View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9771_high_9 (Length: 294)
Name: NF9771_high_9
Description: NF9771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9771_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 6 - 277
Target Start/End: Complemental strand, 2760931 - 2760660
Alignment:
| Q |
6 |
gtttggtgttaggatattgggatcgagtttgattggtttggtttggacacacatggagaaaaatgaatcaatttattagtggtcattgatttggtgctta |
105 |
Q |
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| T |
2760931 |
gtttggtgttaggatattgggatcgagtttgattggtttggtttggacacacatggagaaaaatgaatcaatttattagtggtcattgatttggtgctta |
2760832 |
T |
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| Q |
106 |
aactcttaaacgctattacgtacattttcatgtaattatgtatagtataattaactaagttgatttgaacatagttcgagagtggattcgacaattagtt |
205 |
Q |
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| T |
2760831 |
aactcttaaacgctattacgtacattttcatgtaattatgtataatataattaactaagttgatttgaacatagttcgagagtggattcgacaattagtt |
2760732 |
T |
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| Q |
206 |
tgttcgaacttcgttcatgcatcaaatgagatgattttgagacaaaaattaagttcgttaactaaagaaatt |
277 |
Q |
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| T |
2760731 |
tgttcgaacttcgttcatgcatcaaatgagatgattttgagacaaaaattaagttcgttaactaaagaaatt |
2760660 |
T |
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