View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9772_high_68 (Length: 216)
Name: NF9772_high_68
Description: NF9772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9772_high_68 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 27 - 197
Target Start/End: Original strand, 20488052 - 20488222
Alignment:
| Q |
27 |
cttatatttttgttattaatcttatacaaaaattgagtcagtttaaatgagtaatgacactgttttattcttgtttttacatcacagcatttggtgaatt |
126 |
Q |
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| T |
20488052 |
cttatatttttgttattaatcttatacaaaaattgagtcagtttaaatgagtaatgacactgttttattcttgtttttacatcacagcatttggtgaatt |
20488151 |
T |
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| Q |
127 |
ctgccattctgattctgattgtccaaagttgtgtcatcctcctaagaatgttactaactgcttctggaatc |
197 |
Q |
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| T |
20488152 |
ctgccattctgattctgattgtccaaagttgtgtcatcctcctaagaatgttactaactgcttctggaatc |
20488222 |
T |
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