View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9772_low_42 (Length: 316)
Name: NF9772_low_42
Description: NF9772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9772_low_42 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 82 - 292
Target Start/End: Original strand, 47296847 - 47297057
Alignment:
| Q |
82 |
atggcgcttgaaggacagaaggaataaagcatgaaggagtggaggaagaacgtgacttgcaaggttgaagagtagtaagagttaatctgcaaaacattaa |
181 |
Q |
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| T |
47296847 |
atggcgcttgaaggacagaaggaataaagcatgaaggagtggaggaagaacgtgacttgcaaggttgaagagtagtaagagttaatctgcaaaacattaa |
47296946 |
T |
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| Q |
182 |
ttgttaaacgcgttagatcaaattttgttacaaaaaggaaaacaatgcctatgcctaacttaatgcctaagcacctattttccaactcgttttgattaat |
281 |
Q |
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| T |
47296947 |
ttgttaaacgcgttagatcaaattttgttacaaaaaggaaaacaatgcctatgcctaacttaatgcctaagcacctattttccaactcgttttgattaat |
47297046 |
T |
|
| Q |
282 |
attcctggatc |
292 |
Q |
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| T |
47297047 |
attcctggatc |
47297057 |
T |
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