View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9771_low_89 (Length: 219)
Name: NF9771_low_89
Description: NF9771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9771_low_89 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 7908821 - 7909020
Alignment:
| Q |
1 |
tagaaagaaaaagattatagaaaatataagcatttctaaccagtgcaagtttcttataagcattccttagctctgaatcagagcattccttattcaatcc |
100 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7908821 |
tagaaagaaaaagattatagaaagtataagcatttctaaccagtgcaagtttcttataagcattccttagctctgaatcagagcattccttattcaatcc |
7908920 |
T |
|
| Q |
101 |
caaaactgcatagaaatcattgcttttgtttccttcgttagccatattatttccaacaagaacaatccaaattttcacaaccaactagatcaaccaacca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7908921 |
caaaactgcatagaaatcattgcttttgtttccttcgttagccatattatttccaacaagaacaatccaaattttcacaaccaactagatcaaccaacca |
7909020 |
T |
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