View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9770_low_10 (Length: 250)

Name: NF9770_low_10
Description: NF9770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9770_low_10
NF9770_low_10
[»] chr8 (25 HSPs)
chr8 (1-247)||(22907361-22907607)
chr8 (15-146)||(17345540-17345671)
chr8 (175-247)||(43685584-43685656)
chr8 (27-142)||(24548956-24549071)
chr8 (175-247)||(5238125-5238197)
chr8 (25-149)||(16405144-16405268)
chr8 (175-247)||(24661401-24661473)
chr8 (27-149)||(43373642-43373761)
chr8 (27-142)||(6774420-6774535)
chr8 (27-142)||(16193890-16194005)
chr8 (72-149)||(222899-222975)
chr8 (72-149)||(736522-736598)
chr8 (72-149)||(860417-860493)
chr8 (7-250)||(24928945-24929179)
chr8 (72-149)||(30120690-30120766)
chr8 (5-159)||(23837154-23837308)
chr8 (72-149)||(21844780-21844856)
chr8 (72-149)||(21852173-21852249)
chr8 (179-236)||(22321597-22321654)
chr8 (76-157)||(13662481-13662561)
chr8 (96-145)||(16674624-16674672)
chr8 (123-160)||(41246613-41246650)
chr8 (156-236)||(23217924-23218004)
chr8 (175-250)||(41507116-41507191)
chr8 (175-233)||(22981241-22981299)
[»] chr7 (22 HSPs)
chr7 (1-247)||(7292886-7293132)
chr7 (18-161)||(13037179-13037322)
chr7 (18-149)||(11580904-11581035)
chr7 (27-149)||(36052634-36052756)
chr7 (7-142)||(47481185-47481320)
chr7 (27-146)||(16479124-16479244)
chr7 (13-142)||(13320988-13321117)
chr7 (175-247)||(11516265-11516337)
chr7 (175-247)||(15441717-15441789)
chr7 (175-247)||(30262282-30262354)
chr7 (27-149)||(16211733-16211855)
chr7 (27-149)||(18254009-18254130)
chr7 (18-149)||(3059933-3060064)
chr7 (96-149)||(2437425-2437477)
chr7 (72-149)||(10989378-10989454)
chr7 (14-146)||(296128-296257)
chr7 (87-149)||(13572644-13572705)
chr7 (156-236)||(13351999-13352079)
chr7 (87-131)||(13911248-13911292)
chr7 (128-160)||(15822691-15822723)
chr7 (87-149)||(25292572-25292633)
chr7 (5-160)||(17224075-17224230)
[»] chr4 (21 HSPs)
chr4 (1-247)||(26680070-26680316)
chr4 (7-145)||(15675243-15675381)
chr4 (7-142)||(31115603-31115738)
chr4 (18-160)||(13246386-13246528)
chr4 (25-160)||(54118416-54118551)
chr4 (62-145)||(10104440-10104523)
chr4 (18-149)||(111362-111493)
chr4 (175-247)||(10488600-10488672)
chr4 (175-230)||(16328079-16328134)
chr4 (7-149)||(10644187-10644328)
chr4 (71-146)||(7849970-7850044)
chr4 (72-149)||(47357622-47357698)
chr4 (5-99)||(41166083-41166177)
chr4 (5-149)||(15044794-15044938)
chr4 (175-236)||(19559410-19559471)
chr4 (128-160)||(44055870-44055902)
chr4 (5-120)||(8374504-8374619)
chr4 (7-52)||(10104404-10104449)
chr4 (5-149)||(15109486-15109630)
chr4 (5-69)||(13809647-13809711)
chr4 (5-116)||(52265645-52265757)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-247)||(37213-37459)
[»] chr3 (28 HSPs)
chr3 (1-247)||(16744262-16744508)
chr3 (7-160)||(15859178-15859331)
chr3 (5-143)||(17912633-17912771)
chr3 (75-236)||(15468555-15468717)
chr3 (27-149)||(2049777-2049899)
chr3 (75-236)||(22275088-22275250)
chr3 (27-149)||(12030321-12030443)
chr3 (27-142)||(15614808-15614923)
chr3 (7-250)||(13838769-13839003)
chr3 (27-149)||(14842735-14842856)
chr3 (7-142)||(47984624-47984759)
chr3 (7-142)||(48003198-48003333)
chr3 (27-149)||(15936801-15936922)
chr3 (27-149)||(15938643-15938764)
chr3 (7-142)||(47993911-47994046)
chr3 (7-142)||(48012484-48012619)
chr3 (175-247)||(2449391-2449463)
chr3 (18-160)||(51158183-51158325)
chr3 (97-149)||(19231945-19231997)
chr3 (87-149)||(41270043-41270104)
chr3 (87-149)||(55316187-55316248)
chr3 (156-236)||(18969968-18970048)
chr3 (87-149)||(13955124-13955185)
chr3 (87-149)||(13975956-13976017)
chr3 (87-149)||(45860773-45860834)
chr3 (128-160)||(22144532-22144564)
chr3 (175-236)||(48421624-48421685)
chr3 (5-117)||(12264938-12265050)
[»] chr5 (24 HSPs)
chr5 (7-145)||(22053987-22054125)
chr5 (7-141)||(18531221-18531355)
chr5 (18-160)||(27182712-27182854)
chr5 (15-146)||(34939248-34939379)
chr5 (27-149)||(23506932-23507054)
chr5 (75-236)||(17471803-17471956)
chr5 (175-247)||(20623007-20623079)
chr5 (175-247)||(21233681-21233753)
chr5 (175-247)||(25900558-25900630)
chr5 (175-247)||(37052782-37052854)
chr5 (72-149)||(12342-12418)
chr5 (72-149)||(18778200-18778276)
chr5 (72-149)||(21073803-21073879)
chr5 (72-149)||(22366689-22366765)
chr5 (72-149)||(25426596-25426672)
chr5 (69-142)||(29190479-29190552)
chr5 (175-247)||(16536235-16536307)
chr5 (90-149)||(19499867-19499925)
chr5 (72-149)||(43443603-43443679)
chr5 (87-149)||(27009809-27009870)
chr5 (5-130)||(4200126-4200251)
chr5 (5-117)||(23493916-23494029)
chr5 (175-250)||(2031683-2031758)
chr5 (5-69)||(7728466-7728530)
[»] scaffold0622 (1 HSPs)
scaffold0622 (18-160)||(9338-9480)
[»] scaffold0195 (2 HSPs)
scaffold0195 (7-149)||(19173-19315)
scaffold0195 (7-149)||(21257-21399)
[»] chr2 (21 HSPs)
chr2 (7-149)||(36982595-36982737)
chr2 (7-160)||(19794858-19795011)
chr2 (7-145)||(24341543-24341681)
chr2 (18-149)||(8891209-8891340)
chr2 (38-142)||(25265575-25265679)
chr2 (39-146)||(7508030-7508138)
chr2 (19-149)||(43643123-43643250)
chr2 (175-247)||(14906593-14906665)
chr2 (175-247)||(20015049-20015121)
chr2 (175-247)||(23820109-23820181)
chr2 (18-149)||(462706-462836)
chr2 (72-149)||(19886869-19886945)
chr2 (175-221)||(19689554-19689600)
chr2 (29-149)||(20627489-20627609)
chr2 (87-149)||(17396887-17396948)
chr2 (38-120)||(19669279-19669362)
chr2 (175-250)||(25601897-25601972)
chr2 (39-99)||(9636761-9636821)
chr2 (38-117)||(19666525-19666605)
chr2 (39-83)||(24884718-24884762)
chr2 (128-160)||(32465813-32465845)
[»] scaffold0025 (2 HSPs)
scaffold0025 (7-145)||(8820-8958)
scaffold0025 (27-149)||(148688-148810)
[»] chr6 (22 HSPs)
chr6 (18-160)||(23153403-23153545)
chr6 (15-146)||(1657909-1658040)
chr6 (38-149)||(35009624-35009735)
chr6 (13-146)||(27740808-27740941)
chr6 (27-142)||(14626292-14626407)
chr6 (15-146)||(15862443-15862573)
chr6 (27-142)||(1650267-1650382)
chr6 (72-149)||(25175531-25175607)
chr6 (6-160)||(18381821-18381975)
chr6 (96-149)||(16825986-16826038)
chr6 (72-149)||(27654191-27654267)
chr6 (175-236)||(15889853-15889914)
chr6 (156-236)||(22585674-22585754)
chr6 (156-236)||(22590505-22590585)
chr6 (29-135)||(22361926-22362032)
chr6 (175-233)||(25640702-25640760)
chr6 (131-160)||(32898745-32898774)
chr6 (156-236)||(15005034-15005114)
chr6 (5-160)||(21623123-21623278)
chr6 (5-69)||(25367374-25367438)
chr6 (38-117)||(33324690-33324770)
chr6 (38-117)||(35136182-35136262)
[»] chr1 (17 HSPs)
chr1 (7-149)||(20445646-20445788)
chr1 (7-149)||(20531411-20531553)
chr1 (25-160)||(20893798-20893933)
chr1 (27-149)||(20913004-20913126)
chr1 (27-146)||(41394191-41394311)
chr1 (27-142)||(2116228-2116343)
chr1 (27-149)||(20931312-20931434)
chr1 (18-149)||(37844616-37844746)
chr1 (27-149)||(22227777-22227898)
chr1 (27-149)||(22232474-22232595)
chr1 (175-247)||(51452530-51452602)
chr1 (62-142)||(45051416-45051496)
chr1 (87-149)||(5072611-5072672)
chr1 (87-149)||(18601341-18601402)
chr1 (128-159)||(49967607-49967638)
chr1 (39-120)||(20254308-20254389)
chr1 (38-117)||(22143531-22143611)
[»] scaffold0023 (2 HSPs)
scaffold0023 (18-149)||(48565-48696)
scaffold0023 (72-145)||(36065-36137)
[»] scaffold0077 (1 HSPs)
scaffold0077 (7-149)||(37067-37209)
[»] scaffold0008 (3 HSPs)
scaffold0008 (17-149)||(128332-128464)
scaffold0008 (72-130)||(31884-31942)
scaffold0008 (128-156)||(22650-22678)
[»] scaffold0011 (3 HSPs)
scaffold0011 (25-149)||(123336-123460)
scaffold0011 (128-160)||(255074-255106)
scaffold0011 (128-160)||(261680-261712)
[»] scaffold0106 (1 HSPs)
scaffold0106 (18-160)||(41686-41827)
[»] scaffold0026 (2 HSPs)
scaffold0026 (27-149)||(107715-107836)
scaffold0026 (87-149)||(64751-64812)
[»] scaffold0125 (1 HSPs)
scaffold0125 (38-142)||(41622-41726)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-149)||(247607-247738)
[»] scaffold1542 (1 HSPs)
scaffold1542 (25-147)||(706-828)
[»] scaffold0498 (1 HSPs)
scaffold0498 (27-149)||(8846-8967)
[»] scaffold0266 (2 HSPs)
scaffold0266 (27-149)||(1091-1213)
scaffold0266 (27-149)||(3756-3877)
[»] scaffold0049 (1 HSPs)
scaffold0049 (27-149)||(48155-48276)
[»] scaffold0075 (2 HSPs)
scaffold0075 (7-146)||(34614-34755)
scaffold0075 (177-250)||(4817-4890)
[»] scaffold0215 (2 HSPs)
scaffold0215 (27-142)||(9511-9626)
scaffold0215 (27-142)||(16409-16524)
[»] scaffold0218 (1 HSPs)
scaffold0218 (20-149)||(5228-5356)
[»] scaffold0413 (1 HSPs)
scaffold0413 (17-149)||(6227-6358)
[»] scaffold0175 (1 HSPs)
scaffold0175 (29-149)||(1131-1250)
[»] scaffold0162 (2 HSPs)
scaffold0162 (38-142)||(8362-8466)
scaffold0162 (20-149)||(26582-26710)
[»] scaffold0104 (1 HSPs)
scaffold0104 (27-149)||(48482-48603)
[»] scaffold0022 (1 HSPs)
scaffold0022 (27-149)||(5378-5498)
[»] scaffold0529 (1 HSPs)
scaffold0529 (7-142)||(2936-3072)
[»] scaffold0302 (1 HSPs)
scaffold0302 (17-149)||(12083-12214)
[»] scaffold0141 (2 HSPs)
scaffold0141 (175-247)||(22578-22650)
scaffold0141 (175-247)||(26833-26905)
[»] scaffold0132 (1 HSPs)
scaffold0132 (38-142)||(13480-13584)
[»] scaffold0124 (1 HSPs)
scaffold0124 (175-247)||(1735-1807)
[»] scaffold1560 (1 HSPs)
scaffold1560 (27-149)||(26-147)
[»] scaffold0369 (1 HSPs)
scaffold0369 (27-149)||(3690-3811)
[»] scaffold0009 (1 HSPs)
scaffold0009 (7-250)||(271900-272134)
[»] scaffold0001 (3 HSPs)
scaffold0001 (7-250)||(171780-172014)
scaffold0001 (7-250)||(177483-177717)
scaffold0001 (128-160)||(70882-70914)
[»] scaffold0139 (2 HSPs)
scaffold0139 (96-149)||(14292-14344)
scaffold0139 (28-149)||(21279-21399)
[»] scaffold0361 (1 HSPs)
scaffold0361 (62-141)||(3183-3262)
[»] scaffold1404 (1 HSPs)
scaffold1404 (96-149)||(1815-1867)
[»] scaffold0076 (1 HSPs)
scaffold0076 (72-149)||(42965-43041)
[»] scaffold0066 (1 HSPs)
scaffold0066 (5-117)||(54415-54527)
[»] scaffold0053 (1 HSPs)
scaffold0053 (5-160)||(76984-77139)
[»] scaffold0483 (1 HSPs)
scaffold0483 (175-236)||(1028-1089)
[»] scaffold0109 (1 HSPs)
scaffold0109 (175-236)||(45815-45876)
[»] scaffold0021 (1 HSPs)
scaffold0021 (123-160)||(132505-132542)
[»] scaffold0006 (1 HSPs)
scaffold0006 (5-140)||(197390-197525)
[»] scaffold1734 (1 HSPs)
scaffold1734 (175-250)||(1272-1347)
[»] scaffold0396 (1 HSPs)
scaffold0396 (175-250)||(12007-12082)
[»] scaffold0122 (1 HSPs)
scaffold0122 (175-250)||(24496-24571)
[»] scaffold0032 (1 HSPs)
scaffold0032 (39-117)||(104793-104872)
[»] scaffold0389 (1 HSPs)
scaffold0389 (38-135)||(10642-10739)
[»] scaffold0116 (1 HSPs)
scaffold0116 (87-149)||(3-64)
[»] scaffold0970 (1 HSPs)
scaffold0970 (38-99)||(2471-2532)
[»] scaffold0240 (1 HSPs)
scaffold0240 (131-160)||(7522-7551)
[»] scaffold0160 (1 HSPs)
scaffold0160 (175-236)||(3406-3467)
[»] scaffold0044 (1 HSPs)
scaffold0044 (131-160)||(38253-38282)
[»] scaffold0700 (1 HSPs)
scaffold0700 (28-92)||(2548-2612)
[»] scaffold0507 (1 HSPs)
scaffold0507 (156-232)||(1629-1705)
[»] scaffold0123 (1 HSPs)
scaffold0123 (38-117)||(8007-8087)
[»] scaffold0016 (1 HSPs)
scaffold0016 (42-161)||(116687-116806)


Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 22907361 - 22907607
Alignment:
Q  1 tgacatgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  22907361 tgacatgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcattgcttgggtatacatat 22907460  T
Q  101 tcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataagttgttgttgaattatgatggagtgt 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22907461 tcatggattgatgatgagaatttgaattgttgttggtgttttggtgaaatttgtgaattgatgaaatatgataagttgttgttgaattatgatggagtgt 22907560  T
Q  201 atgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||    
T  22907561 atgattatatgttatgattgtggttgattgttgatgttgatctcatt 22907607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 17345671 - 17345540
Alignment:
Q  15 tgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatga 114  Q
    ||||||||| |||||||||||| || ||||| || ||| || |||| |||||||| ||||||||||||  | |||||||| |||||||||| || | |||    
T  17345671 tgaattgagttatgattcttgttcagttgatattattgttgttaattgatgttgttgttgatgaatcactgcttgggtatgcatattcatgaataggtga 17345572  T
Q  115 tgaaaatttgaattgttgttggtgttttggtg 146  Q
    ||||||||||||||||||||||||||||||||    
T  17345571 tgaaaatttgaattgttgttggtgttttggtg 17345540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 43685656 - 43685584
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  43685656 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgttgatctcatt 43685584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 24549071 - 24548956
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||  ||||||||||| | | || |||| |||||||||||||||||||||| | |||||||| |||||||||| |||||| |||| ||||||||    
T  24549071 tgattcttgctcaattgatgttatggttgttaattgatgttgtagttgatgaatcattgcttgggtatgcatattcatgaattgattatgagaatttgaa 24548972  T
Q  127 ttgttgttggtgtttt 142  Q
    ||||||||||||||||    
T  24548971 ttgttgttggtgtttt 24548956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 5238197 - 5238125
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  5238197 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 5238125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 16405144 - 16405268
Alignment:
Q  25 tatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttg 124  Q
    |||||||||||| ||||||||||| ||| || |||| |||||| ||||||||||||||  | |||||||| || ||||||| ||||||||||| ||||||    
T  16405144 tatgattcttgttcaattgatgttattgttgttaattgatgttttagttgatgaatcactgcttgggtatgcaaattcatgaattgatgatgataatttg 16405243  T
Q  125 aattgttgttggtgttttggtgaaa 149  Q
    |  |||||||||||||||| |||||    
T  16405244 agatgttgttggtgttttgatgaaa 16405268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 24661401 - 24661473
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  24661401 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 24661473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 43373642 - 43373761
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||| | | | || |||| |||||||| |||||||||| || | |||||||| |||||||||| ||||||||||| ||||||||    
T  43373642 tgattcttgttcaattgatgctatggttgttaattgatgttgtggttgatgaataattgcttgggtatgcatattcatgaattgatgatgagaatttgaa 43373741  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
       ||||||||||||||||||||    
T  43373742 ---ttgttggtgttttggtgaaa 43373761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 6774420 - 6774535
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||  ||||||||||| ||| || || | |||||||| ||||||||||||  | |||||||| |||||||||| |||||| |||| |||||||     
T  6774420 tgattcttgctcaattgatgttattgttgttatttgatgttgttgttgatgaatcactgcttgggtatgcatattcatgaattgattatgagaatttgat 6774519  T
Q  127 ttgttgttggtgtttt 142  Q
    ||||||||||||||||    
T  6774520 ttgttgttggtgtttt 6774535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 16193890 - 16194005
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | |||||||| |||||||||| ||||| ||||  |||||||     
T  16193890 tgattcttgttcaattgatgttatggttgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgaggatgttaatttgag 16193989  T
Q  127 ttgttgttggtgtttt 142  Q
     |||||||||||||||    
T  16193990 atgttgttggtgtttt 16194005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 222899 - 222975
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  222899 ttgatgaataattgcttgggtatgcatattcatggattgatgatgagaatttgagttg-tgttggtgttttggtgaaa 222975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 736522 - 736598
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  736522 ttgatgaataattgcttgggtatgcatattcatggattgatgatgagaatttgagttg-tgttggtgttttggtgaaa 736598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 860417 - 860493
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  860417 ttgatgaataattgcttgggtatgcatattcatggattgatgatgagaatttgagttg-tgttggtgttttggtgaaa 860493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 24928945 - 24929179
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| |||| |||||| ||||  |||||| ||||||| ||| | | || |||| ||||||||  |||||||||||| | |||||||| ||||||||||     
T  24928945 gttgtggttggattgagttatgtctcttgttcaattgaggttatggttgttaattgatgttgtgattgatgaatcattgcttgggtatgcatattcatga 24929044  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataagttgttgttgaattatgatggagtgtatgatt 206  Q
     ||| || ||| ||  || ||||||||||||| ||| |||||||| ||||||        || || | |||||||||||| ||||||||| || |||||     
T  24929045 tttgttgttgagaa-atggattgttgttggtggttttgtgaaattggtgaat--------tacgacatgttgttgttgaaatatgatggaatgcatgatc 24929135  T
Q  207 atatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    ||| ||| || |||||||| ||||||||||   |||||||||||    
T  24929136 ataagttctggttgtggttaattgttgatgataatctcattgca 24929179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 30120766 - 30120690
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||| | ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  30120766 ttgatgaataattgcttgggtttgcatattcatcgattgatgatgataatttgaattg-tgttggtgttttggtgaaa 30120690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 23837308 - 23837154
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attca 103  Q
    ||||||| ||||||||| | || || || ||| ||||||||||||||| ||||||  |||||||| |||||||| |||| | |||||||| ||| |||||    
T  23837308 atgttgttgttgaattgtggtaagagtcatgttcaattgatgttgttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcataattca 23837209  T
Q  104 tggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaatt 159  Q
    ||  ||| |||||| ||  ||| |||||| ||||| ||| |||||||| |||||||    
T  23837208 tgatttgttgatgagaa-atgagttgttggtggtggttttgtgaaattggtgaatt 23837154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 21844780 - 21844856
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||| | ||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||    
T  21844780 ttgatgaataattgcttgggtttgcatattcattgattgttgatgagaatttgaattg-tgttggtgttttggtgaaa 21844856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 21852173 - 21852249
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||| | ||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||    
T  21852173 ttgatgaataattgcttgggtttgcatattcattgattgttgatgagaatttgaattg-tgttggtgttttggtgaaa 21852249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 22321597 - 22321654
Alignment:
Q  179 ttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    ||||| |||| ||||||| || ||||||||||||| ||||||||||||||||||||||    
T  22321597 ttgttaaattgtgatggaatgcatgattatatgttgtgattgtggttgattgttgatg 22321654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 13662481 - 13662561
Alignment:
Q  76 tgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaa 157  Q
    ||||||||  |||||||||||||| | ||||||||||||||| ||  | |||||||||||||| ||| |||||||| |||||    
T  13662481 tgaatcatgatttgggtatacataattatggattgatgatgagaa-ctaaattgttgttggtggttttgtgaaattggtgaa 13662561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 16674624 - 16674672
Alignment:
Q  96 catattcatggattgatgatgaaaatttgaattgttgttggtgttttggt 145  Q
    |||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  16674624 catattcatggattgatgatgagaatttgagttg-tgttggtgttttggt 16674672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 41246650 - 41246613
Alignment:
Q  123 tgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
    |||| |||||||||||||||||||||||||||||||||    
T  41246650 tgaaatgttgttggtgttttggtgaaatttgtgaattg 41246613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 23218004 - 23217924
Alignment:
Q  156 aattgaagaaatatgataagttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||| ||| ||||| | |||||||||||| | ||||||| || ||||||||| ||| |  |||||||||||||||||||    
T  23218004 aattgatgaattatgacatgttgttgttgaaatgtgatggaatgcatgattataagttgtagttgtggttgattgttgatg 23217924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 41507116 - 41507191
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    |||||||||||| ||||||||| || ||||| ||| ||| || |||||||| ||||||||||   |||||||||||    
T  41507116 gttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgataatctcattgca 41507191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 22981299 - 22981241
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttg 233  Q
    |||||||||||||| ||||||| || ||||||||| ||| |  ||||||||||||||||    
T  22981299 gttgttgttgaattttgatggaatgcatgattataagttgttgttgtggttgattgttg 22981241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 7293132 - 7292886
Alignment:
Q  1 tgacatgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatat 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  7293132 tgacatgttgttgttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcattgcttgggtatacatat 7293033  T
Q  101 tcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataagttgttgttgaattatgatggagtgt 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7293032 tcatggattgatgatgagaatttgaattgttgttggtgttttggtgaaatttgtgaattgatgaaatatgataagttgttgttgaattatgatggagtgt 7292933  T
Q  201 atgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||| |||||||||||||||||||||||  ||||||||    
T  7292932 atgattatatgttgtgattgtggttgattgttgatgttgatctcatt 7292886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 13037179 - 13037322
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||| ||||| |  ||  |||| |||||||| ||||||||||||| | |||||||| |||||||||| ||||| |||||    
T  13037179 attgagttatgattcttgttcaattaatgttatgaatattaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgaggatga 13037278  T
Q  118 aaatttgaattgttgttggtgttttggtgaaatttgtgaattga 161  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  13037279 gaatttgaattgttgttggtgttttggtgaaatttgtgaattga 13037322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 11580904 - 11581035
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | ||||||||||||||||||| ||||| || ||    
T  11580904 attgagttatgattcttgttcaattgatgttatggctgttaattgatgttgtggttgatgaatcattgcttgggtatacatattcatgaattgaggacga 11581003  T
Q  118 aaatttgaattgttgttggtgttttggtgaaa 149  Q
     |||||||||||||||||||||||||||||||    
T  11581004 gaatttgaattgttgttggtgttttggtgaaa 11581035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 36052756 - 36052634
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||||| | || |||| |||||||| |||||||||| || | |||||||| |||||||||| ||||||||||| ||||||||    
T  36052756 tgattcttgttcaattgatgttgtggttgttaattgatgttgtggttgatgaataattgcttgggtatgcatattcatgaattgatgatgagaatttgaa 36052657  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||    
T  36052656 ttgttgttggtgttttggtgaaa 36052634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 47481185 - 47481320
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||||||| ||||||||||| | | |  |||| |||||| | ||||||||||||| | |||||||| ||||||||||     
T  47481185 gttgttgttgaattgagttatgattcttgttcaattgatgttatcgctcttaattgatgtttttgttgatgaatcattgcttgggtatgcatattcatga 47481284  T
Q  107 attgatgatgaaaatttgaattgttgttggtgtttt 142  Q
    ||||||||||| ||||||||||||||||||||||||    
T  47481285 attgatgatgataatttgaattgttgttggtgtttt 47481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 16479124 - 16479244
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaa-tttga 125  Q
    |||||||||  ||||||||||| ||| || || | |||||||| ||||||||||||  | |||||||| ||||||||||||||||||||||||| |||||    
T  16479124 tgattcttgctcaattgatgttattgttgttatttgatgttgttgttgatgaatcactgcttgggtatgcatattcatggattgatgatgaaaattttga 16479223  T
Q  126 attgttgttggtgttttggtg 146  Q
    |||||||||||||||||||||    
T  16479224 attgttgttggtgttttggtg 16479244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 13321117 - 13320988
Alignment:
Q  13 gttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgat 112  Q
    ||||||||||| |||||||| ||| ||||||||||| ||| || |||| |||||||| |||||||||||||   |||||| | || ||||||| ||||||    
T  13321117 gttgaattgagatatgattcatgttcaattgatgttattgttgttaattgatgttgttgttgatgaatcatgacttgggtttgcacattcatgaattgat 13321018  T
Q  113 gatgaaaatttgaattgttgttggtgtttt 142  Q
    ||||| |||||| |||||||||||||||||    
T  13321017 gatgagaatttggattgttgttggtgtttt 13320988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 11516337 - 11516265
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  11516337 gttgttgttgaattatgatggagtgtatgagtatatgttatgattgtggttgattgttgatgttgatctcatt 11516265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 15441717 - 15441789
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  15441717 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 15441789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 30262282 - 30262354
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  30262282 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 30262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 16211855 - 16211733
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    ||||||||||  |||||||||| | | || |||| |||||||| |||||||| |||| | |||||||| |||||||||| ||| |||| || ||||||||    
T  16211855 tgattcttgttaaattgatgttatggttgttaattgatgttgtggttgatgattcattgcttgggtatgcatattcatgaattaatgaagagaatttgaa 16211756  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||    
T  16211755 ttgttgttggtgttttggtgaaa 16211733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 18254009 - 18254130
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | |||| |||| ||||||||  ||||||||| || |  || |||| |||||||||||||||||||||| ||||||||    
T  18254009 tgattcttgttcaattgatgttatggatgttaattgatgttgtgattgatgaataattgcctgagtatgcatattcatggattgatgatgagaatttgaa 18254108  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  18254109 ttg-tgttggtgttttggtgaaa 18254130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 3060064 - 3059933
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| |   || |||| |||||||| ||||||||||||| | |||||||| |||||||||| ||||| |||||    
T  3060064 attgagttatgattcttgttcaattgatgttatgactgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgaggatga 3059965  T
Q  118 aaatttgaattgttgttggtgttttggtgaaa 149  Q
     |||||||  |||||| ||||||||| |||||    
T  3059964 taatttgagatgttgtgggtgttttgatgaaa 3059933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 2437477 - 2437425
Alignment:
Q  96 catattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2437477 catattcatggattgatgatgaaaatttgaattg-tgttggtgttttggtgaaa 2437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 10989454 - 10989378
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||| | |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  10989454 ttgatgaataattgcttgggtttgcatattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 10989378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 296128 - 296257
Alignment:
Q  14 ttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatg 113  Q
    |||||||| | | |||||| ||| ||||||||||||||| |  |||| ||||||||   |||||||| |  | |||||||| | ||||||||||||||||    
T  296128 ttgaattgtgttgtgattcatgttcaattgatgttgttgctattaattgatgttgt---tgatgaattactgattgggtatgcttattcatggattgatg 296224  T
Q  114 atgaaaatttgaattgttgttggtgttttggtg 146  Q
     |||||| |||||||  ||||||||||||||||    
T  296225 ttgaaaaattgaatttgtgttggtgttttggtg 296257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 13572705 - 13572644
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | ||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  13572705 ttgggtttgcatattcatggattgttgatgagaatttgagttg-tgttggtgttttggtgaaa 13572644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 13352079 - 13351999
Alignment:
Q  156 aattgaagaaatatgataagttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||| ||| ||||| | ||||||||||||||  |||||| || ||||||||| ||| || ||||||| |||||||||||    
T  13352079 aattgatgaattatgacatgttgttgttgaattgggatggaatgcatgattataagttgtggttgtggtagattgttgatg 13351999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 13911248 - 13911292
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgtt 131  Q
    |||||| | |||||||||||||||||||||| |||||||||||||    
T  13911248 ttgggtttgcatattcatggattgatgatgagaatttgaattgtt 13911292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 15822691 - 15822723
Alignment:
Q  128 tgttgttggtgttttggtgaaatttgtgaattg 160  Q
    |||||||||||||||||||||||||||||||||    
T  15822691 tgttgttggtgttttggtgaaatttgtgaattg 15822723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 25292572 - 25292633
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | ||||||||||||||| | |||| ||||||| ||| |||||||||||||||||||    
T  25292572 ttgggtttgcatattcatggattgttaatgagaatttgagttg-tgttggtgttttggtgaaa 25292633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 17224075 - 17224230
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attca 103  Q
    ||||||| |||||||||   || || || ||| ||||||||||||||| ||||||  ||||||||   |||||| |||| | |||||||| ||| |||||    
T  17224075 atgttgttgttgaattgttgtaagagtcatgttcaattgatgttgttgttgctaagtgatgttgttaatgatgattcatggcttgggtattcataattca 17224174  T
Q  104 tggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
    ||  ||| |||||| ||  ||| |||||||||||| ||| || ||||| ||||||||    
T  17224175 tgatttgttgatgagaa-atgagttgttgttggtggttttgtaaaattggtgaattg 17224230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 26680316 - 26680070
Alignment:
Q  1 tgacatgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  26680316 tgacatgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcattgcttgggtatacatat 26680217  T
Q  101 tcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataagttgttgttgaattatgatggagtgt 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||    
T  26680216 tcatggattgatgatgagaatttgaattgttgttggtgttttggtgaaatttgggaatcgatgaaatatgataagttgttgttgaattatgatggagtgt 26680117  T
Q  201 atgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||    
T  26680116 atgattatatgttatgattgtggttgattgttgatgttgatctcatt 26680070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 15675243 - 15675381
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||| ||| || |||| |||||||| ||||||||||||| | |||||||||||||||||||     
T  15675243 gttgttgttgaattgagatatgattcatgttcaattgatgttattgttgttaattgatgttgttgttgatgaatcattgcttgggtatacatattcatga 15675342  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggt 145  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15675343 attgatgatgaaaatttgaattgttgttggtgttttggt 15675381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 31115738 - 31115603
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||| ||| || |||| |||||||| ||||||||||||| | |||||||||||||||||||     
T  31115738 gttgttgttgaattgagatatgattcatgttcaattgatgttattgttgttaattgatgttgttgttgatgaatcattgcttgggtatacatattcatga 31115639  T
Q  107 attgatgatgaaaatttgaattgttgttggtgtttt 142  Q
    ||||||||||||||||||||||||||||||||||||    
T  31115638 attgatgatgaaaatttgaattgttgttggtgtttt 31115603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 13246528 - 13246386
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | |||||||| |||||||||| ||||| |||||    
T  13246528 attgagttatgattcttgttcaattgatgttatggctgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgaggatga 13246429  T
Q  118 aaatttgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
     ||||||||||||||||||||||||||||||||||||||||||    
T  13246428 gaatttgaattgttgttggtgttttggtgaaatttgtgaattg 13246386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 54118416 - 54118551
Alignment:
Q  25 tatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttg 124  Q
    |||||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | |||||||| |||||||||| ||||||||||| ||||||    
T  54118416 tatgattcttgttcaattgatgttatagttgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgatgatgagaatttg 54118515  T
Q  125 aattgttgttggtgttttggtgaaatttgtgaattg 160  Q
    ||||||||||||||||||||||||| | ||||||||    
T  54118516 aattgttgttggtgttttggtgaaaatggtgaattg 54118551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 10104440 - 10104523
Alignment:
Q  62 gatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggt 145  Q
    |||||||| ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10104440 gatgttgttgttgatgaatcattgcttgggtatacatattcatgaattgatgatgaaaatttgaattgttgttggtgttttggt 10104523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 111493 - 111362
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | |||||||| |||||||||| ||||| |||||    
T  111493 attgagttatgattcttgttcaattgatgttatggttgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgaggatga 111394  T
Q  118 aaatttgaattgttgttggtgttttggtgaaa 149  Q
     |||||||  |||||||||||||||| |||||    
T  111393 taatttgagatgttgttggtgttttgatgaaa 111362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 10488672 - 10488600
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  10488672 gttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 10488600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 16328079 - 16328134
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattg 230  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  16328079 gttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattg 16328134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 10644328 - 10644187
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||| ||||| | |||||| ||| ||||||||||| |  ||| || | ||| || |  ||||||||| || | |||||| | |||||||||||    
T  10644328 gttgttgttgatttgagatgtgattcatgttcaattgatgttatgaatgttatttgatattatgattgatgaataattgcttgggtttgcatattcatgg 10644229  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  10644228 attgatgatgagaatttgaattg-tgttggtgttttggtgaaa 10644187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 7850044 - 7849970
Alignment:
Q  71 gttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtg 146  Q
    |||||||||||||   ||| ||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||    
T  7850044 gttgatgaatcatgacttgagtatacataatcatgaattggtgatgaaaatttgaattg-tgttggtgttttggtg 7849970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 47357698 - 47357622
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | ||||||||  ||||||||||||||||||||| |||||||  || |||||||||||||||||||    
T  47357698 ttgatgaataattgattgggtatgtatattcatggattgatgatgagaatttgagctg-tgttggtgttttggtgaaa 47357622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 41166083 - 41166177
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacata 99  Q
    ||||||| ||||||||| |  | || || ||| ||||||||||||||| ||||||  |||||||| ||||||||||||| | |||||||| ||||    
T  41166083 atgttgttgttgaattgtggcaagagtcatgttcaattgatgttgttgttgctaagtgatgttgttgttgatgaatcatggcttgggtattcata 41166177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 15044938 - 15044794
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attca 103  Q
    ||||||| ||||||||| | || ||||| ||| ||||||||||||||| ||||||  |||||||| | |||||| |||| | |||||| | ||| | |||    
T  15044938 atgttgttgttgaattgtgataagattcatgttcaattgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttgggtgttcataaatca 15044839  T
Q  104 tggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||  |||||||||| ||  | ||||||||||| || ||||||||||    
T  15044838 tgatttgatgatgagaa-ataaattgttgttgttgctttggtgaaa 15044794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 19559471 - 19559410
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||||||||||| ||||||| || ||||||||| ||| || ||||||| |||||||||||    
T  19559471 gttgttgttgaattgtgatggaatgcatgattataagttgtggttgtggtagattgttgatg 19559410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 44055902 - 44055870
Alignment:
Q  128 tgttgttggtgttttggtgaaatttgtgaattg 160  Q
    |||||||||||||||||||||||||||||||||    
T  44055902 tgttgttggtgttttggtgaaatttgtgaattg 44055870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 8374619 - 8374504
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcat 104  Q
    ||||||| |||||| |||| | |||||| ||| | ||||||||||||| |  |||  |||||||| || | ||||| || | ||||||||||||| | ||    
T  8374619 atgttgttgttgaaatgagatgtgattcatgttccattgatgttgttgctattaactgatgttgttgtgggtgaattatggcttgggtatacataattat 8374520  T
Q  105 ggattgatgatgaaaa 120  Q
     |||||||||||||||    
T  8374519 cgattgatgatgaaaa 8374504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 10104404 - 10104449
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttg 52  Q
    ||||| ||||||||||| |||||||| ||| |||||||||||||||    
T  10104404 gttgttgttgaattgagatatgattcatgttcaattgatgttgttg 10104449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 15109486 - 15109630
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attca 103  Q
    ||||||| ||||||||| | || ||||| ||| ||||||||||||||| ||||||   ||||||| | |||||| |||| | |||||| | ||| | |||    
T  15109486 atgttgttgttgaattgtgataagattcatgttcaattgatgttgttgttgctaagtaatgttgttgatgatgattcatggcttgggtgttcataaatca 15109585  T
Q  104 tggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||  |||||||||| ||  | ||||||||||| || ||||||||||    
T  15109586 tgatttgatgatgagaa-ataaattgttgttgttgctttggtgaaa 15109630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 13809647 - 13809711
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgt 69  Q
    ||||||| ||||||||| | || ||||| ||  ||||||||||||||| ||||||| ||||||||    
T  13809647 atgttgttgttgaattgtgataagattcatgatcaattgatgttgttgttgctaattgatgttgt 13809711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 52265645 - 52265757
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attca 103  Q
    ||||||| ||||||||| | || ||||| ||| ||||||||||||||| ||||||  ||| |||  |||||||| |||| | |||||| | ||| |||||    
T  52265645 atgttgttgttgaattgtgataagattcatgttcaattgatgttgttgttgctaagtgatattgatgttgatgattcatggcttgggtgttcataattca 52265744  T
Q  104 tggattgatgatg 116  Q
    ||  |||||||||    
T  52265745 tgatttgatgatg 52265757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 37213 - 37459
Alignment:
Q  1 tgacatgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatat 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  37213 tgacatgttgtagttggattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcattgcttgggtatacatat 37312  T
Q  101 tcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataagttgttgttgaattatgatggagtgt 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  37313 tcatggattgatgatgagaatttgaattgttgttggtgttttggtgaaatttgtgaattgatgaaatatgataagtttttgttgaattatgatggagtgt 37412  T
Q  201 atgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||| |||||||||||||||||| ||||  ||||||||    
T  37413 atgattatatgttgtgattgtggttgattgttaatgttgatctcatt 37459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 16744262 - 16744508
Alignment:
Q  1 tgacatgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatat 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||| |    
T  16744262 tgacatgttatagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaataaatgttgtagttgatgaatcattgcttgggtatacatgt 16744361  T
Q  101 tcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataagttgttgttgaattatgatggagtgt 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16744362 tcatggattgatgatgagaatttgaattgttgttggtgttttggtgaaatttgtgaattgaggaaatatgataagttgttgttgaattatgatggagtgt 16744461  T
Q  201 atgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||||    
T  16744462 atgattatatgttatgattgtggttgatagttgatgttgatctcatt 16744508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 15859178 - 15859331
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | |||||||| ||||||||||     
T  15859178 gttgttgttgaattgagttatgattcttgttcaattgatgttatggctgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatga 15859277  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| | ||||||||    
T  15859278 attgatgatgagaatttgaattgttgttgttgttttggtgaaaatggtgaattg 15859331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 17912633 - 17912771
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcat 104  Q
    |||||||||||||||||||||||||||| ||| |||| |||||| ||| || |||| |||||||| ||||||||||||  | |||||||| |||||||||    
T  17912633 atgttgtagttgaattgagctatgattcatgttcaatcgatgttattgttgttaattgatgttgttgttgatgaatcactgcttgggtatgcatattcat 17912732  T
Q  105 ggattgatgatgaaaatttgaattgttgttggtgttttg 143  Q
    | ||||||||||||||||||||||||||| |||||||||    
T  17912733 gaattgatgatgaaaatttgaattgttgtgggtgttttg 17912771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 15468555 - 15468717
Alignment:
Q  75 atgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtg-aattgaagaaatatgata 173  Q
    ||||||||| | |||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||  ||| ||||| |    
T  15468555 atgaatcattgcttgggtatgcatattcatgaattgatgatgagaatttgaattgttgttgttgttttggtgaaatttgtgaaattggtgaattatgaca 15468654  T
Q  174 agttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
     ||||||||||||  |||||||| |||||||| ||| ||| || |||||||| ||||||||||    
T  15468655 tgttgttgttgaaacatgatggaatgtatgatcataagttgtggttgtggttaattgttgatg 15468717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 2049899 - 2049777
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    ||||| |||| ||||||||| | | | || |||| |||||||| ||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||    
T  2049899 tgatttttgttcaattgatgctatggttgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgatgatgaaaatttgaa 2049800  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||    
T  2049799 ttgttgttggtgttttggtgaaa 2049777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 22275250 - 22275088
Alignment:
Q  75 atgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtg-aattgaagaaatatgata 173  Q
    ||||||||| | || ||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||   ||| ||||| |    
T  22275250 atgaatcattgcttaggtatgcatattcatgaattgatgatgagaatttgaattgttgttggtgttttggtgaaatttgtgaaattagtgaattatgaca 22275151  T
Q  174 agttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
     ||||||||||||  |||||||| || ||||| ||| ||| || |||||||| ||||||||||    
T  22275150 tgttgttgttgaaacatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 22275088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 12030321 - 12030443
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||| | | | || |||| |||||| | ||||||||||||| | |||||||| |||||||||| ||||||||||| ||||||||    
T  12030321 tgattcttgttcaattgatgctatggttgttaattgatgttatggttgatgaatcattgcttgggtatgcatattcatgaattgatgatgagaatttgaa 12030420  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||    
T  12030421 ttgttgttggtgttttggtgaaa 12030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 15614923 - 15614808
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||  ||||||||||| | | || |||| |||||||||||||||||||||| | |||||||| |||||||||| |||||| |||| ||||||||    
T  15614923 tgattcttgctcaattgatgttatggttgttaattgatgttgtagttgatgaatcattgcttgggtatgcatattcatgaattgattatgagaatttgaa 15614824  T
Q  127 ttgttgttggtgtttt 142  Q
    ||||||||||||||||    
T  15614823 ttgttgttggtgtttt 15614808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 13839003 - 13838769
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| |||| |||||| |||||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| |||||||||| ||||||||||     
T  13839003 gttgtggttggattgagttatgattcttgttcaattgatgttatggctgttaattgatgttgtggttgatgaatcattgtttgggtatgcatattcatga 13838904  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataagttgttgttgaattatgatggagtgtatgatt 206  Q
     ||| || ||| ||  || ||||||||||||| ||| |||||||| ||||||        || || | |||||||||||| ||||||||| || |||||     
T  13838903 tttgttgttgagaa-atggattgttgttggtggttttgtgaaattggtgaat--------tacgacatgttgttgttgaaatatgatggaatgaatgatc 13838813  T
Q  207 atatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    ||| ||| || |||||||| ||||||||||   |||||||||||    
T  13838812 ataagttgtggttgtggttaattgttgatgataatctcattgca 13838769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 14842735 - 14842856
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | |||| |||| |||||| |  ||||||||| || | |||||| | |||||||||||||||||||||||||||||||    
T  14842735 tgattcttgttcaattgatgttatggatgttaattgatgttatgattgatgaataattgattgggtttgcatattcatggattgatgatgaaaatttgaa 14842834  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  14842835 ttg-tgttggtgttttggtgaaa 14842856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 47984759 - 47984624
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| |||| |||||| | |||||| ||| ||||||||||| ||| || |||| |||||||| |||||||||||||   |||||||| ||||||||||     
T  47984759 gttgttgttggattgagatgtgattcatgttcaattgatgtttttgttgttaattgatgttgttgttgatgaatcatgacttgggtatgcatattcatga 47984660  T
Q  107 attgatgatgaaaatttgaattgttgttggtgtttt 142  Q
    ||||||||||| |||||||||||||| || ||||||    
T  47984659 attgatgatgagaatttgaattgttgctgatgtttt 47984624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 48003333 - 48003198
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| |||| |||||| | |||||| ||| ||||||||||| ||| || |||| |||||||| |||||||||||||   |||||||| ||||||||||     
T  48003333 gttgttgttggattgagatgtgattcatgttcaattgatgtttttgttgttaattgatgttgttgttgatgaatcatgacttgggtatgcatattcatga 48003234  T
Q  107 attgatgatgaaaatttgaattgttgttggtgtttt 142  Q
    ||||||||||| |||||||||||||| || ||||||    
T  48003233 attgatgatgagaatttgaattgttgctgatgtttt 48003198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 15936801 - 15936922
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | |||| |||| ||||||||  ||||||||| || |  || |||| |||||||||||||||||||||| ||||||||    
T  15936801 tgattcttgttcaattgatgttatggatgttaattgatgttgtgattgatgaataattgcctgagtatgcatattcatggattgatgatgagaatttgaa 15936900  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  15936901 ttg-tgttggtgttttggtgaaa 15936922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 15938643 - 15938764
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | |||| |||| ||||||||  ||||||||| || |  || |||| |||||||||||||||||| ||||||||||||    
T  15938643 tgattcttgttcaattgatgttatggatgttaattgatgttgtgattgatgaataattgcctgagtatgcatattcatggattgatgctgaaaatttgaa 15938742  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  15938743 ttg-tgttggtgttttggtgaaa 15938764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 47994046 - 47993911
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| |||| |||||| | |||||| ||| ||||||||||| ||| || |||| ||| |||| |||||||||||||   |||||||| ||||||||||     
T  47994046 gttgttgttggattgagatgtgattcatgttcaattgatgtttttgttgttaattgattttgttgttgatgaatcatgacttgggtatgcatattcatga 47993947  T
Q  107 attgatgatgaaaatttgaattgttgttggtgtttt 142  Q
    ||||||||||| |||||||||||||| || ||||||    
T  47993946 attgatgatgagaatttgaattgttgctgatgtttt 47993911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 48012619 - 48012484
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| |||| |||||| | |||||| ||| ||||||||||| ||| || |||| ||| |||| |||||||||||||   |||||||| ||||||||||     
T  48012619 gttgttgttggattgagatgtgattcatgttcaattgatgtttttgttgttaattgattttgttgttgatgaatcatgacttgggtatgcatattcatga 48012520  T
Q  107 attgatgatgaaaatttgaattgttgttggtgtttt 142  Q
    ||||||||||| |||||||||||||| || ||||||    
T  48012519 attgatgatgagaatttgaattgttgctgatgtttt 48012484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 2449391 - 2449463
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  2449391 gttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 2449463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 51158183 - 51158325
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | |||||||| |||||||||| ||||| ||||     
T  51158183 attgagttatgattcttgttcaattgatgttatggctgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgaggatgt 51158282  T
Q  118 aaatttgaattgttgtt-ggtgttttggtgaaatttgtgaattg 160  Q
     |||||||  |||||||  |||||||| | ||||||||||||||    
T  51158283 taatttgagatgttgttaagtgttttgct-aaatttgtgaattg 51158325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 19231997 - 19231945
Alignment:
Q  97 atattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  19231997 atattcatgaattgatgatgataatttggattgttgttggtgttttggtgaaa 19231945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 41270104 - 41270043
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  41270104 ttgggtttgcatattcatggattgatgatgagaatttgagttg-tgttggtgttttggtgaaa 41270043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 55316248 - 55316187
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  55316248 ttgggtttgcatattcatggattgatgatgagaatttgagttg-tgttggtgttttggtgaaa 55316187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 18970048 - 18969968
Alignment:
Q  156 aattgaagaaatatgataagttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||| ||| ||||| | |||||||||||||| |||||||  | ||||||||| ||| || |||||||||||||||||||    
T  18970048 aattgatgaattatgacatgttgttgttgaattctgatggaaagcatgattataagttgtggttgtggttgattgttgatg 18969968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 13955124 - 13955185
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | ||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  13955124 ttgggtttgcatattcatggattgttgatgataatttgagttg-tgttggtgttttggtgaaa 13955185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 13975956 - 13976017
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | ||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  13975956 ttgggtttgcatattcatggattgttgatgataatttgagttg-tgttggtgttttggtgaaa 13976017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 45860834 - 45860773
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | ||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  45860834 ttgggtttgcatattcatggattgttgatgagaatttgagttg-tgttggtgttttggtgaaa 45860773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 22144532 - 22144564
Alignment:
Q  128 tgttgttggtgttttggtgaaatttgtgaattg 160  Q
    |||||||||||||||||||||||||||||||||    
T  22144532 tgttgttggtgttttggtgaaatttgtgaattg 22144564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 48421685 - 48421624
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||||||||| ||||||||| || |||||||||  || || |||||||| ||||||||||    
T  48421685 gttgttgttgaaatatgatggaatgcatgattataaattgtggttgtggttaattgttgatg 48421624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 12264938 - 12265050
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcat 104  Q
    ||||||| |||||| |||| | |||||| ||| | ||||||||||||| |  |||  |||||||| || | ||||| ||   ||||||||||||| | ||    
T  12264938 atgttgttgttgaaatgagatgtgattcatgttccattgatgttgttgctattaactgatgttgttgtgggtgaattatgacttgggtatacataattat 12265037  T
Q  105 ggattgatgatga 117  Q
    |||||||||||||    
T  12265038 ggattgatgatga 12265050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 22053987 - 22054125
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||| ||| || |||| |||||||| ||||||||||||| | |||||| ||||||||||||     
T  22053987 gttgttgttgaattgagatatgattcatgttcaattgatgttattgctgttaattgatgttgttgttgatgaatcattgcttgggtctacatattcatga 22054086  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggt 145  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22054087 attgatgatgaaaatttgaattgttgttggtgttttggt 22054125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 18531221 - 18531355
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||| ||| || |||| |||||||| ||||||||||||| | | |||||||||||||||||     
T  18531221 gttgttgttgaattgagatatgattcatgttcaattgatgttattgctgttaattgatgttgttgttgatgaatcattgctcgggtatacatattcatga 18531320  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttt 141  Q
    |||||||||||||||||||||||||||||||||||    
T  18531321 attgatgatgaaaatttgaattgttgttggtgttt 18531355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 27182712 - 27182854
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | ||| |||| |||||||||| |||||||||||    
T  27182712 attgagttatgattcttgttcaattgatgttatggctgttaattgatgttgtggttgatgaatcattgcttgagtatgcatattcatgaattgatgatga 27182811  T
Q  118 aaatttgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
     |||||||||||||||||||||||||||||||||| |||||||    
T  27182812 gaatttgaattgttgttggtgttttggtgaaatttttgaattg 27182854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 34939379 - 34939248
Alignment:
Q  15 tgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatga 114  Q
    ||||||||| |||||||||||| || |||||||| ||| || |||| |||||||| ||||||||||||  | |||||||| |||||||||| || | |||    
T  34939379 tgaattgagttatgattcttgttcagttgatgttattgctgttaattgatgttgttgttgatgaatcactgcttgggtatgcatattcatgaataggtga 34939280  T
Q  115 tgaaaatttgaattgttgttggtgttttggtg 146  Q
    ||||||||||||||||||||||||||||||||    
T  34939279 tgaaaatttgaattgttgttggtgttttggtg 34939248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 23507054 - 23506932
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | | || |||| |||||||| |||||||||| || | |||||||| |||||||||| ||||||||||| ||||||||    
T  23507054 tgattcttgttcaattgatgttatggttgttaattgatgttgtggttgatgaataattgcttgggtatgcatattcatgaattgatgatgagaatttgaa 23506955  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||    
T  23506954 ttgttgttggtgttttggtgaaa 23506932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 17471803 - 17471956
Alignment:
Q  75 atgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataa 174  Q
    ||||||||| | |||||||  |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||        ||||| |     
T  17471803 atgaatcattgcttgggtacgcatattcatgaattgatgatgagaatttgaattgttgttggtgttttggtgaaattggtgaat--------tatgacat 17471894  T
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    ||||||||||||  |||||||| || ||||| ||| ||| || |||||||| ||||||||||    
T  17471895 gttgttgttgaaacatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 17471956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 20623079 - 20623007
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  20623079 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 20623007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 21233681 - 21233753
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  21233681 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 21233753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 25900558 - 25900630
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  25900558 gttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 25900630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 37052854 - 37052782
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  37052854 gttgttgttgagttatgatggagggtatgattatatgttatgattgtggttgattgatgatgttgatctcatt 37052782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 12418 - 12342
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  12418 ttgatgaataattgcttgggtatgcatattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 12342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 18778200 - 18778276
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  18778200 ttgatgaataattgcttgggtatgcatattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 18778276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 21073803 - 21073879
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  21073803 ttgatgaataattgcttgggtatgcatattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 21073879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 22366689 - 22366765
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  22366689 ttgatgaataattgcttgggtatgcatattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 22366765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 25426672 - 25426596
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  25426672 ttgatgaataattgcttgggtatgcatattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 25426596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 29190479 - 29190552
Alignment:
Q  69 tagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgtttt 142  Q
    ||||||||||||||| | |||||||| |||||||||| |||||| |||| ||||||||||||||||||||||||    
T  29190479 tagttgatgaatcattgcttgggtatgcatattcatgaattgattatgagaatttgaattgttgttggtgtttt 29190552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 16536307 - 16536235
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||  ||||||||    
T  16536307 gttgttgttgaattatgatggagggtatgattgtatgttatgattgtagttgattgatgatgttgatctcatt 16536235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 19499925 - 19499867
Alignment:
Q  90 ggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  19499925 ggtatgcatattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 19499867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 43443603 - 43443679
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||| | ||||||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  43443603 ttgatgaataattgcttgggtttgcatattcatggattgatgatgaggatttgaattg-tgttggtgttttggtgaaa 43443679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 27009870 - 27009809
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | ||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  27009870 ttgggtttgcatattcatggattgttgatgagaatttgagttg-tgttggtgttttggtgaaa 27009809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 4200126 - 4200251
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcat 104  Q
    ||||||| ||||| ||||| | |||||| ||| ||||||||||| |  ||| || | ||| || |  ||||||||| || | |||||| | |||||||||    
T  4200126 atgttgttgttgatttgagatgtgattcatgttcaattgatgttatgaatgttatttgatattatgattgatgaatgattgcttgggtttgcatattcat 4200225  T
Q  105 ggattgatgatgaaaatttgaattgt 130  Q
    || |||||||||| ||||||||||||    
T  4200226 gggttgatgatgagaatttgaattgt 4200251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 23494029 - 23493916
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attca 103  Q
    ||||||| ||||||||| | || ||||| ||| ||||||||||||||| ||||||  |||||||| | |||||| |||| | |||||| | ||| |||||    
T  23494029 atgttgttgttgaattgtgataagattcatgttcaattgatgttgttgttgctaagtgatgttgttgatgatgattcatggcttgggtgttcataattca 23493930  T
Q  104 tggattgatgatga 117  Q
    ||  ||||||||||    
T  23493929 tgatttgatgatga 23493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 2031758 - 2031683
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    |||||||||||| ||||||||| || ||||| ||| ||| || |||||||| ||||||||||   |||||||||||    
T  2031758 gttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgataatctcattgca 2031683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 7728530 - 7728466
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgt 69  Q
    ||||||| ||||||||| | || ||||| ||| ||||||||||||||| ||||||  ||||||||    
T  7728530 atgttgttgttgaattgtgataagattcatgttcaattgatgttgttgttgctaagtgatgttgt 7728466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 9480 - 9338
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | |||||||| |||||||||| |||||||||||    
T  9480 attgagttatgattcttgttcaattgatgttatggctgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgatgatga 9381  T
Q  118 aaatttgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
     ||||||||||||||||||||||||||||||| | ||||||||    
T  9380 gaatttgaattgttgttggtgttttggtgaaaatggtgaattg 9338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 19315 - 19173
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||| ||| || |||| |||||||| ||||||||||||| | |||||||| ||||||||||     
T  19315 gttgttgttgaattgagttatgattcctgttcaattgatgttattgctgttaattgatgttgttgttgatgaatcattgcttgggtatgcatattcatga 19216  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  19215 attgatgatgagaatttgaattattgttggtgttttggtgaaa 19173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 21399 - 21257
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||| ||| || |||| |||||||| ||||||||||||| | |||||||| ||||||||||     
T  21399 gttgttgttgaattgagttatgattcctgttcaattgatgttattgctgttaattgatgttgttgttgatgaatcattgcttgggtatgcatattcatga 21300  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  21299 attgatgatgagaatttgaattattgttggtgttttggtgaaa 21257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 149
Target Start/End: Original strand, 36982595 - 36982737
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||| ||| || |||| |||||||| ||||||||||||| |||||||||| ||||||||||     
T  36982595 gttgttgttgaattgagttatgattcctgttcaattgatgttattgttgttaattgatgttgttgttgatgaatcattgtttgggtatgcatattcatga 36982694  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||    
T  36982695 attgatgatgagaatttgaattattgttggtgttttagtgaaa 36982737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 19794858 - 19795011
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||||||| ||||||||||| ||   | |||| |||||| ||||||||||||||| | |||||||| |||||||||||    
T  19794858 gttgttgttgaattgagttatgattcttgttcaattgatgttatttccgttaattgatgttatagttgatgaatcattgcttgggtatgcatattcatgg 19794957  T
Q  107 attgatgatgaaaatttgaattgttgttggtg-ttttggtgaaatttgtgaattg 160  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||    
T  19794958 attgatgatgagaatttgaatttttgttggtgtttttggtgaaa-ttgtgaattg 19795011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 24341543 - 24341681
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||| ||| ||||||||||| ||| || |||| ||||||   ||||||||||||| | |||||||||||||||||||     
T  24341543 gttgttgttgaattgagatatgattcatgttcaattgatgttattgttgttaattgatgttcctgttgatgaatcattgcttgggtatacatattcatga 24341642  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggt 145  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  24341643 attgatgatgaaaatttgaattattgttggtgttttggt 24341681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 8891340 - 8891209
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| | | |  |||| |||||||| ||||||||||||| | |||||||| |||||||||| ||||| |||||    
T  8891340 attgagttatgattcttgttcaattgatgttatggctattaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgaggatga 8891241  T
Q  118 aaatttgaattgttgttggtgttttggtgaaa 149  Q
     ||||||||| |||||||||||||||||||||    
T  8891240 gaatttgaatggttgttggtgttttggtgaaa 8891209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 25265575 - 25265679
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggt 137  Q
    ||||||||||||||| || |||| |||||||| ||| ||||||||| | |||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  25265575 caattgatgttgttgttgttaattgatgttgttgtttatgaatcatggcttgggtatgcatattcatgaattgatgatgagaatttgaattgttgttggt 25265674  T
Q  138 gtttt 142  Q
    |||||    
T  25265675 gtttt 25265679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 7508030 - 7508138
Alignment:
Q  39 aattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaa-tttgaattgttgttggt 137  Q
    |||||||||| ||| || || | |||||||| ||||||||||||  | |||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  7508030 aattgatgttattgttgttatttgatgttgttgttgatgaatcactgcttgggtatgcatattcatggattgatgatgaaaattttgaattgttgttggt 7508129  T
Q  138 gttttggtg 146  Q
    |||||||||    
T  7508130 gttttggtg 7508138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 43643123 - 43643250
Alignment:
Q  19 ttgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaa 118  Q
    ||||| |||||||||||| ||||||||| | ||| || |||| |||||||||||||||||||||  | |||||||| |||||||||| |||||||||||     
T  43643123 ttgagatatgattcttgttcaattgatgctattgctgttaattgatgttgtagttgatgaatcactgcttgggtatgcatattcatgaattgatgatgat 43643222  T
Q  119 aatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||||   | ||||||||||||| |||||    
T  43643223 aatttga---gatgttggtgttttgatgaaa 43643250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 14906593 - 14906665
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  14906593 gttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 14906665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 20015121 - 20015049
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  20015121 gttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 20015049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 23820181 - 23820109
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  23820181 gttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 23820109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 462836 - 462706
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| | | || |||| ||||| ||  |||||||||||| | |||||||| |||||||||| ||||| ||| |    
T  462836 attgagttatgattcttgttcaattgatgttatggctgttaattgatgtcgtgattgatgaatcattgcttgggtatgcatattcatgaattgaggataa 462737  T
Q  118 aaatttgaattgttgttggtgttttggtgaaa 149  Q
     |||||||| |||||||||||||||| |||||    
T  462736 gaatttgaa-tgttgttggtgttttgatgaaa 462706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 19886869 - 19886945
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  19886869 ttgatgaataattgcttgggtatgcatattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 19886945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 19689554 - 19689600
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19689554 gttgttgttgaattatgatggagtgtatgattatatgttatgattgt 19689600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 20627489 - 20627609
Alignment:
Q  29 attcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaatt 128  Q
    |||||||| |||||||| || | | || |||| | |||||| ||||||||||||| | ||||||||  ||||||||| ||||| ||||| |||||||  |    
T  20627489 attcttgttcaattgattttatggttgttaattggtgttgtggttgatgaatcattgcttgggtatggatattcatgaattgaggatgataatttgagat 20627588  T
Q  129 gttgttggtgttttggtgaaa 149  Q
    ||||||||||||||| |||||    
T  20627589 gttgttggtgttttgatgaaa 20627609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 17396887 - 17396948
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | ||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  17396887 ttgggtttgcatattcatggattgttgatgagaatttgagttg-tgttggtgttttggtgaaa 17396948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 19669279 - 19669362
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attcatggattgatgatgaaaa 120  Q
    ||||||||||||||| ||||||  |||||| | |||||||| |||| | |||||||| ||| ||||||| | ||||||||||||    
T  19669279 caattgatgttgttgttgctaagtgatgttattgttgatgattcatggcttgggtattcataattcatgaactgatgatgaaaa 19669362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 25601972 - 25601897
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    |||||||||||| ||||||||| || ||||| ||| ||| || |||||||| ||||||||||   |||||||||||    
T  25601972 gttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgataatctcattgca 25601897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 9636821 - 9636761
Alignment:
Q  39 aattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacata 99  Q
    |||||||||||||| || ||| |||| |||| |||||||| |||| |||||||||| ||||    
T  9636821 aattgatgttgttgttgttaagagatattgttgttgatgattcatagtttgggtattcata 9636761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 19666605 - 19666525
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attcatggattgatgatga 117  Q
    ||||||||||||||| ||||||  ||| |||| |||||||| |||| | |||||||| ||| |||||||  ||||||||||    
T  19666605 caattgatgttgttgttgctaagtgatattgtcgttgatgattcatggcttgggtattcataattcatgttttgatgatga 19666525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 24884762 - 24884718
Alignment:
Q  39 aattgatgttgttgatgctaatagatgttgtagttgatgaatcat 83  Q
    |||||||||||||| ||||||||||| |||| |||||||| ||||    
T  24884762 aattgatgttgttgttgctaatagatattgttgttgatgattcat 24884718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 32465845 - 32465813
Alignment:
Q  128 tgttgttggtgttttggtgaaatttgtgaattg 160  Q
    ||||||||||||||||||||||||| |||||||    
T  32465845 tgttgttggtgttttggtgaaatttatgaattg 32465813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 8958 - 8820
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| |||||||  ||| ||||||||||| ||| |  |||| |||||||| ||||||||||||| | |||||||||||||||||||     
T  8958 gttgttgttgaattgagatatgattaatgttcaattgatgttattgctattaattgatgttgttgttgatgaatcattgcttgggtatacatattcatga 8859  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggt 145  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  8858 attgatgatgaaaatttgaatttttgttggtgttttggt 8820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 148810 - 148688
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | | || |||| || ||||| ||||||||||||| | ||||||||  ||||||||| ||||||||||| ||||||||    
T  148810 tgattcttgttcaattgatgttatggttgttaattgaagttgtggttgatgaatcattgcttgggtatgtatattcatgaattgatgatgagaatttgaa 148711  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||    
T  148710 ttgttgttggtgttttggtgaaa 148688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 23153545 - 23153403
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| |||||||| || | | || |||| |||||||| |||||||||||||   ||||||||||||||||||| ||| | |||||    
T  23153545 attgagttatgattcttgttcaattgatattatggctgttaattgatgttgtggttgatgaatcattacttgggtatacatattcatgaattaaggatga 23153446  T
Q  118 aaatttgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
     ||||||||||||||||||||||||||||||||||||||||||    
T  23153445 gaatttgaattgttgttggtgttttggtgaaatttgtgaattg 23153403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 1657909 - 1658040
Alignment:
Q  15 tgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatga 114  Q
    ||||||||| |||||||||||| || |||||||| ||| || |||| |||||||| ||||||||||||  | |||||||| |||||||||| || | |||    
T  1657909 tgaattgagttatgattcttgttcagttgatgttattgttgttaattgatgttgttgttgatgaatcactgcttgggtatgcatattcatgaataggtga 1658008  T
Q  115 tgaaaatttgaattgttgttggtgttttggtg 146  Q
    ||||||||||||||||||||||||||||||||    
T  1658009 tgaaaatttgaattgttgttggtgttttggtg 1658040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 35009624 - 35009735
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggt 137  Q
    ||||||||||||||| || |||| |||||||| ||||||||||||| | |||||||| |||||||||| ||||||||||| |||||||||| ||||||||    
T  35009624 caattgatgttgttgttgttaattgatgttgttgttgatgaatcattgcttgggtatgcatattcatgaattgatgatgagaatttgaattattgttggt 35009723  T
Q  138 gttttggtgaaa 149  Q
    ||||||||||||    
T  35009724 gttttggtgaaa 35009735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 27740941 - 27740808
Alignment:
Q  13 gttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgat 112  Q
    ||||||||||| |||||||| ||| |||||||||| |||| |  ||   |||||||| || |||||||||| |||||||||| |||||||||| ||||||    
T  27740941 gttgaattgagatatgattcatgttcaattgatgtggttgctattatctgatgttgttgtggatgaatcatggtttgggtatgcatattcatgaattgat 27740842  T
Q  113 gatgaaaatttgaattgttgttggtgttttggtg 146  Q
    ||||||||||||||||| ||||||||||||||||    
T  27740841 gatgaaaatttgaattggtgttggtgttttggtg 27740808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 14626292 - 14626407
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||  ||||||||||| | | || |||| |||||||||||||||||||||| | |||||||| |||||||||| |||||| |||| ||||||||    
T  14626292 tgattcttgctcaattgatgttatggttgttaattgatgttgtagttgatgaatcattgcttgggtatgcatattcatgaattgattatgagaatttgaa 14626391  T
Q  127 ttgttgttggtgtttt 142  Q
    ||||||||||||||||    
T  14626392 ttgttgttggtgtttt 14626407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 15862573 - 15862443
Alignment:
Q  15 tgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatga 114  Q
    ||||||||| |||||||||||| || || ||||| ||| || |||| |||||||| ||||||||||||  | |||||||| |||||||||| || | |||    
T  15862573 tgaattgagttatgattcttgttcattt-atgttattgctgataattgatgttgttgttgatgaatcactgcttgggtatgcatattcatgaataggtga 15862475  T
Q  115 tgaaaatttgaattgttgttggtgttttggtg 146  Q
    ||||||||||||||||||||||||||||||||    
T  15862474 tgaaaatttgaattgttgttggtgttttggtg 15862443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 1650267 - 1650382
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||  ||||||||||| ||| || || | |||||||| ||||||||||||  | |||||||| |||||||||| |||||| |||| ||||||||    
T  1650267 tgattcttgctcaattgatgttattgttgttatttgatgttgttgttgatgaatcactgcttgggtatgcatattcatgaattgattatgagaatttgaa 1650366  T
Q  127 ttgttgttggtgtttt 142  Q
    ||||||||||||||||    
T  1650367 ttgttgttggtgtttt 1650382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 25175607 - 25175531
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  25175607 ttgatgaataattgcttgggtatgcatattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 25175531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 18381821 - 18381975
Alignment:
Q  6 tgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attcat 104  Q
    |||||| ||||||||| | || || || ||| ||||||||||||||| ||||||  |||||||| |||||||| |||| | |||||||| ||| ||||||    
T  18381821 tgttgttgttgaattgtgataagagtcatgttcaattgatgttgttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcat 18381920  T
Q  105 ggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
    |  ||| |||||| ||  ||| |||||||||||| ||| |||||||| ||||||||    
T  18381921 gatttgttgatgagaa-atgagttgttgttggtggttttgtgaaattggtgaattg 18381975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 16825986 - 16826038
Alignment:
Q  96 catattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  16825986 catattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 16826038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 27654191 - 27654267
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||||| |||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||    
T  27654191 ttgatgaataattgcttgggtatgcatattcatggattaatgatgagaatttgaattg-tgtcggtgttttggtgaaa 27654267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 15889853 - 15889914
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    ||||||| |||||| ||||||| || ||||||||| ||| || |||||||||||||||||||    
T  15889853 gttgttgatgaattgtgatggaatgcatgattataagttgtggttgtggttgattgttgatg 15889914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 22585674 - 22585754
Alignment:
Q  156 aattgaagaaatatgataagttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||||||| ||||| | |||||||||||||| ||||| | || ||||||||| ||| || || | ||||||||||||||    
T  22585674 aattgaagaattatgacatgttgttgttgaattgtgatgcaatgcatgattataagttgtggttatagttgattgttgatg 22585754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 22590505 - 22590585
Alignment:
Q  156 aattgaagaaatatgataagttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||||||| ||||| | |||||||||||||| ||||| | || ||||||||| ||| || || | ||||||||||||||    
T  22590505 aattgaagaattatgacatgttgttgttgaattgtgatgcaatgcatgattataagttgtggttatagttgattgttgatg 22590585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 22361926 - 22362032
Alignment:
Q  29 attcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attcatggattgatgatgaaaatttgaat 127  Q
    |||| ||| ||||||||||||||| ||||||  ||| |||| |||||||| |||| | |||||| | ||| ||||||| ||||||||||| || |||| |    
T  22361926 attcatgttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataattcatgaattgatgatgagaa-ttgagt 22362024  T
Q  128 tgttgttg 135  Q
    ||||||||    
T  22362025 tgttgttg 22362032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 25640702 - 25640760
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttg 233  Q
    |||||||||||||| ||||||| || ||||||||| ||| |  ||||||||||||||||    
T  25640702 gttgttgttgaattttgatggaatgcatgattataagttgttgttgtggttgattgttg 25640760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 160
Target Start/End: Complemental strand, 32898774 - 32898745
Alignment:
Q  131 tgttggtgttttggtgaaatttgtgaattg 160  Q
    ||||||||||||||||||||||||||||||    
T  32898774 tgttggtgttttggtgaaatttgtgaattg 32898745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 15005034 - 15005114
Alignment:
Q  156 aattgaagaaatatgataagttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||| ||| ||||| | |||||||||||||| |||| || || ||||||||| ||| || |||| ||||||| ||||||    
T  15005034 aattgatgaattatgacatgttgttgttgaattgtgatagaatgaatgattataagttgtggttgtagttgattattgatg 15005114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 21623278 - 21623123
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attca 103  Q
    ||||||| ||||||||| | || || || ||| | ||||||||||||| ||||||  |||||||  ||| |||| |||| | |||||||| ||| |||||    
T  21623278 atgttgttgttgaattgtggtaagaatcatgttctattgatgttgttgttgctaagtgatgttgatgttaatgagtcatggcttgggtattcataattca 21623179  T
Q  104 tggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
    ||  |||  ||||||||  ||| |||||||||||  |||||| ||||| ||||||||    
T  21623178 tgatttgtggatgaaaa-atgagttgttgttggtagtttggtaaaattggtgaattg 21623123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 25367374 - 25367438
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgt 69  Q
    ||||||| ||||||||| | || ||||| ||| ||||||||||||||| ||||||  ||||||||    
T  25367374 atgttgttgttgaattgtgataagattcatgttcaattgatgttgttgttgctaagtgatgttgt 25367438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 33324770 - 33324690
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attcatggattgatgatga 117  Q
    ||||||||||||||  ||||||  |||||||| |||||||| |||| | |||||||| ||| ||||||| |||| ||||||    
T  33324770 caattgatgttgttattgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatgaattggtgatga 33324690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 35136182 - 35136262
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attcatggattgatgatga 117  Q
    ||||||||||||||  ||||||  |||||||| |||||||| |||| | |||||||| ||| ||||||| |||| ||||||    
T  35136182 caattgatgttgttattgctaagtgatgttgttgttgatgattcatggcttgggtattcataattcatgaattggtgatga 35136262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 20445788 - 20445646
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||| | |||||||||||  ||||||||||| | | || |||| |||||||||||||||||||||| | |||||||| ||||||||||     
T  20445788 gttgttgttgaattgtgttatgattcttgatcaattgatgttatggctgttaattgatgttgtagttgatgaatcattgcttgggtatgcatattcatga 20445689  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||| ||||| |||||||||||||||||||||||||||||||    
T  20445688 attgaggatgagaatttgaattgttgttggtgttttggtgaaa 20445646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 20531553 - 20531411
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||| | |||||||||||  ||||||||||| | | || |||| |||||||||||||||||||||| | |||||||| ||||||||||     
T  20531553 gttgttgttgaattgtgttatgattcttgatcaattgatgttatggctgttaattgatgttgtagttgatgaatcattgcttgggtatgcatattcatga 20531454  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||| ||||| |||||||||||||||||||||||||||||||    
T  20531453 attgaggatgagaatttgaattgttgttggtgttttggtgaaa 20531411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 20893798 - 20893933
Alignment:
Q  25 tatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttg 124  Q
    |||||||||||| ||||||||||| |   || |||| |||||||| ||||||||||||| |||||||||| |||||||||  ||||||||||| ||||||    
T  20893798 tatgattcttgttcaattgatgttatgactgttaattgatgttgtggttgatgaatcattgtttgggtatgcatattcataaattgatgatgagaatttg 20893897  T
Q  125 aattgttgttggtgttttggtgaaatttgtgaattg 160  Q
    |||||||||||||||||||  |||||||||||||||    
T  20893898 aattgttgttggtgttttgaagaaatttgtgaattg 20893933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 20913126 - 20913004
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | | || |||| ||| |||| |||||||||| || | |||||||| |||||||||| ||||||||||| ||||||||    
T  20913126 tgattcttgttcaattgatgttatggttgttaattgatcttgtggttgatgaataattgcttgggtatgcatattcatgaattgatgatgagaatttgaa 20913027  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||    
T  20913026 ttgttgttggtgttttggtgaaa 20913004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 41394311 - 41394191
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaa-tttga 125  Q
    |||||||||  ||||||||||| ||| || || | |||||||| ||||||||||||  | |||||||| ||||||||||||||||||||||||| |||||    
T  41394311 tgattcttgctcaattgatgttattgttgttatttgatgttgttgttgatgaatcactgattgggtatgcatattcatggattgatgatgaaaattttga 41394212  T
Q  126 attgttgttggtgttttggtg 146  Q
    |||||||||||||||||||||    
T  41394211 attgttgttggtgttttggtg 41394191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 2116343 - 2116228
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||  ||||||||||| | | || |||| |||||||||||||||||||||| | |||||||| |||||||||| |||||| |||| ||||||||    
T  2116343 tgattcttgctcaattgatgttatggttgttaattgatgttgtagttgatgaatcattgcttgggtatgcatattcatgaattgattatgagaatttgaa 2116244  T
Q  127 ttgttgttggtgtttt 142  Q
    ||||||||||||||||    
T  2116243 ttgttgttggtgtttt 2116228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 20931434 - 20931312
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | | || |||| |||||||| |||||||||| ||   |||||||| |||||||||| ||| ||||||| ||||||||    
T  20931434 tgattcttgttcaattgatgttatggttgttaattgatgttgtggttgatgaataatttcttgggtatgcatattcatgaattaatgatgagaatttgaa 20931335  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||    
T  20931334 ttgttgttggtgttttggtgaaa 20931312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 37844616 - 37844746
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| | | || |||| |||||||| |||||||| |||| | |||||||| |||||||||| ||||| |||||    
T  37844616 attgagttatgattcttgttcaattgatgttatggttgttaattgatgttgtggttgatgagtcattgcttgggtatgcatattcatgaattgaggatga 37844715  T
Q  118 aaatttgaattgttgttggtgttttggtgaaa 149  Q
     |||||||| |||||||||||||||| |||||    
T  37844716 gaatttgaa-tgttgttggtgttttgatgaaa 37844746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 22227898 - 22227777
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| |  ||| |||| |||||| |  ||||||||| || | |||||| | |||||||||||||||||||||||||||||||    
T  22227898 tgattcttgttcaattgatgttatgaatgttaattgatgttatgattgatgaataattgcttgggtttgcatattcatggattgatgatgaaaatttgaa 22227799  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  22227798 ttg-tgttggtgttttggtgaaa 22227777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 22232595 - 22232474
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| |  ||| |||| |||||| |  ||||||||| || | |||||| | |||||||||||||||||||||||||||||||    
T  22232595 tgattcttgttcaattgatgttatgaatgttaattgatgttatgattgatgaataattgcttgggtttgcatattcatggattgatgatgaaaatttgaa 22232496  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  22232495 ttg-tgttggtgttttggtgaaa 22232474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 51452602 - 51452530
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  51452602 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 51452530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 45051496 - 45051416
Alignment:
Q  62 gatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgtttt 142  Q
    |||||| | ||||||||||||  | |||||||| |||||||||| |||||| |||| ||||||||||||||||||||||||    
T  45051496 gatgttattgttgatgaatcactgcttgggtatgcatattcatgaattgattatgagaatttgaattgttgttggtgtttt 45051416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 5072611 - 5072672
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | |||||||||||||||||||||| |||| || ||| |||||||||||||||||||    
T  5072611 ttgggtttgcatattcatggattgatgatgagaattagagttg-tgttggtgttttggtgaaa 5072672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 18601341 - 18601402
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | |||||||||||||||||||||| |||| || ||| |||||||||||||||||||    
T  18601341 ttgggtttgcatattcatggattgatgatgagaattagagttg-tgttggtgttttggtgaaa 18601402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 159
Target Start/End: Complemental strand, 49967638 - 49967607
Alignment:
Q  128 tgttgttggtgttttggtgaaatttgtgaatt 159  Q
    ||||||||||||||||||||||||||||||||    
T  49967638 tgttgttggtgttttggtgaaatttgtgaatt 49967607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 20254389 - 20254308
Alignment:
Q  39 aattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaa 120  Q
    |||||||||||||| |||| | | ||||||| || | ||||| ||   ||||||||||||| | ||||||||||||||||||    
T  20254389 aattgatgttgttgttgctgagacatgttgttgtgggtgaattatgacttgggtatacataattatggattgatgatgaaaa 20254308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 22143531 - 22143611
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attcatggattgatgatga 117  Q
    ||||||||||||||| ||||||  ||| |||| |||||||| |||| | |||||||| ||| |||||||  ||||||||||    
T  22143531 caattgatgttgttgctgctaagtgatattgttgttgatgattcatggcttgggtattcataattcatgatttgatgatga 22143611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 48696 - 48565
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| | | |  |||| |||||||| ||||||||||||| | |||||||| |||||||||| |||||||||||    
T  48696 attgagttatgattcttgttcaattgatgttatggctattaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaattgatgatga 48597  T
Q  118 aaatttgaattgttgttggtgttttggtgaaa 149  Q
     |||||||||||||||||||||||||||||||    
T  48596 gaatttgaattgttgttggtgttttggtgaaa 48565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 36137 - 36065
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggt 145  Q
    ||||||||| || | |||||| | |||||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  36137 ttgatgaataattgcttgggtttgcatattcatggattgatgatgagaatttgaattg-tgttggtgttatggt 36065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 149
Target Start/End: Original strand, 37067 - 37209
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| |||| |||||| ||||| |||||| ||||||| ||| | | || |||| |||||||| ||||||||||||| | |||||||| ||||||||||     
T  37067 gttgtggttggattgagttatgaatcttgttcaattgacgttatggctgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatga 37166  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  37167 attgatgatgagaatttgaattgttgttggtgttttggtgaaa 37209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 128332 - 128464
Alignment:
Q  17 aattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatg 116  Q
    ||||||| | |||||||||| ||||||||||| | |||| |||| ||||||||  ||||||||| || | |||||||| |||||||||| ||||||||||    
T  128332 aattgagatttgattcttgttcaattgatgttatggatgttaatggatgttgtgattgatgaataattgattgggtatgcatattcatgaattgatgatg 128431  T
Q  117 aaaatttgaattgttgttggtgttttggtgaaa 149  Q
    | |||||||||||||||||||||||||||||||    
T  128432 agaatttgaattgttgttggtgttttggtgaaa 128464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 31884 - 31942
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgt 130  Q
    ||||||||| || | |||||| | |||||||||||||| ||||||| ||||||||||||    
T  31884 ttgatgaataattgcttgggtttgcatattcatggattaatgatgagaatttgaattgt 31942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 22678 - 22650
Alignment:
Q  128 tgttgttggtgttttggtgaaatttgtga 156  Q
    |||||||||||||||||||||||||||||    
T  22678 tgttgttggtgttttggtgaaatttgtga 22650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 123336 - 123460
Alignment:
Q  25 tatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttg 124  Q
    |||||||||||| ||||||||||| | | || |||| |||||||| |||||||||| || | |||||||| |||||||||| ||||| ||||| ||||||    
T  123336 tatgattcttgttcaattgatgttatggttgttaattgatgttgtggttgatgaataatggcttgggtatgcatattcatgaattgaagatgagaatttg 123435  T
Q  125 aattgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||||    
T  123436 aattgttgttggtgttttggtgaaa 123460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 255074 - 255106
Alignment:
Q  128 tgttgttggtgttttggtgaaatttgtgaattg 160  Q
    ||||||||||||||| |||||||||||||||||    
T  255074 tgttgttggtgttttcgtgaaatttgtgaattg 255106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 261680 - 261712
Alignment:
Q  128 tgttgttggtgttttggtgaaatttgtgaattg 160  Q
    ||||||||||||||| |||||||||||||||||    
T  261680 tgttgttggtgttttcgtgaaatttgtgaattg 261712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 41827 - 41686
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||| | | | || |||| | |||||||| ||||||||||| | |||||||| |||||||||| |||||| || |    
T  41827 attgagttatgattcttgttcaattgatgctatggctgttaattgttgttgtagatgatgaatcattggttgggtatgcatattcatgaattgattatta 41728  T
Q  118 aaatttgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
     ||||||||||||||||||||||||||||||| ||||||||||    
T  41727 gaatttgaattgttgttggtgttttggtgaaa-ttgtgaattg 41686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 107836 - 107715
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | |||| |||| ||||||||  ||||||||| || | |||||| | |||||||||||||||||||||||||||||||    
T  107836 tgattcttgttcaattgatgttatggatgttaattgatgttgtgattgatgaataattgcttgggtttgcatattcatggattgatgatgaaaatttgaa 107737  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  107736 ttg-tgttggtgttttggtgaaa 107715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 64751 - 64812
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | ||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  64751 ttgggtttgcatattcatggattgttgatgagaatttgagttg-tgttggtgttttggtgaaa 64812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 41726 - 41622
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggt 137  Q
    ||||||||||||||| || |||  |||||||| ||||||||||||| | |||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  41726 caattgatgttgttgttgttaaatgatgttgttgttgatgaatcattgcttgggtatgcatattcatgaattgatgatgagaatttgaattgttgttggt 41627  T
Q  138 gtttt 142  Q
    |||||    
T  41626 gtttt 41622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 247607 - 247738
Alignment:
Q  18 attgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatga 117  Q
    |||||| |||||||||||| ||||||||||| |   || |||| |||||||| ||||||||||||| | |||||||| |||||||||| | ||| |||||    
T  247607 attgagttatgattcttgttcaattgatgttatgactgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatgaactgaggatga 247706  T
Q  118 aaatttgaattgttgttggtgttttggtgaaa 149  Q
     ||||||||| |||||||||||||||||||||    
T  247707 gaatttgaatggttgttggtgttttggtgaaa 247738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 706 - 828
Alignment:
Q  25 tatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttg 124  Q
    ||||||||||||  |||||||||| | | ||||||| |||||||| ||||||||||||| | |||||||| |||||||| | ||||| ||||| ||||||    
T  706 tatgattcttgtttaattgatgttatggctgctaattgatgttgtggttgatgaatcattgcttgggtatgcatattcaggaattgaggatgagaatttg 805  T
Q  125 aattgttgttggtgttttggtga 147  Q
    ||| |||||||||||||||||||    
T  806 aatggttgttggtgttttggtga 828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 8967 - 8846
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | |||| |||| ||||||||  ||||||||| || | |||||||| |||||||||| ||||||||||| ||||||||    
T  8967 tgattcttgttcaattgatgttatggatgttaattgatgttgtgattgatgaataattgcttgggtatgcatattcatgtattgatgatgagaatttgaa 8868  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  8867 ttg-tgttggtgttttggtgaaa 8846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 1213 - 1091
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | | || |||| ||| |||| |||||||||| || | |||||| | |||||||||| ||||||||||| ||||||||    
T  1213 tgattcttgttcaattgatgttatggttgttaattgatattgtggttgatgaataattgcttgggtgtgcatattcatgaattgatgatgagaatttgaa 1114  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||    
T  1113 ttgttgttggtgttttggtgaaa 1091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 3756 - 3877
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | |||| |||| ||||||||  |||| |||| || | |||||||| |||||| |||||||||||| || | ||||||    
T  3756 tgattcttgttcaattgatgttatggatgttaattgatgttgtgattgaggaataattgcttgggtatgcatattgatggattgatgaggagagtttgaa 3855  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  3856 ttg-tgttggtgttttggtgaaa 3877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 48276 - 48155
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| | |||| |||| ||||||||  ||||||||| || |  ||||||| |||||||||||||||||||||| ||||||||    
T  48276 tgattcttgttcaattgatgttatagatgttaattgatgttgtgattgatgaataattgcctgggtatgcatattcatggattgatgatgagaatttgaa 48177  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  48176 ttg-tgttggtgttttggtgaaa 48155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 34614 - 34755
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgc-aattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatg 105  Q
    ||||| ||||||||||| |||||||| |||   |||||||||| ||| || || | |||||||| ||||||||||||    |||||||| ||||||||||    
T  34614 gttgttgttgaattgagatatgattcatgttttaattgatgttattgttgttatttgatgttgttgttgatgaatcactacttgggtatgcatattcatg 34713  T
Q  106 gattgatgatgaaaa-tttgaattgttgttggtgttttggtg 146  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  34714 gattgatgatgaaaattttgaattgttgttggtgttttggtg 34755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 4890 - 4817
Alignment:
Q  177 tgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    |||||||||| ||||||||| || ||||||||| ||| || |||||||| ||||||||||   |||||||||||    
T  4890 tgttgttgaaatatgatggaatgcatgattataagttgtggttgtggttaattgttgatgataatctcattgca 4817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 9511 - 9626
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||  ||| ||||||| | | || |||| |||||||||||||||||||||| | |||||||| |||||||||| |||||| |||| ||||||||    
T  9511 tgattcttgctcaaatgatgttatggttgttaattgatgttgtagttgatgaatcattgcttgggtatgcatattcatgaattgattatgagaatttgaa 9610  T
Q  127 ttgttgttggtgtttt 142  Q
    ||||||||||||||||    
T  9611 ttgttgttggtgtttt 9626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 16409 - 16524
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||  ||| ||||||| | | || |||| |||||||||||||||||||||| | |||||||| |||||||||| |||||| |||| ||||||||    
T  16409 tgattcttgctcaaatgatgttatggttgttaattgatgttgtagttgatgaatcattgcttgggtatgcatattcatgaattgattatgagaatttgaa 16508  T
Q  127 ttgttgttggtgtttt 142  Q
    ||||||||||||||||    
T  16509 ttgttgttggtgtttt 16524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 5228 - 5356
Alignment:
Q  20 tgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaa 119  Q
    |||| |||||||||||| ||||||||||| | | || |||| ||||||||  |||||||||||| | |||||||| |||||||||| ||||| ||||| |    
T  5228 tgagttatgattcttgttcaattgatgttatggctgttaattgatgttgtgattgatgaatcattgcttgggtatgcatattcatgaattgaggatgaga 5327  T
Q  120 atttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||| |||||||||||||||| |||||    
T  5328 atttgaa-tgttgttggtgttttgatgaaa 5356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 6227 - 6358
Alignment:
Q  17 aattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatg 116  Q
    ||||||| | |||||||||| ||| ||||||| | |||| ||||   |||| |  ||||||||| || | |||||||| |||||||||||||||||||||    
T  6227 aattgagatttgattcttgttcaagtgatgttatggatgttaatttttgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatg 6326  T
Q  117 aaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||||||| |||||||||||||||||||    
T  6327 aaaatttgaattg-tgttggtgttttggtgaaa 6358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 1131 - 1250
Alignment:
Q  29 attcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaatt 128  Q
    |||||||| ||| ||||||| | |||| ||||  ||||| |  ||||||||| || | |||||||| |||||||||||||||||||||||||||||||||    
T  1131 attcttgttcaagtgatgttatggatgttaatttatgttatgattgatgaataattgcttgggtatgcatattcatggattgatgatgaaaatttgaatt 1230  T
Q  129 gttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||    
T  1231 gtt-ttggtgttttggtgaaa 1250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 8362 - 8466
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggt 137  Q
    ||||||||||||||| || |||| |||||||| ||| ||||||||| | |||||||| ||||| |||| ||||||||||| |||||||||||||| ||||    
T  8362 caattgatgttgttgttgttaattgatgttgttgtttatgaatcatggcttgggtatgcatatacatgaattgatgatgagaatttgaattgttgctggt 8461  T
Q  138 gtttt 142  Q
    |||||    
T  8462 gtttt 8466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 26582 - 26710
Alignment:
Q  20 tgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaa 119  Q
    |||| |||||||||||| ||||||||||| | | || |||| ||||||||  |||||||||||| | |||||||| |||||| ||| ||||| ||||| |    
T  26582 tgagttatgattcttgttcaattgatgttatggctgttaattgatgttgtgattgatgaatcattgcttgggtatgcatattgatgaattgaggatgaga 26681  T
Q  120 atttgaattgttgttggtgttttggtgaaa 149  Q
    ||||| | |||||||||||||||| |||||    
T  26682 atttg-agtgttgttggtgttttgatgaaa 26710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 48603 - 48482
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| || |||||||| | |||| |||| |||||| |  ||||||||| || | |||||| | |||||||||||||||||||||||||||||||    
T  48603 tgattcttgttcacttgatgttatggatgttaattgatgttatgattgatgaataattgcttgggtttgcatattcatggattgatgatgaaaatttgaa 48504  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| ||||||||||||| |||||    
T  48503 ttg-tgttggtgttttgatgaaa 48482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 5378 - 5498
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| |  ||| |||| ||||||||  || |||||| || | |||||| | |||||||||||||||||||||||||||||||    
T  5378 tgattcttgttcaattgatgttatgaatgttaattgatgttgtgattaatgaataattgcttgggt-tgcatattcatggattgatgatgaaaatttgaa 5476  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| |||||||||||||||||||    
T  5477 ttg-tgttggtgttttggtgaaa 5498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 3072 - 2936
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgc-aattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatg 105  Q
    ||||| ||||||||||| |||||||| |||   |||||||||| ||| || || | |||||||| ||||||||||||  | ||| |||| ||||||||||    
T  3072 gttgttgttgaattgagatatgattcatgttttaattgatgttattgttgttatttgatgttgttgttgatgaatcactgcttgtgtatgcatattcatg 2973  T
Q  106 gattgatgatgaaaatttgaattgttgttggtgtttt 142  Q
     |||||| |||| ||||||||||||||||||||||||    
T  2972 aattgattatgagaatttgaattgttgttggtgtttt 2936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 12214 - 12083
Alignment:
Q  17 aattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatg 116  Q
    ||||||| | |||||||||| ||||||||||| |  ||| |||| |||||| |  || |||||| || | |||||||| |||||||||||||||||||||    
T  12214 aattgagatttgattcttgttcaattgatgttatgaatgttaattgatgttatgattcatgaataattgcttgggtatgcatattcatggattgatgatg 12115  T
Q  117 aaaatttgaattgttgttggtgttttggtgaaa 149  Q
    | ||||||||||| |||||||||||| ||||||    
T  12114 agaatttgaattg-tgttggtgttttagtgaaa 12083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 22650 - 22578
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  22650 gttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 22578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 26905 - 26833
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  26905 gttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 26833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 13584 - 13480
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggt 137  Q
    ||||||||||||||| || |||| |||||||| |||||||||||||   |||||||| |||||||||| ||||| ||||| |||||||||| |||| |||    
T  13584 caattgatgttgttgttgttaattgatgttgttgttgatgaatcatgacttgggtatgcatattcatgaattgacgatgagaatttgaatttttgtaggt 13485  T
Q  138 gtttt 142  Q
    |||||    
T  13484 gtttt 13480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 1735 - 1807
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcatt 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||    
T  1735 gttgttgttgaattatgatggagggtatgattatatgttatgattgtagttgattgatgatgttgatctcatt 1807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 26 - 147
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||| |||| || |  ||| |||| |||||| |  ||||||||| || | |||||| | |||||||||||||||||||||||||||||||    
T  26 tgattcttgttcaaatgatattatgaatgttaattgatgttatgattgatgaataattgcttgggtttgcatattcatggattgatgatgaaaatttgaa 125  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||||| |||||||||||||||||    
T  126 ttgtt-ttggtgttttggtgaaa 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 3811 - 3690
Alignment:
Q  27 tgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaa 126  Q
    |||||||||| ||||||||||| |  ||| |||| |||||| |  ||||||||| ||   |||||| | |||||||||||||||||||||||||||||||    
T  3811 tgattcttgttcaattgatgttatgaatgttaattgatgttatgattgatgaataattacttgggtttgcatattcatggattgatgatgaaaatttgaa 3712  T
Q  127 ttgttgttggtgttttggtgaaa 149  Q
    ||| ||||| |||||||||||||    
T  3711 ttg-tgttgatgttttggtgaaa 3690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 272134 - 271900
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| |||| |||||| |||||||||||| |||||| |||| | | || |||| |||||||| ||||||||||||| | |||||||| ||||||||||     
T  272134 gttgtggttggattgagttatgattcttgttcaattggtgttatagctgttaattgatgttgtggttgatgaatcattgcttgggtatgcatattcatga 272035  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataagttgttgttgaattatgatggagtgtatgatt 206  Q
    |||| | ||  | |  || ||||||||||||| ||| |||||||| ||||||| |||| ||       || ||||||||| ||||||||| || |||||     
T  272034 attg-ttatagagaaatggattgttgttggtggttttgtgaaattagtgaatt-aagacat-------gtagttgttgaaatatgatggaatgcatgatc 271944  T
Q  207 atatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    ||| ||| || |||||||| ||||||||||   |||||||||||    
T  271943 ataagttgtggttgtggttaattgttgatgataatctcattgca 271900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 172014 - 171780
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| || ||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | || ||||| ||||||||||     
T  172014 gttgtggttgaattgagttacgattcttgttcaattgatgttatggctgttaattgatgttgtggttgatgaatcattgcttaggtatgcatattcatga 171915  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataagttgttgttgaattatgatggagtgtatgatt 206  Q
     ||| || | || |  || ||||||||||||| ||| |||||||| ||||||        ||  | | |||||||||||| ||||||||| || |||||     
T  171914 tttgttg-ttaagaaatggattgttgttggtggttttgtgaaattggtgaat--------tacaacatgttgttgttgaaatatgatggaatgcatgatc 171824  T
Q  207 atatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    ||| ||| || |||||||| ||||||||||   |||||||||||    
T  171823 ataagttgtggttgtggttaattgttgatgataatctcattgca 171780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 177717 - 177483
Alignment:
Q  7 gttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatgg 106  Q
    ||||| ||||||||||| || ||||||||| ||||||||||| | | || |||| |||||||| ||||||||||||| | || ||||| ||||||||||     
T  177717 gttgtggttgaattgagttacgattcttgttcaattgatgttatggctgttaattgatgttgtggttgatgaatcattgcttaggtatgcatattcatga 177618  T
Q  107 attgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattgaagaaatatgataagttgttgttgaattatgatggagtgtatgatt 206  Q
     ||| || | || |  || ||||||||||||| ||| |||||||| ||||||        ||  | | |||||||||||| ||||||||| || |||||     
T  177617 tttgttg-ttaagaaatggattgttgttggtggttttgtgaaattggtgaat--------tacaacatgttgttgttgaaatatgatggaatgcatgatc 177527  T
Q  207 atatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    ||| ||| || |||||||| ||||||||||   |||||||||||    
T  177526 ataagttgtggttgtggttaattgttgatgataatctcattgca 177483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 70882 - 70914
Alignment:
Q  128 tgttgttggtgttttggtgaaatttgtgaattg 160  Q
    |||||||||||||||||||||||||||||||||    
T  70882 tgttgttggtgttttggtgaaatttgtgaattg 70914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 14292 - 14344
Alignment:
Q  96 catattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14292 catattcatggattgatgatgaaaatttgaattg-tgttggtgttttggtgaaa 14344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 21279 - 21399
Alignment:
Q  28 gattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaat 127  Q
    ||||||||| ||||||||||| |  ||| || | |||||| |  ||||||||| || | ||| || | |||||||||||||| ||||||||||||||||     
T  21279 gattcttgttcaattgatgttatgaatgttatttgatgttatgattgatgaataattgcttgagtttgcatattcatggattaatgatgaaaatttgaac 21378  T
Q  128 tgttgttggtgttttggtgaaa 149  Q
    || |||||||||||||||||||    
T  21379 tg-tgttggtgttttggtgaaa 21399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 3262 - 3183
Alignment:
Q  62 gatgttgtagttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttt 141  Q
    ||||||||  |||||||||||| |||||||||  |||||||||| |||||||| || |||| ||||||||||||||||||    
T  3262 gatgttgtgattgatgaatcattgtttgggtaggcatattcatgaattgatgaagagaattggaattgttgttggtgttt 3183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 1867 - 1815
Alignment:
Q  96 catattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  1867 catattcatggattgatgatgagaatttgaattg-tgttggtgttttggtgaaa 1815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 43041 - 42965
Alignment:
Q  72 ttgatgaatcatcgtttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    ||||||||| || | |||||| | |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  43041 ttgatgaataattgcttgggtttgcatattcatggattgatgatgagaatttaaattg-tgttggtgttttggtgaaa 42965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 54527 - 54415
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacatattcat 104  Q
    ||||||| |||||| |||| | |||||| ||| | ||||||||||||| |  |||  |||||||| || | ||||||||   ||||||||||||||| ||    
T  54527 atgttgttgttgaaatgagatgtgattcatgttccattgatgttgttgctattaactgatgttgttgtgggtgaatcatgagttgggtatacatatttat 54428  T
Q  105 ggattgatgatga 117  Q
    |||||||||||||    
T  54427 ggattgatgatga 54415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 76984 - 77139
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attca 103  Q
    ||||||| ||||||||| | |  ||||| ||| ||||||||||||||| ||||||  ||| ||||  ||||||| |||| | |||||||| ||| |||||    
T  76984 atgttgttgttgaattgtggtgagattcatgttcaattgatgttgttgttgctaagtgatattgttattgatgattcatggcttgggtattcataattca 77083  T
Q  104 tggattgatgatgaaaatttgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
    ||  ||| |||||| ||  ||| |||||||||||| ||| |||||||| ||||||||    
T  77084 tgatttgttgatgagaa-atgagttgttgttggtggttttgtgaaattggtgaattg 77139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 1028 - 1089
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||||||||| ||||||||| || ||||||||| ||| || |||||||| ||||||||||    
T  1028 gttgttgttgaaatatgatggaatgcatgattataagttgtggttgtggttaattgttgatg 1089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 45815 - 45876
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||||||||| ||||||||| || ||||||||| ||| || |||||||| ||||||||||    
T  45815 gttgttgttgaaatatgatggaatgcatgattataagttgtggttgtggttaattgttgatg 45876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 132505 - 132542
Alignment:
Q  123 tgaattgttgttggtgttttggtgaaatttgtgaattg 160  Q
    |||| |||||||||||||||||||||||||||||||||    
T  132505 tgaaatgttgttggtgttttggtgaaatttgtgaattg 132542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 197390 - 197525
Alignment:
Q  5 atgttgtagttgaattgagctatgattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attca 103  Q
    ||||||| ||||||||| | |  ||||| ||| ||||||||||||||| ||||||  ||| |||| |||||||| |||| |||||||| | ||| | |||    
T  197390 atgttgttgttgaattgtgatgagattcatgttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatggtttgggtcttcataaatca 197489  T
Q  104 tggattgatgatgaaaatttgaattgttgttggtgtt 140  Q
    ||  |||||||||| || |||| ||||||||| ||||    
T  197490 tgctttgatgatgagaa-ttgagttgttgttgttgtt 197525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 1347 - 1272
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    |||||||||||| ||||||||| || ||||| ||| ||| || |||||||| ||||||||||   |||||||||||    
T  1347 gttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgataatctcattgca 1272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 12007 - 12082
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    |||||||||||| ||||||||| || ||||||||| ||| || ||||| || ||||||||||   |||||||||||    
T  12007 gttgttgttgaaatatgatggaatgcatgattataagttgtggttgtgtttaattgttgatgataatctcattgca 12082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 24496 - 24571
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatgtccatctcattgca 250  Q
    |||||||||||| ||||||||| || ||||| ||| ||| || |||||||| ||||||||||   |||||||||||    
T  24496 gttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatgataatctcattgca 24571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 104793 - 104872
Alignment:
Q  39 aattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attcatggattgatgatga 117  Q
    |||||||||||||| ||||||  ||| |||| |||||||| |||| | |||||||| ||| ||||||| |||||||||||    
T  104793 aattgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtattcataattcatgaattgatgatga 104872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 10739 - 10642
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attcatggattgatgatgaaaatttgaattgttgttg 135  Q
    ||||||||||||||  ||||||  |||||||| |||||| | |||| | |||||| | ||| ||||||| ||||||||||||||  |||||||||||||    
T  10739 caattgatgttgtttttgctaagtgatgttgttgttgatcattcatggcttgggtgttcataattcatgaattgatgatgaaaa-atgaattgttgttg 10642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 64 - 3
Alignment:
Q  87 ttgggtatacatattcatggattgatgatgaaaatttgaattgttgttggtgttttggtgaaa 149  Q
    |||||| | |||||||||| |||| |||||| ||||||| |||| ||||||||||||||||||    
T  64 ttgggtttgcatattcatgaattgttgatgagaatttgagttgt-gttggtgttttggtgaaa 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 2532 - 2471
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacata 99  Q
    ||||||||||||||| ||||||  |||||||| |||||||| |||| | |||||||| ||||    
T  2532 caattgatgttgttgttgctaagtgatgttgttgttgatgattcatggcttgggtattcata 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 160
Target Start/End: Complemental strand, 7551 - 7522
Alignment:
Q  131 tgttggtgttttggtgaaatttgtgaattg 160  Q
    ||||||||||||||||||||||||||||||    
T  7551 tgttggtgttttggtgaaatttgtgaattg 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 3467 - 3406
Alignment:
Q  175 gttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgttgatg 236  Q
    |||||||||||| ||||||||| || ||||| ||| ||| || |||||||| ||||||||||    
T  3467 gttgttgttgaaatatgatggaatgcatgatcataagttgtggttgtggttaattgttgatg 3406  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 160
Target Start/End: Complemental strand, 38282 - 38253
Alignment:
Q  131 tgttggtgttttggtgaaatttgtgaattg 160  Q
    ||||||||||||||||||||||||||||||    
T  38282 tgttggtgttttggtgaaatttgtgaattg 38253  T

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Target: scaffold0700 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 2612 - 2548
Alignment:
Q  28 gattcttgtgcaattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggt 92  Q
    ||||| ||| ||||||||||||||| ||||||  ||| |||| |||||||| |||| ||||||||    
T  2612 gattcatgttcaattgatgttgttgttgctaagtgatattgttgttgatgattcatggtttgggt 2548  T

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Target: scaffold0507 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 1629 - 1705
Alignment:
Q  156 aattgaagaaatatgataagttgttgttgaattatgatggagtgtatgattatatgttatgattgtggttgattgtt 232  Q
    |||||| ||| ||||| | |||||||||||| ||||||||| || ||||||||| ||| || ||||| || ||||||    
T  1629 aattgatgaattatgacatgttgttgttgaaatatgatggaatgcatgattataagttgtggttgtgattaattgtt 1705  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 8087 - 8007
Alignment:
Q  38 caattgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacat-attcatggattgatgatga 117  Q
    ||||||||||||||| |||||   |||||||| |||||||| |||| | |||||||| ||| ||||||| |||| ||||||    
T  8087 caattgatgttgttgttgctatgtgatgttgttgttgatgattcatagcttgggtattcataattcatgaattggtgatga 8007  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 161
Target Start/End: Original strand, 116687 - 116806
Alignment:
Q  42 tgatgttgttgatgctaatagatgttgtagttgatgaatcatcgtttgggtatacata-ttcatggattgatgatgaaaatttgaattgttgttggtgtt 140  Q
    ||||||||||| ||||||  ||| |||| |||||||| |||| | |||||| | |||| ||||||  ||| ||||||||| | || |||||||||||| |    
T  116687 tgatgttgttgttgctaagtgatattgttgttgatgattcatggcttgggtgttcataattcatgatttgttgatgaaaaatgga-ttgttgttggtggt 116785  T
Q  141 ttggtgaaatttgtgaattga 161  Q
    || || ||||| |||||||||    
T  116786 tttgtaaaattggtgaattga 116806  T

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