View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9771_low_70 (Length: 249)

Name: NF9771_low_70
Description: NF9771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9771_low_70
NF9771_low_70
[»] chr5 (13 HSPs)
chr5 (20-244)||(2228881-2229094)
chr5 (91-244)||(203876-204029)
chr5 (82-209)||(1280395-1280522)
chr5 (102-244)||(27168799-27168941)
chr5 (82-215)||(3055499-3055632)
chr5 (91-244)||(23244566-23244719)
chr5 (91-221)||(26540674-26540804)
chr5 (91-244)||(22541912-22542065)
chr5 (113-244)||(22712895-22713026)
chr5 (82-244)||(11852732-11852894)
chr5 (82-244)||(8785799-8785961)
chr5 (129-212)||(19518970-19519053)
chr5 (1-32)||(2228833-2228864)
[»] scaffold0019 (1 HSPs)
scaffold0019 (82-244)||(134850-135012)
[»] chr7 (16 HSPs)
chr7 (82-244)||(26493710-26493872)
chr7 (82-240)||(19399995-19400153)
chr7 (82-240)||(27387306-27387464)
chr7 (82-244)||(45197661-45197822)
chr7 (82-215)||(9230418-9230551)
chr7 (93-240)||(38575289-38575436)
chr7 (94-245)||(23179881-23180031)
chr7 (82-215)||(8638631-8638765)
chr7 (138-244)||(25024596-25024702)
chr7 (136-244)||(14088819-14088927)
chr7 (136-244)||(14398837-14398945)
chr7 (136-244)||(25491630-25491738)
chr7 (161-244)||(9557784-9557867)
chr7 (82-244)||(18375423-18375583)
chr7 (82-172)||(43728013-43728103)
chr7 (189-244)||(10224015-10224070)
[»] chr1 (18 HSPs)
chr1 (91-244)||(9637147-9637300)
chr1 (91-243)||(35948975-35949127)
chr1 (82-244)||(25017403-25017565)
chr1 (82-244)||(40864715-40864877)
chr1 (91-244)||(14498923-14499076)
chr1 (82-244)||(30559001-30559163)
chr1 (82-244)||(48606608-48606770)
chr1 (82-244)||(52753816-52753975)
chr1 (91-244)||(21973783-21973937)
chr1 (90-244)||(30054846-30055000)
chr1 (91-244)||(26272925-26273078)
chr1 (82-166)||(17127456-17127540)
chr1 (138-244)||(17874851-17874957)
chr1 (167-240)||(11843899-11843972)
chr1 (100-244)||(32379852-32379995)
chr1 (170-244)||(41753057-41753131)
chr1 (190-241)||(170448-170500)
chr1 (167-229)||(28463197-28463259)
[»] chr8 (22 HSPs)
chr8 (91-244)||(30791454-30791607)
chr8 (82-244)||(13152390-13152552)
chr8 (82-242)||(16532630-16532789)
chr8 (81-240)||(21958528-21958687)
chr8 (129-236)||(32372022-32372129)
chr8 (82-244)||(9256406-9256568)
chr8 (82-244)||(27190788-27190950)
chr8 (129-244)||(32359486-32359601)
chr8 (82-244)||(14446849-14447011)
chr8 (107-244)||(10014431-10014568)
chr8 (129-244)||(32342880-32342995)
chr8 (129-244)||(32355367-32355482)
chr8 (91-244)||(24333740-24333896)
chr8 (136-244)||(40146006-40146114)
chr8 (91-162)||(10467790-10467861)
chr8 (114-173)||(28846667-28846726)
chr8 (132-244)||(2826302-2826411)
chr8 (82-245)||(42446935-42447105)
chr8 (190-244)||(24592333-24592387)
chr8 (131-237)||(34228232-34228338)
chr8 (190-244)||(10467876-10467930)
chr8 (184-244)||(28846724-28846784)
[»] chr6 (9 HSPs)
chr6 (82-244)||(11970977-11971138)
chr6 (82-240)||(12180525-12180683)
chr6 (91-244)||(24074438-24074591)
chr6 (96-242)||(25340476-25340621)
chr6 (107-244)||(3050905-3051044)
chr6 (91-244)||(25599178-25599334)
chr6 (82-244)||(32441970-32442129)
chr6 (129-211)||(30621237-30621318)
chr6 (114-240)||(1296558-1296684)
[»] chr2 (15 HSPs)
chr2 (107-244)||(33453184-33453321)
chr2 (91-244)||(19951827-19951980)
chr2 (91-242)||(35649658-35649809)
chr2 (91-244)||(22483575-22483728)
chr2 (91-244)||(12539600-12539752)
chr2 (91-244)||(34526378-34526532)
chr2 (143-244)||(26656337-26656437)
chr2 (91-221)||(22464696-22464826)
chr2 (129-244)||(7886654-7886767)
chr2 (94-177)||(13308745-13308828)
chr2 (82-231)||(34317482-34317625)
chr2 (129-209)||(18425992-18426072)
chr2 (150-215)||(31392485-31392550)
chr2 (188-244)||(1954952-1955008)
chr2 (184-244)||(13309708-13309768)
[»] chr4 (11 HSPs)
chr4 (82-244)||(31944633-31944795)
chr4 (114-242)||(3074418-3074546)
chr4 (82-244)||(12211222-12211384)
chr4 (82-244)||(53693030-53693192)
chr4 (82-240)||(55464660-55464818)
chr4 (82-241)||(42843724-42843886)
chr4 (129-244)||(8897922-8898037)
chr4 (82-244)||(4325429-4325590)
chr4 (82-195)||(27364900-27365013)
chr4 (129-244)||(10632640-10632757)
chr4 (184-244)||(25182875-25182935)
[»] chr3 (14 HSPs)
chr3 (91-244)||(43137153-43137305)
chr3 (82-240)||(31989046-31989204)
chr3 (82-244)||(37381865-37382027)
chr3 (91-240)||(53710424-53710573)
chr3 (82-242)||(3856874-3857034)
chr3 (132-244)||(24988809-24988921)
chr3 (91-215)||(51262005-51262129)
chr3 (82-240)||(24908393-24908551)
chr3 (94-203)||(15668002-15668111)
chr3 (129-242)||(22934797-22934910)
chr3 (184-240)||(51408609-51408665)
chr3 (190-244)||(9743393-9743447)
chr3 (189-244)||(43585933-43585988)
chr3 (91-155)||(43585843-43585907)
[»] scaffold0007 (1 HSPs)
scaffold0007 (91-244)||(259944-260097)
[»] scaffold0015 (1 HSPs)
scaffold0015 (81-240)||(214161-214320)
[»] scaffold0178 (1 HSPs)
scaffold0178 (82-215)||(17757-17890)
[»] scaffold0726 (1 HSPs)
scaffold0726 (132-244)||(950-1062)
[»] scaffold0168 (1 HSPs)
scaffold0168 (91-221)||(15840-15970)
[»] scaffold0002 (1 HSPs)
scaffold0002 (99-244)||(435344-435491)
[»] scaffold0198 (1 HSPs)
scaffold0198 (99-214)||(1430-1545)
[»] scaffold0012 (1 HSPs)
scaffold0012 (91-221)||(197131-197261)
[»] scaffold0170 (1 HSPs)
scaffold0170 (150-240)||(9161-9251)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 20 - 244
Target Start/End: Original strand, 2228881 - 2229094
Alignment:
Q  20 caatggagttaaccttcaagaccagaatagaaccttcaagactagaatagaatgtggttcaatgtggttttatgacttgatgatatattacactgagcgg 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||          ||||||||| |||||| ||||||||||||||    
T  2228881 caatggagttaactttcaagaccagaatagaaccttcaagactagaatagaatgtggtt----------ttatgactt-atgatacattacactgagcgg 2228969  T
Q  120 aagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgata 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||| ||    
T  2228970 aagatatttaagtcatttgatgatgttgatattatttgaacattcatcgcaaagaggttctaggaagggcatttacctcctaattttatttagcacgcta 2229069  T
Q  220 ttggtaggttatatttcatctctct 244  Q
    |||||||||||||||||||||||||    
T  2229070 ttggtaggttatatttcatctctct 2229094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 203876 - 204029
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||||| |||||| ||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||| || | |||| ||    
T  203876 atgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcgaacattcaccggaaagaggtctcggaaaggaca 203975  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||||||||||||||||||||  |||||  |  |||||||||||||||||    
T  203976 tttacctcctaattttatttagcacactattgacaaattatatttcatctctct 204029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 1280395 - 1280522
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  |||| |||||||||| |||||| |||||| ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| ||     
T  1280395 tgtggttcaatgatttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcgaacattcaccgcaaagaggtctcg 1280494  T
Q  182 ggaagggcatttacctcctaattttatt 209  Q
    | || |||||||||||||||||||||||    
T  1280495 gaaaaggcatttacctcctaattttatt 1280522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 27168941 - 27168799
Alignment:
Q  102 atatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctccta 201  Q
    |||| |||||| |||||| ||||||| |||||| ||||| |||||||||||||| |||||||||||| || ||||| |||  ||||||||||||||||||    
T  27168941 atatgttacaccgagcgggagatattcaagtcacttgataatgttgatattattcgaacattcaccgaaatgaggtctcataaagggcatttacctccta 27168842  T
Q  202 attttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||||||||  ||||||  |||||| ||||||||||||    
T  27168841 attttatttagcacactattggatggttatgtttcatctctct 27168799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 3055499 - 3055632
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||  |||||| ||||||| ||||||||||||||||||||||||||| ||||||||  ||||| ||||| |||    
T  3055499 tgtggttcaatgacttgatgatatgttacatcgagcgggagatattcaagtcatttgatgatgttgatattattcgaacattccgcgcaatgaggtctca 3055598  T
Q  182 ggaagggcatttacctcctaattttatttagcac 215  Q
      || |||||||||||||||||||||||||||||    
T  3055599 taaatggcatttacctcctaattttatttagcac 3055632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 244
Target Start/End: Complemental strand, 23244719 - 23244566
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||    ||||||||| ||||  ||||| |||||||||||||||||||||||||||| ||||||| ||||| |||| |||||||    
T  23244719 atgacttgatgatatgttatgtcgagcggaagttattctagtcacttgatgatgttgatattatttgaacattaaccgcaacgaggtctcagaaagggca 23244620  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||| ||||||||||||| |||  |||||  || |||||||||||||||||    
T  23244619 tgtacctgctaattttatttaccacactattgacagattatatttcatctctct 23244566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 26540804 - 26540674
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    |||| |||||||||| |||||| |||||| ||||||| || ||| |||||||  ||||||||||| ||||||||||||||||||  | |||| |||||||    
T  26540804 atgatttgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattcgaacattcaccgcaaagaaatctcagaaagggca 26540705  T
Q  191 tttacctcctaattttatttagcacgatatt 221  Q
    |||||||||||||||||| ||||||| ||||    
T  26540704 tttacctcctaattttatctagcacgctatt 26540674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 22541912 - 22542065
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||||  || ||||||||||| |||||| | ||||||||| |||||||| |||||||| |   ||||||||  | | |||||||    
T  22541912 atgacttgatgatatgttacatcgaacggaagatattcaagtcactcgatgatgttaatattattcgaacattccctcgaaagaggtcgcggaaagggca 22542011  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||| ||||||||||||||||| |||||  |||||||||||| |||||||    
T  22542012 tttacctcataattttatttagcacgctattgtcaggttatatttcttctctct 22542065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 244
Target Start/End: Complemental strand, 22713026 - 22712895
Alignment:
Q  113 tgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttag 212  Q
    |||||||  |||||| | |||| ||||||||||||||||||||  |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  22713026 tgagcgggggatattcatgtcacttgatgatgttgatattattcaaacattcaccgcaaagaggtctcagaaagagcatttacctcctaattttatttag 22712927  T
Q  213 cacgatattggtaggttatatttcatctctct 244  Q
    |||  |||||  | ||||| || |||||||||    
T  22712926 cacactattgtcatgttatgttacatctctct 22712895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 11852732 - 11852894
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| || ||| |||||||||| ||| |||||||||||||||||||| ||||||| | | ||||||||| | |    
T  11852732 tgtggttcaatgacttgatgatatgttacaccgaacgggagatatttaactcacttgatgatgttgatattattcgaacatttaacacaaagaggtctaa 11852831  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||| | |||||||| |||||||||||||||||  |||||  |  |||| ||||||||||||    
T  11852832 gaaagagtatttaccttctaattttatttagcacactattgacaaattatctttcatctctct 11852894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 8785799 - 8785961
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  |||||||||| ||||||||||   ||||| ||||||| || ||| |||||||| ||||||||||| |||||||||||||||| |||| ||     
T  8785799 tgtggttcaatgacttgataatatattacatcaagcgggagatattcaattcagttgatgatattgatattattcgaacattcaccgcaaataggtctcg 8785898  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
      |||||   |||||||||||||||||||||||   |||||  ||||||| ||||||||||||    
T  8785899 aaaagggttcttacctcctaattttatttagcatattattgacaggttatgtttcatctctct 8785961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 19519053 - 19518970
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttag 212  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||| |  | |||| |||||||| |||||||||||||||    
T  19519053 aagtcacttgatgatgttgatattattcgaacattcaccgcaaagaggtattggaaaggtcatttaccacctaattttatttag 19518970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2228833 - 2228864
Alignment:
Q  1 atgttattgagattgttaacaatggagttaac 32  Q
    ||||||||||||||||||||||||||||||||    
T  2228833 atgttattgagattgttaacaatggagttaac 2228864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 135012 - 134850
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| |||||| ||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||| ||     
T  135012 tgtggttaaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcgaacattcaccggaaagaggtctcg 134913  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  134912 gaaagggcatttacctcctaattttatttagcacgctattgataggttatatttcatctctct 134850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 6e-49; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 26493872 - 26493710
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||  |||||| |||||| ||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||| ||     
T  26493872 tgtggttaaatgacttgatgatacgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcgaacattcaccgtaaagaggtctcg 26493773  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||    
T  26493772 gaaagggcatttacctcctaattttatttagcacgctattgacaggttatatttcatctctct 26493710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 240
Target Start/End: Original strand, 19399995 - 19400153
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| |||||| ||||||| |||||  |||||||||||||||||||| ||||||||||   ||||||||  |     
T  19399995 tgtggttgaatgacttgatgatatgttacaccgagcgggagatattcaagtcgcttgatgatgttgatattattcgaacattcactcgaaagaggtcgcg 19400094  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
    | ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  19400095 gaaagggtatttacctcctaattttatttagcacgctattggcaggttatatttcatct 19400153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 240
Target Start/End: Complemental strand, 27387464 - 27387306
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| |||||| ||||||| |||||| |||||||||||||||||||| ||||||||||   ||||||||  |     
T  27387464 tgtggttgaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcgaacattcactcgaaagaggtcgcg 27387365  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
    | ||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  27387364 gaaagagcatttacctcctaattttatttagcacgctattgacaggttatatttcatct 27387306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 45197661 - 45197822
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  |||||||||||||||||| ||  |||| | ||||||| |||||| |||| |||||||||||| || ||||||||||| ||||||||| ||     
T  45197661 tgtggttcaatgacttgatgatatatt-catcgagcaggagatattcaagtcacttgacgatgttgatattgttcgaacattcaccacaaagaggtctcg 45197759  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    || ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||    
T  45197760 gggagggcatttacatcctaattttatttagcaccctattggtaggttatatttcatctctct 45197822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 9230418 - 9230551
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||  |||||| ||||| | ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||     
T  9230418 tgtggttcaatgacttgatgatatgttacatagagcgggagatactcaagtcatttgatgatgttgatattattcgaacattcatcgcaaagaggtatcg 9230517  T
Q  182 ggaagggcatttacctcctaattttatttagcac 215  Q
      ||||||||||||||||||||||||||||||||    
T  9230518 aaaagggcatttacctcctaattttatttagcac 9230551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 38575436 - 38575289
Alignment:
Q  93 gacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatt 192  Q
    ||||||||||||| |||||| |||||| ||||||| |||||| |||||||||||||||||||| ||||||||||   ||||||||  | | |||  ||||    
T  38575436 gacttgatgatatgttacaccgagcgggagatattaaagtcacttgatgatgttgatattattcgaacattcactcgaaagaggtcgcggaaagaacatt 38575337  T
Q  193 tacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||    
T  38575336 tacctcctaattttatttagcacgctattgacaggttatatttcatct 38575289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 245
Target Start/End: Complemental strand, 23180031 - 23179881
Alignment:
Q  94 acttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcattt 193  Q
    |||||||||||| |||||| |||||  ||||||| ||| || ||||| |||||||||||||| ||||||||||||||||||||| |  | ||||||||||    
T  23180031 acttgatgatatgttacaccgagcgagagatattcaaggcacttgataatgttgatattattcgaacattcaccgcaaagaggtcttggaaagggcattt 23179932  T
Q  194 acctcctaattttatttagcacgatattggtaggttatatttcatctctctc 245  Q
    | |||||||||| |||||||||  |||||  | ||||| |||||||||||||    
T  23179931 a-ctcctaatttaatttagcacactattgacaagttatgtttcatctctctc 23179881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 8638631 - 8638765
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaaga-ggtttc 180  Q
    |||||||| || |||||||||||| ||| || || |   ||||||| ||||||||||||||| | ||||||||| ||||||||| |||||||| ||| ||    
T  8638631 tgtggtttaattacttgatgatatgttataccgaacaagagatattcaagtcatttgatgatatcgatattattcgaacattcaacgcaaagagggtctc 8638730  T
Q  181 aggaagggcatttacctcctaattttatttagcac 215  Q
     | ||||||||||||||||||||||||||||||||    
T  8638731 ggaaagggcatttacctcctaattttatttagcac 8638765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 25024596 - 25024702
Alignment:
Q  138 gatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttca 237  Q
    |||||||||||||   || | ||||||||| ||||||||| |||| |||||||||||||||||||||||||| |||| | |||||  | |||||||||||    
T  25024596 gatgatgttgataagtttcggacattcaccacaaagaggtctcagaaagggcatttacctcctaattttattaagcatgttattgacatgttatatttca 25024695  T
Q  238 tctctct 244  Q
    |||||||    
T  25024696 tctctct 25024702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 14088819 - 14088927
Alignment:
Q  136 ttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatattt 235  Q
    ||||||||| ||||||||||  ||||| || ||||||||||| || | || |||||||||||||||||||||||||||||  |||||  | |||||||||    
T  14088819 ttgatgatgctgatattattcaaacatccatcgcaaagaggtctcggaaaaggcatttacctcctaattttatttagcacactattgacaagttatattt 14088918  T
Q  236 catctctct 244  Q
    ||| |||||    
T  14088919 catatctct 14088927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 14398837 - 14398945
Alignment:
Q  136 ttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatattt 235  Q
    ||||||||| ||||||||||  ||||| || ||||||||||| || | || |||||||||||||||||||||||||||||  |||||  | |||||||||    
T  14398837 ttgatgatgctgatattattcaaacatccatcgcaaagaggtctcggaaaaggcatttacctcctaattttatttagcacactattgacaagttatattt 14398936  T
Q  236 catctctct 244  Q
    ||| |||||    
T  14398937 catatctct 14398945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 25491738 - 25491630
Alignment:
Q  136 ttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatattt 235  Q
    |||||||||||||||||||| |||||||||| | |||||||| |||  || ||||||||| |||| |||||||||| |||  |||||  | |||||||||    
T  25491738 ttgatgatgttgatattattcgaacattcactgtaaagaggtctcaaaaaaggcatttacttcctgattttatttatcacactattgacatgttatattt 25491639  T
Q  236 catctctct 244  Q
    ||| |||||    
T  25491638 catatctct 25491630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 9557784 - 9557867
Alignment:
Q  161 attcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||||||||||| || | ||||| ||||||||||||||||||||||||||  |||| | ||||||  ||||||||||||    
T  9557784 attcaccgcaaagaggtctctgaaaggggatttacctcctaattttatttagcacactattcggaggttaagtttcatctctct 9557867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 18375423 - 18375583
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  |||||||||||||||||||||  |||||| ||||||| || ||| | ||| |||||||||||||| |||||||||  || || |||| ||     
T  18375423 tgtggttcaatgacttgatgatatattacatggagcgggagatattcaaatcactagataatgttgatattattcgaacattca-tgcgaa-aggtctcg 18375520  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
      |||||||||||| ||||||||  |||||||||  | ||||||| |||| |||||| |||||    
T  18375521 aaaagggcatttacttcctaattcgatttagcacacttttggtagattatgtttcatttctct 18375583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 43728013 - 43728103
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaa 172  Q
    |||||||  ||||||||||||||| ||| |  || ||| ||||||| |||||| ||||||||||||||||||||  |||||||| ||||||    
T  43728013 tgtggttcaatgacttgatgatatgttatatcgaacgggagatattcaagtcagttgatgatgttgatattattcaaacattcatcgcaaa 43728103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 10224015 - 10224070
Alignment:
Q  189 catttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||||||||||||||||| |||  ||| || || |||||||||||||||||    
T  10224015 catttacctcctaattttatttaccacactatcggcagattatatttcatctctct 10224070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 9637147 - 9637300
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||||| ||||||  |||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || | |||||||    
T  9637147 atgacttgatgatatgttacaccgagcgggtgatattcaagtcacttgatgatgttgatattatttgaacattcaccgcaaagaggtctcggaaagggca 9637246  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||| |||||||||||||||||||  ||||| |||||||| ||||||||||||    
T  9637247 tttacatcctaattttatttagcacactattgataggttatgtttcatctctct 9637300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 91 - 243
Target Start/End: Complemental strand, 35949127 - 35948975
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||||| |||||| ||||||| |||||| |||||||||||||| ||||| |||||||||||| |||||||| || | |||| ||    
T  35949127 atgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatgttattcgaacattcaccgaaaagaggtctcggaaaggaca 35949028  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctc 243  Q
    |||||||||||||||||||| ||||| ||| | ||| ||||||||||||||||    
T  35949027 tttacctcctaattttattttgcacgctatagatagattatatttcatctctc 35948975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 25017403 - 25017565
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| |||||  ||||||| || ||| |||||||||||||||||||| |||| |||||||||||||||| |||    
T  25017403 tgtggttcaatgacttgatgatatcttacaccgagcgagagatattcaaatcacttgatgatgttgatattattcgaacgttcaccgcaaagaggtctca 25017502  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | |||||||| |||||||||||||||||||||||  |||||  |||||||||  |||||||||    
T  25017503 gaaagggcatatacctcctaattttatttagcacactattgacaggttatatcacatctctct 25017565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 40864877 - 40864715
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| || ||   |||||| |||||| ||||| |||||||||||||| ||||||||||||||||||||||| |    
T  40864877 tgtggttcaatgacttgatgatatcttacaccgaacgagggatattcaagtcacttgataatgttgatattattcgaacattcaccgcaaagaggtttta 40864778  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||||||||||||||||||||||||||||  ||||   ||||||| || |||||||||    
T  40864777 gaaagggcatttacctcctaattttatttagcacactattaacaggttatgttacatctctct 40864715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 14498923 - 14499076
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||||  |||||| ||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| |||| ||    
T  14498923 atgacttgatgatatcttacatcgagcgggagatattcaagtcatttgatgatgttgatattattcgaacattcatcgcaaagaggtctcagaaaggaca 14499022  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||||||||| ||||||  ||  |||||  | ||||| ||||||||||||    
T  14499023 tttacctcctaattatatttaaaacactattgacaagttatgtttcatctctct 14499076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 30559163 - 30559001
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    ||||||| |||||||||||||||| |||||| |||||  ||||||| |||||| ||||||||| |||||||||| |||||||||||| ||| || | |||    
T  30559163 tgtggttctatgacttgatgatatgttacaccgagcgagagatattcaagtcacttgatgatgctgatattattcgaacattcaccgtaaatagatctca 30559064  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
      || |  ||||||||||||||||||||||||||  ||||||||| |||| ||||||||||||    
T  30559063 taaatgatatttacctcctaattttatttagcacactattggtagattatgtttcatctctct 30559001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 48606770 - 48606608
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| |||||| ||||||| |||| | ||||| ||||||||||||||  |||| ||||||||||||||| |      
T  48606770 tgtggttcaatgacttgatgatatgttacaccgagcgggagatattcaagtaacttgataatgttgatattattcaaacactcaccgcaaagaggtcttc 48606671  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||||||||||| ||||||||||||||||  |||||| || |||| ||||||||||||    
T  48606670 gaaagggcatttacctcataattttatttagcacactattggcagattatgtttcatctctct 48606608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 52753975 - 52753816
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||  || ||| ||||||| ||||||||||||||||||||||||||| |||||||   ||||||||||| ||     
T  52753975 tgtggttcaatgacttgatgatatgttacatcgaacgggagatattcaagtcatttgatgatgttgatattattcgaacatt---cgcaaagaggtctcg 52753879  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||| ||||||||||||||||||| ||||||  |||||  | ||||| ||||||||||||    
T  52753878 gaaagggtatttacctcctaattttatctagcacactattgacaagttatgtttcatctctct 52753816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 244
Target Start/End: Complemental strand, 21973937 - 21973783
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    |||| |||||||||| ||||||||||||| ||||||| || ||| |||||||  ||||||||||| ||||||||||||||||||  | || | |||||||    
T  21973937 atgatttgatgatatgttacactgagcgggagatattcaaatcacttgatgacattgatattattcgaacattcaccgcaaagaaatctcggaaagggca 21973838  T
Q  191 tttacctcctaattttatttagcacgata-ttggtaggttatatttcatctctct 244  Q
    |||||||||||||||||| ||||| | || |||| |||| ||||| |||||||||    
T  21973837 tttacctcctaattttatctagcatgctatttggcaggtaatattccatctctct 21973783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 244
Target Start/End: Original strand, 30054846 - 30055000
Alignment:
Q  90 tatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggc 189  Q
    |||||||| ||||||| |||||| |||||| ||||||| |||||| ||||| || |||| |||||| |||| ||| |||||||||||| |||  || | |    
T  30054846 tatgacttaatgatatgttacaccgagcgggagatattcaagtcacttgatcatattgacattattcgaaccttctccgcaaagaggtatcataaatgac 30054945  T
Q  190 atttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||||||||||||||||||||  |||||  | ||||| ||||||||||||    
T  30054946 atttacctcctaattttatttagcacattattgacacgttatgtttcatctctct 30055000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 91 - 244
Target Start/End: Complemental strand, 26273078 - 26272925
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    |||| |||||||||| |||||  |||| | ||||||| ||||||  |||||||||| |||||||| ||||||||| |||||| |||| || | |||||||    
T  26273078 atgatttgatgatatgttacatcgagcaggagatattcaagtcacgtgatgatgttaatattattcgaacattcatcgcaaacaggtctcggaaagggca 26272979  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
     |||||| |||||||||||||||||  |||||| | |||||||||||| |||||    
T  26272978 attacctactaattttatttagcacactattggcatgttatatttcatatctct 26272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 17127456 - 17127540
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcac 166  Q
    |||||||  ||||||||||||||| |||||| |||||| ||||||| |||||  |||||||||||||||||||| ||||||||||    
T  17127456 tgtggttgaatgacttgatgatatgttacaccgagcgggagatattcaagtcgcttgatgatgttgatattattcgaacattcac 17127540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 17874851 - 17874957
Alignment:
Q  138 gatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttca 237  Q
    ||||||||||||||||||  |||||||||||||||||||| ||   |||  ||||||||| ||||||||||||| |||  |||||  || ||||||||||    
T  17874851 gatgatgttgatattattcaaacattcaccgcaaagaggtctcgaaaagatcatttaccttctaattttatttaccacactattgacagattatatttca 17874950  T
Q  238 tctctct 244  Q
    |||||||    
T  17874951 tctctct 17874957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 11843972 - 11843899
Alignment:
Q  167 cgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
    |||||| |||| || | |||| |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11843972 cgcaaataggtctctgaaaggacatttacctcctaattttatttagcacactattggtaggttatatttcatct 11843899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 244
Target Start/End: Complemental strand, 32379995 - 32379852
Alignment:
Q  100 tgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcc 199  Q
    |||||| ||||||  | ||| ||||||| || ||| |||||||||||||||||||| ||||||| || |||||||||| ||   || | |||||||||||    
T  32379995 tgatatgttacaccaaacgggagatattcaattcacttgatgatgttgatattattcgaacatttac-gcaaagaggtatcgaaaatgacatttacctcc 32379897  T
Q  200 taattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||||||||||  |||||  |||||||  |||| ||||||    
T  32379896 taattttatttagcacactattgacaggttatgattcacctctct 32379852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 41753057 - 41753131
Alignment:
Q  170 aaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||  ||| || |||||||| ||  ||||||||||||||||| |||||||||||||||||| ||||||||    
T  41753057 aaagaggtcgcagaaatggcatttatcttataattttatttagcacgttattggtaggttatattttatctctct 41753131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 170500 - 170448
Alignment:
Q  190 atttacctcctaattttatttagcacgatattgg-taggttatatttcatctc 241  Q
    ||||||||||||||||||||||||||  ||||||  |||||||||||||||||    
T  170500 atttacctcctaattttatttagcacattattggcaaggttatatttcatctc 170448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 28463197 - 28463259
Alignment:
Q  167 cgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggtt 229  Q
    ||||||||||| |  | ||||||||| ||||||||||||||||||||||  ||||||| ||||    
T  28463197 cgcaaagaggtcttggaaagggcattcacctcctaattttatttagcacactattggtgggtt 28463259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 91 - 244
Target Start/End: Complemental strand, 30791607 - 30791454
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||||| |||||| ||||||| |||||| |||||||  ||||||||||| ||||||||||||||||||||| || | |||||||    
T  30791607 atgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgacattgatattattcgaacattcaccgcaaagaggtctcggaaagggca 30791508  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||| ||||||||||||||||||| |||||  ||||||||||||||||||||    
T  30791507 tttaccacctaattttatttagcacgctattgacaggttatatttcatctctct 30791454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 13152552 - 13152390
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||  |||||| ||||||| ||||||||||||||||||| |||||||  |||||||| ||||||||||| ||     
T  13152552 tgtggttcaatgacttgatgatatgttacatcgagcgggagatattcaagtcatttgatgatgttggtattattccaacattcatcgcaaagaggtctcg 13152453  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||||||||||||||||||||||||||||  |||||  | ||||| ||||||||||||    
T  13152452 gaaagggcatttacctcctaattttatttagcacactattgacaagttatgtttcatctctct 13152390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 16532789 - 16532630
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| ||| ||  || |  ||||||| |||||| ||||||||||||||||||||  |||||||||||||||||| | ||     
T  16532789 tgtggttcaatgacttgatgatatgttataccaagtgagagatattcaagtcacttgatgatgttgatattattcaaacattcaccgcaaagagatatcg 16532690  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctct 242  Q
    | ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  16532689 gaaagggcatttacctcctaattttatttagcacgctattgct-ggttatatttcatctct 16532630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 240
Target Start/End: Original strand, 21958528 - 21958687
Alignment:
Q  81 atgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttc 180  Q
    ||||||||  ||||||||||||||| |||||| |||| | |||||||  ||||| |||||||||||||||||||| ||||||| ||   ||||||||  |    
T  21958528 atgtggttgaatgacttgatgatatgttacaccgagcaggagatattcgagtcacttgatgatgttgatattattcgaacattaactcaaaagaggtcgc 21958627  T
Q  181 aggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
     | ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  21958628 ggaaagggaatttacctcctaattttatttagcacgctattggcaggttatatttcatct 21958687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 129 - 236
Target Start/End: Original strand, 32372022 - 32372129
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggt 228  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||| |||  |||| |||||||||||||||||||||||||||  |||||||||||    
T  32372022 aagtcacttgatgatgttgatattattcgaacattcaccgcaaagaggtctcaaaaaggtcatttacctcctaattttatttagcacactattggtaggt 32372121  T
Q  229 tatatttc 236  Q
    ||||||||    
T  32372122 tatatttc 32372129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 9256406 - 9256568
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||| ||||||||||||||| |||||  |||||| ||||||| |||||| |||||||||||||||| ||| ||||||||| ||||||||||| ||     
T  9256406 tgtggtttaatgacttgatgatatgttacatcgagcgggagatattcaagtcacttgatgatgttgatataattcgaacattcatcgcaaagaggtctcg 9256505  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
      || | |||||||||||||||||||||||||||  |||||  | ||||| ||||||||||||    
T  9256506 caaatgacatttacctcctaattttatttagcacactattgacaagttatgtttcatctctct 9256568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 27190788 - 27190950
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| || |||  ||||| ||||||| |||||| |||||||||||||||||| | ||| |||||||||||||| || |||    
T  27190788 tgtggttcaatgacttgatgatatgttgcacctagcgggagatattcaagtcacttgatgatgttgatattactcgaatattcaccgcaaagatgtctca 27190887  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | |||| |||||||||||||||||||||||| ||  |||||| | ||||| ||||||||||||    
T  27190888 gaaaggacatttacctcctaattttatttagtacactattggcaagttatgtttcatctctct 27190950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 32359486 - 32359601
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggt 228  Q
    |||||| |||||||||||||||||||| |||||||||| |||||||||| |||  || | |||||||||||||||||||||||||||  ||||||||| |    
T  32359486 aagtcacttgatgatgttgatattattcgaacattcactgcaaagaggtctcaaaaatgtcatttacctcctaattttatttagcacactattggtagat 32359585  T
Q  229 tatatttcatctctct 244  Q
    ||||||||||||||||    
T  32359586 tatatttcatctctct 32359601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 14446849 - 14447011
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| ||||||  || |  ||||||| |||||| ||||||||||||||||||||  ||||||||| |||||||||| ||     
T  14446849 tgtggttcaatgacttgatgatatgttacaccaagagagagatattcaagtcacttgatgatgttgatattattctaacattcactgcaaagaggtctcg 14446948  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | |||| |||| ||||||||||||||||||||||  ||||| | ||||| |||||||||||||    
T  14446949 gaaaggacattcacctcctaattttatttagcacactattgatcggttacatttcatctctct 14447011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 244
Target Start/End: Complemental strand, 10014568 - 10014431
Alignment:
Q  107 ttacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaatttt 206  Q
    |||||| |||||||||||||| | |||| ||||||||||||||||||||  ||||||||||| |||||| |||  | |||||||||||||||||||||||    
T  10014568 ttacaccgagcggaagatattcatgtcacttgatgatgttgatattattcaaacattcaccggaaagagattttggaaagggcatttacctcctaatttt 10014469  T
Q  207 atttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||||  |||||  |  |||||||||||||||||    
T  10014468 atttagcacattattgacatattatatttcatctctct 10014431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 32342880 - 32342995
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggt 228  Q
    |||||| |||||||||||||||||||| |||||||||| ||||| |||| |||  |||| |||||||||||||||||||||||||||   ||||||| ||    
T  32342880 aagtcacttgatgatgttgatattattcgaacattcactgcaaaaaggtctcaaaaaggtcatttacctcctaattttatttagcacaccattggtatgt 32342979  T
Q  229 tatatttcatctctct 244  Q
    ||||||||||||||||    
T  32342980 tatatttcatctctct 32342995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 32355367 - 32355482
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggt 228  Q
    |||||| |||||||||||||||||||| |||||||||| ||||| |||| |||  |||| |||||||||||||||||||||||||||   ||||||| ||    
T  32355367 aagtcacttgatgatgttgatattattcgaacattcactgcaaaaaggtctcaaaaaggtcatttacctcctaattttatttagcacaccattggtatgt 32355466  T
Q  229 tatatttcatctctct 244  Q
    ||||||||||||||||    
T  32355467 tatatttcatctctct 32355482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 24333740 - 24333896
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaac---attcaccgcaaagaggtttcaggaagg 187  Q
    ||||||| ||||||| ||||||||||||| ||||||| |||||| ||||||||||| |||||||| ||||   ||||||| ||||||||| || | |||     
T  24333740 atgactttatgatatgttacactgagcgggagatattcaagtcacttgatgatgttaatattattcgaacattattcaccacaaagaggtctcggaaaga 24333839  T
Q  188 gcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||||| | ||||||||||||||  |||||   |||||| ||||||||||||    
T  24333840 gaatttacctcatgattttatttagcacactattgaccggttatgtttcatctctct 24333896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 40146114 - 40146006
Alignment:
Q  136 ttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatattt 235  Q
    |||||||||||||||||||| ||||||||||  ||||||||| || | || ||||| |||||||||||||||||||||||  |||||| || |||| |||    
T  40146114 ttgatgatgttgatattattcgaacattcacaacaaagaggtctcggaaatggcatctacctcctaattttatttagcacactattggcagattatgttt 40146015  T
Q  236 catctctct 244  Q
    |||||||||    
T  40146014 catctctct 40146006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 10467790 - 10467861
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacat 162  Q
    ||||||||||||||| |||||  |||||| ||||| | ||||||||||||||||||||||||||| ||||||    
T  10467790 atgacttgatgatatgttacatcgagcgggagataatcaagtcatttgatgatgttgatattattcgaacat 10467861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 28846667 - 28846726
Alignment:
Q  114 gagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaag 173  Q
    |||||| ||||||| |||||| |||||||||||||||||||| |||||||||||||||||    
T  28846667 gagcgggagatattcaagtcacttgatgatgttgatattattcgaacattcaccgcaaag 28846726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 244
Target Start/End: Complemental strand, 2826411 - 2826302
Alignment:
Q  132 tcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttat 231  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| || | | |||||||||    |||||||||||||||||  ||| | || |||||    
T  2826411 tcatttgataatgttgatattattcgaacattcaccgcaaagaggtatcggcatgggcattta---tctaattttatttagcacactatggatatgttat 2826315  T
Q  232 atttcatctctct 244  Q
    || |||| |||||    
T  2826314 atgtcatgtctct 2826302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 245
Target Start/End: Original strand, 42446935 - 42447105
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttg-----aacattcacc--gcaaaga 174  Q
    |||||||  ||||| |||| |||| |||||  |||||||||||||| |||||| ||||||| ||| ||||||||||     ||||||||||  | ||| |    
T  42446935 tgtggttgaatgacgtgattatatgttacatcgagcggaagatattcaagtcacttgatgacgtttatattatttgaacataacattcaccgtgtaaaaa 42447034  T
Q  175 ggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctctc 245  Q
    ||| ||   ||  ||||||||||||||||||||||||||||  || ||  | |||||||||||||||||||    
T  42447035 ggtatcgaaaaatgcatttacctcctaattttatttagcacactaatgacaagttatatttcatctctctc 42447105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 24592387 - 24592333
Alignment:
Q  190 atttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||||||||||||||||||||  |||||| ||||||| ||||||||||||    
T  24592387 atttacctcctaattttatttagcacactattggcaggttatgtttcatctctct 24592333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 34228338 - 34228232
Alignment:
Q  131 gtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggtta 230  Q
    |||| |||||||||||||||||||| ||||||| ||| ||||||||| |  | ||  ||||||||||||| |||||||||| |||  |||||  | ||||    
T  34228338 gtcacttgatgatgttgatattattcgaacatttaccacaaagaggtcttggaaattgcatttacctcctcattttatttatcacattattgacatgtta 34228239  T
Q  231 tatttca 237  Q
    |||||||    
T  34228238 tatttca 34228232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 10467876 - 10467930
Alignment:
Q  190 atttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||| |||||||||||||||| ||||||  | ||||| ||||||||||||    
T  10467876 atttacctcataattttatttagcacaatattgacaagttatgtttcatctctct 10467930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 28846724 - 28846784
Alignment:
Q  184 aagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||||||||| ||||||||||||||||  | |||  || |||| ||||||||||||    
T  28846724 aagggcatttacctcataattttatttagcacacttttgacagattatgtttcatctctct 28846784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 11970977 - 11971138
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  |||||||||| |||| |||||| |||||||||||||| |||||| ||||||||||||||||| |  |||||||||||| |||||||| |||    
T  11970977 tgtggttcaatgacttgatcatatgttacaccgagcggaagatattcaagtcacttgatgatgttgatattttgcgaacattcaccg-aaagaggtctca 11971075  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||||||||||||||||||||||||||||  |||||  ||||||| ||||||||||||    
T  11971076 gaaagggcatttacctcctaattttatttagcacactattgacaggttatgtttcatctctct 11971138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 240
Target Start/End: Complemental strand, 12180683 - 12180525
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| ||| || ||| ||| |||||| |||||| ||||||||||||| ||||||||||||||||||||| ||     
T  12180683 tgtggttcaatgacttgatgatatgttacaccgagtgggagaaattcaagtcacttgatgttgttgatattattcgaacattcaccgcaaagaggtctcg 12180584  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
    |||||||||||||||| |||||||||||||||||  |||||  ||||||| ||||||||    
T  12180583 ggaagggcatttaccttctaattttatttagcacattattgacaggttatgtttcatct 12180525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 24074438 - 24074591
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattc-accgcaaagaggtttcaggaagggc 189  Q
    ||||||||||||||| |||||| ||| || ||||||| |||| | |||||||||||||||||||| |||||||| |||| |||||||| || |||| | |    
T  24074438 atgacttgatgatatgttacaccgagggggagatattcaagttacttgatgatgttgatattattcgaacattcaaccggaaagaggtctc-ggaatgac 24074536  T
Q  190 atttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||||||||||||||||||||| | |||  || |||||||||||||||||    
T  24074537 atttacctcctaattttatttagcacgtttttgacagattatatttcatctctct 24074591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 96 - 242
Target Start/End: Original strand, 25340476 - 25340621
Alignment:
Q  96 ttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttac 195  Q
    |||||||||| ||||||  || ||||||||||||||||| |||||||||||||||||||| |||||||||||  |||||||| |||| ||| ||||||||    
T  25340476 ttgatgatatgttacacccagtggaagatatttaagtcacttgatgatgttgatattattcgaacattcaccataaagaggtctcagaaagtgcatttac 25340575  T
Q  196 ctcctaattttatttagcacgatattggtaggttatatttcatctct 242  Q
    |||||||||||| ||| |||  |||||| || |||| ||||||||||    
T  25340576 ctcctaatttta-ttaacacactattggcagattatgtttcatctct 25340621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 244
Target Start/End: Original strand, 3050905 - 3051044
Alignment:
Q  107 ttacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaatttt 206  Q
    |||||| |||||| ||||||| |||||| ||||||||||||||||||||  ||||||||||| |||||||| || | ||| ||||||||| |||||||||    
T  3050905 ttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcaaacattcaccggaaagaggtctcggaaagagcatttaccacctaatttt 3051004  T
Q  207 atttagcacgatattggta--ggttatatttcatctctct 244  Q
    |||||||||  |||||  |  |||||||||||||||||||    
T  3051005 atttagcacactattgacacgggttatatttcatctctct 3051044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 25599178 - 25599334
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcacc---gcaaagaggtttcaggaagg 187  Q
    ||||||||||| ||| |||||  ||| || ||||| | |||||| |||||||||||||||||||| ||||||||| |   |||||||||| || | ||||    
T  25599178 atgacttgatggtatgttacatcgagtgggagataatcaagtcacttgatgatgttgatattattcgaacattcatcatcgcaaagaggtctcggaaagg 25599277  T
Q  188 gcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||| ||||||||| ||||| |||  |||||| | ||||||||||||||||||    
T  25599278 gcatttacgtcctaatttgatttaacacactattggcaagttatatttcatctctct 25599334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 32442129 - 32441970
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||| ||||||| |||||  |||||||||||| | |  ||| |||||||||||||||||||| ||||||||| | ||||||||| ||     
T  32442129 tgtggttcaatgactt-atgatatgttacatcgagcggaagataataa--tcacttgatgatgttgatattattcgaacattcatcccaaagaggtatcg 32442033  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||||||||||| ||||||||||||||||   ||||| | ||||| ||| ||||||||    
T  32442032 gaaagggcatttacctcttaattttatttagcacaccattggcaagttatgttttatctctct 32441970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 30621237 - 30621318
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttattta 211  Q
    |||||| |||||||||||||||||||| ||||||||| || |||||||| || | |||| |||||||||||||||||||||||    
T  30621237 aagtcacttgatgatgttgatattattcgaacattcatcg-aaagaggtctcggaaaggacatttacctcctaattttattta 30621318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 240
Target Start/End: Original strand, 1296558 - 1296684
Alignment:
Q  114 gagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagc 213  Q
    |||||| ||||||| |||||| |||||||| || ||||||||  || ||||||   |||||||| || | |||| |||||||||||| |||||||||| |    
T  1296558 gagcgggagatattcaagtcacttgatgatattaatattattcaaatattcacaataaagaggtctcggaaaggccatttacctccttattttatttacc 1296657  T
Q  214 acgatattggtaggttatatttcatct 240  Q
    ||  ||| || ||||||||||||||||    
T  1296658 acactatcggcaggttatatttcatct 1296684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 244
Target Start/End: Complemental strand, 33453321 - 33453184
Alignment:
Q  107 ttacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaatttt 206  Q
    |||||| |||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  33453321 ttacaccgagcgggagatatttaagtcacttgatgatgttgatattattcgaacattcaccgcaaagaggtatcagaaagagcatttacctcctaatttt 33453222  T
Q  207 atttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||   |||||| | |||||||||||| |||||    
T  33453221 atttagcagactattggcaagttatatttcatatctct 33453184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 244
Target Start/End: Complemental strand, 19951980 - 19951827
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||| ||||| | ||||||||||  ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| ||   |||||||    
T  19951980 atgacttgacgatatgtcacactgagcgagagatattcaagtcacttgatgatgttgatattattcgaacattcaccgcaaagaggtctcgaaaagggca 19951881  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||| ||||||| |||||||||  |||||  |||||||||||||| |||||    
T  19951880 tttaccttctaatttaatttagcacactattgacaggttatatttcatatctct 19951827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 35649809 - 35649658
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||||| |||||| ||||||| |||||||||||||||||||||||||||  ||||||||| |||||||| | ||   |||| ||    
T  35649809 atgacttgatgatatgttacaccgagcgggagatattcaagtcatttgatgatgttgatattattgaaacattcactgcaaagagatctcgaaaaggaca 35649710  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctct 242  Q
    ||||| |||||||||||||||| ||  | ||| |||||||||||||||||||    
T  35649709 tttacttcctaattttatttagtacatttttgataggttatatttcatctct 35649658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 22483575 - 22483728
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||||| |||||| ||||||| || ||| |||||||  ||||||||||| ||||||||||||||||||  | || | |||||||    
T  22483575 atgacttgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattcgaacattcaccgcaaagaaatctcggaaagggca 22483674  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||||||||||||| ||||||| |||| | |||| ||||| |||||||||    
T  22483675 tttacctcctaattttatctagcacgctatttgcaggtaatattccatctctct 22483728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 12539600 - 12539752
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| ||| || ||||  |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| |  | |||  ||    
T  12539600 atgacttgatgatatgtta-accgagcataagatattcaagtcacttgatgatgttgatattattcgaacattcaccgcaaagaggtcttggaaagaaca 12539698  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||||||||||||||||||||  |||||  | ||||| ||||||||||||    
T  12539699 tttacctcctaattttatttagcacactattgacacgttatgtttcatctctct 12539752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 34526378 - 34526532
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    |||| |||||||||| |||||| |||||| ||||||| || ||| |||||||  ||||||||||| ||||||||||||||||||  | || | |||||||    
T  34526378 atgatttgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattcgaacattcaccgcaaagaaatctcggaaagggca 34526477  T
Q  191 tttacctcctaattttatttagcacgata-ttggtaggttatatttcatctctct 244  Q
    |||||||||||||||||| ||||||| || |||| |||| ||||| |||||||||    
T  34526478 tttacctcctaattttatctagcacgctatttggcaggtaatattccatctctct 34526532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 244
Target Start/End: Complemental strand, 26656437 - 26656337
Alignment:
Q  143 tgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctct 242  Q
    ||||||||||||| ||||||||||||||||||| | | || |||| |||||||||||||||||||||| ||||  |||| ||||||||||||||||||||    
T  26656437 tgttgatattattcgaacattcaccgcaaagagatcttag-aaggtcatttacctcctaattttatttcgcacactattagtaggttatatttcatctct 26656339  T
Q  243 ct 244  Q
    ||    
T  26656338 ct 26656337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 22464696 - 22464826
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    |||| |||||||||| |||||| |||||| ||||||| || ||| |||||||  |||||||||||  |||||||||||||||||  | ||   |||||||    
T  22464696 atgatttgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattcaaacattcaccgcaaagaaatctcgaaaagggca 22464795  T
Q  191 tttacctcctaattttatttagcacgatatt 221  Q
    |||||||||||||||||| ||||||| ||||    
T  22464796 tttacctcctaattttatctagcacgctatt 22464826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 7886767 - 7886654
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggt 228  Q
    |||||||  ||||||||||||  ||||  ||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||||  ||||| || ||    
T  7886767 aagtcatccgatgatgttgat--tattcaaacattcaccgcaaagaagtttcagaaaggtcacttacctcctaattttatttagcacactattgatatgt 7886670  T
Q  229 tatatttcatctctct 244  Q
    ||||||||| ||||||    
T  7886669 tatatttcacctctct 7886654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 13308745 - 13308828
Alignment:
Q  94 acttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggt 177  Q
    |||||||||||| |||||| |||||  ||||||| |||||| |||||||||||||||||||| |||||||||||  ||||||||    
T  13308745 acttgatgatatgttacaccgagcgagagatattcaagtcacttgatgatgttgatattattcgaacattcaccataaagaggt 13308828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 34317625 - 34317482
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| |||    ||||||| |||||| || |||||||||||||| ||       ||||||||||||||| |||    
T  34317625 tgtggttcaatgacttgatgatatgttacaccgagtaagagatattcaagtcacttcatgatgttgatattgttc------tcaccgcaaagaggtctca 34317532  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttat 231  Q
      ||| |||||||||||||||||||| |||||||  |||||| |||||||    
T  34317531 aaaagagcatttacctcctaattttaattagcacactattggcaggttat 34317482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 18426072 - 18425992
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatt 209  Q
    |||||| ||||| |||||||||||||| |||||||||||| |||||||| |||  || |  ||||||||||||||||||||    
T  18426072 aagtcacttgataatgttgatattattcgaacattcaccgtaaagaggtctcaaaaatgttatttacctcctaattttatt 18425992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 31392485 - 31392550
Alignment:
Q  150 attatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcac 215  Q
    |||||| ||||||| ||| ||||||||| ||   ||||||||||||||| ||||||||||||||||    
T  31392485 attattcgaacatttacctcaaagaggtctcgaaaagggcatttacctcttaattttatttagcac 31392550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 1954952 - 1955008
Alignment:
Q  188 gcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||| | |||||||||||||||||| |||||  || |||||||||||||||||    
T  1954952 gcatttactttctaattttatttagcacgttattgacagattatatttcatctctct 1955008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 13309708 - 13309768
Alignment:
Q  184 aagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||||||||| |||| |||||||||||  |||||  || |||||||||||||||||    
T  13309708 aagggcatttacctcataatattatttagcacactattgacagattatatttcatctctct 13309768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 31944633 - 31944795
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| ||| |  ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| ||     
T  31944633 tgtggttcaatgacttgatgatatgttacaccgagtgtgagatattcaagtcacttgatgatgttgatattattcgaacattcaccgcaaagaggtctcg 31944732  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||||||||||||||||||||||||| ||  |||||  | ||||| ||||||||||||    
T  31944733 gaaagggcatttacctcctaattttatttagtacactattgacaagttatgtttcatctctct 31944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 3074418 - 3074546
Alignment:
Q  114 gagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagc 213  Q
    |||||| ||||| | |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  3074418 gagcgggagataatcaagtcacttgatgatgttgatattatttgaacattcatcgcaaagaggtctcaggaagggcatttatctcctaattttatttagc 3074517  T
Q  214 acgatattggtaggttatatttcatctct 242  Q
    ||  |||||| | ||||| ||||||||||    
T  3074518 acactattggcaagttatgtttcatctct 3074546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 12211384 - 12211222
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| || | | ||||||| ||||||||||||||||||||||||||| |||||||||   ||| ||||| ||     
T  12211384 tgtggttcaatgacttgatgatatgttacaccgaacaggagatattcaagtcatttgatgatgttgatattattcgaacattcatttcaatgaggtctcg 12211285  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
      || | |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12211284 aaaatgacatttacctcctaattttatttagcacactattggtaggttatatttcatctctct 12211222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 53693192 - 53693030
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||  |||||| ||||| | ||| || |||||||||||||||||||| ||||||||| ||||||||||| ||     
T  53693192 tgtggttcaatgacttgatgatatgttacatcgagcgggagataatcaaggcacttgatgatgttgatattattcgaacattcatcgcaaagaggtctcg 53693093  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||||| ||||| |||||| |||||||||  |||||| | ||||| ||||||||||||    
T  53693092 gaaagggcattcacctcttaatttcatttagcacactattggcaagttatgtttcatctctct 53693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 240
Target Start/End: Complemental strand, 55464818 - 55464660
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| |||||| ||| | | |||||| |||||||||||||||||||| ||||||||||   ||||||| | |     
T  55464818 tgtggttgaatgacttgatgatatgttacaccgagcgggagaaaatcaagtcacttgatgatgttgatattattcgaacattcactcgaaagaggctacg 55464719  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
      || ||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  55464718 aaaaaggcatctacctcctaattttatttagcacgtaattggcaggttatatttcatct 55464660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 241
Target Start/End: Original strand, 42843724 - 42843886
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaa---gaggtt 178  Q
    |||||||| |||| |||||||||| ||| | |||| |  ||||||| |||||| |||||||||||||||||| | ||||||||||| ||||   |||||     
T  42843724 tgtggtttaatgagttgatgatatgttatattgagtgagagatattcaagtcacttgatgatgttgatattaatcgaacattcaccacaaagaggaggtc 42843823  T
Q  179 tcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctc 241  Q
    || || |||||||| || |||||||||||||||||||| |||||||  |||||||||||||||    
T  42843824 tcggggagggcattgacatcctaattttatttagcacgttattggtgagttatatttcatctc 42843886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 8898037 - 8897922
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggt 228  Q
    |||||| | |||||||||||||||||| || |||||||||||||||||| |||| |||   |||||||||||||||||||||||||   ||||||||| |    
T  8898037 aagtcactggatgatgttgatattattcgagcattcaccgcaaagaggtctcagaaagactatttacctcctaattttatttagcaaactattggtagtt 8897938  T
Q  229 tatatttcatctctct 244  Q
    ||||||||||||||||    
T  8897937 tatatttcatctctct 8897922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 4325429 - 4325590
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| ||| || ||||| | ||  || ||||||||||||||||||||||||||||||| ||| | | || |||    
T  4325429 tgtggttcaatgacttgatgatatgttacaccgagtgggagataatcaacccacttgatgatgttgatattatttgaacattcacagcaga-atgtctca 4325527  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | ||||||| ||||||||||||||||||||||||  |||||  ||||||| || |||||||||    
T  4325528 gaaagggcaattacctcctaattttatttagcacactattgacaggttatgttgcatctctct 4325590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 27364900 - 27365013
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| |||||| ||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||| ||     
T  27364900 tgtggttaaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcgaacattcaccgaaaagaggtctcg 27364999  T
Q  182 ggaagggcatttac 195  Q
      ||||||||||||    
T  27365000 aaaagggcatttac 27365013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 10632757 - 10632640
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacatt--caccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtag 226  Q
    |||||| ||||||||||| || ||||| |||||||  ||||||||||| || || | ||   |||||||||||||||||||||| ||||  |||||||||    
T  10632757 aagtcacttgatgatgttaatgttattcgaacattttcaccgcaaagaagtctcggaaatatcatttacctcctaattttattttgcacactattggtag 10632658  T
Q  227 gttatatttcatctctct 244  Q
     |||||||||||||||||    
T  10632657 cttatatttcatctctct 10632640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 25182935 - 25182875
Alignment:
Q  184 aagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||| |||||||| |||||||||||||||||  ||||| |||||||||||||||||||||    
T  25182935 aagggtatttaccttctaattttatttagcacactattgataggttatatttcatctctct 25182875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 43137153 - 43137305
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||||| |||||| ||||||| |||||| |||||||||||||||||||| |||||||| |||| ||||||| |||| || || |    
T  43137153 atgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcgaacattcgccgc-aagaggtctcagaaaaggta 43137251  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||||||||||||||||||||  |||||| || ||||||||||| |||||    
T  43137252 tttacctcctaattttatttagcacactattggcagattatatttcatatctct 43137305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 240
Target Start/End: Original strand, 31989046 - 31989204
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| |||||| |||||| ||||||| |||||| |||||||||||||||||||| ||||||||||   ||||||||  |     
T  31989046 tgtggttgaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcgaacattcactcgaaagaggtcgcg 31989145  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
    | |||||||||||||||||||||||||||||||||  |||   ||||||||||||||||    
T  31989146 gaaagggcatttacctcctaattttatttagcacgccattaacaggttatatttcatct 31989204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 37382027 - 37381865
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  |||||| ||||||||||||||||||||   ||||||| |||||||||||||||||| |||||||| |||||||||| |||||||||| ||     
T  37382027 tgtggttaaatgactcgatgatatattacactgagcatgagatattcaagtcatttgatgatgtttatattattcgaacattcactgcaaagaggtctcg 37381928  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    | || | ||||| ||||||||||||||| |||||| |||||  |||||||||||||| |||||    
T  37381927 gaaatgacatttgcctcctaattttattcagcacgctattgacaggttatatttcatatctct 37381865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 240
Target Start/End: Original strand, 53710424 - 53710573
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||| | |||||| |||||| ||||||| |||||| |||||||||||||||||||| ||||||||||   ||||||||  | | |||||||    
T  53710424 atgacttgatgatctgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcgaacattcactcgaaagaggtcacggaaagggca 53710523  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
    |||||||||||||||||||||||||| |||||  ||||||||||| ||||    
T  53710524 tttacctcctaattttatttagcacgctattgacaggttatattttatct 53710573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 3857034 - 3856874
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  |||||||||||| || |||| | ||| || ||||||| |||||||||||||||||||||||||||  |||||||||||||||||||| |||    
T  3857034 tgtggttaaatgacttgatgacatgttactcagagtgggagatattcaagtcatttgatgatgttgatattattcaaacattcaccgcaaagaggtctca 3856935  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatctct 242  Q
    | |||   ||||||||||||||||||||||||||  |||||| | || || ||||||||||    
T  3856934 gaaagaaaatttacctcctaattttatttagcacattattggcatgtaatgtttcatctct 3856874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 244
Target Start/End: Complemental strand, 24988921 - 24988809
Alignment:
Q  132 tcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttat 231  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || | |||||||| || ||||||||||||||||||||  |||||  || ||||    
T  24988921 tcatttgatgatgttgatattattcgaacattcaccgcaaagaggtctcggaaagggcatgtatctcctaattttatttagcacactattgccagattat 24988822  T
Q  232 atttcatctctct 244  Q
     ||||||||||||    
T  24988821 gtttcatctctct 24988809  T

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Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 51262005 - 51262129
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    |||| |||||||||| ||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||| || |||||||| |    |||  ||    
T  51262005 atgaattgatgatatgttacactaagcggaagatattcaagtcacttgatgatgttgatattattcgaacattcatcgtaaagaggtcttgaaaagaaca 51262104  T
Q  191 tttacctcctaattttatttagcac 215  Q
    |||||||||||||||||||||||||    
T  51262105 tttacctcctaattttatttagcac 51262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 240
Target Start/End: Complemental strand, 24908551 - 24908393
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||| ||||||  ||| | ||||||| |||||  |||| ||||||||||||||| ||||||||||   ||||||||  |     
T  24908551 tgtggttgaatgacttgatgatatgttacaccaagcaggagatattcaagtcgcttgaagatgttgatattattcgaacattcactcgaaagaggtcgcg 24908452  T
Q  182 ggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
    | ||||| ||||||||||||||||||||||||||| ||||   ||||||||||||||||    
T  24908451 gaaagggtatttacctcctaattttatttagcacgctattcacaggttatatttcatct 24908393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 15668002 - 15668111
Alignment:
Q  94 acttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcattt 193  Q
    |||||||||||| ||| || |||||| ||||||| |||||| |||||||||||||||||||| |||||| |||  ||||||||| || | || |||||||    
T  15668002 acttgatgatatgttataccgagcgggagatattcaagtcacttgatgatgttgatattattcgaacatgcacaacaaagaggtatcggaaaaggcattt 15668101  T
Q  194 acctcctaat 203  Q
    ||||||||||    
T  15668102 acctcctaat 15668111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 22934910 - 22934797
Alignment:
Q  129 aagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggt 228  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||| || | |||| |||||||||| ||||||| ||||  ||  ||||| ||  |    
T  22934910 aagtcacttgatgatgttgatattattagaacattcaccgcaaagaggtctcggaaaggtcatttacctcttaattttgtttaagacactattgatatat 22934811  T
Q  229 tatatttcatctct 242  Q
    ||||||||||||||    
T  22934810 tatatttcatctct 22934797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 51408665 - 51408609
Alignment:
Q  184 aagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
    ||||||||||||||||||||||||||||||||| |||||  | ||||||||||||||    
T  51408665 aagggcatttacctcctaattttatttagcacgctattgacatgttatatttcatct 51408609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 9743393 - 9743447
Alignment:
Q  190 atttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    ||||||||| ||||||||||||||||  |||||||||||||| ||||||||||||    
T  9743393 atttacctcgtaattttatttagcacactattggtaggttatgtttcatctctct 9743447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 43585933 - 43585988
Alignment:
Q  189 catttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||||||||||||||||||||||| ||||   |||||||||||  |||||||    
T  43585933 catttacctcctaattttatttagcacgctattatcaggttatatttattctctct 43585988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 43585843 - 43585907
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatt 155  Q
    ||||||||||||||| |||||| |||||| ||||||  |||| | |||| |||||| ||||||||    
T  43585843 atgacttgatgatatgttacaccgagcgggagatatccaagttacttgacgatgttaatattatt 43585907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 244
Target Start/End: Original strand, 259944 - 260097
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    ||||||||||||||| |||||  |||||| | ||||| |||||| |||||||  ||||||||||| ||||||||||||||||||||| || | || ||||    
T  259944 atgacttgatgatatgttacatcgagcgggatatattcaagtcacttgatgacattgatattattcgaacattcaccgcaaagaggtctcggaaatggca 260043  T
Q  191 tttacctcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||| ||||||||||||||||||| |||||  || |||||||||||||||||    
T  260044 tttaccacctaattttatttagcacgctattgacagattatatttcatctctct 260097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 240
Target Start/End: Complemental strand, 214320 - 214161
Alignment:
Q  81 atgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttc 180  Q
    ||||||||  ||||||||||||||| |||||| |||| | |||||||  ||||| |||||||||||||||||||| ||||||| ||   ||||||||  |    
T  214320 atgtggttgaatgacttgatgatatgttacaccgagcaggagatattcgagtcacttgatgatgttgatattattcgaacattaactcaaaagaggtcgc 214221  T
Q  181 aggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
     | ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  214220 ggaaagggaatttacctcctaattttatttagcacgctattggcaggttatatttcatct 214161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 17757 - 17890
Alignment:
Q  82 tgtggttttatgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttca 181  Q
    |||||||  ||||||||||||||  |||||  |||||| |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||     
T  17757 tgtggttcaatgacttgatgatacgttacatcgagcgggagatatttaagtcacttgctgatgttgatattattcgaacattcaccgcaaagaggtctcc 17856  T
Q  182 ggaagggcatttacctcctaattttatttagcac 215  Q
    | |||| |||||| ||||||||||||||||||||    
T  17857 gaaaggacatttaactcctaattttatttagcac 17890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0726 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0726
Description:

Target: scaffold0726; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 132 - 244
Target Start/End: Original strand, 950 - 1062
Alignment:
Q  132 tcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttat 231  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||||  |||||  || ||||    
T  950 tcatttgatgatgttgatattattcgaacattcaccgcaaagaggtctccgaaagggcatttatctcctaattttatttagcacactattgccagattat 1049  T
Q  232 atttcatctctct 244  Q
     ||||||||||||    
T  1050 gtttcatctctct 1062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 15840 - 15970
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    |||| |||||||||| |||||| |||||| ||||||| || ||| |||||||  ||||||||||| ||||||||||||||||||  | || | |||||||    
T  15840 atgatttgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattcgaacattcaccgcaaagaaatctcggaaagggca 15939  T
Q  191 tttacctcctaattttatttagcacgatatt 221  Q
    |||||||||||||||||| ||||||| ||||    
T  15940 tttacctcctaattttatctagcacgctatt 15970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 244
Target Start/End: Complemental strand, 435491 - 435344
Alignment:
Q  99 atgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaac--attcaccgcaaagaggtttcaggaagggcatttacc 196  Q
    ||||||| |||||| |||||||||||||| |||||| ||||| |||||||||||||| ||||  ||| ||||| ||||||| ||   |||| ||||||||    
T  435491 atgatatgttacaccgagcggaagatattcaagtcacttgattatgttgatattattagaacatattaaccgcgaagaggtctcgaaaaggacatttacc 435392  T
Q  197 tcctaattttatttagcacgatattggtaggttatatttcatctctct 244  Q
    |||||||||||||||||||  |||||  || ||||||||||| |||||    
T  435391 tcctaattttatttagcacactattgtcagattatatttcatatctct 435344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 1430 - 1545
Alignment:
Q  99 atgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggcatttacctc 198  Q
    ||||||| |||||| |||||| ||||||| || ||| |||||||||||||||||||| |||||||||  |||||||||| || | || ||||||| ||||    
T  1430 atgatatgttacaccgagcgggagatattcaaatcacttgatgatgttgatattattcgaacattcattgcaaagaggtctcggaaatggcatttgcctc 1529  T
Q  199 ctaattttatttagca 214  Q
    ||||||||||||||||    
T  1530 ctaattttatttagca 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 197131 - 197261
Alignment:
Q  91 atgacttgatgatatattacactgagcggaagatatttaagtcatttgatgatgttgatattatttgaacattcaccgcaaagaggtttcaggaagggca 190  Q
    |||| |||||||||| |||||| |||||| ||||||| || ||| |||||||  |||||||||||  |||||||||||||||||  | ||   |||||||    
T  197131 atgaattgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattcaaacattcaccgcaaagaaatctcgaaaagggca 197230  T
Q  191 tttacctcctaattttatttagcacgatatt 221  Q
    |||||||||||||||||| ||||||| ||||    
T  197231 tttacctcctaattttatctagcacgctatt 197261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 9161 - 9251
Alignment:
Q  150 attatttgaacattcaccgcaaagaggtttcaggaagggcatttacctcctaattttatttagcacgatattggtaggttatatttcatct 240  Q
    |||||| ||||||||||   ||||||||   || |||| |||||||||||||||||||||||| | | | ||  |||||||||||||||||    
T  9161 attattcgaacattcactcgaaagaggtcgtagaaaggacatttacctcctaattttatttaggatgctttttttaggttatatttcatct 9251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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