View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9771_low_23 (Length: 352)
Name: NF9771_low_23
Description: NF9771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9771_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 14 - 279
Target Start/End: Original strand, 45403281 - 45403546
Alignment:
| Q |
14 |
gtttcttcttctgatgatgaagaatctctttgaagactaaacatgagttctctaggagaaataatgctgttattaatttctagccctaggttttgaaaaa |
113 |
Q |
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| T |
45403281 |
gtttcttcttctgatgatgaagaatctctttgaagactaaacatgagttctctaggagaaataatgctgttattaatttctagccctaggttttgaaaaa |
45403380 |
T |
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| Q |
114 |
taggttttgtggcgatgtttaaaggagaacgatattttcgtgaagttgttgatcttgattccttaaacgcgttccaatcttgttctagtttcttgtattt |
213 |
Q |
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| T |
45403381 |
taggttttgtggcgatgtttaaaggggaacgatattttcgtgaagttgttgatcttgattccttaaacgcgttccaatcttgttctagtttcttgtattt |
45403480 |
T |
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| Q |
214 |
ctgatgaagttctcttgtttgtgttcctttttctttgaagcttttcacggtggagtgtggggtcga |
279 |
Q |
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| T |
45403481 |
ctgatgaagttctcttgttcgtgttcctttttctttgaagcttttcacggtggagtgtggggtcga |
45403546 |
T |
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