View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9771_low_3 (Length: 635)

Name: NF9771_low_3
Description: NF9771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9771_low_3
NF9771_low_3
[»] chr5 (43 HSPs)
chr5 (301-620)||(32021088-32021404)
chr5 (1-297)||(32021943-32022239)
chr5 (72-227)||(16457952-16458106)
chr5 (72-206)||(16937856-16937990)
chr5 (115-227)||(29925783-29925895)
chr5 (72-224)||(10639898-10640050)
chr5 (117-236)||(1465038-1465156)
chr5 (167-258)||(5377268-5377359)
chr5 (101-223)||(25461038-25461159)
chr5 (111-225)||(35445999-35446113)
chr5 (99-215)||(32009646-32009763)
chr5 (89-236)||(39105397-39105544)
chr5 (89-155)||(12857695-12857761)
chr5 (101-227)||(25461649-25461774)
chr5 (173-238)||(37112332-37112397)
chr5 (89-169)||(3735148-3735228)
chr5 (117-224)||(7674593-7674700)
chr5 (72-167)||(7705971-7706066)
chr5 (89-224)||(9202738-9202873)
chr5 (176-272)||(42500302-42500408)
chr5 (106-236)||(4014431-4014561)
chr5 (89-131)||(12857328-12857370)
chr5 (152-206)||(34102367-34102421)
chr5 (99-169)||(39477883-39477953)
chr5 (172-225)||(3932758-3932811)
chr5 (101-194)||(12554494-12554586)
chr5 (179-236)||(34112808-34112865)
chr5 (102-225)||(24030404-24030528)
chr5 (165-236)||(41981774-41981846)
chr5 (174-225)||(3735566-3735617)
chr5 (106-185)||(6587114-6587193)
chr5 (165-224)||(14932235-14932293)
chr5 (164-231)||(34736592-34736658)
chr5 (167-210)||(36797156-36797199)
chr5 (104-215)||(40426719-40426830)
chr5 (165-236)||(42569046-42569117)
chr5 (89-167)||(9107092-9107170)
chr5 (109-234)||(6593235-6593359)
chr5 (111-160)||(10363760-10363809)
chr5 (227-272)||(24030556-24030601)
chr5 (227-272)||(42100200-42100245)
chr5 (104-215)||(13697764-13697875)
chr5 (188-236)||(40590460-40590508)
[»] chr7 (57 HSPs)
chr7 (415-576)||(11788669-11788845)
chr7 (464-576)||(9105909-9106021)
chr7 (99-224)||(38138479-38138604)
chr7 (89-225)||(30570921-30571057)
chr7 (89-180)||(27863715-27863806)
chr7 (89-227)||(19302553-19302687)
chr7 (111-227)||(420302-420418)
chr7 (112-256)||(39907716-39907860)
chr7 (94-206)||(45790421-45790532)
chr7 (94-212)||(28341052-28341169)
chr7 (104-225)||(48469988-48470109)
chr7 (97-225)||(40252105-40252233)
chr7 (340-411)||(11788881-11788952)
chr7 (112-215)||(20269530-20269633)
chr7 (117-212)||(20881654-20881749)
chr7 (116-227)||(31744251-31744362)
chr7 (94-185)||(34744012-34744103)
chr7 (331-405)||(9106125-9106199)
chr7 (111-205)||(22283756-22283850)
chr7 (89-215)||(45264049-45264175)
chr7 (110-195)||(46280283-46280368)
chr7 (125-225)||(119854-119954)
chr7 (89-201)||(33601400-33601511)
chr7 (119-225)||(4970813-4970914)
chr7 (165-215)||(34464279-34464329)
chr7 (102-184)||(49019853-49019935)
chr7 (136-212)||(8960664-8960740)
chr7 (112-215)||(20258466-20258569)
chr7 (117-211)||(33678738-33678832)
chr7 (115-212)||(44216786-44216888)
chr7 (116-212)||(48507678-48507776)
chr7 (111-212)||(20526403-20526504)
chr7 (173-230)||(28613608-28613665)
chr7 (94-227)||(45338391-45338523)
chr7 (111-155)||(33128767-33128811)
chr7 (89-181)||(39629947-39630039)
chr7 (123-195)||(43694594-43694666)
chr7 (89-180)||(11619148-11619239)
chr7 (165-212)||(34083591-34083638)
chr7 (116-236)||(37064481-37064603)
chr7 (172-227)||(45004708-45004763)
chr7 (99-141)||(3928010-3928052)
chr7 (145-215)||(20234437-20234507)
chr7 (94-144)||(27566689-27566739)
chr7 (165-211)||(30180009-30180055)
chr7 (101-212)||(34714124-34714237)
chr7 (181-227)||(45806408-45806454)
chr7 (115-160)||(9050644-9050689)
chr7 (89-190)||(19022575-19022676)
chr7 (100-141)||(28614461-28614502)
chr7 (89-190)||(33602017-33602117)
chr7 (227-272)||(38500072-38500117)
chr7 (106-211)||(39967878-39967983)
chr7 (172-225)||(46078091-46078144)
chr7 (89-141)||(38499903-38499955)
chr7 (165-225)||(39279707-39279767)
chr7 (111-195)||(40377864-40377948)
[»] chr4 (53 HSPs)
chr4 (466-576)||(45092349-45092461)
chr4 (466-576)||(21781415-21781527)
chr4 (466-576)||(24376095-24376207)
chr4 (335-411)||(24375919-24375995)
chr4 (335-405)||(45092173-45092243)
chr4 (89-227)||(55414410-55414548)
chr4 (89-272)||(2243948-2244131)
chr4 (335-411)||(21781239-21781315)
chr4 (100-227)||(54069418-54069545)
chr4 (105-227)||(20108951-20109073)
chr4 (74-227)||(41336703-41336855)
chr4 (89-185)||(7839351-7839447)
chr4 (99-212)||(23319799-23319914)
chr4 (99-222)||(50681089-50681212)
chr4 (104-195)||(53294119-53294210)
chr4 (117-229)||(3155543-3155655)
chr4 (135-236)||(7601692-7601793)
chr4 (117-274)||(27043848-27044005)
chr4 (138-227)||(31076425-31076514)
chr4 (99-235)||(50662738-50662868)
chr4 (117-222)||(51630058-51630163)
chr4 (77-193)||(17822843-17822959)
chr4 (100-224)||(21731657-21731778)
chr4 (72-225)||(22030148-22030300)
chr4 (170-227)||(45935291-45935348)
chr4 (117-223)||(17884014-17884120)
chr4 (106-232)||(44138496-44138622)
chr4 (70-176)||(54426036-54426142)
chr4 (115-208)||(39691159-39691252)
chr4 (125-225)||(9760384-9760484)
chr4 (169-225)||(19494858-19494914)
chr4 (152-272)||(25885756-25885876)
chr4 (165-225)||(25904276-25904336)
chr4 (117-205)||(28300317-28300405)
chr4 (117-231)||(40174503-40174615)
chr4 (101-227)||(15177204-15177330)
chr4 (100-197)||(437245-437342)
chr4 (178-227)||(43505898-43505947)
chr4 (117-270)||(54392837-54392989)
chr4 (95-227)||(33586951-33587082)
chr4 (152-227)||(44797828-44797903)
chr4 (169-272)||(42404068-42404181)
chr4 (123-209)||(42685384-42685470)
chr4 (89-139)||(55302279-55302329)
chr4 (120-232)||(437453-437566)
chr4 (72-141)||(13126549-13126618)
chr4 (111-224)||(14011179-14011292)
chr4 (168-225)||(17204082-17204139)
chr4 (117-193)||(25332750-25332827)
chr4 (152-236)||(49004025-49004107)
chr4 (200-272)||(4212813-4212885)
chr4 (165-213)||(36409844-36409892)
chr4 (165-213)||(36424010-36424058)
[»] chr1 (62 HSPs)
chr1 (99-210)||(13809957-13810068)
chr1 (89-211)||(14576644-14576765)
chr1 (102-225)||(47432040-47432162)
chr1 (89-225)||(24915041-24915177)
chr1 (77-224)||(17603362-17603512)
chr1 (72-182)||(49938734-49938844)
chr1 (111-226)||(37517206-37517321)
chr1 (99-225)||(37631559-37631685)
chr1 (94-227)||(42174799-42174930)
chr1 (100-209)||(473124-473233)
chr1 (111-256)||(2294824-2294969)
chr1 (94-215)||(41184645-41184766)
chr1 (89-213)||(51929529-51929653)
chr1 (111-225)||(41195205-41195320)
chr1 (101-224)||(29904704-29904819)
chr1 (99-225)||(17830098-17830220)
chr1 (104-191)||(3234020-3234107)
chr1 (89-212)||(15477535-15477645)
chr1 (117-204)||(34290201-34290288)
chr1 (166-272)||(34619445-34619552)
chr1 (101-227)||(1510312-1510437)
chr1 (115-193)||(6556947-6557025)
chr1 (152-254)||(36070165-36070267)
chr1 (168-225)||(30582017-30582074)
chr1 (169-230)||(45145165-45145226)
chr1 (72-190)||(2295078-2295193)
chr1 (94-225)||(27976539-27976679)
chr1 (117-229)||(37842373-37842485)
chr1 (119-234)||(4576741-4576855)
chr1 (173-256)||(6102059-6102142)
chr1 (173-232)||(7028229-7028288)
chr1 (111-230)||(30581741-30581859)
chr1 (196-279)||(38189649-38189732)
chr1 (112-231)||(49888705-49888824)
chr1 (165-235)||(9572174-9572244)
chr1 (152-233)||(33186202-33186283)
chr1 (94-227)||(36872675-36872806)
chr1 (227-272)||(41195348-41195393)
chr1 (189-254)||(43722405-43722470)
chr1 (147-223)||(836387-836463)
chr1 (115-215)||(37769676-37769776)
chr1 (125-209)||(39976239-39976323)
chr1 (99-182)||(40977403-40977487)
chr1 (187-272)||(49938619-49938714)
chr1 (117-236)||(4700084-4700203)
chr1 (165-223)||(30191937-30191996)
chr1 (166-225)||(37473343-37473402)
chr1 (166-227)||(44932002-44932060)
chr1 (194-272)||(488898-488976)
chr1 (99-185)||(7107518-7107603)
chr1 (165-227)||(26678845-26678907)
chr1 (89-227)||(30286509-30286650)
chr1 (76-138)||(37517143-37517205)
chr1 (226-272)||(41505558-41505604)
chr1 (135-225)||(41505631-41505720)
chr1 (142-215)||(14385806-14385879)
chr1 (136-272)||(38001502-38001636)
chr1 (173-222)||(51190808-51190857)
chr1 (197-272)||(33527245-33527321)
chr1 (117-229)||(34952155-34952267)
chr1 (89-141)||(37473431-37473483)
chr1 (232-272)||(43990119-43990159)
[»] chr2 (45 HSPs)
chr2 (105-225)||(12464479-12464599)
chr2 (89-227)||(43279519-43279655)
chr2 (94-227)||(32592529-32592661)
chr2 (94-206)||(39073684-39073796)
chr2 (111-225)||(33319824-33319939)
chr2 (86-227)||(26201970-26202111)
chr2 (94-202)||(15757653-15757762)
chr2 (89-212)||(41851492-41851615)
chr2 (165-236)||(42420360-42420431)
chr2 (94-225)||(45229456-45229586)
chr2 (111-225)||(41241144-41241258)
chr2 (104-225)||(41407245-41407367)
chr2 (89-215)||(24100880-24101008)
chr2 (117-224)||(4026762-4026869)
chr2 (173-232)||(36114597-36114656)
chr2 (117-185)||(680487-680555)
chr2 (100-215)||(40835488-40835597)
chr2 (112-225)||(42868479-42868587)
chr2 (99-141)||(12194980-12195022)
chr2 (165-227)||(15305599-15305661)
chr2 (99-215)||(11201381-11201498)
chr2 (147-232)||(18962086-18962171)
chr2 (89-185)||(5745775-5745871)
chr2 (99-155)||(20926517-20926573)
chr2 (173-232)||(3611163-3611222)
chr2 (115-225)||(3932294-3932409)
chr2 (123-194)||(27695619-27695690)
chr2 (106-232)||(2416250-2416376)
chr2 (218-272)||(2981735-2981789)
chr2 (111-225)||(13325514-13325628)
chr2 (178-236)||(19608704-19608762)
chr2 (100-141)||(1633493-1633534)
chr2 (227-272)||(15757820-15757865)
chr2 (101-182)||(20952342-20952423)
chr2 (135-224)||(28206212-28206301)
chr2 (227-272)||(41407172-41407217)
chr2 (168-225)||(41812159-41812216)
chr2 (146-207)||(44439407-44439468)
chr2 (187-274)||(7825146-7825234)
chr2 (117-173)||(9595254-9595310)
chr2 (111-207)||(11513860-11513956)
chr2 (99-190)||(12289775-12289867)
chr2 (157-221)||(36125126-36125190)
chr2 (165-225)||(42659217-42659277)
chr2 (179-231)||(44119722-44119774)
[»] chr3 (43 HSPs)
chr3 (89-204)||(30443858-30443973)
chr3 (72-225)||(20880421-20880573)
chr3 (99-225)||(35959456-35959582)
chr3 (94-223)||(36631046-36631175)
chr3 (94-207)||(36189528-36189640)
chr3 (72-232)||(402515-402674)
chr3 (104-227)||(20170465-20170588)
chr3 (122-224)||(14145857-14145959)
chr3 (122-224)||(21335620-21335722)
chr3 (105-215)||(39980683-39980793)
chr3 (89-225)||(37689177-37689309)
chr3 (165-225)||(30956692-30956752)
chr3 (165-225)||(30972504-30972564)
chr3 (89-225)||(53789451-53789587)
chr3 (165-272)||(42747843-42747950)
chr3 (165-272)||(10704639-10704742)
chr3 (89-225)||(24684812-24684949)
chr3 (147-232)||(35127419-35127504)
chr3 (127-256)||(49034291-49034419)
chr3 (179-251)||(2128331-2128403)
chr3 (135-227)||(12862284-12862375)
chr3 (147-235)||(37689432-37689519)
chr3 (72-195)||(21367641-21367764)
chr3 (111-190)||(47132310-47132389)
chr3 (122-224)||(44061046-44061148)
chr3 (72-193)||(46778164-46778284)
chr3 (162-206)||(849625-849669)
chr3 (117-212)||(24085356-24085452)
chr3 (99-155)||(28795853-28795909)
chr3 (227-275)||(30956780-30956828)
chr3 (227-275)||(30972592-30972640)
chr3 (227-275)||(35328307-35328354)
chr3 (111-167)||(35696240-35696296)
chr3 (101-141)||(43062719-43062759)
chr3 (111-222)||(901871-901982)
chr3 (99-225)||(18405831-18405958)
chr3 (129-212)||(33405197-33405280)
chr3 (106-204)||(36139843-36139941)
chr3 (115-233)||(49465681-49465797)
chr3 (147-212)||(25447292-25447357)
chr3 (180-236)||(905051-905107)
chr3 (103-215)||(1816537-1816649)
chr3 (128-212)||(49092736-49092820)
[»] chr8 (37 HSPs)
chr8 (111-256)||(18930615-18930760)
chr8 (100-225)||(12976157-12976281)
chr8 (72-225)||(26771209-26771362)
chr8 (89-212)||(10758247-10758369)
chr8 (100-193)||(18133632-18133725)
chr8 (165-227)||(12497297-12497359)
chr8 (100-271)||(43045726-43045896)
chr8 (111-225)||(25930566-25930680)
chr8 (102-225)||(11861751-11861871)
chr8 (147-212)||(29205765-29205830)
chr8 (89-225)||(35534603-35534736)
chr8 (165-225)||(1058140-1058200)
chr8 (89-146)||(11407338-11407395)
chr8 (188-252)||(1929968-1930032)
chr8 (152-212)||(16733986-16734046)
chr8 (89-193)||(27028807-27028911)
chr8 (107-215)||(38602288-38602395)
chr8 (117-232)||(10114427-10114541)
chr8 (173-236)||(41475134-41475197)
chr8 (94-227)||(16825533-16825665)
chr8 (227-272)||(40981001-40981046)
chr8 (94-182)||(9130301-9130389)
chr8 (106-276)||(7514470-7514641)
chr8 (165-236)||(37353315-37353385)
chr8 (173-236)||(37444489-37444552)
chr8 (122-225)||(42043368-42043471)
chr8 (106-236)||(21653014-21653144)
chr8 (226-272)||(29169029-29169075)
chr8 (99-153)||(35643988-35644042)
chr8 (179-232)||(7026668-7026721)
chr8 (125-230)||(13814722-13814827)
chr8 (187-236)||(26215429-26215478)
chr8 (120-185)||(37531468-37531533)
chr8 (138-227)||(38750300-38750389)
chr8 (228-272)||(1058229-1058273)
chr8 (99-227)||(15180483-15180610)
chr8 (122-230)||(29056014-29056122)
[»] chr6 (32 HSPs)
chr6 (117-236)||(9093574-9093693)
chr6 (117-194)||(26694853-26694930)
chr6 (101-185)||(6536599-6536683)
chr6 (138-225)||(4163119-4163206)
chr6 (138-225)||(4224740-4224827)
chr6 (172-225)||(8147646-8147699)
chr6 (136-227)||(18076138-18076229)
chr6 (165-236)||(33117475-33117545)
chr6 (94-212)||(2735026-2735144)
chr6 (147-245)||(4006638-4006736)
chr6 (197-242)||(3171529-3171574)
chr6 (227-272)||(6538388-6538433)
chr6 (174-274)||(33080657-33080758)
chr6 (226-274)||(9604739-9604787)
chr6 (188-256)||(10616796-10616864)
chr6 (164-232)||(29274294-29274362)
chr6 (89-185)||(34430451-34430547)
chr6 (77-141)||(35070628-35070692)
chr6 (104-227)||(6016380-6016503)
chr6 (119-225)||(6909892-6909999)
chr6 (147-230)||(20671913-20671996)
chr6 (168-215)||(28621179-28621226)
chr6 (172-227)||(30536420-30536475)
chr6 (126-224)||(6200504-6200602)
chr6 (147-225)||(24626239-24626317)
chr6 (164-221)||(769087-769144)
chr6 (179-236)||(9559621-9559678)
chr6 (178-227)||(30536637-30536686)
chr6 (119-227)||(6538459-6538562)
chr6 (184-272)||(31813059-31813146)
chr6 (152-232)||(33259753-33259833)
chr6 (164-224)||(33943214-33943274)
[»] scaffold0103 (1 HSPs)
scaffold0103 (102-153)||(51993-52044)
[»] scaffold0221 (1 HSPs)
scaffold0221 (89-139)||(22261-22311)
[»] scaffold0050 (1 HSPs)
scaffold0050 (99-160)||(58751-58812)


Alignment Details
Target: chr5 (Bit Score: 275; Significance: 1e-153; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 301 - 620
Target Start/End: Complemental strand, 32021404 - 32021088
Alignment:
Q  301 cgaccacctccaaagccaccatggagtttctttttctggtttaaggctgcactctagttgtttgacaaaaagccccatgagggttatgtcttttggaaca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32021404 cgaccacctccaaagccaccatggagtttctttttctggtttaaggctgcactctagttgtttgacaaaaagcaccatgagggttatgtcttttggaaca 32021305  T
Q  401 aagtatccagtttacgaggctggcccccattgcaacaatctctctactcatccaccagctttcaattggacaattttgagaccaatgatagtcgaattgt 500  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32021304 aagtatccagtttacgaggctggtccccattgcaacaatctctctactcatccaccagctttcaattggacaattttgagaccaatgatagttgaattgt 32021205  T
Q  501 gcgaacacaagtcaaagaaattatccgtagctggattggaaaaaagac--tggattctcattcttatatcgccaggttgaatgaactgaactgaactgat 598  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||     ||||||||||||||    
T  32021204 gcgaacacaagtcaaagaaattatccgtaactggattggaaaaaagactgtggattctcattcttatatcgccaggttgaa-----tgaactgaactgat 32021110  T
Q  599 gctagtttggttatgtcttttt 620  Q
    ||||||||||||||||||||||    
T  32021109 gctagtttggttatgtcttttt 32021088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 32022239 - 32021943
Alignment:
Q  1 tgcagtccaattatgataattgcctgattagtataccaagaataatcaaaattgaagcaaaagattaaagcttggaagaacatacgagaacatcttaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  32022239 tgcagtccaattatgataattgcctgattagtataccaagaataatcaaaattgaagcaaaagattaaagcttggaagaacttacgaaaacatcttaaga 32022140  T
Q  101 caattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattta 200  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  32022139 caattttcacaagcttttttcagcctattttctcaagttatttaatatagtttactaaaataatttatagcatatacaaaagtaaattaactttaattta 32022040  T
Q  201 tcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataatctatttatccaaacatgatctatagatagttttgatgaac 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32022039 tcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataatctatttatccaaacatgatctatagatagttttgatgaac 32021943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 16457952 - 16458106
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||| ||||| || || |||| |||| |||| |||||| ||||| ||||||| |||||||||||||||||  ||| ||| | || |||| || |||||||    
T  16457952 ttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctcataaaaacaacttatagc 16458051  T
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||||||||||||| ||||  ||| ||||||||||||||||||| |||||||||||    
T  16458052 atatacaaaaacaatttaa-gttattttatcttttgctataaaaatagcttatgca 16458106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 206
Target Start/End: Original strand, 16937856 - 16937990
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||||||||| || || |||| |||| ||||| ||||| ||||||||||||||||||||||  |||||||  |||||||  ||| |||| || |||||||    
T  16937856 ttggaagaacttatgaaaacagcttatgacaaatttcataagcttttttcagcttattttcctaagttctccaatatagcgtataaaaacaacttatagc 16937955  T
Q  172 atatacaaaaacaaattaactttaatttatctttt 206  Q
    |||||||||||||| ||||| ||| ||||||||||    
T  16937956 atatacaaaaacaatttaacgttattttatctttt 16937990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 29925895 - 29925783
Alignment:
Q  115 ttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaa 214  Q
    |||||||| |||||||||| |||||||  ||||||| ||||  ||| || |||||||| ||||| |||||| |||||  || ||||||||||||||||||    
T  29925895 ttttttcaacttattttcataagttctccaatatagcttatgtaaacaacttatagcacatacagaaacaatttaacgctattttatcttttgctataaa 29925796  T
Q  215 actagcttatgca 227  Q
    | |||||||||||    
T  29925795 aatagcttatgca 29925783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 224
Target Start/End: Complemental strand, 10640050 - 10639898
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||| ||||| || || |||| |||| |||| |||||| |||||||||  |||||||||||| |||||||  || |||||||||  ||| || | ||  |    
T  10640050 ttgggagaacttatgaaaacagcttatgacatttttcataagctttttctagcttattttcataagttctccaaaatagtttatgtaaacaactcatcac 10639951  T
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttat 224  Q
    |||||||||||||| |||| || | |||||||||||||||| || ||||||||    
T  10639950 atatacaaaaacaatttaatttaattttatcttttgctatagaaatagcttat 10639898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 1465038 - 1465156
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    |||||||||||||||||||||| ||  || |||| |||| ||||||| ||||||| || |||||| | | ||||||||| |||||| | ||||||| ||     
T  1465038 ttttcagcttattttcacaagtcctccaagatagcttat-aaaataacttatagcttacacaaaagcgatttaactttattttatcctatgctatagaaa 1465136  T
Q  217 tagcttatgcataagcgctt 236  Q
    |||||||| |||||||||||    
T  1465137 tagcttatacataagcgctt 1465156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 5377268 - 5377359
Alignment:
Q  167 atagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataatc 258  Q
    ||||| ||||||||||||| || |||||| ||||||||||| |||| || ||| |||||||||||| |||  ||||||| ||||||||||||    
T  5377268 atagcttatacaaaaacaatttcactttagtttatcttttgttatataaatagtttatgcataagctcttaagctataagctgcaaataatc 5377359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 25461159 - 25461038
Alignment:
Q  101 caattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattta 200  Q
    ||||||||| || | ||||||||||||||||||  ||||||  |||| || |||| |||| || ||||| |||||||||||||||   |||||| |||||    
T  25461159 caattttcataaacgtttttcagcttattttcatcagttctccaatagagcttatgaaaacaacttataacatatacaaaaacaatacaacttt-attta 25461061  T
Q  201 tcttttgctataaaactagctta 223  Q
    |||||||||| |||| |||||||    
T  25461060 tcttttgctagaaaaatagctta 25461038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 35446113 - 35445999
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    ||||||||||||||||||||||| |||||||  |  |  | |||| | || |  ||||||| ||||||||||||| ||||||||| |||||| |||||||    
T  35446113 aagcttttttcagcttattttcataagttctccacaaatgcttatgagaagaggttatagcgtatacaaaaacaatttaactttattttatcatttgcta 35446014  T
Q  211 taaaactagcttatg 225  Q
    ||||| |||||||||    
T  35446013 taaaaatagcttatg 35445999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 32009763 - 32009646
Alignment:
Q  99 gacaattttcacaa-gcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaat 197  Q
    ||||||||||| || |||||||| | ||| |||||| |||||||  ||||||| |||| |||| |||||||||||||||||| ||||| | ||||| | |    
T  32009763 gacaattttcataaagcttttttgaacttgttttcataagttctccaatatagcttataaaaacaatttatagcatatacaagaacaattcaacttcatt 32009664  T
Q  198 ttatcttttgctataaaa 215  Q
    |||| |||| ||||||||    
T  32009663 ttatgtttttctataaaa 32009646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 236
Target Start/End: Complemental strand, 39105544 - 39105397
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| |||| | |||| ||||| |||| |||||||||||| |||||||  || |||| |||| |||| |  ||||||| ||||| ||||||| ||    
T  39105544 aacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaattt 39105445  T
Q  189 aactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||| | || || ||| |||||| || |||||||| |||||||||||    
T  39105444 aacttcatttcatatttagctatagaaatagcttatacataagcgctt 39105397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 12857695 - 12857761
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttat 155  Q
    |||| |||| |||||||||||||| |||||||||||||||||||| |||||||  ||||||| ||||    
T  12857695 aacaacttatgacaattttcacaaccttttttcagcttattttcataagttctccaatatagcttat 12857761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 25461649 - 25461774
Alignment:
Q  101 caattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattta 200  Q
    ||||||||| |||||||  ||| |||||||| | |||||||  |||| || |||| |||| || ||||| ||||||| ||| ||| |||||  || ||||    
T  25461649 caattttcataagctttgatcaacttattttaataagttctccaatagagcttataaaaacaacttataacatatactaaaccaatttaacgata-ttta 25461747  T
Q  201 tcttttgctataaaactagcttatgca 227  Q
    ||||||||||||||| |||||||||||    
T  25461748 tcttttgctataaaaatagcttatgca 25461774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 37112332 - 37112397
Alignment:
Q  173 tatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgt 238  Q
    ||||||||||||| ||||||||  ||||||||||||| || || |||||||| |||||||||||||    
T  37112332 tatacaaaaacaatttaactttgttttatcttttgctgtagaaatagcttatacataagcgcttgt 37112397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 3735148 - 3735228
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttata 169  Q
    |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||| | ||||| ||||| |||| || |||||    
T  3735148 aacagcttatgacaattttcaaaagcttttttcagcttatcttcataagttctcttatataatttataaaaacaacttata 3735228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 7674700 - 7674593
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    |||||||||||||||||||| ||||  || |||| |||| |||| | ||||| || ||||  ||||||| |||| |||| ||||||||||| |||| ||     
T  7674700 ttttcagcttattttcacaaattctccaagatagcttatgaaaacattttatggcttataagaaaacaatttaaatttattttatcttttggtatagaaa 7674601  T
Q  217 tagcttat 224  Q
    ||||||||    
T  7674600 tagcttat 7674593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 7705971 - 7706066
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataattta 167  Q
    |||| ||||| || || |||| |||| |||| |||||||  ||||||||| |||||||||||||||||||  ||||||| ||||| ||| ||||||    
T  7705971 ttgggagaacttatgaaaacagcttatgacagttttcacctgcttttttcggcttattttcacaagttctccaatatagcttatttaaacaattta 7706066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 9202738 - 9202873
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| |||| | |||| ||||| ||| ||||||||||||| |||||||| || |||  |||| |||| |  |||| || ||||  ||||||| ||    
T  9202738 aacagcttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaattt 9202837  T
Q  189 aactttaatttatcttttgctataaaactagcttat 224  Q
    ||||||| |||||||||||||| | || ||||||||    
T  9202838 aactttattttatcttttgctacagaaatagcttat 9202873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 42500302 - 42500408
Alignment:
Q  176 acaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca----------taagcgcttgtgctataatctgcaaataatctatttat 265  Q
    |||||||||| ||||||||| ||||||||||| ||||||| |||||||||||          | |||||||||||||||| ||| |||||| || |||||    
T  42500302 acaaaaacaatttaactttattttatcttttgatataaaaatagcttatgcaagcttatacattagcgcttgtgctataagctggaaataagctgtttat 42500401  T
Q  266 ccaaaca 272  Q
    |||||||    
T  42500402 ccaaaca 42500408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 4014431 - 4014561
Alignment:
Q  106 ttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttt 205  Q
    |||| ||||| ||||||||||||||||| |||||||  || |||| |||| |||| |  ||||    | | |||||||||  |||||||| |||||||||    
T  4014431 ttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatcttt 4014530  T
Q  206 tgctataaaactagcttatgcataagcgctt 236  Q
    ||||||| || |||||||| |||| ||||||    
T  4014531 tgctatagaaatagcttatacataggcgctt 4014561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 12857328 - 12857370
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttatttt 131  Q
    |||| |||| |||||||||||||||||||||||||||||||||    
T  12857328 aacaacttatgacaattttcacaagcttttttcagcttatttt 12857370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 34102367 - 34102421
Alignment:
Q  152 ttattaaaataatttatagcatatacaaaaacaaattaactttaatttatctttt 206  Q
    |||| |||| || ||||||||||||||||||||||||||| ||| ||||||||||    
T  34102367 ttataaaaacaacttatagcatatacaaaaacaaattaacattattttatctttt 34102421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 39477953 - 39477883
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttata 169  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||||| ||| |||| |||| ||||||| |||||    
T  39477953 gacaattttcaaaagtttttttctgcttattttcagaagttctctaacatagcttataaaaataacttata 39477883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 3932758 - 3932811
Alignment:
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||||||||||| | ||||| | ||||||||||||||||||| |||||||||    
T  3932758 atatacaaaaacaattaaacttcattttatcttttgctataaaaatagcttatg 3932811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 12554586 - 12554494
Alignment:
Q  101 caattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaacttt 194  Q
    ||||||||| ||| ||||||  ||| ||||||| | ||| || ||||||| |||| |||| || ||||||||||||||||||||| ||||||||    
T  12554586 caattttcataagattttttg-gctaattttcaaaggtttttcaatataggttataaaaacaacttatagcatatacaaaaacaatttaacttt 12554494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 34112865 - 34112808
Alignment:
Q  179 aaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||||| |||||||||||| ||||||| ||||| || |||||||| |||||||||||    
T  34112865 aaaacaacttaactttaattaatcttttactatagaaatagcttatacataagcgctt 34112808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 24030404 - 24030528
Alignment:
Q  102 aattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatac-aaaaacaaattaactttaattta 200  Q
    ||||| || |||| ||||| |||||||||||| ||||| | |||||||| |||| |||| || ||||| ||||| | ||||| || ||||||||| ||||    
T  24030404 aatttccaaaagcgttttttagcttattttcataagttatctaatatagcttataaaaacaacttataacatatccaaaaaataatttaactttatttta 24030503  T
Q  201 tcttttgctataaaactagcttatg 225  Q
    ||  ||||||||  | |||||||||    
T  24030504 tcggttgctatagcaatagcttatg 24030528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 41981774 - 41981846
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttat-gcataagcgctt 236  Q
    ||||||| |||||| ||||| |||||||||| ||||||||||| |||| || || ||||| ||||||||||||    
T  41981774 ttatagcttatacataaacatattaactttattttatcttttgatatagaaataacttatagcataagcgctt 41981846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 3735566 - 3735617
Alignment:
Q  174 atacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||||| |||||||||||| || ||||||||||||| || |||||||||    
T  3735566 atacaaaaaaaaattaactttatttcatcttttgctatagaaatagcttatg 3735617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 6587114 - 6587193
Alignment:
Q  106 ttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaa 185  Q
    |||| ||||| ||| |||||||||||||||||||||  | ||||| |||| |||| || ||||||| ||||| |||||||    
T  6587114 ttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttatagcttatacgaaaacaa 6587193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 14932293 - 14932235
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttat 224  Q
    ||||||| ||||||||| ||| ||||||||| ||||||||||||||||||| ||| ||||    
T  14932293 ttatagcttatacaaaa-caatttaactttattttatcttttgctataaaaatagattat 14932235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 34736592 - 34736658
Alignment:
Q  164 tttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataag 231  Q
    |||||||| |||||||||| || ||| ||||| ||| |||||||||||| || |||||||||||||||    
T  34736592 tttatagcttatacaaaaataatttagcttta-tttctcttttgctatagaaatagcttatgcataag 34736658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 36797156 - 36797199
Alignment:
Q  167 atagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||    
T  36797156 atagcatatagaaaaacaatttaactttattttatcttttgcta 36797199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 40426830 - 40426719
Alignment:
Q  104 ttttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatct 203  Q
    |||||| |||||||||| |||||||||||  |||||||  || | || |||   ||| |  ||| |||| |||||||||||| ||| ||||| |||||||    
T  40426830 ttttcataagcttttttaagcttattttcgtaagttctccaagacagcttacggaaacagcttacagcaaatacaaaaacaatttagctttattttatct 40426731  T
Q  204 tttgctataaaa 215  Q
    ||||||||||||    
T  40426730 tttgctataaaa 40426719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 42569046 - 42569117
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||||| ||||| ||||||| |  |||||| |||||||||||||||| || |||||| | |||||||||||    
T  42569046 ttatagcttatacgaaaacaattagactttattttatcttttgctatagaaatagctttttcataagcgctt 42569117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 9107170 - 9107092
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataattta 167  Q
    |||| |||| |||||||||||||| |||||||| ||| ||||||| |||||||  ||||||  |||  |||||||||||    
T  9107170 aacagcttaggacaattttcacaaacttttttctgctaattttcataagttctccaatataacttacaaaaataattta 9107092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 6593359 - 6593235
Alignment:
Q  109 acaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgc 208  Q
    ||||||| ||||||||||||||||| ||| ||| |||  ||| |||| |||| |  ||||||| ||||| | || || ||||||||| |||||||||||     
T  6593359 acaagctcttttcagcttattttcataagctctctaaggtagcttatcaaaacagcttatagcctatac-agaataatttaactttattttatcttttgt 6593261  T
Q  209 tataaaactagcttatgcataagcgc 234  Q
    |||| || | | |||| |||||||||    
T  6593260 tatagaaattgtttatacataagcgc 6593235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 10363809 - 10363760
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaa 160  Q
    ||||| ||||||||||||||||||||||||| | | ||||||||| ||||    
T  10363809 aagctgttttcagcttattttcacaagttctctgagatagtttatgaaaa 10363760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 24030556 - 24030601
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    ||||| ||||||||||||| |||||||||| || ||||||||||||    
T  24030556 ataagtgcttgtgctataagctgcaaataagctgtttatccaaaca 24030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 42100245 - 42100200
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    ||||||||||||| ||||| ||||||||||  ||||||||||||||    
T  42100245 ataagcgcttgtgatataagctgcaaataagttatttatccaaaca 42100200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 215
Target Start/End: Original strand, 13697764 - 13697875
Alignment:
Q  104 ttttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt-aactttaatttatc 202  Q
    |||||| ||| |||||||| |||||||||| || ||||  || |||| |||| |||| || |||||  ||||| ||||| ||||| ||| ||| ||||||    
T  13697764 ttttcataagtttttttcaacttattttcataacttctccaacatagcttat-aaaacaacttataatatataaaaaaaaaaatttaacattattttatc 13697862  T
Q  203 ttttgctataaaa 215  Q
    |||||||||||||    
T  13697863 ttttgctataaaa 13697875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 40590508 - 40590460
Alignment:
Q  188 taactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    |||||||| |||||||||| ||||| || |||||||| |||||||||||    
T  40590508 taactttattttatctttttctatagaagtagcttatacataagcgctt 40590460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 4e-43; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 415 - 576
Target Start/End: Complemental strand, 11788845 - 11788669
Alignment:
Q  415 cgaggctggcccccattgcaacaatctctctactcatccaccagctttcaa-------------ttggacaattttgagaccaatgatagtcgaattgtg 501  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||             ||| ||||||||||||||||||||||||||||||||    
T  11788845 cgaggctggcccccattgcaacaatctctcttttcatccaccagctgtcaaacatctggaaaaattgtacaattttgagaccaatgatagtcgaattgtg 11788746  T
Q  502 cgaacacaagtcaaagaaattatccgtagctggattggaaaaaagac--tggattctcattcttatatcgccaggtt 576  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| | ||||||| ||||||||    
T  11788745 cgaacacaagtcaaagaaattatccgtaactggattggaaaaaagactgtggattctcttccttatattgccaggtt 11788669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 9106021 - 9105909
Alignment:
Q  464 aattggacaattttgagaccaatgatagtcgaattgtgcgaacacaagtcaaagaaattatccgtagctggattggaaaaaagactggattctcattctt 563  Q
    ||||||||||| |||||||||||||||||| || ||||||||||||||||||||| | |||| ||| |||||||| |||| ||| |||||||||||||||    
T  9106021 aattggacaatgttgagaccaatgatagtcaaaatgtgcgaacacaagtcaaagatactatctgtaactggattgaaaaagagattggattctcattctt 9105922  T
Q  564 atatcgccaggtt 576  Q
    |||| || |||||    
T  9105921 atattgctaggtt 9105909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 99 - 224
Target Start/End: Original strand, 38138479 - 38138604
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatt 198  Q
    ||||||||||| |||||||||||| |||||||||| |||||| | ||||||| | || |||| || ||||||||||||||||| |||  |||| ||| ||    
T  38138479 gacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacgttactt 38138578  T
Q  199 tatcttttgctataaaactagcttat 224  Q
    |||||| | |||||||| ||||||||    
T  38138579 tatcttatactataaaaatagcttat 38138604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 30570921 - 30571057
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||||| ||||||||||||  ||| ||||| |||||||  ||| ||| |||| ||||||  |||||||||||||||||| || ||    
T  30570921 aacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaaaatagcttatagcatatacaaaaataattt 30571020  T
Q  189 aactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||| |||| |||| |||||| || |||||||||    
T  30571021 aactttattttacctttcgctatataagtagcttatg 30571057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 27863715 - 27863806
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaa 180  Q
    |||| ||| ||| |||||||| || ||||||||||||||| |||| ||||||| |||||||||||||||||| || ||||||||||||||||    
T  27863715 aacagcttgagaaaattttcaaaaacttttttcagcttatgttcataagttctctaatatagtttattaaaacaacttatagcatatacaaa 27863806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 19302553 - 19302687
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||||| || ||||||||| |||||||||| ||||||||    |||| |||| |||| || ||||| ||||||||||||||| ||    
T  19302553 aacagcttatgacaattttcataaacttttttcaacttattttcataagttctt----atagcttataaaaacaacttataacatatacaaaaacaattt 19302648  T
Q  189 aactttaatttatcttttgctataaaactagcttatgca 227  Q
    ||| ||| | |||||| |||| ||||| |||||||||||    
T  19302649 aacgttactatatcttctgctgtaaaaatagcttatgca 19302687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 420418 - 420302
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    |||| ||||||| |||||||||| |||||||  ||||||| |||   ||| || ||||||||||||||||||||| | ||| ||| ||||||||||||||    
T  420418 aagcctttttcaacttattttcataagttctccaatatagcttacggaaacaacttatagcatatacaaaaacaattgaacattattttatcttttgcta 420319  T
Q  211 taaaactagcttatgca 227  Q
    ||||  |||||||||||    
T  420318 taaacatagcttatgca 420302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 112 - 256
Target Start/End: Complemental strand, 39907860 - 39907716
Alignment:
Q  112 agcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctat 211  Q
    |||| |||||||||||||||||  |||||| ||| ||||||||| |||| | |||||||| ||||||||||||| ||||| ||| ||||  |||||||      
T  39907860 agctgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaatttaaccttattttactttttgctga 39907761  T
Q  212 aaaactagcttatgcataagcgcttgtgctataatctgcaaataa 256  Q
      || || ||||| |||||| |||| |||||||| ||||||||||    
T  39907760 ggaaatatcttatacataagtgcttatgctataagctgcaaataa 39907716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 45790421 - 45790532
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| ||||||||| | |||||||| |||||||||||||| ||||| |  |||||||||||| |||| || ||||||| |||| | ||||||||||||||    
T  45790421 cttatgacaatttttaaaagctttt-tcagcttattttcataagttatccaatatagtttataaaaacaacttatagcttataaataaacaaattaactt 45790519  T
Q  194 taatttatctttt 206  Q
    || ||||||||||    
T  45790520 tagtttatctttt 45790532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 28341052 - 28341169
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| ||||||||||| ||||||||| |||||||||| || ||||||| |||||||||||||  ||| || |||||||||||| || |  || |||||||    
T  28341052 cttatgacaattttcaaaagctttttccagcttattt-cataagttctctaatatagtttatacaaacaacttatagcatatataacataaatttaactt 28341150  T
Q  194 taatttatcttttgctata 212  Q
    |  ||||||||||||||||    
T  28341151 tggtttatcttttgctata 28341169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 48470109 - 48469988
Alignment:
Q  104 ttttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatct 203  Q
    |||||| |||||||||| ||||||| |||| ||||| || || |||| |||| |||| || |||||  |||||||||||||| ||||||| | |||||||    
T  48470109 ttttcataagcttttttgagcttatgttcataagttattcaaaatagcttatgaaaacaacttatattatatacaaaaacaatttaacttaattttatct 48470010  T
Q  204 tttgctataaaactagcttatg 225  Q
    |||||| || || |||||||||    
T  48470009 tttgctgtagaaatagcttatg 48469988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 40252105 - 40252233
Alignment:
Q  97 aagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaa 196  Q
    ||||||||||||  |||||| | |||||||||||||| |||||||  || |||  |||| |||| |  ||||| ||||||||||||| | ||||||||      
T  40252105 aagacaattttcgtaagcttctatcagcttattttcataagttctccaagataacttatgaaaagagcttataacatatacaaaaacgatttaactttgt 40252204  T
Q  197 tttatcttttgctataaaactagcttatg 225  Q
    |||||| ||||| ||||||||||||||||    
T  40252205 tttatcatttgcaataaaactagcttatg 40252233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 340 - 411
Target Start/End: Complemental strand, 11788952 - 11788881
Alignment:
Q  340 tttaaggctgcactctagttgtttgacaaaaagccccatgagggttatgtcttttggaacaaagtatccagt 411  Q
    ||||||| ||||| ||  ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  11788952 tttaaggatgcacgctttttgtttgacaaaaagacccaagagggttatgtcttttggaacaaagtagccagt 11788881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 20269633 - 20269530
Alignment:
Q  112 agcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctat 211  Q
    ||||||||||| |||||||||| || ||||  |||| || ||| ||||| || ||||| ||| ||||||||||| ||||||||  |||||||||||||||    
T  20269633 agcttttttcaacttattttcataaattctccaatacagcttagtaaaacaacttataacatttacaaaaacaatttaactttgttttatcttttgctat 20269534  T
Q  212 aaaa 215  Q
    ||||    
T  20269533 aaaa 20269530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 20881654 - 20881749
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctata 212  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| || ||||||| | |||  |||||| |||||||   ||||||||||||||||    
T  20881654 ttttcagcttattttcataagttctttaagatagtttatgaaaacaacttatagcttgtacggaaacaatttaacttcgttttatcttttgctata 20881749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 31744362 - 31744251
Alignment:
Q  116 tttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaa 215  Q
    ||||||| |||||||||| |||||||| |||||||||||| ||| ||| ||| ||||||| ||||||||| |||||  || |||||||||  |||| |||    
T  31744362 tttttcaacttattttcataagttcttcaatatagtttataaaattaacttaaagcatatccaaaaacaatttaacgctattttatctttaactatgaaa 31744263  T
Q  216 ctagcttatgca 227  Q
     ||| |||||||    
T  31744262 ataggttatgca 31744251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 34744103 - 34744012
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaa 185  Q
    |||| |||||||||||||||||||||||  |||||||| | |||||||  ||||||| |||| |||| || ||||| |||||||||||||||    
T  34744103 cttatgacaattttcacaagcttttttcgccttatttttataagttctccaatatagcttatgaaaacaacttataccatatacaaaaacaa 34744012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 331 - 405
Target Start/End: Complemental strand, 9106199 - 9106125
Alignment:
Q  331 tttttctggtttaaggctgcactctagttgtttgacaaaaagccccatgagggttatgtcttttggaacaaagta 405  Q
    ||||||| |||||||| |||| | | ||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  9106199 tttttctagtttaaggatgcatttttgttgtttgacaaaaatccccaaaagggttatgtcttttggaacaaagta 9106125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 22283756 - 22283850
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttt 205  Q
    ||||| |||||||||||||| || ||||||| ||| || |||||| |||| | ||||||||  |||||||||||| ||||||||| |||||||||    
T  22283756 aagctgttttcagcttatttccataagttctctaagatggtttatgaaaacagtttatagctgatacaaaaacaatttaactttattttatcttt 22283850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 45264175 - 45264049
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| |||||  ||||| || ||||||| ||||||||||  ||||||| | |||||  | || ||||||  ||||||||||||||||||||| ||    
T  45264175 aacagcttatgacaaagttcacgagtttttttcggcttattttcctaagttctctgatatatatcataaaaatagcttatagcatatacaaaaacaattt 45264076  T
Q  189 aactttaatttatcttttgctataaaa 215  Q
    ||||||| || ||||||| ||||||||    
T  45264075 aactttatttcatctttttctataaaa 45264049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 195
Target Start/End: Original strand, 46280283 - 46280368
Alignment:
Q  110 caagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaacttta 195  Q
    ||||||||||||||| |||||||| |||||||  ||||||| |||| |||| |  ||||||||||||||||||||| |||| ||||    
T  46280283 caagcttttttcagcctattttcataagttctccaatatagcttataaaaacagcttatagcatatacaaaaacaatttaaattta 46280368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 119954 - 119854
Alignment:
Q  125 ttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttat 224  Q
    ||||||||||||||||| |||| ||  |||| |||| || ||||||||| |||| |||||| ||||||||| |||||||||| || || || ||||||||    
T  119954 ttattttcacaagttctctaatgtaacttataaaaacaacttatagcatttacacaaacaatttaactttattttatcttttcctgtagaaatagcttat 119855  T
Q  225 g 225  Q
    |    
T  119854 g 119854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 33601400 - 33601511
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| |||| |||||| |||||||||||||||||  |||| ||||||| ||| |||| ||| ||||| || |||||||| ||||||||| || ||    
T  33601400 aacagcttatgacacttttcataagcttttttcagcttaaattcataagttctctaagatagctta-taaaacaacttatagcaaatacaaaaataattt 33601498  T
Q  189 aactttaatttat 201  Q
    ||||||| |||||    
T  33601499 aactttattttat 33601511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 4970813 - 4970914
Alignment:
Q  119 ttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaacta 218  Q
    ||||| ||||||||| ||||||| |||||||  |||| |||| || |||||||||||||||||||     || |||| |||||||||||||||| || ||    
T  4970813 ttcagtttattttcataagttctctaatatatcttataaaaagaacttatagcatatacaaaaac-----aattttattttatcttttgctatagaaata 4970907  T
Q  219 gcttatg 225  Q
    |||||||    
T  4970908 gcttatg 4970914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 34464279 - 34464329
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaa 215  Q
    ||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  34464279 ttataacatatacaaaaacaaattaactttaatttatctttttttataaaa 34464329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 49019935 - 49019853
Alignment:
Q  102 aattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaaca 184  Q
    ||||||||||| |||||||| | ||||||||| |||||||  ||||||  |||| ||||||  ||||||||||||||||||||    
T  49019935 aattttcacaatcttttttcggtttattttcataagttctacaatataacttataaaaatagcttatagcatatacaaaaaca 49019853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 8960664 - 8960740
Alignment:
Q  136 agttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctata 212  Q
    |||||| ||||||||||||| ||||  | | ||| ||||||||||||||| ||||||||| |||||| |||||||||    
T  8960664 agttctctaatatagtttataaaaactactcataacatatacaaaaacaatttaactttattttatcatttgctata 8960740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 20258569 - 20258466
Alignment:
Q  112 agcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctat 211  Q
    |||||||||||  ||||||||| |  ||||  |||| || ||| ||||| || ||||||||  ||||||||||| ||||| ||| |||||||||||||||    
T  20258569 agcttttttcaatttattttcatatattctccaatacagcttagtaaaacaacttatagcaattacaaaaacaatttaacattattttatcttttgctat 20258470  T
Q  212 aaaa 215  Q
    ||||    
T  20258469 aaaa 20258466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 33678832 - 33678738
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctat 211  Q
    |||||| |||||||||||||||| |  || |||| |||| |||| |  ||||||| | ||||||||| | ||||||||| |||||||||||||||    
T  33678832 ttttcaacttattttcacaagttttccaagatagcttatgaaaacagcttatagcttttacaaaaaccatttaactttactttatcttttgctat 33678738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 44216786 - 44216888
Alignment:
Q  115 ttttttcagcttattttcacaagttctttaatatagttt-----attaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgct 209  Q
    |||||| |||||||||||| |||||||||||||||| ||     || ||||||   |||||||||| ||||||  | ||||||||| |||||||||||||    
T  44216786 tttttttagcttattttcataagttctttaatatagcttataccataaaaatagcctatagcatatccaaaaattatttaactttattttatcttttgct 44216885  T
Q  210 ata 212  Q
    |||    
T  44216886 ata 44216888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 48507776 - 48507678
Alignment:
Q  116 tttttcagcttattttcacaagttctttaat-atagtttattaaaataatttatagcatatacaaaaacaaattaactttaat-ttatcttttgctata 212  Q
    |||||||||||| ||||| ||||||| |||  || | |||| |||| | |||||||||||||||||||||| ||||||| | | |||||||||||||||    
T  48507776 tttttcagcttaatttcataagttctctaaggatggcttatgaaaacagtttatagcatatacaaaaacaatttaacttcattcttatcttttgctata 48507678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 20526504 - 20526403
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    ||||| |||| ||||||||||||  ||||||  || |||| |||| |||| |  ||||||||| |||||| | || ||||||||| ||||||||||||||    
T  20526504 aagctgtttttagcttattttcattagttctccaaaatagcttatgaaaacagcttatagcatgtacaaacataatttaactttattttatcttttgcta 20526405  T
Q  211 ta 212  Q
    ||    
T  20526404 ta 20526403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 28613608 - 28613665
Alignment:
Q  173 tatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataa 230  Q
    ||||||||||||| ||||||||  ||||||||||| ||||||| |||||||| |||||    
T  28613608 tatacaaaaacaatttaactttgttttatcttttgttataaaaatagcttatacataa 28613665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 45338523 - 45338391
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| ||||||||| |  || |||||||| ||||||||||  ||||||  ||||||| |||  |||| || ||| ||||||||||||||||| ||||  |    
T  45338523 cttatgacaatttttattagtttttttcaacttattttcatcagttctccaatatagcttaa-aaaacaacttacagcatatacaaaaacaatttaaggt 45338425  T
Q  194 taatttatcttttgctataaaactagcttatgca 227  Q
    || ||||| ||||||||| ||| || ||||||||    
T  45338424 tattttattttttgctatgaaaataacttatgca 45338391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 33128811 - 33128767
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttat 155  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||    
T  33128811 aagctttttttagcttattttcacaagttctccaatatagtttat 33128767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 39629947 - 39630039
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaa 181  Q
    |||| |||| ||||||||||| |||||||||||| |||||  ||| |||||||| ||||||| |||  |||| ||   |||||||||||||||    
T  39629947 aacagcttatgacaattttcataagcttttttcaacttatagtcataagttcttcaatatagcttaaaaaaacaaagcatagcatatacaaaa 39630039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 43694594 - 43694666
Alignment:
Q  123 gcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaacttta 195  Q
    ||||||||||| ||||||||  |||||| |||| |||| |  ||||||||||||||||||||| |||| ||||    
T  43694594 gcttattttcataagttcttcgatatagcttataaaaacagcttatagcatatacaaaaacaatttaaattta 43694666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 11619148 - 11619239
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaa 180  Q
    |||| |||| ||||||||||| |||||||||||| |||| ||||| |||||||  ||  ||| |||| |||| |||| ||||||||| ||||    
T  11619148 aacaacttatgacaattttcataagcttttttcaacttaatttcataagttctccaacgtagcttataaaaacaattgatagcatattcaaa 11619239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 34083591 - 34083638
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctata 212  Q
    ||||||| |||||| |||||| ||||||||| ||||||||||||||||    
T  34083591 ttatagcttatacacaaacaatttaactttattttatcttttgctata 34083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 37064481 - 37064603
Alignment:
Q  116 tttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaa 215  Q
    |||||||||||||||||| |||| || ||| |||| |||  |||| |  |||||||||||  |||||||| |||||| || || |||||| |||||| ||    
T  37064481 tttttcagcttattttcataagtcctctaaaatagcttacgaaaacagcttatagcatatgtaaaaacaatttaactgtatttcatctttggctatagaa 37064580  T
Q  216 ctagcttatg--cataagcgctt 236  Q
     ||||| |||  |||||||||||    
T  37064581 atagctcatgtacataagcgctt 37064603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 45004763 - 45004708
Alignment:
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||| |||| |||| ||||||||| ||||||||||||||||||| ||| |||||||    
T  45004763 atatgcaaatacaatttaactttattttatcttttgctataaaaatagtttatgca 45004708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 3928010 - 3928052
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttct 141  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  3928010 gacaattttcataagcttttttcaacttattttcataagttct 3928052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 20234507 - 20234437
Alignment:
Q  145 atatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaa 215  Q
    |||||| ||| ||||| || ||||||||  ||||||||||| |||| | || |||||||||||||||||||    
T  20234507 atatagcttagtaaaacaacttatagcaattacaaaaacaatttaattatattttatcttttgctataaaa 20234437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 27566689 - 27566739
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttcttta 144  Q
    |||| ||||| |||||||||||||||||| |||||||||| ||||| ||||    
T  27566689 cttatgacaactttcacaagcttttttcaacttattttcataagtttttta 27566739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 30180055 - 30180009
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctat 211  Q
    ||||||| ||||| ||||||| ||||||||| |||||||||||||||    
T  30180055 ttatagcttatacgaaaacaatttaactttattttatcttttgctat 30180009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 101 - 212
Target Start/End: Original strand, 34714124 - 34714237
Alignment:
Q  101 caattttcacaagcttttttcagcttattttcaca--agttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatt 198  Q
    ||||||||| |||||||||||| |||| ||||| |  | |||| ||||| |  |||| |||| ||||||||||| ||  |||| ||| |||||| |||||    
T  34714124 caattttcaaaagcttttttcaacttaatttcatataaattctctaatacaagttataaaaacaatttatagcacattaaaaatcaatttaactctaatt 34714223  T
Q  199 tatcttttgctata 212  Q
    |||| |||||||||    
T  34714224 tatcatttgctata 34714237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 45806408 - 45806454
Alignment:
Q  181 aacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    ||||| ||||| ||| ||||||||||||||||||| |||||||||||    
T  45806408 aacaatttaacgttattttatcttttgctataaaaatagcttatgca 45806454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 9050689 - 9050644
Alignment:
Q  115 ttttttcagcttattttcacaagttctttaatatagtttattaaaa 160  Q
    |||||||||||||||||||||||||||  || ||||||||| ||||    
T  9050689 ttttttcagcttattttcacaagttctccaagatagtttatgaaaa 9050644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 19022575 - 19022676
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||||| ||| | | |||| |||||||||| |||||||  ||||||| |||| |||| || ||||||||| ||  ||||||| ||    
T  19022575 aacaacttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaacaacttatagcatttattaaaacaattt 19022674  T
Q  189 aa 190  Q
    ||    
T  19022675 aa 19022676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 28614502 - 28614461
Alignment:
Q  100 acaattttcacaagcttttttcagcttattttcacaagttct 141  Q
    |||||||||||||||||||||||| ||| ||||| |||||||    
T  28614502 acaattttcacaagcttttttcagtttaatttcataagttct 28614461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 33602017 - 33602117
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| |||| |||||| |||| ||||||||||||  |||| ||||||| ||| |||| ||| |||||  | |||||||| |||||||||||| ||    
T  33602017 aacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaattt 33602115  T
Q  189 aa 190  Q
    ||    
T  33602116 aa 33602117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 38500072 - 38500117
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    ||||||||||||||||||| |||||||||| || |||||| |||||    
T  38500072 ataagcgcttgtgctataaactgcaaataagctgtttatctaaaca 38500117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 39967983 - 39967878
Alignment:
Q  106 ttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttt 205  Q
    |||| ||||| |||||| ||||||||||  |||||| | | |||| |||| |||| || |||||||   ||| ||||||| |||| |||| |||||||||    
T  39967983 ttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagctagtacgaaaacaatttaagtttattttatcttt 39967884  T
Q  206 tgctat 211  Q
    ||||||    
T  39967883 tgctat 39967878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 46078144 - 46078091
Alignment:
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||||||||||| ||||||||  |||||||||| |||||||| || ||||||    
T  46078144 atatacaaaaacaatttaactttgttttatctttttctataaaaataacttatg 46078091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 38499903 - 38499955
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttct 141  Q
    |||| |||| |||| |||||| ||||||||| ||||||||||||| |||||||    
T  38499903 aacagcttatgacatttttcataagctttttccagcttattttcataagttct 38499955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 39279767 - 39279707
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||| |||||||||| ||| ||||||||  |||||||||||||||| ||  ||||||||    
T  39279767 ttatagaatatacaaaagcaatttaactttgttttatcttttgctatagaaacagcttatg 39279707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 40377864 - 40377948
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaacttta 195  Q
    |||||||||| || ||||||||| |||||||  ||||||| |||| |||| || ||  | |||||||||||| || |||||||||    
T  40377864 aagcttttttgagtttattttcataagttctccaatataggttatgaaaacaacttgcaacatatacaaaaagaatttaacttta 40377948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 5e-36; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 466 - 576
Target Start/End: Original strand, 45092349 - 45092461
Alignment:
Q  466 ttggacaattttgagaccaatgatagtcgaattgtgcgaacacaagtcaaagaaattatccgtagctggattggaaaaaagac--tggattctcattctt 563  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||||||  |||||||||||||||    
T  45092349 ttggacaatgttgagaccaatgatagtcgaaatgtgcgaacacaagtcaaagatattatccataactggattggaaaaaagaccgtggattctcattctt 45092448  T
Q  564 atatcgccaggtt 576  Q
    |||| ||||||||    
T  45092449 atattgccaggtt 45092461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 466 - 576
Target Start/End: Original strand, 21781415 - 21781527
Alignment:
Q  466 ttggacaattttgagaccaatgatagtcgaattgtgcgaacacaagtcaaagaaattatccgtagctggattggaaaaaagac--tggattctcattctt 563  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||    
T  21781415 ttggacaatgttgagaccaatgatagtcgaaatatgcgaacacaagtcaaagatattatccgtaactggattggaaaaaagactttggattctcattctt 21781514  T
Q  564 atatcgccaggtt 576  Q
    |||| || |||||    
T  21781515 atattgctaggtt 21781527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 466 - 576
Target Start/End: Original strand, 24376095 - 24376207
Alignment:
Q  466 ttggacaattttgagaccaatgatagtcgaattgtgcgaacacaagtcaaagaaattatccgtagctggattggaaaaaagac--tggattctcattctt 563  Q
    ||||||||| |||||||| |||||||||||| |||||||||| |||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||    
T  24376095 ttggacaatgttgagaccgatgatagtcgaaatgtgcgaacagaagtcaaagatattatccgtaactggattggaaaaaagactgtggattctcattctt 24376194  T
Q  564 atatcgccaggtt 576  Q
    |||| ||||||||    
T  24376195 atattgccaggtt 24376207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 24375919 - 24375995
Alignment:
Q  335 tctggtttaaggctgcactctagttgtttgacaaaaagccccatgagggttatgtcttttggaacaaagtatccagt 411  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  24375919 tctggtttaaggctgcactcttgttgtttgacaaaaagccccaaaagggttatgtcttttggaacaaagtagccagt 24375995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 45092173 - 45092243
Alignment:
Q  335 tctggtttaaggctgcactctagttgtttgacaaaaagccccatgagggttatgtcttttggaacaaagta 405  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  45092173 tctggtttaaggctgcactcttgttgtttgacaaaaagccccaaaagggttatgtcttttggaacaaagta 45092243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 55414410 - 55414548
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| |||| |||||| |||||||||||| |||||||||| |||||||  || |||  |||| |||| |||||||||||||| |||||| |||||    
T  55414410 aacagcttatgacatttttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaacaatttatagcatatgcaaaaaaaaatt 55414509  T
Q  189 aactttaatttatcttttgctataaaactagcttatgca 227  Q
    ||||||| |||||||||| | ||| || |||||||||||    
T  55414510 aactttattttatcttttccaatagaaatagcttatgca 55414548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 89 - 272
Target Start/End: Complemental strand, 2244131 - 2243948
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttat--taaaataatttatagcata-tacaaaaacaa 185  Q
    |||| |||| |||||| |||| || ||||||||| |||||||||| |||||||  ||||||| ||||  ||||| || |||||||||| |||||||||||    
T  2244131 aacagcttatgacaatattcataaacttttttcaccttattttcataagttctccaatatagcttatattaaaacaacttatagcataatacaaaaacaa 2244032  T
Q  186 attaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
      |||  ||| |||||||||| |||||||||||||||||| |  || | ||||||||||| ||| ||||||||| ||||||||||||    
T  2244031 cgtaatattattttatctttt-ctataaaactagcttatgaa--agtgtttgtgctataagctgtaaataatctgtttatccaaaca 2243948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 21781239 - 21781315
Alignment:
Q  335 tctggtttaaggctgcactctagttgtttgacaaaaagccccatgagggttatgtcttttggaacaaagtatccagt 411  Q
    ||||||||||||||||||||| |||||||||||||||||||||  || ||||||||||||||||||||||| |||||    
T  21781239 tctggtttaaggctgcactcttgttgtttgacaaaaagccccaaaagagttatgtcttttggaacaaagtagccagt 21781315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 100 - 227
Target Start/End: Original strand, 54069418 - 54069545
Alignment:
Q  100 acaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattt 199  Q
    |||||||||| ||||| |||| | |||||||||| | |||||| ||||||  |||| |||| || ||||||||||||||||||||| ||||| ||| |||    
T  54069418 acaattttcataagctgtttttaacttattttcatatgttcttcaatataacttataaaaacaaattatagcatatacaaaaacaatttaacattatttt 54069517  T
Q  200 atcttttgctataaaactagcttatgca 227  Q
    |||||||| ||||||| |||| ||||||    
T  54069518 atcttttgatataaaaatagcatatgca 54069545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 20109073 - 20108951
Alignment:
Q  105 tttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatctt 204  Q
    |||||||||||||||||  || ||||||| ||||||| |||||||  |||| |||| |  ||||| ||||||||||||||| ||||||| | ||||||||    
T  20109073 tttcacaagcttttttcgactcattttcaaaagttctctaatatatcttataaaaacagcttataccatatacaaaaacaacttaacttcattttatctt 20108974  T
Q  205 ttgctataaaactagcttatgca 227  Q
    || || |||||||||||||||||    
T  20108973 ttcctctaaaactagcttatgca 20108951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 74 - 227
Target Start/End: Complemental strand, 41336855 - 41336703
Alignment:
Q  74 ggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcat 173  Q
    |||||||| || || |||| |||| |||| |||||| |||||||||||| |||||||||  || ||||| |   ||| |||  |||| |||||||| |||    
T  41336855 ggaagaacttaagaaaacagcttatgacagttttcataagcttttttcaacttattttcgtaaattcttcaccctagcttagaaaaacaatttataacat 41336756  T
Q  174 atacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||||||||||| ||||||||| |||||| |||||||||||| |||||||||||    
T  41336755 atacaaaaacaatttaactttattttatc-tttgctataaaaatagcttatgca 41336703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 7839351 - 7839447
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaa 185  Q
    |||| |||| ||||||||||| |||||||||||| |||||||||  |||||||| ||| ||| |||| |||| ||||||||||||||||||||||||    
T  7839351 aacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaatttatagcatatacaaaaacaa 7839447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 99 - 212
Target Start/End: Complemental strand, 23319914 - 23319799
Alignment:
Q  99 gacaattttcacaagct--tttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaa 196  Q
    |||||||||||||| ||  ||||| ||||| |||||||||||| ||| |||||| |||| |||| | ||||||||||||| |||||| | |||||| |||    
T  23319914 gacaattttcacaaactgttttttaagctttttttcacaagttttttgatatagcttataaaaacagtttatagcatatagaaaaactatttaactataa 23319815  T
Q  197 tttatcttttgctata 212  Q
    ||||||||||||||||    
T  23319814 tttatcttttgctata 23319799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 50681089 - 50681212
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatt 198  Q
    ||||||||||| ||||||||||||  ||||||||| || ||||  ||||||| ||||  ||| || ||||||||||||||||||||| ||||| ||| ||    
T  50681089 gacaattttcataagcttttttcaatttattttcataatttctccaatatagcttatataaacaacttatagcatatacaaaaacaatttaacattattt 50681188  T
Q  199 tatcttttgctataaaactagctt 222  Q
    |||||| | |||||||| ||||||    
T  50681189 tatcttatcctataaaaatagctt 50681212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 104 - 195
Target Start/End: Original strand, 53294119 - 53294210
Alignment:
Q  104 ttttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaacttta 195  Q
    |||||| ||||| |||||||||| |||||| ||||||| ||||||||||||| |||| || ||||||||||||||||||||| |||| ||||    
T  53294119 ttttcaaaagctattttcagcttgttttcataagttctctaatatagtttataaaaacaacttatagcatatacaaaaacaatttaaattta 53294210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 3155655 - 3155543
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    |||||||||||||||||  ||||||| || ||||||||| |||| |  || |||| | ||||||||||| ||||||||| |||||||||||||||| ||     
T  3155655 ttttcagcttattttcattagttcttcaagatagtttatgaaaacagcttgtagcttgtacaaaaacaatttaactttattttatcttttgctatagaaa 3155556  T
Q  217 tagcttatgcata 229  Q
    |||||||| ||||    
T  3155555 tagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 7601793 - 7601692
Alignment:
Q  135 aagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgc 234  Q
    ||||||| ||||||||||||| ||||  | | ||| ||||||||||||||| ||||||||| |||||| |||||||||  | |||||||| |||||||||    
T  7601793 aagttctctaatatagtttataaaaactactcataacatatacaaaaacaatttaactttattttatcctttgctataggaatagcttatacataagcgc 7601694  T
Q  235 tt 236  Q
    ||    
T  7601693 tt 7601692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 117 - 274
Target Start/End: Original strand, 27043848 - 27044005
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    |||| ||||||| |||| | |||||  || ||||||||| |||| |  ||||||| ||||| ||||||| ||||||||| |||||| |||| |||| ||     
T  27043848 tttttagcttatattcatacgttctccaagatagtttataaaaacatcttatagcttatacgaaaacaatttaactttattttatcctttgttatataag 27043947  T
Q  217 tagcttatgcataagcgcttgtgctataatctgcaaataatctatttatccaaacatg 274  Q
    || ||||| |||||||||| ||||||||| ||| | ||||  | ||||||||||||||    
T  27043948 taccttatacataagcgctagtgctataagctgtagataagttgtttatccaaacatg 27044005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 31076425 - 31076514
Alignment:
Q  138 ttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    ||||| ||||||| |||| |||| |||||||||||||||||||||||  ||||  ||| ||||||||||||| ||||| |||||||||||    
T  31076425 ttcttcaatatagcttataaaaacaatttatagcatatacaaaaacagtttaaacttattttatcttttgctctaaaaatagcttatgca 31076514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 50662738 - 50662868
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatt 198  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||  ||||||| ||||  ||| || |||||||||||      |||| ||||| ||| ||    
T  50662738 gacaattttcataagcttttttcaacttattttcacaatttctccaatatagcttatataaacaacttatagcatat------acaatttaacattattt 50662831  T
Q  199 tatcttttgctataaaactagcttatgcataagcgct 235  Q
    |||||| |||||||||| |||||||| ||||| ||||    
T  50662832 tatcttatgctataaaaatagcttatacataaacgct 50662868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 51630163 - 51630058
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    ||||||||||||||||| || ||||| || |||| |||| ||||||  ||||||| ||||  ||||||| ||||||||| |||||||||||||||| ||     
T  51630163 ttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatcttttgctatataaa 51630064  T
Q  217 tagctt 222  Q
    ||||||    
T  51630063 tagctt 51630058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 77 - 193
Target Start/End: Original strand, 17822843 - 17822959
Alignment:
Q  77 agaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatata 176  Q
    |||||||| || |||| |||| |||| |||||| |||||||||| |||||||||||| |||||||  || |||| |||| |||| || ||||||||||||    
T  17822843 agaacatatgaaaacagcttatgacatttttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttatagcatata 17822942  T
Q  177 caaaaacaaattaactt 193  Q
     || ||||| |||||||    
T  17822943 aaataacaatttaactt 17822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 21731657 - 21731778
Alignment:
Q  100 acaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattt 199  Q
    |||||||||| || ||||||||| |||| ||||| || ||||  ||||||| |||| |||| || |||||||| ||||||||||||| |    ||| |||    
T  21731657 acaattttcataaacttttttcaacttactttcataaattctccaatatagcttataaaaacaacttatagcacatacaaaaacaaaatg---ttacttt 21731753  T
Q  200 atcttttgctataaaactagcttat 224  Q
    |||||||||||||||| ||||||||    
T  21731754 atcttttgctataaaaatagcttat 21731778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 22030300 - 22030148
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||| ||||| || || |||| |||| ||||||||||| |||||||| |||| ||||||||| ||||||| |||| ||  || | | || || |||||||    
T  22030300 ttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttctcaggttattttcataagttctctaatttaacttgtaagaacaacttatagc 22030201  T
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||||||| ||  |||||||| |||||| ||| ||||| || |||||||||    
T  22030200 atatacaaaaataatataactttattttatccttt-ctatagaaatagcttatg 22030148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 45935291 - 45935348
Alignment:
Q  170 gcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||||||||||||||||||||| |||||| |||||||||||||||  |||||||||||    
T  45935291 gcatatacaaaaacaaattaacgttaattaatcttttgctataaacatagcttatgca 45935348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 17884120 - 17884014
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    ||||||||| ||||||| ||| |||  ||||||| |||| |||| || | ||| | ||||||||||||| ||||||||| ||||||||||| |||| ||     
T  17884120 ttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatcttttgttatagaaa 17884021  T
Q  217 tagctta 223  Q
    |||||||    
T  17884020 tagctta 17884014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 44138622 - 44138496
Alignment:
Q  106 ttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttt 205  Q
    |||||||||  ||||||||||||||||| |||||||  || || |||||| |||| || ||| ||  ||||| ||| ||| ||||||||| ||||||||     
T  44138622 ttcacaagcaattttcagcttattttcataagttctccaacatggtttatgaaaacaaattacaggctatacgaaagcaatttaactttattttatcttc 44138523  T
Q  206 tgctataaaactagcttatgcataagc 232  Q
    ||||||| ||  ||||||| |||||||    
T  44138522 tgctatagaaacagcttatacataagc 44138496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 54426142 - 54426036
Alignment:
Q  70 gcttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttata 169  Q
    |||||| ||||| || || |||| |||| ||||||||||| ||||||||||||  ||||||||| |||||||  ||||||| |||| |||| || |||||    
T  54426142 gcttgggagaacttaggaaaacagcttatgacaattttcataagcttttttcaagttattttcataagttctccaatatagattataaaaacaacttata 54426043  T
Q  170 gcatata 176  Q
     ||||||    
T  54426042 acatata 54426036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 39691159 - 39691252
Alignment:
Q  115 ttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgc 208  Q
    |||||||| |||||||||  |||||||| ||||||| |||| |||| || |||||||||||||||||  |  ||||| ||| ||||||||||||    
T  39691159 ttttttcaacttattttcgtaagttcttcaatatagcttataaaaacaacttatagcatatacaaaacaattttaacattattttatcttttgc 39691252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 9760484 - 9760384
Alignment:
Q  125 ttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttat 224  Q
    ||||||||| |||||||  ||||||| |||| |||| || |||||||||||  ||||| || ||||||||| |||||||||| | |||||| || |||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaacaacttatagcatattaaaaaagaatttaactttattttatctttttcaataaaaataacttat 9760385  T
Q  225 g 225  Q
    |    
T  9760384 g 9760384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 19494914 - 19494858
Alignment:
Q  169 agcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||||||||||||| ||| ||||| |||||| ||||||||| ||||||||||||    
T  19494914 agcatatacaaaaacaatttagctttattttatcatttgctatagaactagcttatg 19494858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 272
Target Start/End: Complemental strand, 25885876 - 25885756
Alignment:
Q  152 ttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgca 251  Q
    |||| |||| || ||||||| || || ||||||| ||||||||| |||||||||||||||| ||  |||| || |||||| | ||| ||| ||| |||||    
T  25885876 ttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatcttttgctatagaaagagctaatacataagtgtttgcgctgtaagctgca 25885777  T
Q  252 aataatctatttatccaaaca 272  Q
    |||||  | ||||||||||||    
T  25885776 aataagttgtttatccaaaca 25885756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 25904276 - 25904336
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||||| |||||||| ||| ||||||||| ||||||||||||| ||||| |||||||||    
T  25904276 ttatagcaaatacaaaatcaatttaactttattttatcttttgctgtaaaaatagcttatg 25904336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 28300317 - 28300405
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttt 205  Q
    |||||| |||||||||| ||| |||| || ||||  ||| |||||| |||||||| ||||||||||||| ||||||||| ||| |||||    
T  28300317 ttttcaacttattttcataagctcttcaagatagcctatgaaaatagtttatagcttatacaaaaacaatttaactttattttttcttt 28300405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 40174615 - 40174503
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    |||||| |||||| |||||||||||  ||| ||| |||| |||| |  ||||||| | ||  ||||||| ||||||||||||||| ||||||||||||      
T  40174615 ttttcaacttattatcacaagttctccaatgtagcttatgaaaacagcttatagcttttatgaaaacaatttaactttaatttattttttgctataaa-- 40174518  T
Q  217 tagcttatgcataag 231  Q
    |||||||| ||||||    
T  40174517 tagcttatacataag 40174503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 15177204 - 15177330
Alignment:
Q  101 caattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattta 200  Q
    ||||||||| ||| ||||||||  | |||||||  |||||| || ||||| |||| ||||  | |||||||| ||| || ||||| ||||| ||| ||||    
T  15177204 caattttcataagtttttttcaaatgattttcattagttctctagtatagcttataaaaaccacttatagcacatagaagaacaatttaacgttatttta 15177303  T
Q  201 tcttttgctataaaactagcttatgca 227  Q
    ||||| ||||| ||| |||||||||||    
T  15177304 tctttagctattaaaatagcttatgca 15177330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 437245 - 437342
Alignment:
Q  100 acaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaat 197  Q
    ||||||||| ||||||||| |||||||||||||| || ||||  |||||||||||| |||| |  | ||| || || |||||| || |||||||||||    
T  437245 acaattttcccaagcttttctcagcttattttcataaattctccaatatagtttataaaaacagctcataacacatgcaaaaataatttaactttaat 437342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 43505947 - 43505898
Alignment:
Q  178 aaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||||||| ||||| ||| ||||||||||||||||||| |||||||||||    
T  43505947 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgca 43505898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 117 - 270
Target Start/End: Original strand, 54392837 - 54392989
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    |||||| |||||||||| || ||||  || |||  ||||||||| |  | ||||||||||||||||||| |||||||| |||||| ||||  |||| ||     
T  54392837 ttttcaacttattttcaaaatttctccaagatatcttattaaaacagctaatagcatatacaaaaacaatttaacttt-atttattttttattatagaaa 54392935  T
Q  217 tagcttatgcataagcgcttgtgctataatctgcaaataatctatttatccaaa 270  Q
    |||||||| |||||| |  |||||||||| | | ||||||  | ||||||||||    
T  54392936 tagcttatacataagtgtgtgtgctataagcggtaaataagttgtttatccaaa 54392989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 33586951 - 33587082
Alignment:
Q  95 ttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaacttt 194  Q
    |||||||||| |||| |||||||| | | |||||||||| |||||||   |||||| |||| |||| ||  |||| |||||||||||||   | ||| ||    
T  33586951 ttaagacaatattcataagcttttcttaacttattttcataagttctccgatatagcttataaaaacaacctataacatatacaaaaac-gttcaacgtt 33587049  T
Q  195 aatttatcttttgctataaaactagcttatgca 227  Q
      ||||||||| ||||||||| |||||||||||    
T  33587050 gttttatctttcgctataaaaatagcttatgca 33587082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 44797903 - 44797828
Alignment:
Q  152 ttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||| |||| || ||||||| || |||||| ||| ||||| ||  ||||||||||||||||||| |||||||||||    
T  44797903 ttataaaaacaacttatagcgtacacaaaatcaatttaacgttgttttatcttttgctataaaaatagcttatgca 44797828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 42404068 - 42404181
Alignment:
Q  169 agcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca----------taagcgcttgtgctataatctgcaaataatc 258  Q
    ||||| ||||||||||| ||||| ||| |||||||||||||||||||  ||| ||||||          |||| |||||||||||||  ||||||||| |    
T  42404068 agcatgtacaaaaacaatttaacattattttatcttttgctataaaaagagcgtatgcaaacttatacataagtgcttgtgctataaggtgcaaataagc 42404167  T
Q  259 tatttatccaaaca 272  Q
    |||| |||||||||    
T  42404168 tattcatccaaaca 42404181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 42685470 - 42685384
Alignment:
Q  123 gcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgct 209  Q
    ||||||||||||| |||||  || |||| |||| |||| || ||| ||| |||| |||||||| ||||||| | |||||||||||||    
T  42685470 gcttattttcacacgttctccaaaatagcttatgaaaacaacttagagcttataaaaaaacaatttaacttcattttatcttttgct 42685384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 55302329 - 55302279
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagtt 139  Q
    |||| |||| ||||||||||  ||||||||||||||||||||||| |||||    
T  55302329 aacagcttatgacaattttcgtaagcttttttcagcttattttcataagtt 55302279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 437453 - 437566
Alignment:
Q  120 tcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctat-aaaacta 218  Q
    |||||||||||||| |||  || ||| |||| |||| |||| || ||| | | ||||  || |||| ||||||||| ||||||||||||||| |||| ||    
T  437453 tcagcttattttcataaggcctctaaaatagcttatgaaaacaacttaaaacttatatgaacacaatttaactttattttatcttttgctataaaaaata 437552  T
Q  219 gcttatgcataagc 232  Q
    |||||| |||||||    
T  437553 gcttatacataagc 437566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 13126549 - 13126618
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttct 141  Q
    |||||||||| ||  | |||| |||| |||| || ||| ||||||||||||||||||||||| |||||||    
T  13126549 ttggaagaacttataaaaacagcttatgacatttatcataagcttttttcagcttattttcataagttct 13126618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 14011292 - 14011179
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    ||||| |||||||||||||| || ||| |||  || |||| ||||  ||| | ||| |||| |||| | || ||| ||| ||||| ||||||||||| ||    
T  14011292 aagctgttttcagcttatttccataagctctccaagatagcttatgtaaacattttgtagcttatatataaccaatttacctttattttatcttttgtta 14011193  T
Q  211 taaaactagcttat 224  Q
    ||||||||||||||    
T  14011192 taaaactagcttat 14011179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 17204139 - 17204082
Alignment:
Q  168 tagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||||||||||||||  |||||||| |||| | ||||||||||||  ||||||||    
T  17204139 tagcatatacaaaaacaatataactttattttaacatttgctataaaaacagcttatg 17204082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 25332827 - 25332750
Alignment:
Q  117 ttttcagcttattttcacaagttct-ttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    ||||||||||||||||| |||||||  ||| |||| |||| ||||||  ||| ||| ||||||||||||| |||||||    
T  25332827 ttttcagcttattttcataagttctgataagatagcttataaaaatagcttagagcttatacaaaaacaatttaactt 25332750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 49004025 - 49004107
Alignment:
Q  152 ttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    |||| ||||||| |||||||  |||| ||||||| |||||| |  |||||||||||||||| || | |||||| |||||||||||    
T  49004025 ttatgaaaataagttatagctaatacgaaaacaatttaactat--tttatcttttgctatagaaattgcttatacataagcgctt 49004107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 4212885 - 4212813
Alignment:
Q  200 atcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    |||||||||  || || |||||||| ||||| |||||||||||||| ||| ||||||  | ||||||||||||    
T  4212885 atcttttgcagtagaaatagcttatacataatcgcttgtgctataagctgaaaataagttgtttatccaaaca 4212813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 36409892 - 36409844
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataa 213  Q
    ||||| ||||||| |||||||| ||||||| |||||| |||||||||||    
T  36409892 ttataacatatactaaaacaaactaactttcatttatattttgctataa 36409844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 36424058 - 36424010
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataa 213  Q
    ||||| ||||||| |||||||| ||||||| |||||| |||||||||||    
T  36424058 ttataacatatactaaaacaaactaactttcatttatattttgctataa 36424010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 99 - 210
Target Start/End: Complemental strand, 13810068 - 13809957
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatt 198  Q
    ||||||||||| ||| |||| | |||||||||||||||||||| ||||||||||||| |||| ||| |||||||||||||||||||| ||||||||| ||    
T  13810068 gacaattttcaaaagtttttcttagcttattttcacaagttctctaatatagtttataaaaacaatatatagcatatacaaaaacaatttaactttattt 13809969  T
Q  199 tatcttttgcta 210  Q
    ||||||||||||    
T  13809968 tatcttttgcta 13809957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 14576644 - 14576765
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||| |||| || ||||||||||||||||||||| ||    
T  14576644 aacagcttatgacaattttcaaaagcttttttcagcttattttca-aagttctctaatatagcttataaaaaaaaattatagcatatacaaaaacaattt 14576742  T
Q  189 aactttaatttatcttttgctat 211  Q
    ||||||| |||||| ||| ||||    
T  14576743 aactttattttatcctttactat 14576765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 47432162 - 47432040
Alignment:
Q  102 aattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttat 201  Q
    |||||||||||||||||||||||||||||||| || ||||| ||||||  |||| |||| |  ||||||||||| ||||||||| ||||||||| |||||    
T  47432162 aattttcacaagcttttttcagcttattttcataaattcttcaatataacttat-aaaacaccttatagcatattcaaaaacaatttaactttattttat 47432064  T
Q  202 cttttgctataaaactagcttatg 225  Q
    ||||| |||||||| |||||||||    
T  47432063 ctttttctataaaaatagcttatg 47432040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 24915041 - 24915177
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| |||| |||||| |||||||||||| ||||||||||||||||||  || | || |||| |||| |  ||||||||||||||||||||| ||    
T  24915041 aacaacttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaaacaattt 24915140  T
Q  189 aactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||| |||||||| ||||||| || ||| |||||    
T  24915141 aactttattttatcttctgctatagaaatagtttatg 24915177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 77 - 224
Target Start/End: Original strand, 17603362 - 17603512
Alignment:
Q  77 agaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatata 176  Q
    ||||| ||||| |||| |||| ||||||||||| || |||||| || |||||||||| |||||||  ||||||| |||| |||| || ||||||||||||    
T  17603362 agaacttacgaaaacagcttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagcttataaaaacaacttatagcatata 17603461  T
Q  177 caaaaacaaattaactttaattt---atcttttgctataaaactagcttat 224  Q
    ||||||||| ||||| ||| |||   ||||||| ||| |||| ||||||||    
T  17603462 caaaaacaatttaacgttattttttaatctttttctacaaaaatagcttat 17603512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 49938844 - 49938734
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||| ||||| || || |||| |||| ||||||||||| |||||||||||| |||||||||| ||||||| |||||||| |||| |||| || ||||| |    
T  49938844 ttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaacttattttcataagttctctaatatagcttataaaaacaacttataac 49938745  T
Q  172 atatacaaaaa 182  Q
    |||||||||||    
T  49938744 atatacaaaaa 49938734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 37517206 - 37517321
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    |||||| |||| | |||||||||  |||||| |||||||| |||||||||||| |||||  |||||||||||||| ||||||||| ||||| ||||| ||    
T  37517206 aagcttctttcggtttattttcaggagttctctaatatagcttattaaaataacttataatatatacaaaaacaatttaactttattttatattttggta 37517305  T
Q  211 taaaactagcttatgc 226  Q
    || || || |||||||    
T  37517306 tagaaataacttatgc 37517321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 225
Target Start/End: Original strand, 37631559 - 37631685
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatt 198  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||| |||  |||| |  | ||| |||| |||||||||| ||| ||| | ||    
T  37631559 gacaattttcacaagcttttttcagcttattttcataagttctccaatatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattt 37631658  T
Q  199 tatcttttgctataaaactagcttatg 225  Q
    |||||||  |||||||  |||||||||    
T  37631659 tatctttctctataaagatagcttatg 37631685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 42174930 - 42174799
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| ||||||||||| ||||| |||| | |||||||||| |||||||  ||||||  |||| |||| || |||||||||||||||||||   ||||| |    
T  42174930 cttatgacaattttcataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatagcatatacaaaaac--tttaacat 42174833  T
Q  194 taatttatcttttgctataaaactagcttatgca 227  Q
    || ||||||||||| ||||||| |||| ||||||    
T  42174832 tactttatcttttgatataaaaatagcctatgca 42174799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 473233 - 473124
Alignment:
Q  100 acaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattt 199  Q
    |||||||||| |||||||||||| |||||||||| |||||||  |||| |  |||| |||| || |||||||||| || ||||||| ||||||||| |||    
T  473233 acaattttcataagcttttttcaacttattttcataagttctccaatagaacttataaaaacaacttatagcatacacgaaaacaatttaactttatttt 473134  T
Q  200 atcttttgct 209  Q
    | ||||||||    
T  473133 accttttgct 473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 2294969 - 2294824
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    ||||| |||||| |||||||||  |||||||  || ||||||||| ||||||  ||||||| ||| ||||||||| |||||||||  | ||| ||| |||    
T  2294969 aagctgttttcaccttattttcgtaagttctccaagatagtttatgaaaatagcttatagcttatccaaaaacaatttaactttatatgatcatttccta 2294870  T
Q  211 taaaactagcttatgcataagcgcttgtgctataatctgcaaataa 256  Q
    ||||| || ||||| ||||||||||| ||| |||| | ||||||||    
T  2294869 taaaaataccttattcataagcgcttatgccataagcagcaaataa 2294824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 94 - 215
Target Start/End: Original strand, 41184645 - 41184766
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| ||||||||||| ||| |||||||| |||||||||| ||||| |  ||||| || ||| |||  || |||||  |||||||||||||| ||||| |    
T  41184645 cttatgacaattttcataagtttttttcaacttattttcataagttttccaatatggtatataaaaccaaattataatatatacaaaaacaatttaacat 41184744  T
Q  194 taatttatcttttgctataaaa 215  Q
    || |||||||||||||||||||    
T  41184745 tattttatcttttgctataaaa 41184766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 51929529 - 51929653
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||||| |||||||||||| ||||||| || |||||||  |||||||||||| |||| |  |||  ||||||| |||||||| ||    
T  51929529 aacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaacagcttaaggcatatataaaaacaattt 51929628  T
Q  189 aactttaatttatcttttgctataa 213  Q
     || ||  |||||||||||||||||    
T  51929629 tacattggtttatcttttgctataa 51929653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 41195205 - 41195320
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaat-ttatcttttgct 209  Q
    ||||||||||||||||||||||| |||||||  || ||||||||| |||| | || |||| |||||||||||||  |||||||| || ||||| ||| ||    
T  41195205 aagcttttttcagcttattttcataagttctccaagatagtttatgaaaacagttgatagtatatacaaaaacagtttaacttttatgttatcatttact 41195304  T
Q  210 ataaaactagcttatg 225  Q
    |||||| ||| |||||    
T  41195305 ataaaaatagtttatg 41195320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 29904819 - 29904704
Alignment:
Q  101 caattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattta 200  Q
    ||||||||| |||||||||||| |||||||||| ||||||| ||||||||||||| ||| ||| ||| |||        |||||  |||| |||| ||||    
T  29904819 caattttcaaaagcttttttcaccttattttcataagttctataatatagtttataaaattaacttacagc--------aaacattttaaatttatttta 29904728  T
Q  201 tcttttgctataaaactagcttat 224  Q
    ||||||||||||||| ||||||||    
T  29904727 tcttttgctataaaaatagcttat 29904704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 99 - 225
Target Start/End: Complemental strand, 17830220 - 17830098
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatt 198  Q
    |||| |||||| |||||||||||| |||||||||| ||||||   || || |  ||| ||||||| || ||||||||||||||| |  ||||||||| ||    
T  17830220 gacatttttcataagcttttttcaacttattttcaaaagttc---aagattgcatatgaaaataacttgtagcatatacaaaaatag-ttaactttattt 17830125  T
Q  199 tatcttttgctataaaactagcttatg 225  Q
    |||| |||||||||||| |||||||||    
T  17830124 tatcatttgctataaaaatagcttatg 17830098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 3234020 - 3234107
Alignment:
Q  104 ttttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaac 191  Q
    |||||| ||| |||||||  |||||||||| |||||||  ||||||| |||| |||| || ||||||||||||||||||||| |||||    
T  3234020 ttttcataagtttttttctacttattttcataagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaatttaac 3234107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 15477645 - 15477535
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||| |||||||             | ||||||||||||||||||||| ||    
T  15477645 aacagcttatgacaattttcaaaagcttttttcagcttatattcataagttctctaatata-------------acttatagcatatacaaaaacaattt 15477559  T
Q  189 aactttaatttatcttttgctata 212  Q
    ||||||| |||||||||| |||||    
T  15477558 aactttattttatcttttactata 15477535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 34290288 - 34290201
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatctt 204  Q
    ||||||||||||||||| |||||||| || |||| |||| |||| |  ||||||| |||||||||  |||||||||||| ||||||||    
T  34290288 ttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttatacaaaataaaattaactttattttatctt 34290201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 272
Target Start/End: Original strand, 34619445 - 34619552
Alignment:
Q  166 tatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaa-taatctattta 264  Q
    |||||| ||||||||||||| ||||| ||| ||||||||||| |||| || | |||||| |||||||  || |||||||| ||||||| ||| || ||||    
T  34619445 tatagcttatacaaaaacaatttaaccttattttatcttttgttatagaaatggcttatacataagcaattatgctataagctgcaaattaagctgttta 34619544  T
Q  265 tccaaaca 272  Q
    ||||||||    
T  34619545 tccaaaca 34619552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 1510312 - 1510437
Alignment:
Q  101 caattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattta 200  Q
    ||||||||| |||||||||||| |||||||||  |||||||  |||| || |||| |||| || ||||| | ||||||||||||| | ||| || |||||    
T  1510312 caattttcataagcttttttcaacttattttcgtaagttctccaatagagcttataaaaacaacttataacctatacaaaaacaattgaacatt-attta 1510410  T
Q  201 tcttttgctataaaactagcttatgca 227  Q
    ||||||| | ||||| |||||| ||||    
T  1510411 tcttttgttttaaaaatagcttttgca 1510437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 6557025 - 6556947
Alignment:
Q  115 ttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||||| |||||||| ||| |||||||||||||||  |||| |||| || ||||| ||||||||||||||| |||||||    
T  6557025 tttttttagcttattgtcataagttctttaatataacttataaaaacaacttataacatatacaaaaacaatttaactt 6556947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 36070267 - 36070165
Alignment:
Q  152 ttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgca 251  Q
    |||| |||| || ||||||| ||| | || |||| ||||||||| ||||||||||| ||||||| ||||  || ||||||||||| |||||||| |||||    
T  36070267 ttatgaaaacaacttatagcttatccgaagacaatttaactttattttatcttttgttataaaaatagcccatacataagcgcttatgctataagctgca 36070168  T
Q  252 aat 254  Q
    |||    
T  36070167 aat 36070165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 30582017 - 30582074
Alignment:
Q  168 tagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||||| || ||||||    
T  30582017 tagcatatacaaaaacaagttaactttattttatctttttctataaaaataccttatg 30582074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 45145226 - 45145165
Alignment:
Q  169 agcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataa 230  Q
    ||||||||||||||||| ||||  ||| ||||||||||||||||||| |||||||| |||||    
T  45145226 agcatatacaaaaacaatttaatattattttatcttttgctataaaaatagcttatacataa 45145165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 2295193 - 2295078
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||| ||||| || || |||| |||| ||||||||||| ||||| | |||| |||||||||||||||||| | |||||| |||| ||||||     ||||    
T  2295193 ttgggagaacttatgaaaacagcttatgacaattttcataagctctattcaacttattttcacaagttctctgatatagcttataaaaata---gctagc 2295097  T
Q  172 atatacaaaaacaaattaa 190  Q
    |||||||||||||| ||||    
T  2295096 atatacaaaaacaatttaa 2295078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 225
Target Start/End: Complemental strand, 27976679 - 27976539
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcac---------aagttctttaatatagtttattaaaataatttatagcatatacaaaaaca 184  Q
    |||| |||| |||||| |||||||||||||||||||||||          |||||||  || |||| |||| |||| || ||||||||||||||||||||    
T  27976679 cttatgacatttttcataagcttttttcagcttattttcattatttcattaagttctcgaagatagcttatgaaaacaacttatagcatatacaaaaaca 27976580  T
Q  185 aattaactttaatttatcttttgctataaaactagcttatg 225  Q
    | ||||||||  |  ||| |||||||||||| |||||||||    
T  27976579 atttaactttgttcaatcatttgctataaaaatagcttatg 27976539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 37842373 - 37842485
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    ||||||||||||||| | |||||||| || |||| |||| |||| || ||||||| ||| | || |||  ||||||||| || ||||||||||||| ||     
T  37842373 ttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttattcgaacacagtttaactttatttcatcttttgctatagaaa 37842472  T
Q  217 tagcttatgcata 229  Q
    |||||||| ||||    
T  37842473 tagcttatacata 37842485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 4576855 - 4576741
Alignment:
Q  119 ttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaacta 218  Q
    ||||||||||||||| ||||| || ||||||| |||| |||| |  ||||| | | |||||||| |  ||||||||| || |||||||| |||||||  |    
T  4576855 ttcagcttattttcataagttattcaatatagcttatgaaaacagcttataacttgtacaaaaatattttaactttatttaatcttttgttataaaa-aa 4576757  T
Q  219 gcttatgcataagcgc 234  Q
    ||||||||||||||||    
T  4576756 gcttatgcataagcgc 4576741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 6102142 - 6102059
Alignment:
Q  173 tatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataa 256  Q
    |||||||||||||  |||||| | ||| |||||| ||||  || |||||||| | |||||||||||||||||| ||||||||||    
T  6102142 tatacaaaaacaatctaacttcactttttctttttctatcgaaatagcttatccgtaagcgcttgtgctataagctgcaaataa 6102059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 7028288 - 7028229
Alignment:
Q  173 tatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagc 232  Q
    ||||||||||||| ||||||||| |||||||||||||||| || ||| |||| |||||||    
T  7028288 tatacaaaaacaacttaactttattttatcttttgctatagaaatagtttatacataagc 7028229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 30581859 - 30581741
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    ||||| |||||| |||||||||| ||| ||   ||||| | |||| |||| || |||||||||||| |||||||| ||||||||| || ||| ||| |||    
T  30581859 aagctgttttcaacttattttcataagctcccaaatatggcttataaaaa-aacttatagcatataaaaaaacaatttaactttatttcatcgttttcta 30581761  T
Q  211 taaaactagcttatgcataa 230  Q
    ||||| ||||||||| ||||    
T  30581760 taaaaatagcttatgtataa 30581741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 196 - 279
Target Start/End: Complemental strand, 38189732 - 38189649
Alignment:
Q  196 atttatcttttgctataaaactagcttatgcataagcg--cttgtgctataatctgcaaataatctatttatccaaacatgatcta 279  Q
    ||||||||||||||||| || |||||||||  |||||   |||||||||||| ||||||||||  | |||||||||||||||||||    
T  38189732 atttatcttttgctatagaaatagcttatg--taagcttacttgtgctataaactgcaaataagttgtttatccaaacatgatcta 38189649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 49888824 - 49888705
Alignment:
Q  112 agcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctat 211  Q
    |||| ||||| ||||||||||| ||||||| ||| |||| |||| |||| || | ||||| ||||| ||||||| | ||||||| |||||||||| | |     
T  49888824 agctattttcggcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatctttttccaa 49888725  T
Q  212 aaaactagcttatgcataag 231  Q
    | || |||||||| ||||||    
T  49888724 agaaatagcttatacataag 49888705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 9572174 - 9572244
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgct 235  Q
    ||||||| ||||||||| ||| ||||||||| |||||||||||||||| || ||||| || ||| ||||||    
T  9572174 ttatagcttatacaaaagcaatttaactttattttatcttttgctatagaaatagctaatacattagcgct 9572244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 33186283 - 33186202
Alignment:
Q  152 ttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcg 233  Q
    |||| |||| || ||||||||||||||| || || ||||||||  |||||| ||||||||| ||  ||||||||||||||||    
T  33186283 ttataaaaacaacttatagcatatacaagaaaaatttaactttcttttatcctttgctatagaaagagcttatgcataagcg 33186202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 36872806 - 36872675
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| ||||||||| | ||||||||| || |||||||||| |||||||  ||||||| || | |||| || |||||||| |||||||||||| | |||      
T  36872806 cttatgacaattttgataagcttttt-caacttattttcataagttctgcaatatagcttgtaaaaacaacttatagcacatacaaaaacaact-aacag 36872709  T
Q  194 taatttatcttttgctataaaactagcttatgca 227  Q
    |  ||||| |||||| |||||| |||||||||||    
T  36872708 ttttttattttttgcaataaaaatagcttatgca 36872675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 41195348 - 41195393
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||    
T  41195348 ataagcgcttgtgctataagctgcaaataagttatttatccaaaca 41195393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 43722405 - 43722470
Alignment:
Q  189 aactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaat 254  Q
    ||||||| |||||||| || |||| || |||||||| |||||||||||||||||||| || |||||    
T  43722405 aactttattttatcttctgttatataaatagcttatacataagcgcttgtgctataagctacaaat 43722470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 836387 - 836463
Alignment:
Q  147 atagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagctta 223  Q
    |||| |||| ||||||| ||||||| ||||||||||||| |||  |||| |||||||||  |||||||| |||||||    
T  836387 atagcttataaaaataacttatagcttatacaaaaacaatttagttttattttatctttcactataaaaatagctta 836463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 37769676 - 37769776
Alignment:
Q  115 ttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaa 214  Q
    |||||||||||| |||||| || ||||  || | || |||| |||| || || ||||||| ||||||| || ||||||||| |||||| |||||||||||    
T  37769676 ttttttcagcttgttttcataaattctgcaagacagcttataaaaacaacttgtagcataaacaaaaataatttaactttattttatcatttgctataaa 37769775  T
Q  215 a 215  Q
    |    
T  37769776 a 37769776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 39976239 - 39976323
Alignment:
Q  125 ttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgct 209  Q
    ||||||||| ||||||   || |||| |||| |||||| | |||||| |||||| |||||||| ||||||| |||||||||||||    
T  39976239 ttattttcataagttccccaaaatagcttatgaaaatagtgtatagcttatacagaaacaaatcaactttattttatcttttgct 39976323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 40977403 - 40977487
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataa-tttatagcatatacaaaaa 182  Q
    ||||||||||| ||||||||| ||||||||||||| | ||||| | |||| | |||| ||| |||  ||||||||||||||||||    
T  40977403 gacaattttcaaaagctttttccagcttattttcatatgttctcttatatggcttataaaattaaccttatagcatatacaaaaa 40977487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 49938714 - 49938619
Alignment:
Q  187 ttaactttaatttatcttttgctataaaactagcttatg----------cataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    |||||||||||||||| ||||||||| || |||||||||          |||||||||||||||||||| ||||| |||| || ||||||||||||    
T  49938714 ttaactttaatttatcctttgctatagaaatagcttatgtgagcttatacataagcgcttgtgctataagctgcagataagctttttatccaaaca 49938619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 4700084 - 4700203
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    ||||||||||||||||| ||| |||  |  ||||||||| |||| | |||||||| |||||  |||  || |||||||| ||||||||||| |||| ||     
T  4700084 ttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagcttatacggaaatgaagtaactttattttatcttttgttatagaaa 4700183  T
Q  217 tagcttatgcataagcgctt 236  Q
    |||||| | |||||| ||||    
T  4700184 tagcttgtacataagtgctt 4700203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 30191996 - 30191937
Alignment:
Q  165 ttatagcatataca-aaaacaaattaactttaatttatcttttgctataaaactagctta 223  Q
    ||||||||||| || |||| |||||||||||| ||||| ||||||||||||| |||||||    
T  30191996 ttatagcatatgcacaaaataaattaactttattttattttttgctataaaaatagctta 30191937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 37473402 - 37473343
Alignment:
Q  166 tatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||||||||| |||| | ||||||||  |||||| |||||||||||| |||||||||    
T  37473402 tatagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatg 37473343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 44932002 - 44932060
Alignment:
Q  166 tatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||||||||||||||||||| |||||||   ||||||||||||||||||  ||| |||||||    
T  44932002 tatagcatatacaaaaacaatttaactt---tttatcttttgctataaatatagtttatgca 44932060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 488976 - 488898
Alignment:
Q  194 taatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    ||||||| ||||  ||||| || |||||||| ||||||| |||||||||||| || |||||||  |||| |||||||||    
T  488976 taatttaactttcactatagaaatagcttatacataagcacttgtgctataagcttcaaataagttattaatccaaaca 488898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 7107518 - 7107603
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaa 185  Q
    |||| |||||| |||||||| |||||||||| ||| |||||||  || |||||| ||  ||| | ||||||||||||||||||||||    
T  7107518 gacatttttcataagctttt-tcagcttattgtcataagttctacaaaatagttaatggaaacagtttatagcatatacaaaaacaa 7107603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 26678907 - 26678845
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    ||||||||| |||| ||||||  |||||||| ||||||||||||| ||||| ||| |||||||    
T  26678907 ttatagcatttacataaacaatgtaactttattttatcttttgctgtaaaaatagtttatgca 26678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 30286509 - 30286650
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc-atatacaaaaacaaat 187  Q
    |||| |||| ||||||||||| |||||||||||| || | |||    ||||||| || |||| |||| |||| || ||||||| | |||||||||||| |    
T  30286509 aacagcttatgacaattttcataagcttttttcaactaaattttcttagttcttcaaaatagcttataaaaacaacttatagcaacatacaaaaacaatt 30286608  T
Q  188 taac--tttaatttatcttttgctataaaactagcttatgca 227  Q
    ||||  | |  ||||||||||||||||||| || ||||||||    
T  30286609 taacgttcttgtttatcttttgctataaaaataacttatgca 30286650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 37517143 - 37517205
Alignment:
Q  76 aagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagt 138  Q
    |||||| ||||| |||| |||| ||||||||||| ||||||||||||  ||||||||| ||||    
T  37517143 aagaacttacgaaaacagcttatgacaattttcaaaagcttttttcaatttattttcataagt 37517205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 41505604 - 41505558
Alignment:
Q  226 cataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    |||||||| ||||||||||| |||||||||| || ||||||||||||    
T  41505604 cataagcgtttgtgctataagctgcaaataagctgtttatccaaaca 41505558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 41505720 - 41505631
Alignment:
Q  135 aagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||||  ||||||| |||| |||| |  ||||| ||||||| ||||||| |||||||||||||| | ||| |||||||| |||||||||    
T  41505720 aagttctccaatatagcttataaaaacagcttataacatatacgaaaacaatttaactttaattta-cgttttctataaaaatagcttatg 41505631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 14385806 - 14385879
Alignment:
Q  142 ttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaa 215  Q
    ||||||||| |||  |||| || ||||| || |||||||||||| ||||| ||| | |||||||||||||||||    
T  14385806 ttaatatagcttacaaaaacaacttataacagatacaaaaacaatttaacattattctatcttttgctataaaa 14385879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 272
Target Start/End: Complemental strand, 38001636 - 38001502
Alignment:
Q  136 agttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgct 235  Q
    ||||||| || |||| |||| |||| |  |||| || |||| |||||||| |||||| |  |||||||||||||||  || ||| |||  |||||| |||    
T  38001636 agttcttcaagatagcttatgaaaacaccttatggcttatataaaaacaacttaactat--tttatcttttgctatggaaatagattacacataagtgct 38001539  T
Q  236 tgtgctataatctgcaaataatctatttatccaaaca 272  Q
    | || |||||||||||||||| ||  |||||||||||    
T  38001538 tatgttataatctgcaaataaactgattatccaaaca 38001502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 51190857 - 51190808
Alignment:
Q  173 tatacaaaaacaaattaactttaatttatcttttgctataaaactagctt 222  Q
    ||||||||||||| ||||||||| ||||||||||||| || || ||||||    
T  51190857 tatacaaaaacaatttaactttattttatcttttgctttacaaatagctt 51190808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 197 - 272
Target Start/End: Original strand, 33527245 - 33527321
Alignment:
Q  197 tttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgc-aaataatctatttatccaaaca 272  Q
    ||||||||||| | || || |||||||| ||||||||||| |||| ||| |||| |||||| || ||||||||||||    
T  33527245 tttatcttttgttttagaaatagcttattcataagcgcttatgctctaagctgcaaaataagctgtttatccaaaca 33527321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 34952267 - 34952155
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    ||||||||||||||||| ||||||| |   |||| |||| |||| || ||| ||| ||| | ||||||| ||||||||| |||| ||| |||| || ||     
T  34952267 ttttcagcttattttcataagttctctttgatagcttatgaaaacaacttacagcttattcgaaaacaatttaactttattttaacttctgctctagaaa 34952168  T
Q  217 tagcttatgcata 229  Q
    |||||||| ||||    
T  34952167 tagcttatacata 34952155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 37473483 - 37473431
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttct 141  Q
    |||| |||| |||| |||||| ||||||||| ||||||||||||| |||||||    
T  37473483 aacaacttatgacatttttcataagctttttccagcttattttcataagttct 37473431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 43990159 - 43990119
Alignment:
Q  232 cgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    |||||||||||||| |||||||||  |||||||||||||||    
T  43990159 cgcttgtgctataaactgcaaatacgctatttatccaaaca 43990119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 12464479 - 12464599
Alignment:
Q  105 tttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatctt 204  Q
    |||||||||||||||||||||||||||||||||||||  || |||| |||| ||||||  ||||||||||||||||||||| ||||||||| ||||||||    
T  12464479 tttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaactttattttatctt 12464578  T
Q  205 ttgctataaaactagcttatg 225  Q
    || ||| | || |||||||||    
T  12464579 tttctacagaaatagcttatg 12464599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 43279519 - 43279655
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||||| |||||||||||| ||||||||||||||||||  ||||||| |||| |||| || |||||||  |||||||||||| ||    
T  43279519 aacagcttatgacaattttcataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaacttatagc--atacaaaaacaattt 43279616  T
Q  189 aactttaatttatcttttgctataaaactagcttatgca 227  Q
     || ||| ||||||||||| ||||||| |||||||||||    
T  43279617 cacattattttatcttttgatataaaaatagcttatgca 43279655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 32592661 - 32592529
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| ||||||||||| |||||||| ||| |||||||||| |||||||  ||||| | |||| |||| || ||||||| ||||| ||||||| ||||| |    
T  32592661 cttacgacaattttcataagcttttctcaacttattttcataagttctccaatattgcttataaaaacaacttatagcgtatac-aaaacaatttaacat 32592563  T
Q  194 taatttatcttttgctataaaactagcttatgca 227  Q
    || |||||||||| |||||||| ||| |||||||    
T  32592562 tattttatctttttctataaaaatagtttatgca 32592529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 39073684 - 39073796
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| ||||||||||| ||| ||  |||| ||||||||||| ||||||  ||||||| |||| ||||| | ||||||||||||||||||||| ||||| |    
T  39073684 cttatgacaattttcataagtttcgttcaacttattttcactagttctccaatatagcttataaaaattacttatagcatatacaaaaacaatttaacgt 39073783  T
Q  194 taatttatctttt 206  Q
    || ||||||||||    
T  39073784 tattttatctttt 39073796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 33319824 - 33319939
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaat-ttatcttttgct 209  Q
    ||||||||||||||||||||||| |||||||  || ||||||||| |||| | ||||||| |||||||||||||  |||||||| || ||||| ||| ||    
T  33319824 aagcttttttcagcttattttcataagttctccaagatagtttatgaaaacagtttatagtatatacaaaaacagtttaacttttatgttatcatttact 33319923  T
Q  210 ataaaactagcttatg 225  Q
    |||||| ||| |||||    
T  33319924 ataaaaatagtttatg 33319939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 86 - 227
Target Start/End: Complemental strand, 26202111 - 26201970
Alignment:
Q  86 gagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaa 185  Q
    ||||||| |||| ||||||||||| |||||||||||| |||||||||| |||||||  ||||||  |||| |||| || ||||||||  ||| | | |||    
T  26202111 gagaacaacttatgacaattttcataagcttttttcaacttattttcataagttctccaatatatcttataaaaacaacttatagca-gtacgagaccaa 26202013  T
Q  186 attaactttaatttatct-tttgctataaaactagcttatgca 227  Q
     ||||| ||| ||||||| |||||||||||| |||||||||||    
T  26202012 tttaacgttattttatctctttgctataaaaatagcttatgca 26201970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 15757653 - 15757762
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatac-aaaaacaaattaact 192  Q
    |||| ||||||||||| ||||||||||||||||||||||| | ||||| |  ||||| |||| || | || ||||||||||||| |||||||| ||||||    
T  15757653 cttatgacaattttcagaagcttttttcagcttattttcatacgttctcttgtatagcttataaatacaacttatagcatatacaaaaaacaatttaact 15757752  T
Q  193 ttaatttatc 202  Q
    ||| ||||||    
T  15757753 ttattttatc 15757762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 41851615 - 41851492
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| |||| |||||| |||||||| |||||||| ||||| || ||||  || |||| || | |||| || ||||||||||||||||||||| ||    
T  41851615 aacaacttatgacacttttcataagcttttctcagcttaatttcataaattctccaagatagcttctgaaaacaacttatagcatatacaaaaacaattt 41851516  T
Q  189 aactttaatttatcttttgctata 212  Q
    ||||||| | |||||||| |||||    
T  41851515 aactttattgtatcttttcctata 41851492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 42420360 - 42420431
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||| ||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||| | |||||||||    
T  42420360 ttatatcatatacaaaaacaatttaacgttattttatcttttgctataaaaatagcttatacgtaagcgctt 42420431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 225
Target Start/End: Complemental strand, 45229586 - 45229456
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| |||| ||||||  |||||||||||||||||||||| |||||||  || |||| |||| |||| || | ||| ||||||||||||||| ||||| |    
T  45229586 cttatgacatttttcattagcttttttcagcttattttcataagttctcgaagatagcttatgaaaacaa-tgataacatatacaaaaacaatttaacct 45229488  T
Q  194 taatttatcttttgctataaaactagcttatg 225  Q
     | |||||| ||||||||| || |||||||||    
T  45229487 cattttatcgtttgctatagaaatagcttatg 45229456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 41241144 - 41241258
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    ||||||||||||||||| ||||||||||| |  || |||  |||  ||||  | ||||||||||||||||||||| ||||||| | |||||||||| |||    
T  41241144 aagcttttttcagcttaatttcacaagttttccaagataacttaggaaaactacttatagcatatacaaaaacaatttaacttcattttatcttttccta 41241243  T
Q  211 taaaactagcttatg 225  Q
    || || |||||||||    
T  41241244 tagaaatagcttatg 41241258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 41407367 - 41407245
Alignment:
Q  104 ttttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaa-caaattaactttaatttatc 202  Q
    |||||| |||||| ||| || |||||||||||||||||  || | |  |||| ||||||| |||||||||||||||||| ||| ||||||||| ||||||    
T  41407367 ttttcataagcttgtttaaggttattttcacaagttctcaaagaaaacttataaaaataacttatagcatatacaaaaaacaatttaactttattttatc 41407268  T
Q  203 ttttgctataaaactagcttatg 225  Q
    ||||| || | || |||||||||    
T  41407267 ttttggtacagaaatagcttatg 41407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 24101008 - 24100880
Alignment:
Q  89 aacatcttaagacaattttcacaagctttttt-cagcttattttcacaagttctttaatatagtttattaaaataatttatagcat-atacaaaaacaaa 186  Q
    |||| |||| |||||| |||| |||||||||| |  ||| |||| | |||||||| ||||||| ||||||||| ||||||||| || |||||||| ||||    
T  24101008 aacaccttatgacaatattcataagctttttttctacttgtttttataagttcttcaatatagcttattaaaacaatttatagtattatacaaaatcaaa 24100909  T
Q  187 ttaactttaatttatcttttgctataaaa 215  Q
    ||||  ||| |||| ||||||||||||||    
T  24100908 ttaatgttattttaccttttgctataaaa 24100880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 4026869 - 4026762
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    ||||||||||||||||| |||||||| |  ||| ||||| |||| |  |||||   ||| |||||| || ||||||||| |||||||||||||||||||     
T  4026869 ttttcagcttattttcataagttcttcaggataatttatgaaaacagcttataatttatgcaaaaataatttaactttattttatcttttgctataaaaa 4026770  T
Q  217 tagcttat 224  Q
    ||||||||    
T  4026769 tagcttat 4026762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 36114597 - 36114656
Alignment:
Q  173 tatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagc 232  Q
    ||||||||||||| ||||||||| ||||||||||| |||| |||||| ||||||||||||    
T  36114597 tatacaaaaacaatttaactttattttatcttttgttatagaactaggttatgcataagc 36114656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 680555 - 680487
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaa 185  Q
    |||||||||||||||||||||||||| || |||| |||| ||||||  ||||||| ||||| |||||||    
T  680555 ttttcagcttattttcacaagttcttcaagatagcttatgaaaatagcttatagcttatacgaaaacaa 680487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 40835597 - 40835488
Alignment:
Q  100 acaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattt 199  Q
    |||||||||||||||||||||  ||||||||||| |||||||  ||||||| |||||||      ||||| || |||||||||||| | |||| |  |||    
T  40835597 acaattttcacaagctttttttggcttattttcataagttctccaatatagcttattaa------ttatatcacatacaaaaacaattcaactctgtttt 40835504  T
Q  200 atcttttgctataaaa 215  Q
    ||||||| ||||||||    
T  40835503 atctttttctataaaa 40835488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 42868479 - 42868587
Alignment:
Q  112 agcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctat 211  Q
    |||||||||||||||||||||| |||||||  ||||||  |||  ||||||  |||    |||||||||||||| ||||||||| |||||||||| ||||    
T  42868479 agcttttttcagcttattttcataagttctccaatataacttac-aaaatagctta----atatacaaaaacaatttaactttattttatctttttctat 42868573  T
Q  212 aaaactagcttatg 225  Q
     ||| |||||||||    
T  42868574 gaaaatagcttatg 42868587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 12195022 - 12194980
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttct 141  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  12195022 gacaattttcataagcttttttcaacttattttcacaagttct 12194980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 15305661 - 15305599
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||||||| ||||||||| || ||||| ||| |||||| |||||||||||| |||||||||||    
T  15305661 ttatagcaaatacaaaaataatttaacattattttatcatttgctataaaaatagcttatgca 15305599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 11201381 - 11201498
Alignment:
Q  99 gacaattttcacaagcttttttcagcttatttt-cacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaat 197  Q
    ||||| ||||| |||||||||||| || ||||| || |||||||  |||||||| ||  |||| || |||||| |||||||||||||| || || ||| |    
T  11201381 gacaactttcataagcttttttcaactcatttttcataagttctccaatatagtatacaaaaacaacttatagtatatacaaaaacaattttaccttatt 11201480  T
Q  198 ttatcttttgctataaaa 215  Q
    |||||||||  |||||||    
T  11201481 ttatcttttaatataaaa 11201498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 18962086 - 18962171
Alignment:
Q  147 atagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagc 232  Q
    |||| |||| |||||| |||||||| ||||  ||||||  ||||||||| ||||||||||| ||||||| ||||| || |||||||    
T  18962086 atagcttatgaaaatagtttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagc 18962171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 5745775 - 5745871
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaa 185  Q
    |||| |||| ||||||||||| ||||||||| || || ||||||  |||| ||  ||||||| ||||  |||||| |||||||||||| ||||||||    
T  5745775 aacagcttatgacaattttcataagctttttccaactaattttcctaagtcctcaaatatagcttatagaaataacttatagcatataaaaaaacaa 5745871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 20926573 - 20926517
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttat 155  Q
    |||||||||||  ||||||||||| |||||||||| ||||||| |||||||| ||||    
T  20926573 gacaattttcattagcttttttcaacttattttcataagttctctaatatagcttat 20926517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 3611222 - 3611163
Alignment:
Q  173 tatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagc 232  Q
    ||||||||||||| ||||||||| |||| ||||||||||| || || ||||| |||||||    
T  3611222 tatacaaaaacaatttaactttattttaccttttgctatagaaataacttatacataagc 3611163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 3932409 - 3932294
Alignment:
Q  115 ttttttcagcttattttcacaagttctttaatatagttt-----attaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgct 209  Q
    |||||| |||||||||||| |||||||||||||||| ||     || ||||||   |||||||||| | ||||  | ||||||||| |||||||||||||    
T  3932409 tttttttagcttattttcataagttctttaatatagcttatagcataaaaatagcctatagcatatcccaaaattatttaactttattttatcttttgct 3932310  T
Q  210 ataaaactagcttatg 225  Q
    ||| || || ||||||    
T  3932309 atagaaataacttatg 3932294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 27695619 - 27695690
Alignment:
Q  123 gcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaacttt 194  Q
    ||||||||||||||||||   ||||||| |||| |||| |  ||||| |||||||||||||||| |||||||    
T  27695619 gcttattttcacaagttccccaatatagcttataaaaacagcttatatcatatacaaaaacaaaataacttt 27695690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 2416376 - 2416250
Alignment:
Q  106 ttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttt 205  Q
    ||||||||||  ||||||| || ||||| ||||||| | |||||  |||| |||| |  ||||||| ||||  ||||||| ||||||| | |||||||||    
T  2416376 ttcacaagctaatttcagcatactttcataagttctcttatataacttataaaaacagcttatagcttatatcaaaacaatttaacttcattttatcttt 2416277  T
Q  206 tgctataaaactagcttatgcataagc 232  Q
    ||||| | || || ||||| |||||||    
T  2416276 tgctacagaaataacttatacataagc 2416250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 2981789 - 2981735
Alignment:
Q  218 agcttatgcataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    |||||||||||||| |||||| |||||| ||| |||||| || ||||||||||||    
T  2981789 agcttatgcataagtgcttgttctataagctgtaaataagctctttatccaaaca 2981735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 13325628 - 13325514
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    ||||||||||||||| ||||||| ||||||| | | | |  || | |||||   ||||||  ||||| |||| || ||||||||| |||||| ||| |||    
T  13325628 aagcttttttcagctcattttcataagttctctgagaaaacttctgaaaattgcttatagtgtatacgaaaataatttaactttattttatcattttcta 13325529  T
Q  211 taaaactagcttatg 225  Q
    |||||||||||||||    
T  13325528 taaaactagcttatg 13325514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 19608704 - 19608762
Alignment:
Q  178 aaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||| ||||||||||  |||||||||||||| ||||| |||||||| |||||| ||||    
T  19608704 aaaaaaaaattaacttctatttatcttttgctgtaaaaatagcttatacataagtgctt 19608762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 1633493 - 1633534
Alignment:
Q  100 acaattttcacaagcttttttcagcttattttcacaagttct 141  Q
    ||||||||||| ||| |||||||||||||||||| |||||||    
T  1633493 acaattttcactagcctttttcagcttattttcataagttct 1633534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 15757820 - 15757865
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    ||||||||||||||||||| ||| |||||| || ||||||||||||    
T  15757820 ataagcgcttgtgctataagctgaaaataagctgtttatccaaaca 15757865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 20952423 - 20952342
Alignment:
Q  101 caattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaa 182  Q
    |||||||||  | ||||||||| |||||||||| |||||||  ||||||| | || |||| || |||||||||||| |||||    
T  20952423 caattttcattaacttttttcaacttattttcataagttctccaatatagctaataaaaacaacttatagcatataaaaaaa 20952342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 28206301 - 28206212
Alignment:
Q  135 aagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttat 224  Q
    |||||||  ||||||| |||| |||| |||||||| |||||| ||||| || ||||| |   ||||||||||| ||||||| ||||||||    
T  28206301 aagttctccaatatagcttataaaaacaatttataacatataaaaaaataatttaacatcgttttatcttttgatataaaaatagcttat 28206212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 41407217 - 41407172
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    ||||||||||||||||||| ||||||| || || ||||||||||||    
T  41407217 ataagcgcttgtgctataagctgcaaacaagctgtttatccaaaca 41407172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 41812159 - 41812216
Alignment:
Q  168 tagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||||||||||||||| ||||||| | |||| | ||||| |||||| |||||||||    
T  41812159 tagcatatacaaaaacaatttaacttcattttaccatttgccataaaaatagcttatg 41812216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 44439407 - 44439468
Alignment:
Q  146 tatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttg 207  Q
    ||||| |||| |||| |||||||||| ||||||||||||  ||||||||| ||||| |||||    
T  44439407 tatagcttataaaaacaatttatagcttatacaaaaacagtttaactttattttatattttg 44439468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 7825234 - 7825146
Alignment:
Q  187 ttaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaa-taatctatttatccaaacatg 274  Q
    ||||||||| ||||||||||| ||||||| |||||||| || || | ||| || ||||| || |||| ||| || ||||||||||||||    
T  7825234 ttaactttactttatcttttgttataaaaatagcttatacagaaacacttatggtataaacttcaaattaagctgtttatccaaacatg 7825146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 9595310 - 9595254
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcat 173  Q
    ||||||||||||||||| |||   ||||| ||||||||| |||||||||||| ||||    
T  9595310 ttttcagcttattttcataagcattttaagatagtttatgaaaataatttatggcat 9595254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 11513956 - 11513860
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttg 207  Q
    ||||| |||||||||||||| || |||||||  |  |||| |||| |||| || ||||||| ||||  ||||||| || |||||| |||||||||||    
T  11513956 aagctattttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttg 11513860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 12289867 - 12289775
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatata-caaaaacaaattaa 190  Q
    |||||| |||| |||||||||||| |||||||||| |||||||  ||||||  |||| |||| || ||||| ||| || ||||||||| ||||    
T  12289867 gacaatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaacttataacatgtaccaaaaacaatttaa 12289775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 36125190 - 36125126
Alignment:
Q  157 aaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagct 221  Q
    |||| ||||||||||| |||||||||||| || |  ||| ||||||||||||||| ||| |||||    
T  36125190 aaaacaatttatagcaaatacaaaaacaagttgaaattattttatcttttgctattaaaatagct 36125126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 42659217 - 42659277
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||||||||||||||||| || |||||| |||| | ||| | |||||| |||||||||    
T  42659217 ttatagcatatacaaaaacaatttcactttattttaccattttccataaaaatagcttatg 42659277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 44119774 - 44119722
Alignment:
Q  179 aaaacaaattaactttaatttatcttttgctataaaactagcttatgcataag 231  Q
    |||| |||||||||||| |||||||||| |||||||| || ||||| ||||||    
T  44119774 aaaaaaaattaactttattttatcttttactataaaaataacttatacataag 44119722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 1e-27; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 30443973 - 30443858
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| |||||||  |||||||||||| |||| |  ||||||||||||||||| ||| ||    
T  30443973 aacagcttatgacaattttcacaagcttttttcagcttattttcataagttctccaatatagtttataaaaacagcttatagcatatacaaaagcaattt 30443874  T
Q  189 aactttaatttatctt 204  Q
    ||||| | ||||||||    
T  30443873 aacttcattttatctt 30443858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 20880573 - 20880421
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||| ||||| || || |||| |||| ||||||||||| |||||||||| |||||||||||| |||||||  ||||||| || | |||| | ||||||||    
T  20880573 ttgggagaacctatgaaaacagcttatgacaattttcataagcttttttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagc 20880474  T
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||||||||||| ||||| ||  |||||| |||||||||||| |||||||||    
T  20880473 atatacaaaaacaatttaac-ttgttttatcatttgctataaaaatagcttatg 20880421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 99 - 225
Target Start/End: Original strand, 35959456 - 35959582
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatt 198  Q
    ||||||||||| ||||||||||||||||||||||| || |||| |||||||| ||||  ||| || ||| |||||||||||||| || ||||||||| ||    
T  35959456 gacaattttcaaaagcttttttcagcttattttcaaaaattctctaatatagcttatagaaacaacttacagcatatacaaaaataatttaactttattt 35959555  T
Q  199 tatcttttgctataaaactagcttatg 225  Q
    |||| ||| ||||| || |||||||||    
T  35959556 tatccttttctatagaaatagcttatg 35959582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 94 - 223
Target Start/End: Original strand, 36631046 - 36631175
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| ||| ||||||| ||||||||||| ||||||||||| |||||||  ||||||| | || |||| || ||||||||| ||||||||||| |||||||    
T  36631046 cttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagcatgtacaaaaacaatttaactt 36631145  T
Q  194 taatttatcttttgctataaaactagctta 223  Q
    || |||||| ||| ||||| || |||||||    
T  36631146 tactttatcctttactatagaaatagctta 36631175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 36189640 - 36189528
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| |||||||||||||||||||| |  | ||||||||| |||||||  ||||||  |||| ||||||  ||||| ||||||||||||||| |||||||    
T  36189640 cttatgacaattttcacaagcttttatg-gtttattttcataagttctccaatatatcttataaaaatagcttatatcatatacaaaaacaatttaactt 36189542  T
Q  194 taatttatcttttg 207  Q
    || |||||||||||    
T  36189541 tattttatcttttg 36189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 402515 - 402674
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||| ||||| || || |||| |||| |||| | |||| ||||| ||||||||||| |||||||||||||| || |||| |||| |||| |  ||||| |    
T  402515 ttgggagaacgtatgaaaacagcttatgacattgttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataac 402614  T
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagc 232  Q
     ||||| ||||||| |||| ||||| ||||||||| ||||| || |||||||| |||||||    
T  402615 ttatacgaaaacaatttaaatttaa-ttatctttttctatagaaatagcttatacataagc 402674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 227
Target Start/End: Complemental strand, 20170588 - 20170465
Alignment:
Q  104 ttttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatct 203  Q
    |||||| |||||||||||| ||||||||||  ||||||  || |||  || | |||| || ||||||||||||||||||||| ||||| ||| |||||||    
T  20170588 ttttcataagcttttttcaacttattttcattagttctcaaaaataacttgtaaaaacaacttatagcatatacaaaaacaatttaacattattttatct 20170489  T
Q  204 tttgctataaaactagcttatgca 227  Q
    |||||  ||||| |||||| ||||    
T  20170488 tttgcagtaaaaatagcttgtgca 20170465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 14145959 - 14145857
Alignment:
Q  122 agcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagct 221  Q
    |||||||||||| ||||  |  || |||| |||| ||||||| ||||||||||||| ||||||| ||||||||| |||||||| || ||||||||| |||    
T  14145959 agcttattttcataagtaatccaagatagcttatgaaaataacttatagcatatacgaaaacaatttaactttattttatcttctgttataaaacttgct 14145860  T
Q  222 tat 224  Q
    |||    
T  14145859 tat 14145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 21335722 - 21335620
Alignment:
Q  122 agcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagct 221  Q
    |||||||||||| ||||||| || ||||| |||| |||| |  ||| || |||||||||||||| | ||||||| |||||||||| |||||||| |||||    
T  21335722 agcttattttcataagttctctagtatagcttatgaaaacagcttacagaatatacaaaaacaactaaactttattttatctttttctataaaattagct 21335623  T
Q  222 tat 224  Q
    |||    
T  21335622 tat 21335620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 39980793 - 39980683
Alignment:
Q  105 tttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatctt 204  Q
    ||||| |||||||||||| |||||||||| |||||||  ||||||| |||| |||| || ||||||||| | ||||||||| ||||| ||| | ||| ||    
T  39980793 tttcataagcttttttcaacttattttcataagttctccaatatagcttataaaaacaacttatagcatgttcaaaaacaatttaacgttattgtatgtt 39980694  T
Q  205 ttgctataaaa 215  Q
     ||||||||||    
T  39980693 ctgctataaaa 39980683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 37689309 - 37689177
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||||| |||||||||||| |||||||||| |||| || | ||||| |  || |||| ||  |||||||||||||||||||| ||    
T  37689309 aacagcttatgacaattttca-aagcttttttcaacttattttcataagtgctctgatatactc-ataaaaacaacctatagcatatacaaaaacaattt 37689212  T
Q  189 aactttaatttatcttttgctataaaactagcttatg 225  Q
      ||||| |||||||||||||||| || |||||||||    
T  37689211 --ctttattttatcttttgctatagaaatagcttatg 37689177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 30956692 - 30956752
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||||| || |||||||||    
T  30956692 ttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatg 30956752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 30972504 - 30972564
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||||| || |||||||||    
T  30972504 ttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatg 30972564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 53789451 - 53789587
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| |||| |||||| ||||||||||||||||| ||||| |||||||  |  |||| |||| | || || ||||||||||||| ||||||  ||    
T  53789451 aacagcttatgacacttttcataagcttttttcagcttaatttcataagttctccatgatagcttatgataacaacttatagcatataccaaaacatttt 53789550  T
Q  189 aactttaatttatcttttgctataaaactagcttatg 225  Q
    || |||| || ||||||| ||||| || |||||||||    
T  53789551 aattttagttcatcttttcctatagaaatagcttatg 53789587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 272
Target Start/End: Original strand, 42747843 - 42747950
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataatctattta 264  Q
    ||||||| || ||| ||| || |||||||| ||||||||| | ||||| || |||||||| |||| ||| |||||||||||  ||||||||| || ||||    
T  42747843 ttatagcttacacataaataatttaactttcatttatcttattctatagaaatagcttatacataggcgtttgtgctataagttgcaaataagctgttta 42747942  T
Q  265 tccaaaca 272  Q
    ||||||||    
T  42747943 tccaaaca 42747950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 165 - 272
Target Start/End: Original strand, 10704639 - 10704742
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataatctattta 264  Q
    |||||||| |||||||||||| ||||| | | ||||||||||||||||||| |||||||||  |||  |||| |||  ||| |||||||||| || ||||    
T  10704639 ttatagcaaatacaaaaacaatttaacatcattttatcttttgctataaaagtagcttatg--taa--gcttatgcattaagctgcaaataagctgttta 10704734  T
Q  265 tccaaaca 272  Q
    ||||||||    
T  10704735 tccaaaca 10704742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 24684812 - 24684949
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcag-cttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaat 187  Q
    |||| |||| |||||||| |||||| ||||||  | ||||||||| |||| |||   |||| | |||| |||  || ||||||||||||||||||||| |    
T  24684812 aacaacttatgacaatttgcacaagatttttttcgtcttattttctcaagatctccgatattgcttataaaagcaacttatagcatatacaaaaacaatt 24684911  T
Q  188 taactttaatttatcttttgctataaaactagcttatg 225  Q
     || |||| |||||||||| |||||||| |||||||||    
T  24684912 aaaatttattttatctttttctataaaaatagcttatg 24684949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 35127419 - 35127504
Alignment:
Q  147 atagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagc 232  Q
    ||||| ||| |||||| |||||||||||| ||||||||| ||||||||| | ||||||||| |||| || |||| ||| |||||||    
T  35127419 atagtgtatgaaaatagtttatagcatatgcaaaaacaatttaactttagtatatcttttgttatagaaatagcctatacataagc 35127504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 49034291 - 49034419
Alignment:
Q  127 attttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgc 226  Q
    ||||||| |||||||  ||||||| |||| |||| || ||||||||||| || |||||| |||||  || ||||||||||||||||||| ||   ||| |    
T  49034291 attttcagaagttctccaatatagcttataaaaacaacttatagcatatgcacaaacaatttaacggtattttatcttttgctataaaaataaaatat-c 49034389  T
Q  227 ataagcgcttgtgctataatctgcaaataa 256  Q
     ||||||||| |||||||  ||||||||||    
T  49034390 ttaagcgcttctgctataggctgcaaataa 49034419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 2128331 - 2128403
Alignment:
Q  179 aaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgca 251  Q
    ||||||| ||||||||| ||||||||||| |||| || |||||||| ||||| ||||| |||||||| |||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttatacataaacgcttatgctataagctgca 2128403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 12862284 - 12862375
Alignment:
Q  135 aagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||||||  ||||||| |||| |||| || ||||||||||||||||| ||| |||| | || ||||||||||||||||||| ||| |||||||    
T  12862284 aagttctccaatatagcttatgaaaacaacttatagcatatacaaaa-caatttaaatctattttatcttttgctataaaaatagattatgca 12862375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 37689432 - 37689519
Alignment:
Q  147 atagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgct 235  Q
    |||| |||| |||||| |||||||| ||||  |||| || ||||||||| ||||||||||| ||||||| |||||||| ||||||||||    
T  37689432 atagcttatgaaaatagtttatagcttatatgaaaataatttaactttactttatcttttgttataaaaatagcttat-cataagcgct 37689519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 21367764 - 21367641
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||| ||||| || || |||| |||| |||| | |||||||||| ||||||||||||||||| |||||||  || |||| |||| |||| || |||||      
T  21367764 ttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttataca 21367665  T
Q  172 atatacaaaaacaaattaacttta 195  Q
     ||||| ||||||| |||||||||    
T  21367664 ttatacgaaaacaatttaacttta 21367641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 47132389 - 47132310
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaa 190  Q
    |||||||||||| |||||||||| || ||||  ||||||| |||| |||| ||  |||||||||||||||||||| ||||    
T  47132389 aagcttttttcaacttattttcataacttctccaatatagcttataaaaacaacctatagcatatacaaaaacaatttaa 47132310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 44061046 - 44061148
Alignment:
Q  122 agcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagct 221  Q
    |||||| ||||| ||||||| ||| |||   ||| |||| || ||||||| |||| |||||||| ||||| ||| |||||||||||||||| || |||||    
T  44061046 agcttaatttcataagttctctaagatatcatatgaaaacaacttatagcttatagaaaaacaatttaaccttattttatcttttgctatagaaatagct 44061145  T
Q  222 tat 224  Q
    |||    
T  44061146 tat 44061148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 46778164 - 46778284
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||| ||||| || || |||| |||| |||| |||||| ||| ||| |||||||||||| || ||||| |  || ||||||||| |||| | ||||||||    
T  46778164 ttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagcttattt-cataagttgtccaagatagtttatgaaaacagtttatagc 46778262  T
Q  172 atatacaaaaacaaattaactt 193  Q
    ||| |||||||||| |||||||    
T  46778263 ataaacaaaaacaatttaactt 46778284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 849669 - 849625
Alignment:
Q  162 aatttatagcatatacaaaaacaaattaactttaatttatctttt 206  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||    
T  849669 aatttatagcatattcaaaaacaatttaactttattttatctttt 849625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 24085356 - 24085452
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatat-acaaaaacaaattaactttaatttatcttttgctata 212  Q
    |||||||||||||||||||||||||  || |||| |||  |||| || ||||||| |||   ||||||||||| |||||| |||||| |||||||||    
T  24085356 ttttcagcttattttcacaagttctccaagatagcttacaaaaacaaattatagcttatgtgaaaaacaaattcactttattttatcgtttgctata 24085452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 28795853 - 28795909
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttat 155  Q
    ||||||||||  ||||| ||||||||||||||||| ||||||| |||||||| ||||    
T  28795853 gacaattttcttaagctcttttcagcttattttcataagttctctaatatagcttat 28795909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 30956780 - 30956828
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaacatga 275  Q
    |||||| |||||||||||| |||||||||| || |||||||||||||||    
T  30956780 ataagcccttgtgctataagctgcaaataagctgtttatccaaacatga 30956828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 30972592 - 30972640
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaacatga 275  Q
    |||||| |||||||||||| |||||||||| || |||||||||||||||    
T  30972592 ataagcccttgtgctataagctgcaaataagctgtttatccaaacatga 30972640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 35328307 - 35328354
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaacatga 275  Q
    |||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  35328307 ataagcgcttgt-ctataagctgcaaataagctatttatccaaacatga 35328354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 35696296 - 35696240
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataattta 167  Q
    |||||||||||| ||||||||||||||||||  ||||||| |||| |||| ||||||    
T  35696296 aagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaattta 35696240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 43062759 - 43062719
Alignment:
Q  101 caattttcacaagcttttttcagcttattttcacaagttct 141  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  43062759 caattttcacaagcttttttcagcttcttttcataagttct 43062719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 901982 - 901871
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    |||||||||||| |||||||||| |||||||  ||||||| |||| |||| ||  |||| |||||| ||||| ||  |||  ||| |||||||||||||     
T  901982 aagcttttttcaacttattttcataagttctccaatatagcttataaaaacaaagtataacatatataaaaataatataatgttattttatcttttgctc 901883  T
Q  211 taaaactagctt 222  Q
     |||| ||||||    
T  901882 gaaaaatagctt 901871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 225
Target Start/End: Original strand, 18405831 - 18405958
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt-aactttaat 197  Q
    |||| |||||| || ||||||  |||||| ||||| |||||||  || |||| |||| |||| || |||||||||||||||||| ||||| |||  || |    
T  18405831 gacacttttcataatctttttcaagcttaatttcataagttctccaagatagcttatgaaaacaacttatagcatatacaaaaaaaaattcaacgatatt 18405930  T
Q  198 ttatcttttgctataaaactagcttatg 225  Q
    ||||||||| ||||| || || ||||||    
T  18405931 ttatcttttcctatataaataacttatg 18405958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 33405197 - 33405280
Alignment:
Q  129 tttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctata 212  Q
    ||||| |||||||| || |||| |||| |||| |  ||||||| ||||  ||||||||||||||||| |||| |||||||||||    
T  33405197 tttcataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctata 33405280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 36139941 - 36139843
Alignment:
Q  106 ttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatctt 204  Q
    |||||||||| ||||||||||||||||| ||| |||| || ||||| || | ||| || ||||||| ||||| ||| ||  || |||||| ||||||||    
T  36139941 ttcacaagctgttttcagcttattttcataagctcttcaagatagtataatgaaacaacttatagcttatacgaaatcagtttgactttattttatctt 36139843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 233
Target Start/End: Original strand, 49465681 - 49465797
Alignment:
Q  115 ttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaa 214  Q
    |||||| ||||||||| || |||||||  | ||||| |||| |||| ||  | |||| ||||| |||| |||||||||||| ||||||||||| ||||||    
T  49465681 ttttttaagcttatttccataagttctccagtatagcttatgaaaacaacatttagc-tatacgaaaa-aaattaactttattttatcttttgttataaa 49465778  T
Q  215 actagcttatgcataagcg 233  Q
    | |||||||  ||||||||    
T  49465779 aatagcttacacataagcg 49465797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 25447292 - 25447357
Alignment:
Q  147 atagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctata 212  Q
    |||| |||| |||| | |||||||| ||||||||||||| |||| |||| |||||||||| |||||    
T  25447292 atagcttatgaaaacagtttatagcttatacaaaaacaatttaagtttattttatcttttactata 25447357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 905051 - 905107
Alignment:
Q  180 aaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||||||| |||||| ||||||||||| |||| || |||||||| | |||||||||    
T  905051 aaacaaattgactttattttatcttttgttatagaaatagcttatacttaagcgctt 905107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 215
Target Start/End: Complemental strand, 1816649 - 1816537
Alignment:
Q  103 attttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatc 202  Q
    ||||||| | ||| ||||||||||||||| | ||| |||  | ||||| |||| |||| || ||||| | ||||||||||||  || |||||| ||||||    
T  1816649 attttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgactttattttatc 1816550  T
Q  203 ttttgctataaaa 215  Q
    ||||  |||||||    
T  1816549 ttttattataaaa 1816537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 49092820 - 49092736
Alignment:
Q  128 ttttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctata 212  Q
    |||||| ||||||| |||||||| |||| |||| || ||| ||||||||| | || || |||| || | ||||||||||||||||    
T  49092820 ttttcataagttctctaatatagcttataaaaacaacttacagcatatacgagaataatttaatttaattttatcttttgctata 49092736  T

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Target: chr8 (Bit Score: 58; Significance: 4e-24; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 18930760 - 18930615
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    ||||| |||||| |||||| ||| |||||||  || |||| ||||| ||| | |||| ||||||||||| ||||| |||||||| |||||||||||| ||    
T  18930760 aagctgttttcatcttattctcataagttctcgaagatagcttattgaaacagtttacagcatatacaataacaatttaactttcatttatcttttgtta 18930661  T
Q  211 taaaactagcttatgcataagcgcttgtgctataatctgcaaataa 256  Q
    || ||||||||||| |||| ||  ||||||||||| ||||||||||    
T  18930660 tataactagcttatacatacgcatttgtgctataagctgcaaataa 18930615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 100 - 225
Target Start/End: Complemental strand, 12976281 - 12976157
Alignment:
Q  100 acaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattt 199  Q
    |||||||||| ||||||||||||||||| ||||| ||||||| |||||||| |||| |||| || || ||||||||| ||||  || ||||||||| |||    
T  12976281 acaattttcaaaagcttttttcagctta-tttcataagttctctaatatagcttataaaaacaaattgtagcatataaaaaattaatttaactttatttt 12976183  T
Q  200 atcttttgctataaaactagcttatg 225  Q
    || |||||||||| || |||||||||    
T  12976182 atattttgctatagaaatagcttatg 12976157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 26771362 - 26771209
Alignment:
Q  72 ttggaagaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagc 171  Q
    |||| ||||| || || |||| |||| ||||||||||| |||| ||||||| |||||||||| ||||||| |||||||  |||| |||| |  |||||||    
T  26771362 ttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattttcataagttctctaatatatcttataaaaaaagcttatagc 26771263  T
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||||||||||| |||| |||| |||||  ||| ||||| || |||||||||    
T  26771262 atatacaaaaacaatttaagtttattttatgctttactatagaaatagcttatg 26771209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 10758247 - 10758369
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||||| |||||||||||||||| |||||| |||||  | ||||||| |||| || | || ||||||||||||||||||||| ||    
T  10758247 aacagcttatgacaattttcaaaagcttttttcagcttgttttcataagttgct-aatatagcttataaagacaacttatagcatatacaaaaacaattt 10758345  T
Q  189 aactttaatttatcttttgctata 212  Q
    ||||||| |||||  |||||||||    
T  10758346 aactttattttatgatttgctata 10758369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 100 - 193
Target Start/End: Complemental strand, 18133725 - 18133632
Alignment:
Q  100 acaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||||||||||||||||||||||||||||||||| |||||||  |||||||||||| |||  |  |||||| |||||||||| ||| |||||||    
T  18133725 acaattttcacaagcttttttcagcttattttcataagttctccaatatagtttataaaaccagcttataggatatacaaaagcaatttaactt 18133632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 12497297 - 12497359
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||| | |||||||||    
T  12497297 ttatagcatatacaaaaacaagttaactttattttatcttttgctataaaaatggcttatgca 12497359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 271
Target Start/End: Original strand, 43045726 - 43045896
Alignment:
Q  100 acaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaattt 199  Q
    |||||||| | |||||||||||| |||||||||| |||||||  |||||||||||| ||  |  ||||||| ||||||||||  |  ||||  ||| |||    
T  43045726 acaattttaataagcttttttcaacttattttcataagttctccaatatagtttat-aattttttttatagtatatacaaaagaagtttaatattatttt 43045824  T
Q  200 atcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataatctatttatccaaac 271  Q
    ||||||||  || ||| |||||||||||||||  |||||||||||| || ||| |||  | |||||||||||    
T  43045825 atcttttgtcattaaaatagcttatgcataagtacttgtgctataagctacaagtaaggtgtttatccaaac 43045896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 25930566 - 25930680
Alignment:
Q  111 aagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgcta 210  Q
    ||||||||||||||||| | |||||||||||  || |||| |||| |||| |||||| ||||||||||||||||  |||| |||| || ||| ||| |||    
T  25930566 aagcttttttcagcttactatcacaagttctccaagatagcttatgaaaacaatttaaagcatatacaaaaacattttaattttatttcatcctttccta 25930665  T
Q  211 taaaactagcttatg 225  Q
    || || |||||||||    
T  25930666 tagaaatagcttatg 25930680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 11861871 - 11861751
Alignment:
Q  102 aattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttat 201  Q
    |||||||| |||||||||| | | |||||||| ||||||| || ||||| |||| |||| || ||||||||||||||||   |||||||||||| ||| |    
T  11861871 aattttcaaaagctttttttaacgtattttcataagttctctattatagcttataaaaacaacttatagcatatacaaa---aaattaactttattttgt 11861775  T
Q  202 cttttgctataaaactagcttatg 225  Q
      ||||||||| || |||||||||    
T  11861774 tctttgctatagaaatagcttatg 11861751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 29205830 - 29205765
Alignment:
Q  147 atagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctata 212  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||||| | |||||||||| |||||    
T  29205830 atagtttatgaaaataacttatagcatatacaaaaacaatttaacttcattttatctttttctata 29205765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 35534603 - 35534736
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| ||||||||| ||||||||||||| ||||| ||||| |||||||  ||||||  |||| |||| ||  ||||  | |||||||||||| ||    
T  35534603 aacagcttatgacaattttaacaagcttttttcggcttactttcataagttctccaatataacttatgaaaacaacatata--acatacaaaaacaattt 35534700  T
Q  189 aactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||| |||||||||| |||||||| || ||||||    
T  35534701 aactttattttatctttt-ctataaaaatatcttatg 35534736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 1058140 - 1058200
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||||||||||||||||| |||||||||| |||||  |||||||||||| |||||||||    
T  1058140 ttatagcatatacaaaaacagattaactttattttatgatttgctataaaaatagcttatg 1058200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 11407338 - 11407395
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaat 146  Q
    |||| ||||| ||||||||||||||||||||||| |||||||| | ||||||||||||    
T  11407338 aacaacttaatacaattttcacaagcttttttcaacttatttttataagttctttaat 11407395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 1930032 - 1929968
Alignment:
Q  188 taactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaa 252  Q
    |||||||| |||||||||| ||||| || || ||||| |||||||||||||||||||| ||||||    
T  1930032 taactttattttatctttttctatagaaataacttatacataagcgcttgtgctataagctgcaa 1929968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 16734046 - 16733986
Alignment:
Q  152 ttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctata 212  Q
    |||| |||| || ||||||||||||||||||||| |||| |||| ||||||||||||||||    
T  16734046 ttatcaaaacaacttatagcatatacaaaaacaatttaagtttagtttatcttttgctata 16733986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 27028911 - 27028807
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaatt 188  Q
    |||| |||| |||| |||||| ||||| ||||||||||||||||| ||| |||  || |||| |||| |||| |  |||||||||||||| |||||| ||    
T  27028911 aacagcttaggacatttttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttatagcatatacacaaacaattt 27028812  T
Q  189 aactt 193  Q
    |||||    
T  27028811 aactt 27028807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 38602395 - 38602288
Alignment:
Q  107 tcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatctttt 206  Q
    ||||||||| ||||| |||||||||||||| ||||  | ||||| |||| |||| |  ||||||||||| ||||| ||| ||||||| | ||||||||||    
T  38602395 tcacaagctgttttcggcttattttcacaaattctccagtatagcttataaaaacagcttatagcatatgcaaaagcaatttaacttcattttatctttt 38602296  T
Q  207 gctataaaa 215  Q
     ||||||||    
T  38602295 -ctataaaa 38602288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 10114541 - 10114427
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    ||||||||||||||||| | |||||  ||||||| | || |||| |  ||||||| ||||| ||||||| | ||||| | |||||||||||||||| ||     
T  10114541 ttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttataccaaaacaattcaactt-attttatcttttgctatagaaa 10114443  T
Q  217 tagcttatgcataagc 232  Q
    |||||||| |||||||    
T  10114442 tagcttatacataagc 10114427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 41475134 - 41475197
Alignment:
Q  173 tatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||| ||||||| |||||| || ||||||||||||||||||| |||||||| |||||| ||||    
T  41475134 tatacgaaaacaatttaactgtattttatcttttgctataaaattagcttatacataagtgctt 41475197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 16825533 - 16825665
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| ||||||||||| ||||||||| || |||||||||| ||||||   ||||||| || |  ||| || ||||| | || |||||||||| ||||| |    
T  16825533 cttatgacaattttcataagcttttt-caacttattttcataagttcggcaatatagcttgtagaaacaacttataacgtaaacaaaaacaatttaacat 16825631  T
Q  194 taatttatcttttgctataaaactagcttatgca 227  Q
    || |||||| ||| |||||| | |||||||||||    
T  16825632 tattttatcctttactataagaatagcttatgca 16825665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 40981046 - 40981001
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||    
T  40981046 ataagcgcttgtgctataagctgcaaataagctgtttatccaaaca 40981001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 9130301 - 9130389
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaa 182  Q
    |||| |||||||||   ||| |||||||| |||||||||||||||||||||||||   |||| |||| || |||||| ||||| |||||    
T  9130301 cttatgacaatttttgtaagtttttttcaacttattttcacaagttctttaatattacttataaaaacaacttatagaatatataaaaa 9130389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 276
Target Start/End: Complemental strand, 7514641 - 7514470
Alignment:
Q  106 ttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttt 205  Q
    |||| ||||| ||| || || |||||||| ||||||  || |||| |||| |||| |  || |||| ||||  ||||||| | ||| ||| ||||  |||    
T  7514641 ttcataagctgtttccaactaattttcactagttctgcaaaatagcttatgaaaacagcttgtagcttatatgaaaacaattgaacattattttagtttt 7514542  T
Q  206 tgctataaaactagcttatgcataagcgctt-gtgctataatctgcaaataatctatttatccaaacatgat 276  Q
    ||||||| || |||||||| |||||| |||| |||||||||||||||| |||  ||||||| |||| |||||    
T  7514541 tgctatagaaatagcttatacataagggctttgtgctataatctgcaactaagttatttattcaaatatgat 7514470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 37353315 - 37353385
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    |||||||||| |||||||||| ||||||||| ||||||||||| |||| || ||| || | |||||||||||    
T  37353315 ttatagcatacacaaaaacaatttaacttta-tttatcttttgttatagaaatagtttgtacataagcgctt 37353385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 37444489 - 37444552
Alignment:
Q  173 tatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||| ||||||| ||||||||| ||||||||||| ||||  | |||||||| |||||||||||    
T  37444489 tatacgaaaacaatttaactttactttatcttttgttatagtaatagcttatacataagcgctt 37444552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 42043368 - 42043471
Alignment:
Q  122 agcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagct 221  Q
    |||||||| |||  |||||| ||| |||| |||| |||| || ||||| ||||| ||||||||| ||||||  | |||||||||||||||| || ||||     
T  42043368 agcttattgtcattagttctctaagatagcttatgaaaacaacttatatcatatccaaaaacaatttaactgcattttatcttttgctatagaaatagca 42043467  T
Q  222 tatg 225  Q
    ||||    
T  42043468 tatg 42043471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 21653144 - 21653014
Alignment:
Q  106 ttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttt 205  Q
    |||| ||||| ||||||||||||||||| ||| |||  || |||| | || |||  ||||| |||| || || ||| ||| ||||||||| |||||||||    
T  21653144 ttcataagctattttcagcttattttcataagctctccaagatagctaatgaaagcaatttgtagcctacacgaaatcaatttaactttattttatcttt 21653045  T
Q  206 tgctataaaactagcttatgcataagcgctt 236  Q
    || || | || |||| ||| |||||||||||    
T  21653044 tgttacataaatagcctatacataagcgctt 21653014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 29169029 - 29169075
Alignment:
Q  226 cataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||    
T  29169029 cataagcgcttgtgctataagctgcagataagctctttatccaaaca 29169075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 35643988 - 35644042
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagttt 153  Q
    ||||||||||| |||||||||||| |||||||||| ||| |||  ||||||||||    
T  35643988 gacaattttcataagcttttttcaacttattttcataagctctccaatatagttt 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 7026721 - 7026668
Alignment:
Q  179 aaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagc 232  Q
    ||||||| || |||||| ||||||||||| ||||| | ||||||||||||||||    
T  7026721 aaaacaattttactttattttatcttttgttataacagtagcttatgcataagc 7026668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 230
Target Start/End: Original strand, 13814722 - 13814827
Alignment:
Q  125 ttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttat 224  Q
    ||||||||||||||| |  |||||||||||| || | ||  |||| ||| ||||||||| | ||||  ||| |||||||||||| |  ||| ||||||||    
T  13814722 ttattttcacaagttttccaatatagtttataaagacaacatataacatgtacaaaaactatttaatgttattttatcttttgcaaacaaaatagcttat 13814821  T
Q  225 gcataa 230  Q
    ||||||    
T  13814822 gcataa 13814827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 26215478 - 26215429
Alignment:
Q  187 ttaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||||||| ||||||||||| |||| || |||||||| |||||||||||    
T  26215478 ttaactttattttatcttttgttatagaaatagcttatacataagcgctt 26215429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 37531533 - 37531468
Alignment:
Q  120 tcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaa 185  Q
    |||||||||||||  || ||||||||||||  |||| |||| |||||| ||||| |||||||||||    
T  37531533 tcagcttattttcttaaattctttaatataacttataaaaacaatttagagcatgtacaaaaacaa 37531468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 38750389 - 38750300
Alignment:
Q  138 ttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||||| |||||| |||| |||| || ||||| ||||||||||||||  ||||| ||| ||| ||| |  |||||||| |||||||||||    
T  38750389 ttctttgatatagcttataaaaacaacttatatcatatacaaaaacattttaacattattttttctctgcctataaaaatagcttatgca 38750300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 1058229 - 1058273
Alignment:
Q  228 taagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    |||||||||||||||||| |||||||||| || ||||| ||||||    
T  1058229 taagcgcttgtgctataagctgcaaataagctgtttattcaaaca 1058273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 15180610 - 15180483
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatt 198  Q
    |||||||||| |||| |||||| | |||||||||| |||||||  ||||||| ||||  ||| || ||||| ||| |||||||| || |||||  ||  |    
T  15180610 gacaattttc-caagtttttttaaacttattttcagaagttctccaatatagcttatagaaacaacttataacatttacaaaaataatttaacgatacgt 15180512  T
Q  199 tatcttttgctataaaactagcttatgca 227  Q
    ||||||||||| || || || ||||||||    
T  15180511 tatcttttgctgtacaaataacttatgca 15180483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 29056014 - 29056122
Alignment:
Q  122 agcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagct 221  Q
    |||||||||||| ||| |||| |  |||| |||| |||||| ||  || | ||||  |||||||||| |||||| ||||||||||||| || || |||||    
T  29056014 agcttattttcataagctcttgagaataggttatgaaaatagttactaacttatatgaaaacaaattgactttattttatcttttgctctagaagtagct 29056113  T
Q  222 tatgcataa 230  Q
    ||| |||||    
T  29056114 tatacataa 29056122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 9093574 - 9093693
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaac 216  Q
    ||||||||||||||||  ||||||| ||| | || |||| |||| |  ||||||| ||||| ||||||| ||||||||| ||||||||||| |||| ||     
T  9093574 ttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaa 9093673  T
Q  217 tagcttatgcataagcgctt 236  Q
    |||||||| |||||||||||    
T  9093674 tagcttatccataagcgctt 9093693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 26694930 - 26694853
Alignment:
Q  117 ttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaacttt 194  Q
    ||||||||||||||||| |||||||| || ||||||||| |||| |||||||| |||||||  |||||| ||||||||    
T  26694930 ttttcagcttattttcataagttcttcaagatagtttatgaaaacaatttataacatatacggaaacaatttaacttt 26694853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 6536683 - 6536599
Alignment:
Q  101 caattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaa 185  Q
    ||||||||| |||||||||||| |||||||||| || ||||  ||||||| || | |||| || |||||||||||||||||||||    
T  6536683 caattttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaacaacttatagcatatacaaaaacaa 6536599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 4163206 - 4163119
Alignment:
Q  138 ttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||||||||  |||| ||||||  ||||| |||||||| |||||| ||||||||| ||||||| || |||||||| |||||||||    
T  4163206 ttctttaatataacttataaaaatagcttataacatatacacaaacaatttaactttattttatctatttctataaaaatagcttatg 4163119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 4224827 - 4224740
Alignment:
Q  138 ttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    ||||||||||||  |||| ||||||  ||||| |||||||| |||||| ||||||||| ||||||| || |||||||| |||||||||    
T  4224827 ttctttaatataacttataaaaatagcttataacatatacacaaacaatttaactttattttatctatttctataaaaatagcttatg 4224740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 8147699 - 8147646
Alignment:
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||||||||||||| | ||||||| ||||||||||||||||||| |||||||||    
T  8147699 atatacaaaaacaattcaactttattttatcttttgctataaaaatagcttatg 8147646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 18076229 - 18076138
Alignment:
Q  136 agttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    ||||||| ||||||| |||| |||| || ||||||||  || |||||||| ||||| ||| ||| ||||||||||||||| || ||||||||    
T  18076229 agttcttcaatatagcttataaaaacaacttatagcaattagaaaaacaatttaaccttattttctcttttgctataaaaataacttatgca 18076138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 33117545 - 33117475
Alignment:
Q  165 ttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||| |||||| |||||||| ||||||| | ||||| ||||||||||||| ||||||||||||||| ||||    
T  33117545 ttataacatata-aaaaacaatttaacttaattttatattttgctataaaagtagcttatgcataagtgctt 33117475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 2735144 - 2735026
Alignment:
Q  94 cttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactt 193  Q
    |||| |||| |||||| ||||| ||||| ||||||||||| ||||| || || || | |||| |||| |  ||||||  |||||||||| || |||||||    
T  2735144 cttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagattatacaaaaataatttaactt 2735045  T
Q  194 taatttatcttttgctata 212  Q
    || ||||||||||| ||||    
T  2735044 tattttatcttttgttata 2735026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 245
Target Start/End: Complemental strand, 4006736 - 4006638
Alignment:
Q  147 atagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataa 245  Q
    |||| |||| |||| || ||||||| |||| |||||||| || |||||| |||||| |||| |||| || || ||||||||||||| ||| ||||||||    
T  4006736 atagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcacttatgctataa 4006638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 3171529 - 3171574
Alignment:
Q  197 tttatcttttgctataaaactagcttatgcataagcgcttgtgcta 242  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||    
T  3171529 tttatcttttgttataaaaatagcttatgcataagcgcttatgcta 3171574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 6538433 - 6538388
Alignment:
Q  227 ataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||    
T  6538433 ataagtgcttgtgctataagctgcaaataagctatttatccaaaca 6538388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 33080657 - 33080758
Alignment:
Q  174 atacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgc-aaataatctatttatccaaaca 272  Q
    |||||||||||| || |||| |||||||| | || |||| ||  ||||||| |||||| |||| |||||||| |||| |||||| |||||||||||| ||    
T  33080657 atacaaaaacaatttgacttgaatttatcctgtgttatagaaaaagcttattcataagtgcttatgctataagctgcaaaataaactatttatccaagca 33080756  T
Q  273 tg 274  Q
    ||    
T  33080757 tg 33080758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 9604787 - 9604739
Alignment:
Q  226 cataagcgcttgtgctataatctgcaaataatctatttatccaaacatg 274  Q
    ||||| |||||||||||||| |||||||||| || ||||||||||||||    
T  9604787 cataaacgcttgtgctataaactgcaaataagctgtttatccaaacatg 9604739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 10616796 - 10616864
Alignment:
Q  188 taactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataa 256  Q
    |||||| | |||||||||| |||||||| ||| |||| |||||||  || |||||||||||||||||||    
T  10616796 taacttcattttatcttttactataaaaatagattatacataagcttttatgctataatctgcaaataa 10616864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 29274294 - 29274362
Alignment:
Q  164 tttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagc 232  Q
    |||||||| ||||  ||||||| || |||||| |||||||||||||||| || |||||||| |||||||    
T  29274294 tttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagc 29274362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 34430451 - 34430547
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaa 185  Q
    |||| |||| |||| || ||| ||||||||||||||||||||||| || ||||  || |||| |||| |||| |  ||||| |||||||||||||||    
T  34430451 aacagcttatgacatttatcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatatacaaaaacaa 34430547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 35070628 - 35070692
Alignment:
Q  77 agaacatacgagaacatcttaagacaattttcacaagcttttttcagcttattttcacaagttct 141  Q
    ||||| ||||| |||| |||| ||||||||||||||||||||||  |||| |||||| |||||||    
T  35070628 agaacttacgaaaacagcttatgacaattttcacaagcttttttgggcttgttttcataagttct 35070692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 6016380 - 6016503
Alignment:
Q  104 ttttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatct 203  Q
    |||||| ||| |||||||| |||||||| | | |||||  |||||||||||| |||| ||  | ||| ||||  |||||||| | ||||||| |||||||    
T  6016380 ttttcataagtttttttcaacttatttttatatgttctccaatatagtttataaaaacaacatgtagaatattaaaaaacaattgaactttattttatct 6016479  T
Q  204 tttgctataaaactagcttatgca 227  Q
    |||| ||| ||| || ||||||||    
T  6016480 tttgttatgaaaataacttatgca 6016503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 6909892 - 6909999
Alignment:
Q  119 ttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaacttta-atttatcttttgctataaaact 217  Q
    ||||||||| ||||| || ||||  || |||  |||| |||| || ||||||||||||||||||||| |||||||||  ||| |||||| ||||| || |    
T  6909892 ttcagcttaatttcataaattctccaagatatgttatgaaaacaacttatagcatatacaaaaacaatttaactttatttttttcttttcctatagaaat 6909991  T
Q  218 agcttatg 225  Q
    ||||||||    
T  6909992 agcttatg 6909999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 20671913 - 20671996
Alignment:
Q  147 atagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataa 230  Q
    ||||||||| |||| |||||| ||| ||||| ||||||| || |||||| ||||||||||| | || || |||||||| |||||    
T  20671913 atagtttatgaaaacaatttaaagcttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataa 20671996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 28621179 - 28621226
Alignment:
Q  168 tagcatatacaaaaacaaattaactttaatttatcttttgctataaaa 215  Q
    |||| ||||||||||||| ||||||||| ||||||||||| |||||||    
T  28621179 tagcttatacaaaaacaatttaactttattttatcttttgttataaaa 28621226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 30536475 - 30536420
Alignment:
Q  172 atatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||||||||||||| ||||| ||| |||||| |||||||||| | |||||||||||    
T  30536475 atatacaaaaacaatttaacattattttatcatttgctataataatagcttatgca 30536420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 6200602 - 6200504
Alignment:
Q  126 tattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttat 224  Q
    ||||||||  ||||||  |||||| ||||| |||| || |||||||||||||||||| || | | | ||| |||| ||||| |||||||| ||||||||    
T  6200602 tattttcattagttctccaatatattttataaaaacaagttatagcatatacaaaaataattcatcattattttaccttttactataaaagtagcttat 6200504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 24626317 - 24626239
Alignment:
Q  147 atagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatg 225  Q
    |||| |||| |||| || |||||| |||||||||||||| ||||||||  |||||| ||| ||||| || |||||||||    
T  24626317 atagcttatgaaaacaacttatagaatatacaaaaacaatttaactttgttttatcctttcctatagaaatagcttatg 24626239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 769144 - 769087
Alignment:
Q  164 tttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagct 221  Q
    |||||||| |||||||||| |||||||||||| |||| |||||| |||| || |||||    
T  769144 tttatagcttatacaaaaaaaaattaactttattttagcttttgttatagaaatagct 769087  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 9559621 - 9559678
Alignment:
Q  179 aaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 236  Q
    ||||||| |||| |||| |||||||||||||||| || || ||||| |||||||||||    
T  9559621 aaaacaatttaaatttattttatcttttgctatagaaataacttatacataagcgctt 9559678  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 30536637 - 30536686
Alignment:
Q  178 aaaaacaaattaactttaatttatcttttgctataaaactagcttatgca 227  Q
    |||||||| ||||| |||  |||||||||||||||||| |||||||||||    
T  30536637 aaaaacaatttaacgttatcttatcttttgctataaaaatagcttatgca 30536686  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 6538562 - 6538459
Alignment:
Q  119 ttcagcttattttcacaagttctttaatatagtttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaacta 218  Q
    |||| |||||||| | |||||||  |||||||  ||| |||| || |||||||||||||| |||||| |||||      ||||||||||||| |||||||    
T  6538562 ttcaacttattttaataagttctccaatatagcctataaaaacaacttatagcatatacataaacaatttaac-----attatcttttgctaaaaaacta 6538468  T
Q  219 gcttatgca 227  Q
     ||||||||    
T  6538467 acttatgca 6538459  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 31813146 - 31813059
Alignment:
Q  184 aaattaactttaatttatcttttgctataaaactagcttatgcataagcgcttgtgctataatctgcaaataatctatttatccaaaca 272  Q
    |||||||||||| ||||||||| || ||| || || | ||| ||||||||||| |||||||| ||||||| ||   |||||||||||||    
T  31813146 aaattaactttattttatcttt-gcaatataaataacatatccataagcgcttatgctataagctgcaaacaagtcatttatccaaaca 31813059  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 33259833 - 33259753
Alignment:
Q  152 ttattaaaataatttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttatgcataagc 232  Q
    |||| ||||||  ||||||||||||  ||||||   | |||| ||||||||||||| ||||||| |||||||| |||||||    
T  33259833 ttatgaaaatagcttatagcatataggaaaacagtatgacttcaatttatcttttgttataaaaatagcttatacataagc 33259753  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 33943274 - 33943214
Alignment:
Q  164 tttatagcatatacaaaaacaaattaactttaatttatcttttgctataaaactagcttat 224  Q
    |||||| ||| ||||| ||||| |||||||||||||||| |||||| | ||| ||||||||    
T  33943274 tttataacatgtacaataacaatttaactttaatttatcatttgctcttaaaatagcttat 33943214  T

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Target: scaffold0103 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 52044 - 51993
Alignment:
Q  102 aattttcacaagcttttttcagcttattttcacaagttctttaatatagttt 153  Q
    |||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  52044 aattttcaaaagcttttttcaacttattttcataagttctttaatatagttt 51993  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 22311 - 22261
Alignment:
Q  89 aacatcttaagacaattttcacaagcttttttcagcttattttcacaagtt 139  Q
    |||| |||| ||||||||||  ||||||||||||||||||||||| |||||    
T  22311 aacagcttatgacaattttcgtaagcttttttcagcttattttcataagtt 22261  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 58812 - 58751
Alignment:
Q  99 gacaattttcacaagcttttttcagcttattttcacaagttctttaatatagtttattaaaa 160  Q
    ||||||||||| |||||||||||| |||| ||||| |||||||| || |||| |||| ||||    
T  58812 gacaattttcataagcttttttcaacttaatttcataagttcttcaacatagcttatgaaaa 58751  T

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