View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9771_high_14 (Length: 259)
Name: NF9771_high_14
Description: NF9771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9771_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 42249277 - 42249034
Alignment:
| Q |
1 |
atatttgtcactctatctatagattaaaatcgaagaaaaagaaatcatgtcaatctggatggatgttggctattgattctgaaaaattctgtctttttat |
100 |
Q |
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| T |
42249277 |
atatttgtcactctatctatagattaaaatcgaagaaaaagaaatcatgtcaatctggatggatgttggctattgattctgaaaaattctgtctttttat |
42249178 |
T |
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| Q |
101 |
gtttttggaatctgttcttgattgtgtttttaatttttgaaaaggatagtgtgagatcgcaggccgtcagaatgttcctgttgcagagggaagcaccgag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42249177 |
gtttttggaatctgttcttgattgtgtttttaatttttgaaaaggatagtgtgagatcgcaggccgtcagaatgttcctgttgcagagggaagcaccgag |
42249078 |
T |
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| Q |
201 |
ccattgaaggtatctacttttgacttttgaacttctctgatgtc |
244 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
42249077 |
ccattgaaggtatctacttttgacttttgaacttctctggtgtc |
42249034 |
T |
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