtttgatagtctat 3349280  T
Q  314 gtgtatctactgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaa 413  Q
    ||||||||||||||||||||  | | |||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||    
T  3349281 gtgtatctactgaaacttccctaaaaccttcagttattgagagcaagtttttgagaattattgatcatgtacttttacttcattctgggctaatcaacaa 3349380  T
Q  414 gtttgaggtctcagactccaatcaatatttcactattggtgtgaactctatggctgatattgattggtggatttttcagaaatccaaaaggtatattaaa 513  Q
    |||||||||||| ||| ||||||   || ||| ||||  |||| ||||||   ||||||||||| |||||||| ||||   | ||  |||  ||||||||    
T  3349381 gtttgaggtctccgaccccaatcgtgatatcattattaatgtgtactctacaactgatattgatcggtggattcttcatctaaccggaagacatattaaa 3349480  T
Q  514 gagcttgtgctggacagtaggttaaaacaacgctataagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtc 613  Q
    ||| ||||| |||||| ||| ||  | |||||||| | ||||||||  | ||||| ||| || ||| ||||||| |||||| | ||||||||||| || |    
T  3349481 gagtttgtgttggacattagttttgatcaacgctaaatgataccttcatccttattctcctgccaaggtttacaacatttaaatctgaattattgctggc 3349580  T
Q  614 ttaaacctccaac 626  Q
    |||||||||||||    
T  3349581 ttaaacctccaac 3349593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 214 - 626
Target Start/End: Complemental strand, 9819141 - 9818729
Alignment:
Q  214 tcacacttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgat 313  Q
    ||||||||| |||||||||||||||||||||||||| | || || ||| |    ||||||||||||||||| | ||||||||||||||||||| ||||||    
T  9819141 tcacacttgacaattaaggaagcagtaagaacaagtttgttatcgagcgaatacaggaagaaatggtccacacaaccagatcttgtgtttgatagtcgat 9819042  T
Q  314 gtgtatctactgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaa 413  Q
    |||||||||| | ||| ||| || ||||||| ||| |||| || |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  9819041 gtgtatctacggcaacctccgaaaacccttcggttgttgagagaaagtttttgagaattattgatcatgtacttttacttcattccgggccaatcaacaa 9818942  T
Q  414 gtttgaggtctcagactccaatcaatatttcactattggtgtgaactctatggctgatattgattggtggatttttcagaaatccaaaaggtatattaaa 513  Q
    | ||||||||||  ||||| |||   |  ||| ||||| ||||||| |||||||||||||| ||  ||||||| ||||   | ||  || ||||||||||    
T  9818941 gattgaggtctctaactcctatcgggacatcattattgatgtgaacgctatggctgatattaatcagtggattgttcatctaaccggaaagtatattaaa 9818842  T
Q  514 gagcttgtgctggacagtaggttaaaacaacgctataagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtc 613  Q
    ||| ||||| |||||| | | ||  | |||||||||||||||||||  | ||||| ||| || ||| |||||||||||||||| || ||||||||||| |    
T  9818841 gagtttgtgttggacatttgttttgatcaacgctataagataccttcatccttattctcctgccaaggtttacatcatttagatcttaattattgttggc 9818742  T
Q  614 ttaaacctccaac 626  Q
    |||||||||||||    
T  9818741 ttaaacctccaac 9818729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 13137945 - 13137803
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||||||||||||    
T  13137945 tatcttttgcttgtggttttgaggttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggtta 13137846  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  13137845 ctactttcctttgctccacacatcata-atttgtattggtgtga 13137803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 50167144 - 50166997
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| |||| ||||||||||| ||| |||||||||||| ||||||||    
T  50167144 tatcttttgcttgtggttttgaacttttcactttgattactagattagatctaggtgttgttattattgttgtttcttgtgtttactttgatattggtta 50167045  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  50167044 ctactttcctttgctccacacatcatag-tttgttttggtgtgattttg 50166997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 40122165 - 40122018
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||| |||| ||||||||||||||| |||| |||| || ||||||||    
T  40122165 tatcttttgcttgtggttttgagcttttcactttgattactaaattagatctaggtgttgttattattgttgttgcttgtgttcacttagatattggtta 40122066  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  40122065 ctactttcctttgctccacgcatcatag-tttgtattggtgtgattttg 40122018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 4552613 - 4552471
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||| ||| |||||||||||||||||||||    
T  4552613 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctatgtgttgttattattgttgttacttgtgtttactttgaaattggtta 4552514  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||| || ||| |||||||| |||||||||||||||    
T  4552513 ctactttcctttacttcacgcatcatag-tttgtattggtgtga 4552471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30476411 - 30476269
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  30476411 tatcttttacttgtggttttgagcttttcactttgattattagattaggtctaagtgttgttattattgttgttgcttgtgtttactttgaaattggtta 30476312  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||| |||||||||| |||| |||||||||||||||    
T  30476311 ctactttcctttactccacacattatag-tttgtattggtgtga 30476269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 834134 - 833987
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||||||  ||| |||| || ||||| |||||| |||||||||||| ||||||||    
T  834134 tatcttttgcttgtggttttgagcttttcactttgattcccagattagatcttggtgttgttattgttgttattgcttgtgtttactttgatattggtta 834035  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  834034 ctactttcctttgctccacacatcatag-tttgtattggtgtgattttg 833987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 1833712 - 1833855
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||||||||||||    
T  1833712 tatcttttgcttgtagttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggtta 1833811  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgat 145  Q
    | |||||||||| ||||||| ||||||| ||||||||||||||||    
T  1833812 cgactttcctttactccacagatcatag-tttgtattggtgtgat 1833855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 50169179 - 50169032
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||| |||||||||||| || |||| ||||||| ||||||||    
T  50169179 tatcttttgcttgtggttttgagcttttcactttgattactagattagatataggtgttgttattattgttgttgtttgtgttcactttgatattggtta 50169080  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  50169079 ctactttcatttgcttcacacatcatag-tttgtattggtgtgattttg 50169032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 196874 - 196727
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||| || ||| |||| ||||||||||||||| |||| ||||||| ||||||||    
T  196874 tatcttttgcttgtggttttgagcttctcactttgattactagattagatgtaggtgttgttattattgttgttgcttgtgttcactttgatattggtta 196775  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||| |||||||||||||||||||||||  ||||||||||||||| ||||    
T  196774 ctattttcctttgctccacacatcata-atttgtattggtgtgaatttg 196727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 45644323 - 45644175
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt-atgtttactttgaaattggtt 99  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||||||  || |||| |||||||||||||||  ||||| |||||| |||||||    
T  45644323 tatcttttgtttgtggttttgagcttttcactttgattgctagattagatctagatgttgttattattgttgttgcttgttgtttgctttgatattggtt 45644224  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  45644223 actactttcctttgctccacacatcatag-tttgtatttgtgtgattttg 45644175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 28265523 - 28265376
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||||||||||  || |||| ||||||||||||||| |||| ||||||| ||||| ||    
T  28265523 tatcttttggttgtggttttgagctttttactttgattactagattagatctagatgttgttattattgttgttgcttgtgttcactttgatattggcta 28265424  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  28265423 ctattttcctttactccacacatcatag-tttgtattggtgtgattttg 28265376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28223386 - 28223248
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||| ||||| | ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||| ||||||| ||||||||    
T  28223386 tatcttttgcttgtgattttgtgtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattggtta 28223287  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggt 140  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  28223286 ctactttcgtttgctccacacatcatag-tttgtattggt 28223248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 3847088 - 3846938
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttatt---gttgttgcttatgtttactttgaaattgg 97  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||| |||| |||||   |||||||||| |||| ||||||| |||||    
T  3847088 tatcttttgcttgtggttttgagcttttcactttgattactatattagatctaggtgttgttattattattgttgttgcttgtgttcactttgatattgg 3846989  T
Q  98 ttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||| ||||||||||||||| |||||||| || ||||||||    
T  3846988 ttactactttcctttactccacacatcatag-tttgtattagtatgattttg 3846938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 28220191 - 28220049
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| |||||||||||| || |||| ||||| | ||||||||    
T  28220191 tatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgtttgtgttcactttaatattggtta 28220092  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||| ||| ||||| |||||||||||||| |||||||||||||||    
T  28220091 ctaattttctttgttccacacatcatag-tttgtattggtgtga 28220049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 3157068 - 3157199
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  3157068 tatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggtt 3157167  T
Q  100 actactttcctttgctccacacatcatagttt 131  Q
    ||||||||||||||||||||||||||||||||    
T  3157168 actactttcctttgctccacacatcatagttt 3157199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 8550749 - 8550601
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||| ||||| | ||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  8550749 tatcttgtgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggtt 8550650  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8550649 actactttcctttgctccacacatcatag-tttgtattggtgtgattttg 8550601  T

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Target: chr1; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 10925425 - 10925573
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||| ||    
T  10925425 tatcttttgcttgtggttttgagtttttccctttgattactagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattgatt 10925524  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  10925525 actactttcctttgctccacacaacatag-tttgtattgttgtgattttg 10925573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 49918553 - 49918701
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||| |||| |||||||| |||| || ||||||||||| || ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  49918553 tatcttttgcttgtggatttgtgcttttcattttgattcctagattagatataggtgctgttattgttgattattgcttgtgttcactttgatattggtt 49918652  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  49918653 actactttcctttgctccacacatcatag-tttgtattggtgtgattttg 49918701  T

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Target: chr1; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 23555231 - 23555088
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactac 104  Q
    |||||||||||||||||||||||||||| || || ||| |||||||||| ||| |||| || |||||||||||| |||||||||||| |||| |||||||    
T  23555231 ttttgcttgtggttttgagcttttcactatgattcctaaattagatctaggtgttgttattgttgttgttgcttgtgtttactttgacattgattactac 23555132  T
Q  105 tttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||| |||||||||||||||||| | ||| |||||||| |||||||    
T  23555131 ttttctttgctccacacatcattg-tttctattggtgcgattttg 23555088  T

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Target: chr1; HSP #24
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 41361114 - 41361245
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||| |||||||||||||||||| |||||| || ||||||||||| || ||| |||| || |||||||| ||| |||||||||||| |||| |||    
T  41361114 tatcttttgtttgtggttttgagctttttactttgattcctagattagatataggtgttgttattgttgttgttacttgtgtttactttgatattgatta 41361213  T
Q  101 ctactttcctttgctccacacatcatagtttt 132  Q
     |||||||||||||||||||||||||||||||    
T  41361214 atactttcctttgctccacacatcatagtttt 41361245  T

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Target: chr1; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 226 - 412
Target Start/End: Complemental strand, 4323333 - 4323147
Alignment:
Q  226 attaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgatgtgtatctactg 325  Q
    |||| ||| ||||| ||||||||||||||||| || ||| ||||||| |||||||  || || ||| |||||||| ||||| | | |||||| ||| |||    
T  4323333 attagggacgcagtgagaacaagtgttttgtcgaggaattggaggaaaaaatggtatacacttccaaatcttgtgcttgatagacaatgtgtgtctgctg 4323234  T
Q  326 aaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaaca 412  Q
    || ||||| ||||||||| |||||||||   ||||||||  | ||| ||||||||||||||||||||||||||||||||||||||||    
T  4323233 aagcttcccaagaccctttagttattgagcccaagttttcgaaaatggttgatcatgtacttttacttcattctgggccaatcaaca 4323147  T

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Target: chr1; HSP #26
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16455820 - 16455967
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||| |||||||||||||| ||||||||||| |||| ||||||||||||  || |||| |||||||||||||||| ||||||||||| ||||||||    
T  16455820 tatcttttacttgtggttttgagtttttcactttgattaccagattagatctatatgttgttattattgttgttgcttacgtttactttgatattggtta 16455919  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||| |||||| |||| ||| | |||||  |||||||| ||||||    
T  16455920 ctactttcatttgctacacaaatctttgtttt-cattggtgtaattttg 16455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 3189534 - 3189695
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtg--------------gtgttgttattgttgttgcttatgtttac 86  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||              || || ||||||||||||||| |||| ||    
T  3189534 tatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattgttgttttattattgttgttgcttgtgttcac 3189633  T
Q  87 tttgaaattggttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  3189634 tttgaaattggttactactttcctttgctccagacatcatag-tttatattggtgtgattttg 3189695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 3198351 - 3198512
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtg--------------gtgttgttattgttgttgcttatgtttac 86  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||              || || ||||||||||||||| |||| ||    
T  3198351 tatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattgttgttttattattgttgttgcttgtgttcac 3198450  T
Q  87 tttgaaattggttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  3198451 tttgaaattggttactactttcctttgctccagacatcatag-tttatattggtgtgattttg 3198512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 3207190 - 3207351
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtg--------------gtgttgttattgttgttgcttatgtttac 86  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||              || || ||||||||||||||| |||| ||    
T  3207190 tatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttattattattgttgttttattattgttgttgcttgtgttcac 3207289  T
Q  87 tttgaaattggttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  3207290 tttgaaattggttactactttcctttgctccagacatcatag-tttatattggtgtgattttg 3207351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 37559831 - 37559687
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagatt-agatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggt 98  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||| ||||||| ||| |||| || ||| || |||||| |||| ||||||| ||||||    
T  37559831 tatcttttgcttgtggttttgtgcttttcactttgattcctagatttagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggt 37559732  T
Q  99 tactactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||||    
T  37559731 tactactttcctttgctccagacatcatag-tttatattggtgtga 37559687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 218 - 626
Target Start/End: Original strand, 3361521 - 3361926
Alignment:
Q  218 acttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgatgtgt 317  Q
    ||||| |||| ||||||||||| ||||||||| |||| || |||||  |||| || ||||||| ||| |||||| ||||||| ||||||   | || ||     
T  3361521 acttgccaatcaaggaagcagtgagaacaagtattttatccagcaaatggagtaacaaatggtacacgctaccaaatcttgtatttgataaac-at-tgc 3361618  T
Q  318 atctactgaaac---ttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaag 414  Q
    |||| |||| ||   |||| |||||||||| |||||  | | ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3361619 atct-ctgatacagattcccaagacccttcggttatcaataacaagtttttgagaattgttgatcatgtacttttacttcattatgggccaatcaacaag 3361717  T
Q  415 tttgaggtctcagactccaatcaatatttcactattggtgtgaactctatggctgatattgattggtggatttttcagaaatccaaaaggtatattaaag 514  Q
    ||  || ||   |||| | ||    || ||| ||   || |||  |||||| | |||||| |  |||||||| ||||   | ||  ||||  ||||||||    
T  3361718 ttccagatccgcgactactattgtaatctcatta---gtttgagttctatgacagatattcaaaggtggattattcacctaacccgaaggcctattaaag 3361814  T
Q  515 agcttgtgctggacagtaggttaaaacaacgctataagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtct 614  Q
    || |||||||| ||| | ||||| |  ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| | || |  ||||| ||    
T  3361815 agtttgtgctgcacatttggttagacgaacgctataagatcccttggtgcttattctcttgtcaaagtttacatcatttagaattaaaatgctgttggct 3361914  T
Q  615 taaacctccaac 626  Q
    ||||||||||||    
T  3361915 taaacctccaac 3361926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 20762876 - 20763037
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| |||||||||||      |||||||||||||| ||| |||| || ||| || ||||||   || ||||||| |||||||    
T  20762876 tatcttttgcttgtggttttgtgcttttcacttc-----ctagattagatctaggtgctgttattgttgattattgcttgaattcactttgatattggtt 20762970  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    | ||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||    
T  20762971 aatactttcctttgctccacacatcatag-tttgtattggtgtgattttgagaccggaattcacaaca 20763037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 31659441 - 31659589
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||| |||||||| |||||| |||||| || |||||||||||| | ||| |||| || ||| || |||||| |||| | ||||| |||||||    
T  31659441 tatcttttgcttatggttttgtgctttttactttgattcctagattagatcaaggtgttgttattgttgattattgcttgtgttcattttgatattggtt 31659540  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||| |||| |||||||||||||| |||| ||||||||||||||||    
T  31659541 actacttttcttttctccacacatcata-ttttatattggtgtgattttg 31659589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 44455363 - 44455511
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||| |||||||| | ||||||||||| || |||||||||||||| ||| |||| || ||| || ||| || |||| ||||||| |||||||    
T  44455363 tatcttttgcttttggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggtt 44455462  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    || ||||| |||| ||||||| ||||||| ||||||||||||||||||||    
T  44455463 accacttttcttttctccacatatcatag-tttgtattggtgtgattttg 44455511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 46065117 - 46065238
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||||||| |||||| ||  ||| ||||||||||||| ||| |||| ||||||||||||||| | ||||||||| |||||||||    
T  46065117 tatcttttgcttgtggttttgagcctttcacatta-ttagtagattagatctaggtgttgttattattgttgttgcttgtatttactttg-aattggtta 46065214  T
Q  101 ctactttcctttgctccacacatc 124  Q
    | ||| || |||||||||||||||    
T  46065215 caactatcgtttgctccacacatc 46065238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 927945 - 927817
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggtta-ctagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||| |||||||||||| |||||||||||| ||| ||| |||||||||||||  ||||||| ||||||||   | || ||||||||| |||||||    
T  927945 tatcttttgtttgtggttttgaacttttcactttgattatctatattagatctaagttttgttgttgttgttgtt---tgtgattactttgatattggtt 927849  T
Q  100 actactttcctttgctccacacatcatagttt 131  Q
    || |||| ||||| ||||||||||||||||||    
T  927848 accacttccctttactccacacatcatagttt 927817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 8870692 - 8870544
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||||   ||||||||||| || ||||||| |||||| ||  | || |||||||| |||||| || ||||||||| | | ||||    
T  8870692 tatcttttgcttgtggttttgtatttttcactttgattcctagatttgatctaggttttttttttattgtttttgcttgtgattactttgatactagtta 8870593  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||| |||||||||  | |||||  |||||||||||||||    
T  8870592 ctactttcctttgttccacacatatttgtttttcattggtgtgattttg 8870544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 13659305 - 13659168
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||||  ||||||| |||| || ||||||||||| ||   |||||||||||||      ||| ||||||||||||  |||||||    
T  13659305 tatcttttgcttgtggttttgtacttttca-tttgattcctagattagattta---ggtgttgttattg------cttgtgtttactttgatgttggtta 13659216  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  13659215 ctactttcctttgctccacacattatag-tttgtattgatgtgattttg 13659168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 37503522 - 37503379
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||| ||||||| ||||||||||||  || |||||||||||||| ||| || | || ||| || |||||| |||| ||||||| |||        
T  37503522 tatcttttgcttgcggttttgtgcttttcactttaattcctagattagatctaggtgttgatattgttgattattgcttgtgttcactttgatatt---- 37503427  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
     |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  37503426 -ctactttcctttactccacacatcatag-tttgtattggtgtgattttg 37503379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 224 - 416
Target Start/End: Original strand, 3372499 - 3372691
Alignment:
Q  224 caattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgatgtgtatctac 323  Q
    ||||||| |||||||| |||||||||||||| || ||||   ||||||| ||||||| ||| |||||| ||||||||||| |    |  ||  | |||      
T  3372499 caattaaagaagcagtgagaacaagtgttttatccagcagctggaggaacaaatggtacacactaccaaatcttgtgtttaacaaacattgcatctctgt 3372598  T
Q  324 tgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaagtt 416  Q
    || | |||||||| || ||||||||||  | | ||||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  3372599 tgcagcttccaaatacacttcagttatcaataacaagtttttgagaattgttgatcatgtacttttacaacattctggtccaatcaacaagtt 3372691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 13316312 - 13316151
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||||||| | | ||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||   || ||||||  |||| ||||||    
T  13316312 ttttgcttgtggttt-gtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattgattacta 13316214  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||  | |||||||||||||||    
T  13316213 ctttcctttgctccacacattata-tttcgtattggtgtgattttgagaccggaattcacaaca 13316151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 224 - 416
Target Start/End: Complemental strand, 6601977 - 6601788
Alignment:
Q  224 caattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgatgtgtatctac 323  Q
    |||||||||||||||| ||||||||| |||| |||| |||  ||||| | |||||| |||| || ||| |||||||||||||| | | ||||  |||| |    
T  6601977 caattaaggaagcagtgagaacaagtattttatcaaccaaatggaggtacaaatgggccacacttccaaatcttgtgtttgatagccaatgt--atctcc 6601880  T
Q  324 tgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaagtt 416  Q
     || |||||  |||||| || ||||||  | |||||  |||  |||||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  6601879 -gacacttctgaagaccttttagttatcaagagcaaactttcgagaattattgatcatgtacttttactccattctgggccaatcaaaaagtt 6601788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 15820512 - 15820623
Alignment:
Q  7 ttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactactt 106  Q
    ||||||||| || ||||||||||  |||| || ||| ||||||||||   |||||||||   |||||||||| |||||||||||| ||| ||||||||||    
T  15820512 ttgcttgtgtttatgagcttttctatttgattcctatattagatcta---ggtgttgtt---gttgttgcttgtgtttactttgatattagttactactt 15820605  T
Q  107 tcctttgctccacacatc 124  Q
    ||||||||||||||||||    
T  15820606 tcctttgctccacacatc 15820623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 51765603 - 51765766
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||||||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||    | ||||    | |||||    
T  51765603 tatcttgtgcttgtggttt-gtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcactcacttaattagtggtt 51765701  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||||  ||||||||||||||    
T  51765702 actactttcctttgctccacacatcata-tttcgtattggtgtggttttgtacggaattcacaaca 51765766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 3378648 - 3378726
Alignment:
Q  329 cttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaat 407  Q
    ||||| ||| |||||| ||||| || ||||||||||| |||||| | ||||||||||||||||||||||||||||||||    
T  3378648 cttcccaaggcccttcggttatcgagagcaagtttttgagaattatcgatcatgtacttttacttcattctgggccaat 3378726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 224 - 416
Target Start/End: Complemental strand, 6592725 - 6592536
Alignment:
Q  224 caattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgatgtgtatctac 323  Q
    |||||||||||||||  ||||||||| |||| || | |||  ||||| | |||||| |||| || ||| ||||||||||||||  |  |||| | ||       
T  6592725 caattaaggaagcagccagaacaagtattttatctaccaactggaggtacaaatggaccacacttccaaatcttgtgtttgataatgaatgtctctcc-- 6592628  T
Q  324 tgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaagtt 416  Q
     |||||||| ||||||| || ||||||  | |||||| ||| ||||||| ||||||||||||||||||| | |||||| |||||||| |||||    
T  6592627 -gaaacttctaaagaccttttagttatcaagagcaagctttcaagaattattgatcatgtacttttactccgttctggaccaatcaaaaagtt 6592536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 347 - 412
Target Start/End: Complemental strand, 4335102 - 4335037
Alignment:
Q  347 ttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaaca 412  Q
    ||||||||| |||||||||   |||||||||||||||||||||| |||||||||| ||||||||||    
T  4335102 ttattgacaacaagtttttgcaaattgttgatcatgtacttttagttcattctggaccaatcaaca 4335037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 624
Target Start/End: Original strand, 2006580 - 2006657
Alignment:
Q  547 tataagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtcttaaacctcca 624  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| ||  | |  |||||||||  ||||||||||||    
T  2006580 tataagataccttggtgcttattttcttgtcaaagtttacatcatctaacattatattattgtttgcttaaacctcca 2006657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 3218598 - 3218549
Alignment:
Q  367 agaattgttgatcatgtacttttacttcattctgggccaatcaacaagtt 416  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  3218598 agaattgttgatcatgtacttctacttcattctggaccgatcaacaagtt 3218549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 369 - 416
Target Start/End: Original strand, 2006414 - 2006461
Alignment:
Q  369 aattgttgatcatgtacttttacttcattctgggccaatcaacaagtt 416  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  2006414 aattattgatcaggtacttttactttattctgggccaatcaacaagtt 2006461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 369 - 416
Target Start/End: Original strand, 2010503 - 2010550
Alignment:
Q  369 aattgttgatcatgtacttttacttcattctgggccaatcaacaagtt 416  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||    
T  2010503 aattattgatcatgtacttttactttattccgggccaatcaacaagtt 2010550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 369 - 416
Target Start/End: Original strand, 2019716 - 2019763
Alignment:
Q  369 aattgttgatcatgtacttttacttcattctgggccaatcaacaagtt 416  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||    
T  2019716 aattattgatcatgtacttttactttattccgggccaatcaacaagtt 2019763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 36683885 - 36683935
Alignment:
Q  73 ttgcttatgtttactttgaaattggttactactttcctttgctccacacat 123  Q
    |||||| | |||||||||| ||||||||| |||||||||||||||||||||    
T  36683885 ttgcttgtttttactttgatattggttaccactttcctttgctccacacat 36683935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 40282680 - 40282749
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||| ||| |||||||||||||||||||||| |||| ||||||||| ||| | |||| ||||||||||    
T  40282680 tggttaccactctcctttgctccacacatcatag-tttgcattggtgtggtttcgtccgggattcacaaca 40282749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 2006253 - 2006345
Alignment:
Q  214 tcacacttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgat 306  Q
    ||||||||| |||||| |||||| || |||||||||||||| || | |||  ||||| | |||||| ||||  ||||| ||||||||||||||    
T  2006253 tcacacttgccaattagggaagctgtgagaacaagtgttttatccaacaaatggaggtacaaatgggccacaataccaaatcttgtgtttgat 2006345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 597
Target Start/End: Complemental strand, 6601681 - 6601625
Alignment:
Q  541 caacgctataagataccttggtgcttatactcttgtcaaagtttacatcatttagaa 597  Q
    ||||||||||| |||||||  |||||||  ||||||||| |||||||||||||||||    
T  6601681 caacgctataaaataccttcatgcttattttcttgtcaaggtttacatcatttagaa 6601625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 582 - 622
Target Start/End: Original strand, 9820163 - 9820203
Alignment:
Q  582 tttacatcatttagaactgaattattgttgtcttaaacctc 622  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  9820163 tttacatcatttagatctgaattattgttggcttaaacctc 9820203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 127
Target Start/End: Complemental strand, 20622103 - 20622071
Alignment:
Q  95 tggttactactttcctttgctccacacatcata 127  Q
    |||||||||||||||||||||||||||||||||    
T  20622103 tggttactactttcctttgctccacacatcata 20622071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 21536797 - 21536857
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaacat 166  Q
    ||||||||||||||||||| | |||||  ||||||||||||||  |||||||||| |||||    
T  21536797 ttcctttgctccacacatctttgtttttcattggtgtgatttttaccggaattcaaaacat 21536857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 594
Target Start/End: Original strand, 3378863 - 3378910
Alignment:
Q  547 tataagataccttggtgcttatactcttgtcaaagtttacatcattta 594  Q
    ||||||||| | |||||||||| ||||||||||||||||| |||||||    
T  3378863 tataagataacatggtgcttattctcttgtcaaagtttacgtcattta 3378910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 775553 - 775482
Alignment:
Q  93 attggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaacat 166  Q
    ||||||||| |||| ||||||||||||||||| | ||| |  ||||||||||||||| || |||||||||||||    
T  775553 attggttaccactt-cctttgctccacacatctttgttattcattggtgtgattttgtcc-gaattcacaacat 775482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 416
Target Start/End: Original strand, 2011923 - 2011960
Alignment:
Q  379 catgtacttttacttcattctgggccaatcaacaagtt 416  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  2011923 catgtacttttactttattatgggccaatcaacaagtt 2011960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 588
Target Start/End: Original strand, 2012073 - 2012114
Alignment:
Q  547 tataagataccttggtgcttatactcttgtcaaagtttacat 588  Q
    ||||||||||||||||||||||  ||||||||||| ||||||    
T  2012073 tataagataccttggtgcttattttcttgtcaaagcttacat 2012114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 594
Target Start/End: Original strand, 3372773 - 3372866
Alignment:
Q  501 aaggtatattaaagagcttgtgctggacagtaggttaaaacaacgctataagataccttggtgcttatactcttgtcaaagtttacatcattta 594  Q
    ||||| ||| ||||||||| ||||| ||  | ||||| |  |||| ||||||||||||| | | |||| ||||||||||||||||| |||||||    
T  3372773 aaggtctataaaagagcttctgctgcacttttggttagacaaacgttataagatacctttgagtttattctcttgtcaaagtttacgtcattta 3372866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 9987502 - 9987551
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagtttt-gtattggtgtg 143  Q
    ||||||| ||| ||||||||||||||||||||| |||| |||||||||||    
T  9987502 tggttaccactctcctttgctccacacatcatatttttcgtattggtgtg 9987551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 21054258 - 21054307
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagtt-ttgtattggtgtg 143  Q
    ||||||| ||| ||||||||||||||||||||| || |||||||||||||    
T  21054258 tggttaccactctcctttgctccacacatcatatttcttgtattggtgtg 21054307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 547 - 591
Target Start/End: Original strand, 2010663 - 2010707
Alignment:
Q  547 tataagataccttggtgcttatactcttgtcaaagtttacatcat 591  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||||    
T  2010663 tataagataccttggtgcttattttcttgtcaaagcttacttcat 2010707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 547 - 591
Target Start/End: Original strand, 2019876 - 2019920
Alignment:
Q  547 tataagataccttggtgcttatactcttgtcaaagtttacatcat 591  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||||    
T  2019876 tataagataccttggtgcttattttcttgtcaaagcttacttcat 2019920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 3218750 - 3218662
Alignment:
Q  218 acttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgat 306  Q
    ||||| |||||| ||||||||| | ||||||||||||||| ||  |  ||||||| ||||||  ||| |||||| || |||||||||||    
T  3218750 acttgccaattagggaagcagtgaaaacaagtgttttgtccagtgaatggaggaataaatggcacacactaccaaatattgtgtttgat 3218662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 597
Target Start/End: Complemental strand, 6592426 - 6592370
Alignment:
Q  541 caacgctataagataccttggtgcttatactcttgtcaaagtttacatcatttagaa 597  Q
    ||||||||||| |||||||  || ||||  |||||||||||||| ||||||||||||    
T  6592426 caacgctataaaataccttcatggttattttcttgtcaaagtttgcatcatttagaa 6592370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 2e-63; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 43036626 - 43036768
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  43036626 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaggtggtgttgttattgttgttgcttgtgtttactttgaaattggtta 43036725  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  43036726 ctactttcctttgctccacacatcat-tttttgtattggtgtga 43036768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 40321279 - 40321443
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||| |||| ||     
T  40321279 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgatattgattg 40321378  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg-cccggaattcacaacat 166  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||||   |||||||||||||||    
T  40321379 ctactttcctttgctccacatatcatag-tttgtatt-gtgtgattttgagtcggaattcacaacat 40321443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 30143543 - 30143691
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  30143543 tatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggtt 30143642  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30143643 actactttcctttgctccacacatcatag-tttgtattggtgtgattttg 30143691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 41366582 - 41366435
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||| ||||||||||| ||||||||||||| || ||| |||||||||| ||| |||| || ||||| |||||| |||||||||||| ||||||||    
T  41366582 tatcttttgtttgtggttttgtgcttttcactttgattcctatattagatctaggtgttgttattgttgttattgcttgtgtttactttgatattggtta 41366483  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41366482 ctactttcctttgctccacacatcatag-tttgtattggtgtgattttg 41366435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 5689470 - 5689636
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt-atgtttactttgaaattggtt 99  Q
    |||||||| |||||||||||||||||||||||||| |||||| ||||||| ||  || |||| |||||||||||||||  ||||| |||||| |||||||    
T  5689470 tatcttttacttgtggttttgagcttttcactttgattactaaattagatttagatgttgttattattgttgttgcttgttgtttgctttgatattggtt 5689569  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg-cccggaattcacaacat 166  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||||    
T  5689570 actactttcctttgctccacacatcatag-tttgtattggtgtgattttgagtcggaattcacaacat 5689636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 6599172 - 6599316
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||| |||||||||||| ||||||||||||| |||||||||||||||||   |||||||||||| |||||| || |||| ||||||| ||||||||    
T  6599172 tatctttttcttgtggttttgtgcttttcactttgattactagattagatcta---ggtgttgttattattgttgtttgtgttcactttgatattggtta 6599268  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  6599269 ctactttcctttgctctacacatcatag-tttgtattggtgtgattttg 6599316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 6674625 - 6674769
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||| |||||||||||| ||||||||||||| |||||||||||||||||   |||||||||||| |||||| || |||| ||||||| ||||||||    
T  6674625 tatctttttcttgtggttttgtgcttttcactttgattactagattagatcta---ggtgttgttattattgttgtttgtgttcactttgatattggtta 6674721  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  6674722 ctactttcctttgctctacacatcatag-tttgtattggtgtgattttg 6674769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 42498398 - 42498562
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| | ||||||||||| || |||||||||||||| ||| |||| || ||  || |||||| |||| ||||||| |||||||    
T  42498398 tatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgttgttattgttaattattgcttgtgttcactttgatattggtt 42498497  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  42498498 gctactttcctttgctccacacatcata-ttttgtattggtgtgattttgtccggaattcacaaca 42498562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 1345340 - 1345193
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||| | || |||||||||||| || |||||||||||| ||||||||    
T  1345340 tatcttttgcttgtgattttgagattttcactttgattactagattagatctaggtgttattattattgttgttgtttgtgtttactttgatattggtta 1345241  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||| || || | |||||||| |||||||||||    
T  1345240 ctactttcctttgctccacagattattg-tttgtatttgtgtgattttg 1345193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 18106040 - 18105893
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||| ||||| | ||||||||||| || |||||||||||||| ||| |||| || ||||| |||||| |||||||||| | ||||||||    
T  18106040 tatcttttgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgatgttattgttgttattgcttgtgtttactttaatattggtta 18105941  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  18105940 ctactttcctttgctctacacatcatag-tttgtattagtgtgattttg 18105893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 12702599 - 12702448
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggtta-ctagattagatctaagtggtgttgttatt---gttgttgcttatgtttactttgaaattg 96  Q
    |||||| |||||||||||||| | ||||||||||| ||  |||||||||||||| |||  |||||||||   |||||||||| |||||||||||| ||||    
T  12702599 tatcttgtgcttgtggttttgtgtttttcactttgattttctagattagatctaggtgtcgttgttattattgttgttgcttgtgtttactttgatattg 12702500  T
Q  97 gttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  12702499 gttactactttcctttgctccacacatcatag-tttgtattgatgtgattttg 12702448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 4731861 - 4732009
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||| || |||| ||||||| || ||||    
T  4731861 tatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatatcggtt 4731960  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  4731961 actactttcctttgctccacacatcattg-tttgtattggtgtgattttg 4732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 19491667 - 19491536
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||| |||||||||||||||||| |||||| || ||||||||||| || ||| |||| || |||||||| ||| |||||||||||| |||| |||    
T  19491667 tatcttttgtttgtggttttgagctttttactttgattcctagattagatataggtgttgttattgttgttgttacttgtgtttactttgatattgatta 19491568  T
Q  101 ctactttcctttgctccacacatcatagtttt 132  Q
     |||||||||||||||||||||||||||||||    
T  19491567 atactttcctttgctccacacatcatagtttt 19491536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 15212989 - 15213132
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||| |||| ||||||||||||| || |||||||||||| | ||| |||| || ||| || ||| || |||| ||||||| |||||||    
T  15212989 tatcttttgcttgtggctttgtgcttttcactttgattcctagattagatcaaggtgctgttattgttgattattgtttgtgttcactttgatattggtt 15213088  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  15213089 actactttcctttgctccacacatcatag-tttgtattggtgtga 15213132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 10015278 - 10015401
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||| ||  |||| |||||||| |||||| |||| ||||||| ||||||||    
T  10015278 tatcttttgcttgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattgtttttgcttgtgttcactttgatattggtta 10015377  T
Q  101 ctactttcctttgctccacacatc 124  Q
     ||||||||| |||||||||||||    
T  10015378 ttactttcctctgctccacacatc 10015401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 27811481 - 27811631
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||| ||||| ||||||||||||| || ||| |||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  27811481 tatcttttgcttgtgattttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggtt 27811580  T
Q  100 actactttcctttgctccacacatcata-gttttgtattggtgtgattttg 149  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||||||||    
T  27811581 actactttcctttcctccacacatcatatagtttgtattggtgtgattttg 27811631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 44304059 - 44304206
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| || | ||||| | |||||||    
T  44304059 tatcttttgcttgtggttt-gtgcttttcactttgatttctagattagatctaggtgttgttattgttgattattgcttgtgctcactttaatattggtt 44304157  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  44304158 actactttcctttgctccacacatcatag-tatgtattggtgtgattttg 44304206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 34254295 - 34254149
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||| | ||||||| ||||| || |||||||||||||| ||| |||| || ||| || |||||| || | ||||||| |||||||    
T  34254295 tatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttgatattggtt 34254197  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgatttt 148  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  34254196 actactttcctttgctccacacatcatag-tttgtattggtgtgttttt 34254149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 17982861 - 17983002
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||||||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||  |||||||||||    
T  17982861 ttttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttacta 17982959  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgattt 147  Q
    | ||||||||||||||||||||||| ||||||||||||||||||    
T  17982960 cgttcctttgctccacacatcatag-tttgtattggtgtgattt 17983002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 3303639 - 3303493
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggtta----ctagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattg 96  Q
    ||||||||||||||| |||||  |||||||||||| ||     |||||||||||||| |||  ||| ||||||||||||||| |||||  ||||| ||||    
T  3303639 tatcttttgcttgtgattttgtacttttcactttgattgattcctagattagatctaggtgtagttattattgttgttgcttgtgtttgttttgatattg 3303540  T
Q  97 gttactactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  3303539 gttaccactttcctttgctccacacatcatag-tttgtattggtgtga 3303493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 4733909 - 4734058
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||| |||||||||||| |||||||| |||| || ||| ||| |||||| ||| |||| || ||| || |||||| |||| | ||||| |||||||    
T  4733909 tatcttttccttgtggttttgtgcttttcattttgtttcctacatttgatctaggtgttgttattgttgattattgcttgtgttcattttgatattggtt 4734008  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  4734009 actactttcctttgctccacacatcattggtttgtattggtgtaattttg 4734058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34256471 - 34256309
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||| | ||||||| ||||| || |||||||||||||| ||| |||| || ||| || |||||| || | ||||| | |||||||    
T  34256471 tatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttaatattggtt 34256373  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttgc--ccggaattcaca 162  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| |  ||||||||||||    
T  34256372 actactttcctttgctccacacatcatag-tttgtattggtgtgttttttcaaccggaattcaca 34256309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 1292433 - 1292311
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||| |||| || |||||  | ||| |||||||||||| |||| |||    
T  1292433 tatcttttgctcgtggttttgagcttttcactttgattcctagattagatctaggtgttgttattgttgttactacttgtgtttactttgatattgttta 1292334  T
Q  101 ctactttcctttgctccacacat 123  Q
    ||||||| ||||||||| |||||    
T  1292333 ctacttttctttgctccccacat 1292311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 4743183 - 4743050
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||| ||||||||||||| ||||||||||||| || ||||||||||||||   |||||||||||||      ||| |||||||||||  ||||||||    
T  4743183 tatctttcgcttgtggttttgtgcttttcactttgattcctagattagatcta---ggtgttgttattg------cttgtgtttactttggtattggtta 4743093  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    | ||||||||||||||||||||| |||| |||||||||||||||    
T  4743092 ccactttcctttgctccacacattatag-tttgtattggtgtga 4743050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 1746179 - 1746036
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||||||| | |||||| |||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||  |||||||||||    
T  1746179 ttttgcttgtggttt-gcgcttttgactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttacta 1746081  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||    
T  1746080 ctttcctttactccacacatcatag-ttcgtattggtgtgattttg 1746036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33352353 - 33352501
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||| |||| | ||||||||||| || ||||||||||| || ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  33352353 tatcttttgcttgtggatttgtgtttttcactttgatttctagattagatttaggtgttgttattgttgattattgcttgtgttcactttgatattggtt 33352452  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    | ||||||||||||||||||| ||||||  ||| ||||||||||||||||    
T  33352453 attactttcctttgctccacatatcata-atttatattggtgtgattttg 33352501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18142017 - 18142105
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttacttt 89  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||| ||||| ||||||||| ||||||||||    
T  18142017 tatcttttgcttgtggttttgagcttttcactttgattactagattagatgtaggtgttgttattattattgttgcttgtgtttacttt 18142105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 19945319 - 19945158
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||||||| | ||||||||||| | || |||||||||||||| ||| |||| || ||| || ||||||   || ||||||  |||||||||||    
T  19945319 ttttgcttgtggttt-gtgcttttcacttcgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttacta 19945221  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    |||||||||||||||||||||| || |||||||||||||||||||  | |||||||||||||||    
T  19945220 ctttcctttgctccacacatcaaag-tttgtattggtgtgattttgagaccggaattcacaaca 19945158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 31218475 - 31218625
Alignment:
Q  16 gttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttactactttcctttgc 114  Q
    |||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||   || ||||||  ||||||| ||||||||||||||    
T  31218475 gttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttgctactttcctttgc 31218574  T
Q  115 tccacacatcatagttttgtattggtgtgattt-tgcccggaattcacaaca 165  Q
    |||||||||||||| ||| ||||||||||||||  | |||||||||||||||    
T  31218575 tccacacatcatag-tttatattggtgtgatttgagaccggaattcacaaca 31218625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 3051090 - 3050963
Alignment:
Q  3 tcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt----atgtttactttgaaattggt 98  Q
    |||| |||||||||||||||||||||||||||  || |||||||||||||| ||| |||| |||||||||||||||     || || ||||||   ||||    
T  3051090 tcttatgcttgtggttttgagcttttcactttaatttctagattagatctaggtgttgttattattgttgttgcttgtgattgcttgctttgattgtggt 3050991  T
Q  99 tactactttcctttgctccacacatcat 126  Q
    ||||||||| |||| |||||||||||||    
T  3050990 tactacttttctttactccacacatcat 3050963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 8153986 - 8154147
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||| |||  ||||| | ||||||||||  || |||||||| ||||| ||  |||| ||||||||||||||| || ||||||||| |||| |||    
T  8153986 tatcttttgcatgtaattttgtgtttttcacttta-ttcctagattacatctaggtt-tgttattattgttgttgcttgtggttactttgatattgatta 8154083  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg-cccggaattcacaaca 165  Q
    |||||||||||| || |||||||||||||||  |||| |||||||||||  || ||||||||||||    
T  8154084 ctactttcctttacttcacacatcatagttt--tattagtgtgattttgagcccgaattcacaaca 8154147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 8965588 - 8965509
Alignment:
Q  67 ttgttgttgcttatgtttactttgaaattggttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||| || ||||||||| |||||||||||| |||| ||||||||| |||||||||||  ||||||||||||||||    
T  8965588 ttgttgttgcttgtggttactttgatattggttactacgttcc-ttgctccacgcatcatagttt--tattggtgtgattttg 8965509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 32902150 - 32902028
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||| |||||||| | ||||||| |||||| |||||||||||||| ||  ||||||| ||||||||| ||  | || |||||| ||| ||||    
T  32902150 tatcttttgcttttggttttgtgtttttcac-ttggttcctagattagatctaggt-ttgttgttgttgttgttgtttgaggttgctttgatattagtta 32902053  T
Q  101 ctactt-tcctttgctccacacatc 124  Q
    |||||| || |||||||||||||||    
T  32902052 ctacttctcttttgctccacacatc 32902028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 7493284 - 7493352
Alignment:
Q  93 attggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    |||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||| || ||||||||||||    
T  7493284 attgattactactt-cctttgctccacacatcatagttt--tattggtgtgattttgtcc-gaattcacaaca 7493352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30291807 - 30291856
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagat 50  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  30291807 tatcttttgcttgtggttttgaactttccactttgattactagattagat 30291856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 3073843 - 3073712
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttat---gtttactttgaaattgg 97  Q
    |||||||||||||||||||||  || ||||||||  || |||||||| ||||| ||  ||||||| |||||| |||| ||   | ||||||||| | |||    
T  3073843 tatcttttgcttgtggttttgtactcttcacttta-ttcctagattaaatctaggtt-tgttgttgttgttgctgctcattgtggttactttgatactgg 3073746  T
Q  98 ttactactttcctttgctccacacatcatagttt 131  Q
    ||| ||||||||||||||||||| || |||||||    
T  3073745 ttattactttcctttgctccacatatgatagttt 3073712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 2628037 - 2628084
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtg 143  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  2628037 tggttactactttcctttgctccacacatctta-ctttgtattggtgtg 2628084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 4162692 - 4162800
Alignment:
Q  25 ttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttga----aattggttactactttcctttgctccaca 120  Q
    ||||||||||| || ||||||||||||||   ||| || |||||||||||| || || |||||||||    |||||||||| | ||| ||||||||| ||    
T  4162692 ttttcactttgattcctagattagatcta---ggttttattattgttgttgtttgtgattactttgatattaattggttaccatttttctttgctcctca 4162788  T
Q  121 catcatagtttt 132  Q
    |||||| |||||    
T  4162789 catcattgtttt 4162800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 6127909 - 6127875
Alignment:
Q  98 ttactactttcctttgctccacacatcatagtttt 132  Q
    |||||||||||||||| ||||||||||||||||||    
T  6127909 ttactactttcctttgttccacacatcatagtttt 6127875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 29796291 - 29796169
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||| || ||||| ||||| |||||   ||||||||||| |||||||   |||| ||||||||||||||   |  |||||||| | ||||||    
T  29796291 tatcttttgcttatgattttgtgctttacacttaa-ttactagattaaatctaagat-tgttattattgttgttgctcgagaatactttgatactggtta 29796194  T
Q  101 ctactttcctttgctccacacatca 125  Q
     ||||| | ||||||||||||||||    
T  29796193 ttacttccttttgctccacacatca 29796169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 2e-54; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 723711 - 723564
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||| || |||| ||||||| ||||||||    
T  723711 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgattgtgttcactttgatattggtta 723612  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  723611 ctactttcctttgctccacacatcatag-tttgtattggtgtgattttg 723564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 34139737 - 34139590
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  |||| ||||||||||||||| |||| ||||||| ||||||||    
T  34139737 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtcttgttattattgttgttgcttgtgttcactttgatattggtta 34139638  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34139637 ctactttcctttgctccacacatcatag-tttgtattggtgtgattttg 34139590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39285038 - 39285167
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||||||||||||    
T  39285038 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggtta 39285137  T
Q  101 ctactttcctttgctccacacatcatagtt 130  Q
    ||||||| ||||||||||||||||||||||    
T  39285138 ctacttttctttgctccacacatcatagtt 39285167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 14633792 - 14633645
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||| ||||||| ||||||||    
T  14633792 tatcttttgattgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattggtta 14633693  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  14633692 ctactttcctttgcttcacacatcatag-tttgtattggtgtgattttg 14633645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11067504 - 11067634
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||| ||||||| ||||||||    
T  11067504 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattggtta 11067603  T
Q  101 ctactttcctttgctccacacatcatagttt 131  Q
    |||||||||||||||||||||||||||||||    
T  11067604 ctactttcctttgctccacacatcatagttt 11067634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 33162419 - 33162271
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt-atgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||  ||||| |||||| |||||||    
T  33162419 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgttgtttgctttgatattggtt 33162320  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  33162319 actactttcctttgctccacacatcatag-tttgtattgatgtgattttg 33162271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 2334382 - 2334235
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||| |||||||||||||||  ||||||||||| |||| |||||||||||| ||| |||| ||||||||||||||| |||||||||||||||||||||    
T  2334382 tatcttgtgcttgtggttttgaagttttcactttgattaccagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggtta 2334283  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  2334282 ctactttcctttgcttcacacatcatag-tttgtattggtgtgattttg 2334235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 42362549 - 42362696
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||  ||| |||||||  |||||||    
T  42362549 tatcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgagttcactttgattttggtta 42362648  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42362649 ctactttcctttgctccacacatcatag-tttgtattggtgtgattttg 42362696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 36988040 - 36987892
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||| |||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| ||||||||||||||||||||    
T  36988040 tatcttttgcttgtggctttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgtttactttgaaattggtt 36987941  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36987940 actactttcctttgctccacacatcatag-tttgtattggtgtgattttg 36987892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 24885789 - 24885936
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| | ||||||||| ||| |||| ||||||| ||||||||    
T  24885789 tatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttatcattgttgtttcttgtgttcactttgatattggtta 24885888  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  24885889 ctattttcctttgctacacacatcatag-tttgtattggtgtgattttg 24885936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 29868072 - 29868214
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||||||||| |||||| |||    
T  29868072 tatcttgtgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttaaaattgatta 29868171  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||    
T  29868172 ctacttttctttgctccacacatcatag-tttgtattgctgtga 29868214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36317978 - 36317836
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| ||| |||| |||||| |||||||| |||||||||||||||||||||    
T  36317978 tatcttttgcttgtggttttgtgcttttcactttgattactagattaaatctaggtgttgttattattgctgttgcttgtgtttactttgaaattggtta 36317879  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||| |||| || ||||||||| | |||||||||||||||    
T  36317878 ctactttcatttgttctacacatcattg-tttgtattggtgtga 36317836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 214 - 594
Target Start/End: Original strand, 20923276 - 20923653
Alignment:
Q  214 tcacacttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgat 313  Q
    |||| ||||||||| ||||||||||  |||||||||||||| || | |||  ||||||| ||||||||||| | ||| ||||||||||| |||   | ||    
T  20923276 tcacgcttgtcaatcaaggaagcagggagaacaagtgttttatctaacaaatggaggaaaaaatggtccacacaaccggatcttgtgttcgataaacaat 20923375  T
Q  314 gtgtatctactgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaa 413  Q
    |||||||| ||| |  |||| |||| ||||| ||||| || | ||||||| | || | |||||| |||||||||||||||||||||||||||||||||||    
T  20923376 gtgtatctgctgcagtttccgaagatccttctgttatcgagaacaagtttgtgaggactgttgaccatgtacttttacttcattctgggccaatcaacaa 20923475  T
Q  414 gtttgaggtctcagactccaatcaatatttcactattggtgtgaactctatggctgatattgattggtggatttttcagaaatccaaaaggtatattaaa 513  Q
    |||  || |||| || | |  |    |||||   |||||| |||  ||| |||| ||| ||||| |||||||| ||||   | | | ||||| |||||||    
T  20923476 gttcaagatctctgatttcggttgtgatttc---attggtatgatatctgtggcagatgttgatcggtggattcttcatctaacaagaaggtctattaaa 20923572  T
Q  514 gagcttgtgctggacagtaggttaaaacaacgctataagataccttggtgcttatactcttgtcaaagtttacatcattta 594  Q
     | |||| |||||||| | ||||  | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  20923573 aatcttgagctggacatttggttcgagcaacgctataacataccttggtgcttattctcttgtcaaagtttacatcattta 20923653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 14202388 - 14202224
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||  ||| ||||||| |||| |||    
T  14202388 tatcttttgcttgtggttttaagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgcgttcactttgatattgatta 14202289  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg-cccggaattcacaaca 165  Q
    |||||||||||| ||||||| ||||||| ||||| ||||| |||||||| | | ||||||||||||    
T  14202288 ctactttcctttactccacatatcatag-tttgtgttggtatgattttgactccgaattcacaaca 14202224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 36773761 - 36773909
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt-atgtttactttgaaattggtt 99  Q
    |||||||||||||||||||||||||||||  |||  ||||||||||||||||| ||| |||| |||||||||||||||  ||||  |||||| |||||||    
T  36773761 tatcttttgcttgtggttttgagcttttcttttttattactagattagatctaggtgttgttattattgttgttgcttcttgttggctttgatattggtt 36773860  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  36773861 actactttcatttgctccacacatcatag-tttgtattggtgtgattttg 36773909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 38312443 - 38312591
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| ||||||||| |||| ||||||| |||||||    
T  38312443 tatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattgttgcttgtgttcactttgatattggtt 38312542  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  38312543 actactttcctttgctccacacatcattg-tttatattggtgtgattttg 38312591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 11151560 - 11151422
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||  || |||| ||||||||||||||| |||| ||||||| |||| |||    
T  11151560 tatcttttgtttgtggttttgagcttttcactttgattactagattagatctagctgttgttattattgttgttgcttgtgttcactttgatattgatta 11151461  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggt 140  Q
    |||||||  ||||||||||||||||||| |||||||||||    
T  11151460 ctacttttatttgctccacacatcatag-tttgtattggt 11151422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 6594969 - 6594821
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || || ||| |||| ||||||| |||||||    
T  6594969 tatcttttgcttgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattacttgtgttcactttgatattggtt 6594870  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  6594869 actactttactttgctccacacatcatag-tttgtattggtgtgattttg 6594821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 17057334 - 17057186
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||  || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  17057334 tatcttttgcttgtggttttgtgcttttcactttaattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggtt 17057235  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  17057234 actactttcctttgctctacacatcata-ttttgtattggtgtgattttg 17057186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 17085317 - 17085169
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||  || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  17085317 tatcttttgcttgtggttttgtgcttttcactttaattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggtt 17085218  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  17085217 actactttcctttgctctacacatcata-ttttgtattggtgtgattttg 17085169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 11049757 - 11049896
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactac 104  Q
    |||||||||||||||||  |||||||||||| || |||||||||||||| ||    || |||||||||||||||||| ||||||||| ||||||||||||    
T  11049757 ttttgcttgtggttttgtacttttcactttgattcctagattagatctaggt----ttattattgttgttgcttatgattactttgatattggttactac 11049852  T
Q  105 tttcctttgctccacacatcatagttttgtattggtgtgattttgc 150  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||    
T  11049853 tttcttttgctccacgcatcatagttt--tattggtgtgattttgc 11049896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2838149 - 2838273
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||| |||| || ||||||||| || |||||||||||| | ||||||    
T  2838149 tatcttttgcttgtggttttgagcttttcactttgattcctagattatatctaggtgttgttattgttgttgttgtttgtgtttactttgatagtggtta 2838248  T
Q  101 ctactttcctttgctccacacatca 125  Q
    |||||||||||| ||||||||||||    
T  2838249 ctactttcctttactccacacatca 2838273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 219 - 431
Target Start/End: Original strand, 39273853 - 39274065
Alignment:
Q  219 cttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgatgtgta 318  Q
    |||| |||||| ||||||||| ||||||||||||||||| ||| |  ||||| | ||||||| ||| |||||| |||||||||||||| | || |||||     
T  39273853 cttgccaattagggaagcagtgagaacaagtgttttgtccagccaatggaggtacaaatggtacacactaccaaatcttgtgtttgatagacgttgtgtc 39273952  T
Q  319 tctactgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaagtttg 418  Q
    ||| ||  |  |||| ||||||||| || |||||| | |||| |||| | ||||||||||||||||||||||||||| ||||| || ||||||||||| |    
T  39273953 tctgctagaggttcccaagaccctttagatattgagaacaagcttttgaaaattgttgatcatgtacttttacttcactctggacctatcaacaagttcg 39274052  T
Q  419 aggtctcagactc 431  Q
    || |||| |||||    
T  39274053 agttctctgactc 39274065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 36205625 - 36205463
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    |||||||||||||||   ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||  |||||||||||    
T  36205625 ttttgcttgtggtttct-gcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttacta 36205527  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaacat 166  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||||    
T  36205526 ctttcctttgctccacacatcatag-tttgtattagtgtgattttgagaccggaattcacaacat 36205463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 45099962 - 45100122
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||| ||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||||||    
T  45099962 ttttgcttgtgattt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttacta 45100060  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgattt-tgcccggaattcacaaca 165  Q
    ||||||||||||||||||||||||  || |||||||||||||||  | |||||||||||||||    
T  45100061 ctttcctttgctccacacatcata-attcgtattggtgtgatttgagaccggaattcacaaca 45100122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 5723220 - 5723056
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||| | |||||||  |||| || |||||||||||||| ||| |||| || ||| || ||| || || | ||||||| |||||||    
T  5723220 tatcttttgcttgtggttt-gtgcttttctttttgattcctagattagatctaggtgttgttattgttgattattgtttgtgctcactttgatattggtt 5723122  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga-ttttgcccggaattcacaaca 165  Q
    |||||||| |||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||    
T  5723121 actactttactttgctccacacatcatag-tttgtattggtgtgatttttgtacggaattcacaaca 5723056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 11690701 - 11690833
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||||||||   ||||||||||      |||||| |||| || |||| ||| ||||    
T  11690701 tatcttttgcttgtggttttgagcttttcactttaattcctagattagatcta---ggtgttgtta------ttgcttgtgttcac-ttgatattagtta 11690790  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  11690791 ctactttcctttgctccacacatcatag-tttgtattggtgtga 11690833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 4484292 - 4484127
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||||||||  ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||    | ||||||  |||||||    
T  4484292 tatcttgtgcttgtggttttt-gcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcactcactttgttattggtt 4484194  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattt-tgcccggaattcacaacat 166  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||  | ||||||||||||||||    
T  4484193 actactttcctttgctccacacatcata-tttcgtattggtgtgatttgagaccggaattcacaacat 4484127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 4503097 - 4502932
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||| ||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||   || ||||||  |||||||    
T  4503097 tatcttgtgcttgtg-ttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggtt 4502999  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattt-tgcccggaattcacaacat 166  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||  | ||||||||||||||||    
T  4502998 actactttcctttactccacacattatag-tttgtattggtgtgatttgagaccggaattcacaacat 4502932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 224 - 412
Target Start/End: Original strand, 20926884 - 20927073
Alignment:
Q  224 caattaaggaagcagtaagaacaagtgttttgtc-aagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgatgtgtatcta 322  Q
    |||||| ||||||||  |||||||||||||| || ||  ||  ||||||| ||| ||| ||| |||||| ||||||| |||||| ||| |||||| |||     
T  20926884 caattagggaagcagcgagaacaagtgttttatctaaaaaaatggaggaacaaagggtacacactaccaaatcttgtctttgatagtcaatgtgtctctg 20926983  T
Q  323 ctgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaaca 412  Q
    ||| | ||||||||||||  | |||||| |  || |||||||| | | ||| ||||||||| ||||||||||||| ||||||||||||||    
T  20926984 ctgcagcttccaaagacctgttagttatcgctaggaagtttttgaaatttgctgatcatgtccttttacttcattatgggccaatcaaca 20927073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 550 - 626
Target Start/End: Original strand, 20927202 - 20927278
Alignment:
Q  550 aagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtcttaaacctccaac 626  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || |  |||  ||||||||||||||||||||    
T  20927202 aagataccttggtgcttattctcttgtcaaagtttacatcatttaaaattacattggtgttgtcttaaacctccaac 20927278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 20952928 - 20952995
Alignment:
Q  345 agttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaaca 412  Q
    ||||||||| || ||||| || | ||||||||||||||||||||||||||||||||||||||||||||    
T  20952928 agttattgagaggaagttattgaaaattgttgatcatgtacttttacttcattctgggccaatcaaca 20952995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 26353382 - 26353495
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| | ||||||||||| |||     ||||||||||||    |||||||||||||| ||| || ||||||| | ||||||||    
T  26353382 tatcttttgcttgtggttttgtgtttttcactttgatta-----ttagatctaagtt---ttgttattgttgttccttgtgattactttaatattggtta 26353473  T
Q  101 ctactttcctttgctccacaca 122  Q
    |||||||||||||||| |||||    
T  26353474 ctactttcctttgctctacaca 26353495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 550 - 626
Target Start/End: Original strand, 20934586 - 20934662
Alignment:
Q  550 aagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtcttaaacctccaac 626  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  || |  |||  ||||||||||||||||||||    
T  20934586 aagataccttggtgcttattctcttgtcaaagtttacatcatttgaaattacatttctgttgtcttaaacctccaac 20934662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 550 - 626
Target Start/End: Original strand, 20953124 - 20953200
Alignment:
Q  550 aagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtcttaaacctccaac 626  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  || |  |||  ||||||||||||||||||||    
T  20953124 aagataccttggtgcttattctcttgtcaaagtttacatcatttgaaattacattggtgttgtcttaaacctccaac 20953200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 12123554 - 12123434
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||| |||||   ||||||||| | || ||||||||||| || ||  |||| || ||||||||| ||  | ||||||||| ||||||||    
T  12123554 tatcttttgcttgtgattttgtatttttcactt-gatttctagattagatataggtt-tgttattgttgttgttgtttgaggttactttgatattggtta 12123457  T
Q  101 ctactttcctttgctccacacat 123  Q
    |||||||||||||||||||||||    
T  12123456 ctactttcctttgctccacacat 12123434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 218 - 412
Target Start/End: Original strand, 20934263 - 20934457
Alignment:
Q  218 acttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgatgtgt 317  Q
    ||||| |||||| ||||||||| |||||||||||||| || |  ||  ||||||| ||||||| ||| || ||| |||||||||||||| | | |||| |    
T  20934263 acttgccaattagggaagcagtgagaacaagtgttttatctaaaaaatggaggaacaaatggtacacactcccaaatcttgtgtttgatagacaatgtct 20934362  T
Q  318 atctactgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaaca 412  Q
     ||| ||| | ||| | ||||| | | ||||||| | |  || ||||| | ||||||| ||  ||||||||||| ||||||||||||||||||||    
T  20934363 ctctgctgcagcttacgaagacacgttagttattcagatgaaatttttgaaaattgttaatagtgtacttttacatcattctgggccaatcaaca 20934457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1345666 - 1345733
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgtt 71  Q
    |||||| || ||||||||||||||||||||||||| || ||||||||||||||   |||||||||||||||    
T  1345666 tatcttatgattgtggttttgagcttttcactttgattcctagattagatcta---ggtgttgttattgtt 1345733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 30833646 - 30833697
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtgattt 147  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  30833646 tggttactactttcctttgctccacacatcata-tttcgtattggtgtgattt 30833697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 32289772 - 32289919
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||| ||||  ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||      ||||||  | |||||    
T  32289772 tatcttgtgcttgtg-ttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccactttgttagtggtt 32289870  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| |||||    
T  32289871 actactttcctttgctccacacatctta-ctttgtattggtgtggttttg 32289919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 23078700 - 23078759
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||| | |||||  ||||||||||||||  |||||||||||||||    
T  23078700 ttcctttgctccacacatctttgtttttcattggtgtgatttttaccggaattcacaaca 23078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 13121965 - 13122109
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt-atgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||  | ||||||||| | || |||||||| ||||| ||  |||| || |||||  ||||| ||||| | ||||| |||| ||    
T  13121965 tatcttttgcttgtggttttatgtttttcactt-gatttctagattacatctaggtt-tgttattgttgttactgcttgatgtt-attttgatattgatt 13122061  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    | |||||| |||| ||||||||||||||||||  ||||||||||||||||    
T  13122062 agtacttttctttactccacacatcatagttt--tattggtgtgattttg 13122109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 626
Target Start/End: Original strand, 39274180 - 39274260
Alignment:
Q  546 ctataagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtcttaaacctccaac 626  Q
    ||||||||||||||||||||||| ||| ||||||||||| || | |||| |  ||  || |||||| ||||||||||||||    
T  39274180 ctataagataccttggtgcttattctcctgtcaaagtttgcaacgtttaaagttggcttgttgttggcttaaacctccaac 39274260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 6266992 - 6267062
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaacat 166  Q
    ||||||| ||| |||||||||||||||||||||| |||  ||||||||| ||| | |||| |||||||||||    
T  6266992 tggttaccactctcctttgctccacacatcatag-tttacattggtgtggtttcgtccgggattcacaacat 6267062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 34388728 - 34388669
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||| | ||| | |||||||||||||||  || ||||||||||||    
T  34388728 ttcctttgctccacacatcttcgttatttattggtgtgatttttaccagaattcacaaca 34388669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 42039897 - 42039956
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||| | ||| |  ||||||||||||||  |||||||||||||||    
T  42039897 ttcctttgctccacacatctttgttattcattggtgtgatttttaccggaattcacaaca 42039956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 7815168 - 7815127
Alignment:
Q  83 ttactttgaaa-ttggttactactttcctttgctccacacat 123  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  7815168 ttactttgaaaattggttactactttcctttgctctacacat 7815127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30833552 - 30833612
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgtt 62  Q
    |||||| |||||||||||| | ||||||||||||| || |||||||||||||| ||| ||||    
T  30833552 tatcttgtgcttgtggttt-gtgcttttcactttgtttcctagattagatctaggtgttgtt 30833612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 10445661 - 10445732
Alignment:
Q  93 attggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    |||| |||| |||| | ||||||||||||||| | |||||  ||||||||||||||| || ||||||||||||    
T  10445661 attgattaccacttccttttgctccacacatctttgtttttcattggtgtgattttgtcc-gaattcacaaca 10445732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 16940437 - 16940497
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaacat 166  Q
    ||||||||||||||||||| | ||| |  |||||||||||||||  | |||||||||||||    
T  16940437 ttcctttgctccacacatctttgttattcattggtgtgattttgtaccgaattcacaacat 16940497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 17011102 - 17011162
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaacat 166  Q
    ||||||||||||||||||| | ||| |  |||||||||||||||  | |||||||||||||    
T  17011102 ttcctttgctccacacatctttgttattcattggtgtgattttgtaccgaattcacaacat 17011162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 21629819 - 21629761
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaacat 166  Q
    ||||||||||||||||||| | |||||  ||||||||||||||| || |||||||||||||    
T  21629819 ttcctttgctccacacatctttgtttt-cattggtgtgattttgtcc-gaattcacaacat 21629761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 6e-54; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 26175601 - 26175459
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||| | |||||| |||||||||||||||||||||    
T  26175601 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgctattgcttgtgtttactttgaaattggtta 26175502  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  26175501 ctactttcctttgctccacacatcatag-tttgtattggtgtga 26175459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 46147360 - 46147218
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  |||| ||||||||||||||| |||| ||||||| ||||||||    
T  46147360 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtattgttattattgttgttgcttgtgttcactttgatattggtta 46147261  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    
T  46147260 ctactttcctttgctccacacatcatag-tttgcattggtgtga 46147218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 12743890 - 12743751
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||||||||||   |||||||||||| ||||||||| |||||||||||||||||||||    
T  12743890 tatcttttgcttgtagttttgtgcttttcactttgattactagattagatcta---ggtgttgttattattgttgcttgtgtttactttgaaattggtta 12743794  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  12743793 ctactttcctttgctccacacaacatag-tttgtattggtgtga 12743751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 5872021 - 5872166
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||| || |||| ||||||| ||||||||    
T  5872021 tatcttttgcttttggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgtttgtgttcactttgatattggtta 5872120  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||    ||||||||||||||||||||    
T  5872121 ctactttcctttgctccacacatca---gtttgtattggtgtgattttg 5872166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 47038380 - 47038233
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||||| ||| || |||||||||||| ||||||||    
T  47038380 tatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgttattgtttgtgtttactttgatattggtta 47038281  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  47038280 ctactttcctttgttccacacatcatag-tttgtattggtgtgattttg 47038233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 12739515 - 12739376
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||   |||||||||||| || |||||| |||||||||||||||||||||    
T  12739515 tatcttttgcttgtggttttgtgcttttcactttgattacttgattagatcta---ggtgttgttattattattgcttgtgtttactttgaaattggtta 12739419  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||    
T  12739418 ctactttcttttactccacacatcatag-tttgtattggtgtga 12739376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 45687151 - 45687004
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttat-gtttactttgaaattggtt 99  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||| ||||||||||||||| | |||| |||||| |||||||    
T  45687151 tatctgttgcttgtggttttgagcttttcactttgattactagatt-gatctaggtgttgttattattgttgttgcttgttgtttgctttgatattggtt 45687053  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  45687052 actactttcctttgctccatacatcatag-tttgtattggtgtgattttg 45687004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 36463360 - 36463213
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||| ||||| ||||| |||| | |||||||||| ||| |||| ||||||||||||||| |||||||||||| ||||||||    
T  36463360 tatcttttgcttgtggttttgagtttttcgctttgattaccaaattagatctaggtgttgttattattgttgttgcttgtgtttactttgatattggtta 36463261  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
     ||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  36463260 ttactttcctttactccacacatcatag-tttgtattagtgtgattttg 36463213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 48893607 - 48893460
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||| ||||| ||||||||||||| ||  | ||||||||||| ||| |||| || ||||| |||||| |||||||||||| ||||||||    
T  48893607 tatcttttgcttgtgattttgtgcttttcactttgattcttggattagatctaggtgctgttattgttgttattgcttgtgtttactttgatattggtta 48893508  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48893507 ctactttcctttgctccacacatcatag-tttgtattggtgtgattttg 48893460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 52467323 - 52467180
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttg-ttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||| || |||||| | |||||||||| |||||||    
T  52467323 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctatgtgttgttattattgatgattgcttgtctttactttgatattggtt 52467224  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    || ||||||||||||| |||||||||||| |||||||||||||||    
T  52467223 accactttcctttgcttcacacatcatag-tttgtattggtgtga 52467180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 5370047 - 5369881
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||| ||    
T  5370047 tatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgatt 5369948  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||  | |||||||||||||||    
T  5369947 actactttcctttactccacacatcatag-tttgtattggtgtgattttgagaccggaattcacaaca 5369881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 56178601 - 56178453
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||  || |||||||||||||| ||| |||| || ||  || |||||| |||| ||||||| |||||||    
T  56178601 tatcttttgcttgtggttttgtgcttttcactttcattcctagattagatctaggtgttgttattgtttattattgcttgtgttcactttgatattggtt 56178502  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  56178501 actactttcctttgctccacacatcatag-tttgtattggtgtgattttg 56178453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 29254697 - 29254842
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||| |||| ||||||| |||| || |||| ||||| | ||||||||    
T  29254697 tatcttttgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattattgtcgttgtttgtgttcactttaatattggtta 29254796  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgatttt 148  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  29254797 ctacttt-ctttgctccacacatcatag-tttgtattagtgtgatttt 29254842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 48143247 - 48143417
Alignment:
Q  1 tatcttttgcttgtggttttgagctttt----cactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaatt 95  Q
    ||||||||||||||| ||||| ||||||    ||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||    
T  48143247 tatcttttgcttgtgattttgtgcttttttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatatt 48143346  T
Q  96 ggttactactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||    
T  48143347 ggttactactttcctttgctccacacatcatag-tttgtattggtgtgattttgagtccggaattcacaaca 48143417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36994722 - 36994824
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| ||||||||||||||||| |||    
T  36994722 tatcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattgatta 36994821  T
Q  101 cta 103  Q
    |||    
T  36994822 cta 36994824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 34570379 - 34570231
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| ||  ||||||||||||| ||| |||| || ||| || ||| || |||| | ||||| |||||||    
T  34570379 tatcttttgcttgtggttttgtgcttttcactttgattcttagattagatctaggtgttgttattgttgattattgtttgtgttcattttgatattggtt 34570280  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  34570279 actactttcctttgctccacacatcatag-tttatattggtgtgattttg 34570231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 9927424 - 9927293
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||| |||| ||||||||||||| || |||||||| ||||| ||| |||| || ||| || |||||| |||||||||||| ||||||     
T  9927424 tatcttttgcttgtggatttgtgcttttcactttgattcctagattaaatctaggtgctgttattgttgattattgcttgtgtttactttgatattggta 9927325  T
Q  100 actactttcctttgctccacacatcatagttt 131  Q
    ||||||||||||||||||||||||||||||||    
T  9927324 actactttcctttgctccacacatcatagttt 9927293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 37740828 - 37740971
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| || ||| |||||||||| ||| |||| || ||| || ||| || |||| ||||||| |||| ||    
T  37740828 tatcttttgcttgtggttttgtgcttttcactttgattcctacattagatctaggtgctgttattgttgattattgattctgttcactttgatattgatt 37740927  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||    
T  37740928 actactttcctgtgctccacacatcatag-tttgtattggtgtga 37740971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 31474350 - 31474494
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||| |||| || ||||| ||||||||||||  || |||||||||||||| ||| |||| || ||||||||| || |||||||||||| |||| |||    
T  31474350 tatctttagcttttgattttgtgcttttcactttaattcctagattagatctaggtgttgttattgttgttgttgtttgtgtttactttgatattgatta 31474449  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgatt 146  Q
    |||||||| |||||| |||||||||| | |||||||||||||||||    
T  31474450 ctactttcatttgctacacacatcattg-tttgtattggtgtgatt 31474494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 52082628 - 52082480
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||  |||||||  |||| || |||||| ||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  52082628 tatcttttgcttgtggttttatgcttttctttttgattcctagataagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggtt 52082529  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  52082528 actactttcctttgttccacacatcata-atttgtattggtgtgattttg 52082480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6542148 - 6542027
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||| |||||| ||||| | ||||||||||  || ||||||||||||||   ||| |||||||||||||||||| || ||||||||| ||||||||    
T  6542148 tatctttttcttgtgattttgtgtttttcactttaattcctagattagatcta---ggttttgttattgttgttgcttgtgattactttgatattggtta 6542052  T
Q  101 ctactttcctttgctccacacatca 125  Q
     ||||||||||||||||||||||||    
T  6542051 ttactttcctttgctccacacatca 6542027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 52095327 - 52095179
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||| |||||||||||| ||||||| |||||  | |||||||||||||| ||| |||| || ||| || || ||| |||| ||||||| |||| ||    
T  52095327 tatcttttccttgtggttttgtgcttttctctttgactcctagattagatctaggtgttgttattgttgattattacttgtgttcactttgatattgatt 52095228  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  52095227 actactttcctttgttccacacgtcatag-tttgtattggtgtgattttg 52095179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 54199869 - 54199725
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    |||||||||||| |||| ||||||||||||| ||  ||||||||||||| ||| |||| ||  || || |||||| |||| ||||||| | |||||||||    
T  54199869 ttttgcttgtggatttgtgcttttcactttgattcttagattagatctaggtgatgttattgctgattattgcttgtgttcactttgatactggttacta 54199770  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||    
T  54199769 ctttcctttgctccatacatcatcg-tttgtattggtgtgattttg 54199725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 29999709 - 29999628
Alignment:
Q  85 actttgaaattggttactactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||    
T  29999709 actttgatattggttactactttcctttgctccacacatcatag-tttgtattggtgtgattttgagaccggaattcacaaca 29999628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 4588158 - 4588279
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||| ||||| ||||||||||||| || ||| ||||||| |   |||| ||||||||||||||| || || || |||||| | ||||||    
T  4588158 tatcttttgcttgtgattttgtgcttttcactttgattcctatattagatat---tggttttgttattgttgttgtttgtgattgctttgatagtggtta 4588254  T
Q  101 ctactttcctttgctccacacatca 125  Q
    ||| |||||||||||||||||||||    
T  4588255 ctattttcctttgctccacacatca 4588279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 216 - 417
Target Start/End: Original strand, 21237336 - 21237537
Alignment:
Q  216 acacttgtcaattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgatgt 315  Q
    ||||||| |||||||||||||| | ||||||||||| || || |||||  |||| || ||||||| |||| | ||| |||||||||| |||   |  |||    
T  21237336 acacttgccaattaaggaagcattgagaacaagtgtattatccagcaaatggagaaacaaatggtacactatgccaaatcttgtgttcgataaacattgt 21237435  T
Q  316 gtatctactgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaagt 415  Q
    || |||  || |||||   |||||||||||| |||    | ||||||||| ||||||||||||||||||||| |||||||||||||| ||||  ||||||    
T  21237436 gtctctgatgcaacttttcaagacccttcaggtatcagtaacaagtttttgagaattgttgatcatgtacttctacttcattctgggtcaattgacaagt 21237535  T
Q  416 tt 417  Q
    ||    
T  21237536 tt 21237537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5429882 - 5429989
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||| |||||||||||||||||||||||||| || |||||||||||||| ||| |||| || ||| || ||| || |||| ||||||| |||| ||    
T  5429882 tatcttttacttgtggttttgagcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattgatt 5429981  T
Q  100 actacttt 107  Q
    ||||||||    
T  5429982 actacttt 5429989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 547 - 626
Target Start/End: Original strand, 21237664 - 21237743
Alignment:
Q  547 tataagataccttggtgcttatactcttgtcaaagtttacatcatttagaactgaattattgttgtcttaaacctccaac 626  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| | |    |||||| ||||||||||||||    
T  21237664 tataagataccttggtgcttattctcttgtcaaagtttacatcatttagaattaacaagttgttggcttaaacctccaac 21237743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 13992251 - 13992112
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||| ||| | ||||||||||||| |  |||||||||||||| ||| |||| || ||| || ||||||    | ||||||  |||||||||||    
T  13992251 ttttgcttgtgattt-gtgcttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcactcactttgttattggttacta 13992153  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgat 145  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  13992152 ctttcctttgctccacacatcata-tttcgtattggtgtgat 13992112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 5207809 - 5207668
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||| |||| |||||||||| ||||||||||| | || ||| |||||||||| ||    ||| ||||||||||||||  | ||||||||| ||   |||    
T  5207809 tatctgttgcatgtggttttgtgcttttcactt-gattcctaaattagatctaggt----ttgatattgttgttgcttgaggttactttgatatcaatta 5207715  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||| ||||  ||| ||||||||||||||||    
T  5207714 ctactttcctttgctccacacaccata--tttatattggtgtgattttg 5207668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 37229690 - 37229561
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||| ||| |||||||| ||||||||||||  || ||| |||||||||| || | ||| || ||||| |||||| |  ||||||||| ||||||||    
T  37229690 tatcttttacttatggttttgtgcttttcacttta-ttcctaaattagatctaggttg-gttattgttgttattgcttgttgttactttgatattggtta 37229593  T
Q  101 ctactttcctttgctccacacatcatagtttt 132  Q
    |||||| || |||||||||||| |||||||||    
T  37229592 ctacttcccattgctccacacaacatagtttt 37229561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 51338334 - 51338392
Alignment:
Q  61 ttgttattgttgttgcttatgtttactttgaaattggttactactttcctttgctccac 119  Q
    |||||||||||||||||| ||  |||||||| |||| ||||||||||| ||||||||||    
T  51338334 ttgttattgttgttgcttgtgactactttgatattgattactactttcatttgctccac 51338392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 31495174 - 31495130
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggt 140  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||    
T  31495174 tggttactactttcctttgctccacacatcata-tttcgtattggt 31495130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 48142268 - 48142206
Alignment:
Q  83 ttactttgaaattggttactactttcctttgctccacacatcatagttttgtattggtgtgattt 147  Q
    ||||||| | |||||||| |||||||||||||||||||||||  |||||  ||||||||||||||    
T  48142268 ttactttaatattggttattactttcctttgctccacacatctaagttt--tattggtgtgattt 48142206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 24969933 - 24969982
Alignment:
Q  67 ttgttgttgcttatgtttactttgaaattggttactactttcctttgctc 116  Q
    ||||||||| || || ||| ||||| ||||||||||||||||||||||||    
T  24969933 ttgttgttggttgtgattattttgatattggttactactttcctttgctc 24969982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39593701 - 39593649
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatcta 53  Q
    ||||||||||||| ||||||| ||||||   ||||||| ||||||||||||||    
T  39593701 tatcttttgcttgcggttttgtgcttttacatttggtttctagattagatcta 39593649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 4e-52; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 37439345 - 37439511
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||| |||||||||||||| |||||||| |||| ||||||||||||| ||| ||| |||| ||||||||||||||| |||||||||||||||||||||    
T  37439345 tatcttatgcttgtggttttgtgcttttcattttgattactagattagacctaggtgttgttattattgttgttgcttgtgtttactttgaaattggtta 37439444  T
Q  101 ctactttcctttgctccacacatcatag--ttttgtattggtgtgattttgcccggaattcacaacat 166  Q
    |||| ||| |||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  37439445 ctac-ttcttttgctccacacatcatagttttttgtattggtgtgattttgtccggaattcacaacat 37439511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 538224 - 538366
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||  || |||| ||||||||||||||| |||||||||||||||||||||    
T  538224 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctagatgttgttattattgttgttgcttgtgtttactttgaaattggtta 538323  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
     ||||||||||||||||||||||||||| ||| |||||||||||    
T  538324 ttactttcctttgctccacacatcatag-tttatattggtgtga 538366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 42428395 - 42428253
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||| ||||||||| |||| ||||||| ||||||||    
T  42428395 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgttcactttgatattggtta 42428296  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  42428295 ctactttcctttgctccacacatcatag-tttgtattggtgtga 42428253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 224 - 594
Target Start/End: Original strand, 17969670 - 17970037
Alignment:
Q  224 caattaaggaagcagtaagaacaagtgttttgtcaagcaatcggaggaagaaatggtccactctaccagatcttgtgtttgatcgtcgatgtgtatctac 323  Q
    |||| ||||||||||  |||||||||||||| || |||||  ||| |||||||||||| || | ||||||||||||||||||| | | ||||||||||||    
T  17969670 caatcaaggaagcagggagaacaagtgttttatcgagcaaatggaagaagaaatggtctacccaaccagatcttgtgtttgatagacaatgtgtatctac 17969769  T
Q  324 tgaaacttccaaagacccttcagttattgacagcaagtttttaagaattgttgatcatgtacttttacttcattctgggccaatcaacaagtttgaggtc 423  Q
    || | ||||| |||||  ||||||||| ||  |||||||||| |||||  ||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  17969770 tgtagcttccgaagacttttcagttatcgagggcaagtttttgagaatcattgatcatgtacttttacttcattcagggccaatcaacaagtttgaagtc 17969869  T
Q  424 tcagactccaatcaatat-ttcactattggtgtgaactctatggctgatattgattggtggatttttcagaaatccaaaaggtatattaaagagcttgtg 522  Q
     | |||||   | ||| |  || |  ||||||||||||||||||||||| ||||| |||||||| ||||   | |   ||| | | ||||||||||||||    
T  17969870 actgactc---tgaatgtgatctc-cttggtgtgaactctatggctgatgttgatcggtggattcttcatctaactggaagatctgttaaagagcttgtg 17969965  T
Q  523 ctggacagtaggttaaaacaacgctataagataccttggtgcttatactcttgtcaaagtttacatcattta 594  Q
     |||||| | ||  |    ||| |||||||||||||||||||||||  |||| |||||||||||||||||||    
T  17969966 ttggacatttgggcaggggaactctataagataccttggtgcttattttcttatcaaagtttacatcattta 17970037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 13239955 - 13240102
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||| |||| || |||||||||||| |||||||||| ||||||||||    
T  13239955 tatcttttgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattgttgttgttgcttgtgtttactttaaaattggtta 13240054  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  13240055 ctactttcctttactccacacatcatag-tttgtattagtgtgattttg 13240102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 28750616 - 28750478
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactac 104  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||| ||| |||| ||||||||||||||| |||||||||| ||||||||||||||    
T  28750616 ttttgcttgtggttttgtgcttttcacttggattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttaaaattggttactac 28750517  T
Q  105 tttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  28750516 tttcctttgctccacacatcata-atttgtattggtgtga 28750478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 42426200 - 42426058
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||| |||||||| |||| ||||||| ||||||||    
T  42426200 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgatgttgcttgtgttcactttgatattggtta 42426101  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||    
T  42426100 ctactttcttttgctccacacatcatag-tttgtatttgtgtga 42426058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 8565915 - 8565765
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtg---ttgttattgttgttgcttatgtttactttgaaattgg 97  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||   || ||||||||||||||| |||| ||||||  |||||    
T  8565915 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgttgcttgtgttcactttgttattgg 8565816  T
Q  98 ttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  8565815 ttactactttcctttgctccacacatcatag-tttatattagtgtgattttg 8565765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 7 - 149
Target Start/End: Original strand, 31183183 - 31183324
Alignment:
Q  7 ttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactactt 106  Q
    ||||||||||||||||||||||||||||| |||||||||||||| || ||| |||| ||||| ||||||||| ||||  |||||| ||| ||||||||||    
T  31183183 ttgcttgtggttttgagcttttcactttgattactagattagatataggtgttgttattatttttgttgcttgtgttccctttgatattagttactactt 31183282  T
Q  107 tcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  31183283 tcctttgctccacacatcat-ggtttgtattggtgtgattttg 31183324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 13488406 - 13488546
Alignment:
Q  3 tcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttact 102  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| |||||| | ||| || |||| |||||||||||||||| |    
T  13488406 tcttttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgctattgattgtgttcactttgaaattggttatt 13488505  T
Q  103 actttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  13488506 actttcctttactccacacatcata-ttttgtattggtgtga 13488546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 19806566 - 19806705
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| || ||| |||| |||||| | |||| |||||| ||||| ||||||||||    
T  19806566 tatcttttgcttgtggtttttagcttttcactttgattactagattagatttaggtgttgttattattgctattgcctatgttcactttaaaattggtta 19806665  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtg 141  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  19806666 ctactttcctttgccccacacatcatag-tttgtattggtg 19806705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 5887401 - 5887252
Alignment:
Q  1 tatcttttgctt--gtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggt 98  Q
    ||||||||||||  |||||||| || |||||| |||| |||||||||||||| || ||| |||| ||||||||||||||| |||| ||||||| ||||||    
T  5887401 tatcttttgcttttgtggttttaagtttttcattttgattactagattagatttaggtgttgttattattgttgttgcttgtgttcactttgatattggt 5887302  T
Q  99 tactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  5887301 tactactttcctttgctccacatatcatag-tttgtattggtgtgattttg 5887252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 32637027 - 32637169
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||| |||||||| ||||||| ||||||||||| ||||||||||||||||| ||| |||| |||||| |||||||| |||||| | ||||||| ||||    
T  32637027 tatcttgtgcttgtgattttgagtttttcactttgattactagattagatctaggtgttgttattattgatgttgcttgtgtttagtgtgaaatttgtta 32637126  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||| ||||||||||||||| |||||||||||||||    
T  32637127 ctactttcctttactccacacatcatag-tttgtattggtgtga 32637169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 533968 - 534104
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||      ||| |||| ||||| ||||||||| ||| |||||||||||||||||    
T  533968 tatcttttgcttgtggttttgagattttcactttgattactagattag------gtgttgttattattattgttgcttgtgtctactttgaaattggtta 534061  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  534062 ctactttcctttgctccacacatcatag-tttctattggtgtga 534104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 16649799 - 16649652
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| |||||| |  | ||| |||| |||||||   ||||||    
T  16649799 tatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgctactacttgtgttcactttgattgtggtta 16649700  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  16649699 ctactttcctttgctccacacatcatag-tttgtattggtatgattttg 16649652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30682888 - 30682745
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||  |||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  30682888 tatcttttgcttgtgaatttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggtt 30682789  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  30682788 actactttcctttgctccacacatcatag-tttgtattggtgtga 30682745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 42927099 - 42927219
Alignment:
Q  4 cttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttacta 103  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||| ||| |||| || |||||||||||| |||||||||||| ||| ||| |||    
T  42927099 cttttgcttgtggttttgagtttttcactttgattcctagattagatctaggtgttgttattgttgttgttgcttgtgtttactttgatattagttgcta 42927198  T
Q  104 ctttcctttgctccacacatc 124  Q
    |||||||||||||||||||||    
T  42927199 ctttcctttgctccacacatc 42927219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 39468514 - 39468373
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||| ||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||| || |||| ||||||| |||||||    
T  39468514 tatcttgtgctcgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggtt 39468415  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgt 142  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  39468414 actactttcctttgctccacacatcatag-tttgtattggtgt 39468373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33831881 - 33832029
Alignment:
Q  1 tatcttttgcttgtggttttgagctttt-cactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||| ||||||||||| ||||||| || ||||||||||| || ||| || | || ||||| |||||| |||| |||||||  ||||||    
T  33831881 tatcttttgcttgtggctttgagctttttcactttgattcctagattagatttaggtgctgctattgttgttattgcttgtgttcactttgattttggtt 33831980  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||    
T  33831981 actactttcctttgctccacacatcatag-tttgtatttgtgtaattttg 33832029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 16452286 - 16452402
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactac 104  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||| ||   |||||||||||||||||| ||||||| || | |||||||||||     
T  16452286 ttttgcttgtggttttgagcttttcaatttgattcctagattagatctaactg---ttgttattgttgttgcttgtgtttacgttaatattggttactat 16452382  T
Q  105 tttcctttgctccacacatc 124  Q
    |||||||| |||||||||||    
T  16452383 tttcctttactccacacatc 16452402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 30182792 - 30182957
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||| ||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||| ||   || ||||||  |||||||    
T  30182792 tatcttgtgcttgtg-ttttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgtttgcattcactttgttattggtt 30182890  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||  | |||||||||||||||    
T  30182891 actactttcctttgctccacacatcatag-tttgttttggtgtgattttgagaccggaattcacaaca 30182957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 25412964 - 25413130
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||| | ||||||| ||||| || ||||||||||| || ||| |||| || ||| || |||||| || | |||| || |||| ||    
T  25412964 tatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatataggtgctgttattgttgattattgcttgtgctcacttggatattgatt 25413062  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg--cccggaattcacaacat 166  Q
    |||| |||||||||||||||||||||||| || |||||||||||||||||   ||||||||||||||||    
T  25413063 actaatttcctttgctccacacatcatag-ttcgtattggtgtgattttgaaaccggaattcacaacat 25413130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 13343268 - 13343429
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||||||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||   || ||||||  |||||||||||    
T  13343268 ttttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgcattcactttgttattggttacta 13343366  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgattttg--cccggaattcacaaca 165  Q
    ||||||||||||||||||||||||| || ||||| |||||| ||||   |||||||||||||||    
T  13343367 ctttcctttgctccacacatcatag-ttcgtattagtgtgactttgttaccggaattcacaaca 13343429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 36074003 - 36073843
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||| ||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||   || ||||||  |||||||| ||    
T  36074003 ttttgcttgtgattt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttatta 36073905  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgt-gattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||||||||| ||||||||||||| | |||||  ||||||||||||||    
T  36073904 ctttcctttgctccacacatcatag-tttgtattggtgtggtttttgtacggaattcacaaca 36073843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 16409683 - 16409846
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||| ||||  ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||      ||||||  | |||||    
T  16409683 tatcttgtgcttgtg-ttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccactttgttagtggtt 16409781  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||    
T  16409782 actactttcctttgctccacacatcata-ctttgtattggtgtgattttgtacggaattcacaaca 16409846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 3075629 - 3075572
Alignment:
Q  86 ctttgaaattggttactactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  3075629 ctttgatattggttattactttcctttgctccacacatcatag-tttgtattggtgtga 3075572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 9789092 - 9789039
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  9789092 tggttactactttcctttgctccacacatcata-ctttgtattggtgtggttttg 9789039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 18441512 - 18441459
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||||| ||  |||||||||||||| |||||    
T  18441512 tggttactactttcctttgctccacacatctta-ctttgtattggtgtggttttg 18441459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 26178090 - 26178237
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||| ||||  ||||||||||||| || |||||||||||||| ||| |||| | |||| || ||||||      ||||||  | |||||    
T  26178090 tatcttgtgcttgtg-ttttatgcttttcactttgattcctagattagatctaggtgttgttatcattgattattgcttgcacacactttgttagtggtt 26178188  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||| ||  || ||||||||||| |||||    
T  26178189 actactttcctttgctccacacatctta-cttcgtattggtgtggttttg 26178237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 14520098 - 14520039
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||| | ||| |  ||||||||||||||  |||||||||||||||    
T  14520098 ttcctttgctccacacatctttgttattcattggtgtgattttcaccggaattcacaaca 14520039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 149
Target Start/End: Complemental strand, 42309930 - 42309841
Alignment:
Q  59 tgttgttattgttgttgcttatgtttactttgaaattggttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||| || ||||| ||| || |||||  ||||||||||||| || ||||| | |||||  |||| ||||||||||    
T  42309930 tgttgttattgttgttgcttgtgattactatgatataggttatcactttcctttgctgcatacatctttgtttt-cattgatgtgattttg 42309841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 29751025 - 29750976
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagtt-ttgtattggtgtg 143  Q
    ||||||| ||| ||||||||||||||||||||| || |||||||||||||    
T  29751025 tggttaccactctcctttgctccacacatcatatttcttgtattggtgtg 29750976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 2e-51; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 14069798 - 14069656
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||| ||||||||| |||||||||||||||| ||||    
T  14069798 tatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgtttactttgaaattagtta 14069699  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  14069698 ctactttcctttgctccacacatcatag-tttgtattggtgtga 14069656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 14379826 - 14379684
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||| ||||||||| |||||||||||||||| ||||    
T  14379826 tatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattattgttgcttgtgtttactttgaaattagtta 14379727  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  14379726 ctactttcctttgctccacacatcatag-tttgtattggtgtga 14379684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 41317403 - 41317261
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||| ||||||| ||||||||    
T  41317403 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattggtta 41317304  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  41317303 ctactttcctttgctccaaacatcatag-tttgtattggtgtga 41317261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 47676101 - 47675959
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||| ||||||| ||||||||    
T  47676101 tatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgttcactttgatattggtta 47676002  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  47676001 ctactttcctttgctccacacatcatag-tttgtattggtgtga 47675959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 19502389 - 19502524
Alignment:
Q  8 tgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactacttt 107  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| | ||||||||||||||||||||||||||    
T  19502389 tgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtatttactttgaaattggttactacttt 19502488  T
Q  108 cctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  19502489 cctttgctccacacatcatag-tttgtattagtgtga 19502524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 41648978 - 41648831
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| || | || ||||| |||||| |||| ||||||| ||| ||||    
T  41648978 tatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgctattgttgttattgcttgtgttcactttgatattagtta 41648879  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41648878 ctactttcctttgctccacacatcatag-tttgtattggtgtgattttg 41648831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 31105357 - 31105223
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactac 104  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||   ||||||||||||||||||||||| |||||||||||| |||| |||||||    
T  31105357 ttttgcttgtggttttgagcttttcactttgattcctagattagatct---tggtgttgttattgttgttgcttgtgtttactttgatattgattactac 31105261  T
Q  105 tttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||| ||||||||||||||||||  |||||||||||    
T  31105260 tttcctttactccacacatcatagttt--tattggtgtga 31105223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 36146377 - 36146229
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt-atgtttactttgaaattggtt 99  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||  || |||| |||||||||||||||  ||||| |||||| |||||||    
T  36146377 tatcttttgcttgtggtttttagcttttcactttgattactagattagatctagatgttgttattattgttgttgcttgttgtttgctttgatattggtt 36146278  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||    
T  36146277 actactttcctttgctccacacatcatag-tttgtatttgtgtaattttg 36146229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 8153541 - 8153688
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||| |||| ||||||||||||||| || | ||||||| |||| |||    
T  8153541 tatcttttgcttgtggttttgagcttttcactttgattattagatcagatctaggtgttgttattattgttgttgcttgtgctcactttgatattgatta 8153640  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  8153641 ctactttcctttgctccacgcatcatag-tttgtattagtgtgattttg 8153688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 38671189 - 38671042
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||  ||||||| ||||||| |||| |||||||  || ||||    
T  38671189 tatcttttgcttgtggttttgagcttttcactttgattactagatttgatctaggtgttgtcattattgtcgttgcttgtgttcactttgatttttgtta 38671090  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  38671089 ctattttcctttgctccacacatcatag-tttgtattggtgtgattttg 38671042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 47673909 - 47673767
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||||||||| ||| |||| |||||||||||| || |||| ||||||| ||||||||    
T  47673909 tatcttttgcttgtggttttgtacttttcactttgattactagattagatctaggtgttgttattattgttgttgtttgtgttcactttgatattggtta 47673810  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||| |||| |||||||||||||| |||||||||||||||    
T  47673809 ctactttcttttgttccacacatcatag-tttgtattggtgtga 47673767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 48489634 - 48489782
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||| ||||| ||||||| |||||||    
T  48489634 tatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgctcatgttcactttgatattggtt 48489733  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  48489734 actactttcctttgctccacacatcatag-ttggtattggtgtgattttg 48489782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 30024714 - 30024609
Alignment:
Q  8 tgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactacttt 107  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  30024714 tgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgaaattggttactacttt 30024615  T
Q  108 cctttg 113  Q
    ||||||    
T  30024614 cctttg 30024609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 31732934 - 31732791
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  | |||| || ||| || |||||| |||| |||||||||||||||    
T  31732934 tatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaaaggttgttattgttgattattgcttgtgttcactttgaaattggtt 31732835  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||    
T  31732834 actactttcatttgctccacacatcatag-tttgtactggtgtga 31732791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 24525471 - 24525323
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt-atgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||| ||| |||| |||||||||||||||  ||||| |||||| |||| ||    
T  24525471 tatcttttgcttgtggttttgagcttttcactttgattactaaatttgatctaggtgttgttattattgttgttgcttgttgtttgctttgatattgatt 24525372  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||| ||||||| |||| ||||||| ||||||||| ||||||||||    
T  24525371 actacttttctttgctacacatatcatag-tttgtattgatgtgattttg 24525323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 25616058 - 25616206
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||||||||| ||||||||||| | || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  25616058 tatcttgtgcttgtggttttgtgcttttcacttcgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggtt 25616157  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  25616158 actactttcctttgctccatacatcatag-tttgtattggtgtgattttg 25616206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18126849 - 18126992
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||| ||    
T  18126849 tatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattcttgattattgcttgtgttcactttgatattgatt 18126948  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  18126949 actactttcctttactccacacatcatag-tttgtattggtgtga 18126992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 4586364 - 4586495
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| || ||  || |||||| |||| |||||||||||||||    
T  4586364 tatcttttgtttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattgtttattattgcttgtgttcactttgaaattggtt 4586463  T
Q  100 actactttcctttgctccacacatcatagttt 131  Q
    || |||||||||||||||||||||||||||||    
T  4586464 accactttcctttgctccacacatcatagttt 4586495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 23555244 - 23555387
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||| ||| | |||| |||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  23555244 tatcttttgcttgtggtattgtgttttttactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggtt 23555343  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  23555344 actactttcctttgctccacacatcatag-tttgtattggtgtga 23555387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 26417519 - 26417662
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||| ||||| ||| |||| || ||| || |||||| || ||||||||| |||||||    
T  26417519 tatcttttgcttgtggttttgagcttttcactttgattcatagattatatctaggtgctgttattgttgattattgcttgtggttactttgatattggtt 26417618  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||    
T  26417619 actactttcctttactccacatatcatag-tttgtattggtgtga 26417662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 43864447 - 43864590
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||| ||    
T  43864447 tatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgatt 43864546  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    || |||||||||| ||||||||||||||| |||||||||||||||    
T  43864547 accactttcctttactccacacatcatag-tttgtattggtgtga 43864590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 1113856 - 1113998
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| | |||||| |||| || |||||||||||||| ||| | || || ||||| |||||| |||||||||||| ||| ||||    
T  1113856 tatcttttgcttgtggttttgtgtttttcattttgattcctagattagatctaggtgttattattgttgttattgcttgtgtttactttgatattagtta 1113955  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    | |||||||||||||||||||||||||| ||||||||| |||||    
T  1113956 ccactttcctttgctccacacatcatag-tttgtattgatgtga 1113998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 27348020 - 27348168
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| | ||||||||||| || |||||||||||||| ||| |||| || ||| || ||| || |||| ||||||| |||||||    
T  27348020 tatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggtt 27348119  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
     |||||||||||||||||||||||||||  |||||||| |||||||||||    
T  27348120 gctactttcctttgctccacacatcata-atttgtatttgtgtgattttg 27348168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 35854120 - 35854267
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||| ||||  ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||| || |||| ||||||| |||||||    
T  35854120 tatcttgtgcttgtg-ttttatgcttttcactttgcttcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggtt 35854218  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  35854219 actactttcctttgctccacacatcatag-tttgtatttgtgtgattttg 35854267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 495928 - 495805
Alignment:
Q  25 ttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactactttcctttgctccacacatc 124  Q
    ||||||||||| || |||||||||||||| ||| |||| || ||||| ||| || |||||||||||| |||||||||||||||||||||||||||| |||    
T  495928 ttttcactttgattcctagattagatctaggtgttgttattgttgttattgtttgtgtttactttgatattggttactactttcctttgctccacatatc 495829  T
Q  125 atagttttgtattggtgtgattttg 149  Q
    |||  |||||||| |||||||||||    
T  495828 ata-atttgtattagtgtgattttg 495805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 4178981 - 4179122
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||||||| | | ||||||||||| || |||||||||||||| ||| |||| || ||| || |||||||  || ||||||  |||||||||||    
T  4178981 ttttgcttgtggttt-gtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttacattcactttgttattggttacta 4179079  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgattt 147  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  4179080 ctttcctttgctccacacatcatag-tttgtattggtgtgattt 4179122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 23344172 - 23344315
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||| || |||| ||||||| | ||||||||||| ||  ||||||| |||||   ||| |||||||||||||||||| || |||||| || ||||||||    
T  23344172 tatctctttcttgcggttttgtgtttttcactttgattcgtagattaaatcta---ggttttgttattgttgttgcttgtggttacttggatattggtta 23344268  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  23344269 ctactttcctttgctccacacatcatagttt--tattgatgtgattttg 23344315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 48491779 - 48491927
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| |||||||| |||| || ||| |||||||||| | | |||| || ||| || |||||| |||| ||||||| |||||||    
T  48491779 tatcttttgcttgtggttttgtgcttttcattttgattcctatattagatctaggcgttgttattgttgattattgcttgtgttcactttgatattggtt 48491878  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||| |||| ||||| |||| || |||||||||||||||||    
T  48491879 actactttcctttactccgcacattatag-ttggtattggtgtgattttg 48491927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 29991257 - 29991404
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||| | ||||||| ||||| || ||| |||||||||| ||| |||| || ||| || || ||| || | ||||||| |||||||    
T  29991257 tatcttttgcttgtggttt-gtgcttttctctttgattcctatattagatctaggtgttgttattgttgattattacttgtgctcactttgatattggtt 29991355  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||| |||||||||||||||||||| ||||||||||||||| ||||    
T  29991356 actacttttctttgctccacacatcatag-tttgtattggtgtgactttg 29991404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 23565031 - 23564910
Alignment:
Q  1 tatcttttgcttgtggtttt-gagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||||||| | | ||||||||||| || ||||||||||||||   ||| |||||||||||||||||| || ||||||||| ||||||     
T  23565031 tatcttttgcttgtggtttttgtgattttcactttgatttctagattagatcta---ggttttgttattgttgttgcttgtggttactttgatattggtc 23564935  T
Q  100 actactttcctttgctccacacatc 124  Q
    |||||||| |||  |||||||||||    
T  23564934 actacttttcttcactccacacatc 23564910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 48409015 - 48409156
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||| ||| | ||||||||||||| |  |||||||||||||| ||| |||| || ||| || ||||||    | ||||||  |||||||||||    
T  48409015 ttttgcttgtgattt-gtgcttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcactcactttgttattggttacta 48409113  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgattt 147  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  48409114 ctttcctttgctccacacatcata-tttcgtattggtgtgattt 48409156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 165
Target Start/End: Complemental strand, 25766898 - 25766757
Alignment:
Q  25 ttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttactactttcctttgctccacacat 123  Q
    ||||||||||| |  |||||||||||||| ||| |||| || ||| || ||||||  | | ||||||  ||||||||||||||| |||||||||||||||    
T  25766898 ttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcgctcactttgttattggttactacttttctttgctccacacat 25766799  T
Q  124 catagttttgtattggtgtgattt-tgcccggaattcacaaca 165  Q
    |||| ||| |||||||||||||||  | |||||||||||||||    
T  25766798 cata-tttcgtattggtgtgatttgagaccggaattcacaaca 25766757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 12097084 - 12096999
Alignment:
Q  46 tagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactactttcctttgctccacacatcatagttt 131  Q
    |||||||| ||| ||||||||||||||||| || |||| ||||||| ||||||||||||||||||||  ||||  |||||||||||    
T  12097084 tagatctaggtgttgttgttattgttgttgattgtgttcactttgatattggttactactttcctttattccaagcatcatagttt 12096999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 31519116 - 31519217
Alignment:
Q  23 gcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactactttcctttgctccacaca 122  Q
    ||||||||||||| || |||||||||||||| ||| |||| ||||||||| |||||||| |||| |||| |||  |||||| |||  |||||||||||||    
T  31519116 gcttttcactttgattcctagattagatctaggtgttgttattattgttgctgcttatgattacattgatattaattactatttttatttgctccacaca 31519215  T
Q  123 tc 124  Q
    ||    
T  31519216 tc 31519217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12097836 - 12097789
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattag 48  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12097836 tatcttttgcttgtggttttgagcttttcactttgattactagattag 12097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 39731575 - 39731739
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||||||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||      ||||||  |||||||    
T  39731575 tatcttgtgcttgtggttt-gtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccactttgttattggtt 39731673  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    |||||||| ||||| |  ||| |||||| |||  |||||||||| ||||| |||||||||||||||    
T  39731674 actacttttctttgttttacatatcatactttgttattggtgtggttttgtccggaattcacaaca 39731739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 36574485 - 36574364
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||| |||||||||||| | ||||||| ||| || |||||||||||||||||  |||| || ||||||| || |  | ||||||||| ||||||||    
T  36574485 tatctttttcttgtggttttgtgtttttcac-ttgattcctagattagatctaagt-ttgttattgttgttgtggcctgagattactttgatattggtta 36574388  T
Q  101 ctactttcctttgctccacacatc 124  Q
     || ||||||||| ||||||||||    
T  36574387 atattttcctttgatccacacatc 36574364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 40808787 - 40808909
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| | ||| ||||| |||  |||||||| | ||| ||  |||| |||||||||||||||  |  |||||||| ||| ||||    
T  40808787 tatcttttgcttgtggttttgtgttttacacttgggtc-ctagattaaacctaggtc-tgttattattgttgttgcttgagaatactttgatatttgtta 40808884  T
Q  101 ctactttcc-tttgctccacacatc 124  Q
    ||||||||| |||||||||||||||    
T  40808885 ctactttccttttgctccacacatc 40808909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 24790302 - 24790371
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||| ||||||| |||||||||||||||||  |||| ||||||||| |||||  ||||||||||||||    
T  24790302 tggttaccactttccgttgctccacacatcata-ctttgcattggtgtgtttttgtacggaattcacaaca 24790371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 9235785 - 9235843
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||| | ||| | |||||||||||||||| || ||||||||||||    
T  9235785 ttcctttgctccacacatctttgttatttattggtgtgattttgtcc-gaattcacaaca 9235843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 30843367 - 30843303
Alignment:
Q  83 ttactttgaaattggttactactttcc-tttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||  ||||   ||||||||||||||||    
T  30843367 ttactttgatattggttactactttccttttgctccacacttctaagtt---tattggtgtgattttg 30843303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 43504022 - 43503974
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||| ||| ||||||||||||||||||||| ||| ||||||||||||    
T  43504022 tggttaccactctcctttgctccacacatcata-tttcgtattggtgtga 43503974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 4253436 - 4253376
Alignment:
Q  64 ttattgttgttgcttatgtttactttgaaattggttactactttcctttgctccacacatc 124  Q
    ||||||||||||| |  | ||||||||| |||||||| ||||||| |||||| ||||||||    
T  4253436 ttattgttgttgcctgaggttactttgatattggttaatactttcttttgctacacacatc 4253376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 9190223 - 9190294
Alignment:
Q  93 attggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    |||| |||| |||| | ||||||||||||||| | |||||  ||||||||||||||| || ||||||||||||    
T  9190223 attgattaccacttccttttgctccacacatctttgtttttcattggtgtgattttgacc-gaattcacaaca 9190294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 4e-49; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 33160315 - 33160150
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||  |||||||||||||| | |||||||||||||||||||    
T  33160315 tatcttttgtttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttaatattgttgttgcttgtatttactttgaaattggtta 33160216  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattt--tgcccggaattcacaaca 165  Q
    ||| |||||||||||||||||||||||| ||||||||||| ||||||  || |||||||||||||||    
T  33160215 ctattttcctttgctccacacatcatag-tttgtattggtatgattttatgtccggaattcacaaca 33160150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 26954251 - 26954108
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactac 104  Q
    |||| |||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||||| || |||||||||||||||||||||||||||||    
T  26954251 tttttcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgttatttcttatgtttactttgaaattggttactac 26954152  T
Q  105 tttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  26954151 tttcttttgctccacacatcatag-tttgtattggtgtgattttg 26954108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 14521646 - 14521512
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||    
T  14521646 tatcttatgcttgtggttttgagcttttcactttgattcctagattagatctaggtgttgttgttattgttgttgcttgtgtttactttgaaattggtta 14521547  T
Q  101 c----tactttcctttgctccacacatcatagttt 131  Q
    |    |||||| |||||||||||||||||||||||    
T  14521546 ctacgtacttttctttgctccacacatcatagttt 14521512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 28137375 - 28137228
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||| || ||||||||||||| || ||| |||||||||| ||| |||| || | ||| |||||| |||||||||||| ||||||||    
T  28137375 tatcttttgcttgtggttatgtgcttttcactttgattcctatattagatctatgtgttgttattgtcgttattgcttgtgtttactttgatattggtta 28137276  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  28137275 ctactttcctttgctccacacgtcatag-tttgtattggtgtgattttg 28137228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 3038892 - 3038744
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt-atgtttactttgaaattggtt 99  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||| ||| |||| ||||||||||| |||  ||||| |||||| |||||||    
T  3038892 tatcttttgcttgtggttttgaacttttcactttgattactatattagatctaggtgttgttattattgttgttacttgttgtttgctttgatattggtt 3038793  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    | ||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  3038792 attactttcctttgctcgacacatcatag-tttgtattggtctgattttg 3038744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16569223 - 16569372
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| || | || ||||| ||||||  ||| |||||||  |||||||    
T  16569223 tatcttttgcttgtggttttgagcttttcactttgatttctagattagatctaggtgctgctattgttgttattgcttgagttcactttgattttggtta 16569322  T
Q  101 ctactttcc-tttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||| |||||||||||||||||||||   ||||||||||||||||    
T  16569323 ctactttccttttgctccacacatcatagttgaatattggtgtgattttg 16569372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9182996 - 9182857
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||||||||  |||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  9182996 tatcttttgcttgtggttttgtacttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggtt 9182897  T
Q  100 actactttcctttgctccacacatcatagttttgtattggt 140  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  9182896 actactttcctttgctccacacatcatag-tttgtattggt 9182857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 5409034 - 5408887
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||| | ||||||| ||||| || |||||||||||||| ||| |||| || ||| || |||||| || | ||||||| |||||||    
T  5409034 tatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttgtgctcactttgatattggtt 5408936  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  5408935 actactttcctttgctccacacatcatag-tttgtattggtgtgactttg 5408887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 5413359 - 5413212
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||| | ||||||| ||||| || |||||||||||||| ||| |||| || ||| || |||||| || | ||||||| |||||||    
T  5413359 tatcttttgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttgtgctcactttgatattggtt 5413261  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  5413260 actactttcctttgctccacacatcatag-tttgtattggtgtgactttg 5413212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 16452288 - 16452145
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||||||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| | || ||||||  |||||||||||    
T  16452288 ttttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgatgttattgttgattattgcttgtattcactttgttattggttacta 16452190  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||    
T  16452189 ctttcctttactccacacatcatag-ttcgtattggtgtgattttg 16452145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 31404639 - 31404493
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||| | ||||| | ||||| || |||||||||||||| ||| |||| || ||| || |||||| || | ||||||| |||| ||    
T  31404639 tatcttttgcttgtggttt-gtgctttcctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttgatattgatt 31404541  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgatttt 148  Q
    |||| |||||||||||||||||||||||| || ||||||| ||||||||    
T  31404540 actattttcctttgctccacacatcatag-ttcgtattggagtgatttt 31404493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 5406164 - 5406002
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||| ||||||||| | ||||||| ||||| || ||||||||||||||   |||| | |||||| || |||||| || | ||||| | |||||||    
T  5406164 tatcttttgtttgtggttt-gtgcttttctctttgattcctagattagatcta---ggtgctattattgattattgcttgtgctcactttaatattggtt 5406069  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    |||||||| |||| ||||||||||||||| ||||||||||||||| |||  | |||||||||||||||    
T  5406068 actacttttctttactccacacatcatag-tttgtattggtgtgactttaagaccggaattcacaaca 5406002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 5410489 - 5410327
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||| ||||||||| | ||||||| ||||| || ||||||||||||||   |||| | |||||| || |||||| || | ||||| | |||||||    
T  5410489 tatcttttgtttgtggttt-gtgcttttctctttgattcctagattagatcta---ggtgctattattgattattgcttgtgctcactttaatattggtt 5410394  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    |||||||| |||| ||||||||||||||| ||||||||||||||| |||  | |||||||||||||||    
T  5410393 actacttttctttactccacacatcatag-tttgtattggtgtgactttaagaccggaattcacaaca 5410327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 30834496 - 30834351
Alignment:
Q  5 ttttgcttgtggttt-tgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttact 102  Q
    ||||||||||||||| ||   ||||||||||| ||  ||||||||||||| ||| |||| || ||| || ||||||   || ||||||  ||||||||||    
T  30834496 ttttgcttgtggtttgtgtttttttcactttgattcatagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttact 30834397  T
Q  103 actttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    | ||||||||||||||||||||||| ||| |||||||||||||||||    
T  30834396 attttcctttgctccacacatcata-tttcgtattggtgtgattttg 30834351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33211154 - 33211066
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttacttt 89  Q
    ||||||||||||||||||||| | ||||||||||| || |||||||||||||| ||| | || || ||||| |||||| ||||||||||    
T  33211154 tatcttttgcttgtggttttgtgattttcactttgattcctagattagatctaggtgttattattgttgttattgcttgtgtttacttt 33211066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 2171397 - 2171326
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| |||  | |||||||||||||||    
T  2171397 tggttactactttcctttgctccacacatcatag-ttcgtattggtgtgactttgagaccggaattcacaaca 2171326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 3072627 - 3072579
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  3072627 tggttactactttcctttgctccacacatcata-tttcgtattggtgtga 3072579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 412387 - 412456
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||| ||| |   |||||||||||||    
T  412387 tggttactactttcctttgctccacacatcata-cttggtattggtgtggtttcgttaggaattcacaaca 412456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 22963568 - 22963526
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  22963568 ttccttagctccacacatcatag-tttgtattggtgtgattttg 22963526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 23824825 - 23824867
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  23824825 ttccttagctccacacatcatag-tttgtattggtgtgattttg 23824867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 9182862 - 9182828
Alignment:
Q  93 attggttactactttcctttgctccacacatcata 127  Q
    |||||||||||||||||||| ||||||||||||||    
T  9182862 attggttactactttcctttactccacacatcata 9182828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 4e-49; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 39153329 - 39153187
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||| ||  |||| |||||||||||||||||||||    
T  39153329 tatcttgtgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgctgccgcttgtgtttactttgaaattggtta 39153230  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  39153229 ctactttcctttgctccacacatcatag-tttgtattggtgtga 39153187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 29196355 - 29196212
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt-atgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||| |||||||||||||||  ||||| |||||| |||||||    
T  29196355 tatcttttgcttgtggttttgagcttttcactttgattaccagattagatctaggtgttgttattattgttgttgcttgttgtttgctttgatattggtt 29196256  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  29196255 actactttcctttgctccacacatcatag-tttgtattggtgtga 29196212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 44700448 - 44700301
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||| ||||||||    
T  44700448 tatcctttgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattgttgttgcttgtgtttactttgatattggtta 44700349  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||| ||||||||||  |||||||| ||||||||||||||||||||    
T  44700348 ctacttttctttgctccatgcatcatag-tttgtattggtgtgattttg 44700301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 9666435 - 9666287
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgctt-atgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||| |||||||  | ||| |||||| |||||||    
T  9666435 tatcttttgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattgtagttgcttgttatttgctttgatattggtt 9666336  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  9666335 actactttcctttgctccacagatcatag-tttgtattggtgtgattttg 9666287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 22834971 - 22834824
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |||| || ||||| || | | |||||||||||| ||||||||    
T  22834971 tatcttttgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgttattacctgtgtttactttgatattggtta 22834872  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22834871 ctactttcctttgctccacacatcatag-tttgtattggtgtgattttg 22834824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 31314644 - 31314791
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || || ||| |||| ||||||||||||||| |||||||||| | ||| ||||    
T  31314644 tatcttttgcttgtggttttgagcttttcactttgattactagattatatttaggtgttgttattattgttgttgcttgtgtttactttaatattagtta 31314743  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
     ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31314744 ttactttcctttgctccatacatcatag-tttgtattggtgtgattttg 31314791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 761048 - 761193
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| || | || ||||| ||||||  ||| |||||||  |||||||    
T  761048 tatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgctattgttgttattgcttgagttcactttgattttggtta 761147  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattt 147  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  761148 ctactttcctttgctccacacatcatag-tttgtattggtgtgattt 761193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 29811071 - 29811214
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| ||||  ||||||||||||||    
T  29811071 tatcttttgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttctctttgaaattggtt 29811170  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||    
T  29811171 actactttcctttgctccacaaatcata-ttttgtattggtgtga 29811214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 23391878 - 23391735
Alignment:
Q  1 tatcttttgcttgtggttttgagctttt-cactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| | |||| ||||||| ||||||||||||||||| ||| |||| ||||||||||| ||| |||| ||||||| |||||||    
T  23391878 tatcttttgcttgtggttttgtgttttttcactttgattactagattagatctaggtgttgttattattgttgtttcttgtgttcactttgatattggtt 23391779  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    | ||||||||||| ||||||||||||||| |||||||||||||||    
T  23391778 attactttccttttctccacacatcatag-tttgtattggtgtga 23391735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 21350972 - 21350852
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||| ||||||||||| |||||||||||||||| || ||||||||||||||||||   ||||||||||||||| || |||||||||||| ||||||||    
T  21350972 tatcttatgcttgtggttatgagcttttcactttgattcctagattagatctaagtg---ttgttattgttgttgtttgtgtttactttgatattggtta 21350876  T
Q  101 ctactttcctttgctccacacatc 124  Q
    ||||||||||||||| ||||||||    
T  21350875 ctactttcctttgcttcacacatc 21350852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 40735585 - 40735733
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||| |||| |||||||||||||||| ||| |||||||||| ||| |||| || ||| || ||| || |||| ||||||| |||||||    
T  40735585 tatcttttgcttgtggatttgtgcttttcactttggttcctatattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggtt 40735684  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  40735685 actactttcctttgctccacacatcata-atttgtattggtgtgattttg 40735733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 19683853 - 19683687
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| | ||||||||||  || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  19683853 tatcttttgcttgtggttttgtgtttttcacttttattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggtt 19683754  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||  | |||||||||||||||    
T  19683753 actactttcctttgctccaaacatcatag-tttgtattggtgtgagtttgagaccggaattcacaaca 19683687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 7762469 - 7762610
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| ||||||||||||| || ||| |||||||||| ||| |||| || ||| || || ||| |||| ||||||| |||||||    
T  7762469 tatcttttgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattacttgtgttcactttgatattggtt 7762568  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgt 142  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  7762569 actactttcctttgctccacacatcatag-tttgtattggtgt 7762610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 9636067 - 9635923
Alignment:
Q  23 gcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttactactttcctttgctccacac 121  Q
    ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  9636067 gcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccacac 9635968  T
Q  122 atcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    ||||||| |||||||||||||||||||  | |||||||||||||||    
T  9635967 atcatag-tttgtattggtgtgattttgagaccggaattcacaaca 9635923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 40734700 - 40734848
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||| |||| ||||| ||||||| || |||||||||||||| ||| |||| || ||  || || ||| |||| ||||||| |||||||    
T  40734700 tatcttttgcttgtggatttgtgctttgcactttgattcctagattagatctaggtgctgttattttttattatttcttgtgttcactttgatattggtt 40734799  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40734800 actactttcctttgctccacacatcatag-tttgtattggtgtgattttg 40734848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 7764668 - 7764838
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||| ||||||||||| ||||||||||||| || | |||||||||||| ||| |||| || ||| || |||||| |||| ||||||| |||||||    
T  7764668 tatcttttgtttgtggttttgtgcttttcactttgattccaagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggtt 7764767  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaacatgga 169  Q
    ||||||||||||| || |||||||||||| |||||||||||||  ||||  | |||||||||||||||||||    
T  7764768 actactttcctttacttcacacatcatag-tttgtattggtgtagttttgagtccggaattcacaacatgga 7764838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 29682560 - 29682706
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||| ||||||||||| || |||| ||||||||| ||| || | || ||||| |||||| | || ||||| |  ||| |||    
T  29682560 tatcttttgcttgtggttttgagtttttcactttgattcctaggttagatctaggtgctgctattgttgttattgcttgtattcactttaattttgatta 29682659  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgatttt 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  29682660 ctactttcctttgctccacacatcatag-tttgtattggtgtgatttt 29682706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 9581493 - 9581652
Alignment:
Q  8 tgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttactactt 106  Q
    |||||||||||||| ||||||||||||| ||  ||||||||||||| ||| |||| || ||| || |||||| || | ||||||| ||||||||||||||    
T  9581493 tgcttgtggttttgtgcttttcactttgattcatagattagatctaggtgctgttattgttgattattgcttgtgctcactttgatattggttactactt 9581592  T
Q  107 tcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    ||||||||| |||||||||||| ||| |||||||||||||||  | |||||||||||||||    
T  9581593 tcctttgcttcacacatcatag-tttatattggtgtgattttgagtccggaattcacaaca 9581652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 29813264 - 29813407
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||| ||||||||||||||||||||||||| ||  ||||||||||||| ||| |||| || ||| || ||| || |||| ||||||| ||| |||    
T  29813264 tatcttttggttgtggttttgagcttttcactttgattcttagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattagtt 29813363  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||| |||||||||||||||||||| |||||||||||||||    
T  29813364 actacttttctttgctccacacatcatag-tttgtattggtgtga 29813407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 9634764 - 9634621
Alignment:
Q  23 gcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttactactttcctttgctccacac 121  Q
    ||||||||||||| || |||||||||||||| ||| |||| || ||| || |||||| |||| ||||||| ||||||||||||||||||||||||||||     
T  9634764 gcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctttgctccaca- 9634666  T
Q  122 atcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    ||||||| |||||||||||||||||||  | |||||||||||||||    
T  9634665 atcatag-tttgtattggtgtgattttgagaccggaattcacaaca 9634621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 23410298 - 23410154
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttc--actttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggt 98  Q
    ||||||||||||||||||||||| ||||   |||||| ||||||||||||||||| ||| ||||  |||| ||||||||| |||| ||||||| ||  ||    
T  23410298 tatcttttgcttgtggttttgagttttttttactttgattactagattagatctaggtgttgttaatatttttgttgcttgtgttcactttgatatatgt 23410199  T
Q  99 tactactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||    
T  23410198 tactactttcctttgatccacacatcatag-tttgtattgatgtga 23410154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 32891303 - 32891424
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||||| ||||||||||| || ||| |||||||||| |||         |||||||||||| |||||||||| | ||||||||    
T  32891303 tatcttttgcttgtggttttgagtttttcactttgattcctatattagatctaggtg---------ttgttgttgcttgtgtttactttaatattggtta 32891393  T
Q  101 ctactttcctttgctccacacatcatagttt 131  Q
    |||||||||||||||||||||||||||||||    
T  32891394 ctactttcctttgctccacacatcatagttt 32891424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 27305679 - 27305536
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||| ||||||||||| | ||||||||||  |  |||||||||||||| || | ||| || |||||||||||| |  ||||||||| ||||||||    
T  27305679 tatcttttgtttgtggttttgtgtttttcactttactc-ctagattagatctaggttg-gttattgttgttgttgcttgttgttactttgatattggtta 27305582  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||    
T  27305581 ctactttcctttgctccacacatcatagtt---tattggtgtgattttg 27305536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 5236422 - 5236274
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||| |||| ||||||||||||| || |||||||||||||| | | | || || ||| || |||||| |||| ||||||| || | ||    
T  5236422 tatcttttgcttgtggatttgtgcttttcactttgattcctagattagatctaggagctcttattgttgattattgcttgtgttcactttgatatcgatt 5236323  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  5236322 actactttcctgtactccacacatcatag-tttgtattggtgtgattttg 5236274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 37408662 - 37408810
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||| ||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||| || || | ||||| | |||||||    
T  37408662 tatcttttgcttgtgatttagtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgctcactttaatattggtt 37408761  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  37408762 actactttcctttgctccacacatcata-ttttgtattgatgtgactttg 37408810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 51399017 - 51399165
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||||||||||||||||  |||||||||||| || |||||||||||||| ||| |||| || ||| || |||||  || | ||||||| |||| ||    
T  51399017 tatcttttgcttgtggttttgtacttttcactttgattcctagattagatctaggtgctgttattgttgattattgctagtgctcactttgatattgttt 51399116  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
     |||||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  51399117 tctactttcctttgctccatacatcatag-tttgtattggtatgattttg 51399165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 5258104 - 5257943
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||||||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||   || ||||||  |||||||||||    
T  5258104 ttttgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttacta 5258006  T
Q  104 ctttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    ||||||||||||||||||||||||| || |||||||||||| |||  | |||||||||||||||    
T  5258005 ctttcctttgctccacacatcatag-ttcgtattggtgtgactttgagaccggaattcacaaca 5257943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 2075044 - 2074900
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    ||||||||||||||||||||| | ||||||||| | || |||||||| ||||  ||  | || || || ||||||||| || ||| ||||| ||||||||    
T  2075044 tatcttttgcttgtggttttgtgtttttcactt-gtttcctagattaaatctgggtt-tattattgttattgttgcttgtggttattttgatattggtta 2074947  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  2074946 ctactttcctttgctccacacatcatagttt--tattggtgtgattttg 2074900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16499228 - 16499365
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||||  ||||||| |||| || ||||||||||| ||   |||||||||||||      ||| ||||||||||||  |||||||    
T  16499228 tatcttttgcttgtggttttgtacttttca-tttgattcctagattagattta---ggtgttgttattg------cttgtgtttactttgatgttggtta 16499317  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  16499318 ctactttcctttgctccacacattatag-tttgtattgatgtgattttg 16499365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 45095367 - 45095514
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||| | | ||| | ||||| ||  ||||||||||||| ||| |||| || ||| || |||||| || | ||||||| |||||||    
T  45095367 tatcttttgcttgtggttt-gtgttttactctttgattcatagattagatctatgtgctgttattgttgattattgcttgtgctcactttgatattggtt 45095465  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  45095466 actactttcctttgctctacacatcatag-tttgtattgatgtgattttg 45095514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 51352102 - 51351958
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||| |||||||||||| | |||||| |||| || |||||||||||||| ||  |||| || ||| || ||||| || ||||||||| ||||||||    
T  51352102 tatcttttacttgtggttttgtgtttttca-tttgattcctagattagatctaggtt-tgttattgttgctgctgcttgtgattactttgatattggtta 51352005  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    | |||||||||||||||||||||| |||| |  ||||| ||||||||||    
T  51352004 ccactttcctttgctccacacatcgtagtat--tattgatgtgattttg 51351958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 5260283 - 5260158
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttacta 103  Q
    ||||||||||||||| | ||||||||||||| || ||| |||||||||| ||| |||| || ||| || ||||||    | ||||||  |||||||||||    
T  5260283 ttttgcttgtggttt-gtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttgcactcactttgttattggttacta 5260185  T
Q  104 ctttcctttgctccacacatcatagtt 130  Q
    |||||||||||||||||||||||||||    
T  5260184 ctttcctttgctccacacatcatagtt 5260158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 23197816 - 23197745
Alignment:
Q  93 attggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||  ||||||||||||||    
T  23197816 attggttactactttcctttgctccacatatcata-ctttgtattggtgtggttttgtacggaattcacaaca 23197745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 23200009 - 23199938
Alignment:
Q  93 attggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||  ||||||||||||||    
T  23200009 attggttactactttcctttgctccacatatcata-ctttgtattggtgtggttttgtacggaattcacaaca 23199938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 37406985 - 37407040
Alignment:
Q  93 attggttactactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  37406985 attggttactactttcctttgctccacacatcata-ttttgtagtggtgtgactttg 37407040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 32744388 - 32744291
Alignment:
Q  25 ttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggttactactttcctttgctccacacatc 124  Q
    ||||||||||| || |||||||||||||| ||| |||| | |||||||||||||         |||||||||||||||||||||  |||||||| |||||    
T  32744388 ttttcactttgatttctagattagatctaggtgttgttatcattgttgttgctt---------ttgaaattggttactactttctattgctccatacatc 32744298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 801388 - 801436
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  801388 tggttactactttcctttgctccacacatcata-tttcgtattggtgtga 801436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 53921468 - 53921422
Alignment:
Q  5 ttttgcttgtggttttgagcttttcactttggttactagattagatc 51  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  53921468 ttttgtttgtggttttgagcttttcactttgattcctagattagatc 53921422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 1417707 - 1417766
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||| | |||||  ||||||||||||||| ||  |||||||||||    
T  1417707 ttcctttgctccacacatctttgtttttcattggtgtgattttgtccaaaattcacaaca 1417766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 6794930 - 6794988
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||| | |||||  ||||||||||||||| || ||||||||||||    
T  6794930 ttcctttgctccacacatcgttgtttttcattggtgtgattttgtcc-gaattcacaaca 6794988  T

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Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 30710009 - 30710068
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||| | ||| |  ||||||||||||||  |||||||||||||||    
T  30710009 ttcctttgctccacacatctttgttattcattggtgtgatttttaccggaattcacaaca 30710068  T

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Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 7779871 - 7779802
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||| ||| |||||||||||||||||| ||  || ||||||||||| |||||  ||||||||||||||    
T  7779871 tggttaccactctcctttgctccacacatctta-cttcgtattggtgtggttttgtacggaattcacaaca 7779802  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 37466161 - 37466101
Alignment:
Q  105 tttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaacat 166  Q
    ||||||||||||| |||||| | ||| | |||||||||||||||| || |||||||||||||    
T  37466161 tttcctttgctcctcacatctttgttatttattggtgtgattttgtcc-gaattcacaacat 37466101  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 54635427 - 54635476
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    ||||||| ||| ||||||||||||||||||||  ||| ||||||||||||    
T  54635427 tggttaccactctcctttgctccacacatcattatttagtattggtgtga 54635476  T

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Target: scaffold0016 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 114806 - 114971
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||||| ||||| |||||| ||||||||||||| || ||||||||||| || ||| |||| || ||| || ||| || |||| ||||||| |||||||    
T  114806 tatctttttcttgttgttttgtgcttttcactttgattcctagattagatataggtgttgttattgttgattattgattgtgttcactttgatattggtt 114905  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  114906 attactttcctttgctccacacatcatagttttgtattggtgtgattttgtccggaattcacaaca 114971  T

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Target: scaffold0066 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 20380 - 20241
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    ||||||||||||||||||||| | ||||||||||| || |||||||||||||| ||| |||| || ||  || |||||| |||| ||||||| |||||||    
T  20380 tatcttttgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttaattattgcttgtgttcactttgacattggtt 20281  T
Q  100 actactttcctttgctccacacatcatagttttgtattggt 140  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  20280 actaccttcctttgctccacacatcatag-tttgtattggt 20241  T

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Target: scaffold1668 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 1467 - 1324
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgttta-ctttgaaattggtt 99  Q
    ||||||||||||||||||||  | ||||||||||  || |||||||||||||| ||| |||| |  ||||| || ||| |||||| |||| | |||| ||    
T  1467 tatcttttgcttgtggttttatgtttttcactttaattcctagattagatctaggtgctgttatcgttgttattacttgtgtttaactttaatattgatt 1368  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtga 144  Q
    |||||||||||||||||||||||||||||  ||||||||||||||    
T  1367 actactttcctttgctccacacatcatag-attgtattggtgtga 1324  T

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Target: scaffold0006 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 149066 - 148929
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattgttgttgcttatgtttactttgaaattggtta 100  Q
    |||||||||||||||||||||  ||||||| |||| || ||||||||||| ||   |||||||||||||      ||| ||||||||||||  |||||||    
T  149066 tatcttttgcttgtggttttgtacttttca-tttgattcctagattagattta---ggtgttgttattg------cttgtgtttactttgatgttggtta 148977  T
Q  101 ctactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  148976 ctactttcctttgctccacacattatag-tttgtattgatgtgattttg 148929  T

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Target: scaffold1519 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 1125 - 1285
Alignment:
Q  6 tttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggttactac 104  Q
    |||||||||||||| | ||||||||||||| |  |||||||||||||| |||||||| || ||| || ||||||   || || |||  ||||||||||||    
T  1125 tttgcttgtggttt-gtgcttttcactttgatacctagattagatctaggtggtgttattgttgattattgcttgcattcacattgtcattggttactac 1223  T
Q  105 tttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    | ||||||| |||||||||||||| || |||||||||||| |||  | |||||||||||||||    
T  1224 tatcctttgttccacacatcatag-ttcgtattggtgtgactttgagaccggaattcacaaca 1285  T

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Target: scaffold0491 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 11123 - 10960
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||||||| | | ||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||      |||| |  |||||||    
T  11123 tatcttgtgcttgtggttt-gtgtttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccacttagtcattggtt 11025  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||||| ||||||  |||||||||||||| |||||  ||||||||||||||    
T  11024 actactttcctttgctccacatatcata-ctttgtattggtgtggttttgtacggaattcacaaca 10960  T

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Target: scaffold0491; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 8697 - 8534
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||||||| | ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||||||      |||| |  |||||||    
T  8697 tatcttgtgcttgtggttt-gtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccacttagtcattggtt 8599  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||||  ||||||  |||||||||||||| |||||  | ||||||||||||    
T  8598 actactttcctttgctccacgtatcata-ctttgtattggtgtggttttgtacagaattcacaaca 8534  T

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Target: scaffold0286 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 11864 - 11935
Alignment:
Q  95 tggttactactttcctttgctccacacatcatagttttgtattggtgtgatttt--gcccggaattcacaaca 165  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| |||  | |||||||||||||||    
T  11864 tggttactactttcctttgctccacacatcatag-ttcgtattggtgtgactttgagaccggaattcacaaca 11935  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 434738 - 434885
Alignment:
Q  1 tatcttttgcttgtggttttgagcttttcactttggttactagattagatctaagtggtgttgttattg-ttgttgcttatgtttactttgaaattggtt 99  Q
    |||||| |||||||| ||||| ||||||||||||| || |||||||||||||| ||| |||| || ||| || ||| ||      ||||| | | |||||    
T  434738 tatcttgtgcttgtg-ttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgattgaaaacactttaataatggtt 434836  T
Q  100 actactttcctttgctccacacatcatagttttgtattggtgtgattttg 149  Q
    ||||||||||||||||||||||||||||| || |||||||||||| ||||    
T  434837 actactttcctttgctccacacatcatag-ttcgtattggtgtgactttg 434885  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 85554 - 85494
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaacat 166  Q
    ||||||||||| ||||||| | |||||  ||||||||||||||  ||||||||||||||||    
T  85554 ttcctttgctctacacatctttgtttttcattggtgtgatttttaccggaattcacaacat 85494  T

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Target: scaffold0087 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 37060 - 37119
Alignment:
Q  106 ttcctttgctccacacatcatagttttgtattggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||| | |||||  || |||||||||||  |||||||||||||||    
T  37060 ttcctttgctccacacatctttgtttttcatcggtgtgattttcaccggaattcacaaca 37119  T

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Target: scaffold1805 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1805
Description:

Target: scaffold1805; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 1277 - 1217
Alignment:
Q  106 ttcctttgctccacacatcatagttttgt-attggtgtgattttgcccggaattcacaaca 165  Q
    ||||||||||||||||||| | ||||| | ||||||||||||||  || ||||||||||||    
T  1277 ttcctttgctccacacatctttgttttttcattggtgtgatttttaccagaattcacaaca 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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