View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9772_low_5 (Length: 483)

Name: NF9772_low_5
Description: NF9772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9772_low_5
NF9772_low_5
[»] chr6 (46 HSPs)
chr6 (18-369)||(13612141-13612507)
chr6 (273-371)||(18820954-18821052)
chr6 (259-371)||(20555956-20556068)
chr6 (273-371)||(29808002-29808100)
chr6 (273-365)||(18457613-18457705)
chr6 (273-355)||(27572060-27572142)
chr6 (258-359)||(9097585-9097686)
chr6 (295-359)||(23022264-23022328)
chr6 (272-371)||(30675961-30676060)
chr6 (237-359)||(19003473-19003595)
chr6 (273-371)||(28495593-28495690)
chr6 (273-371)||(17286920-17287018)
chr6 (237-311)||(19005934-19006008)
chr6 (243-297)||(19363365-19363419)
chr6 (256-297)||(20224878-20224919)
chr6 (256-297)||(22118862-22118903)
chr6 (258-355)||(23664992-23665089)
chr6 (239-294)||(14978542-14978597)
chr6 (197-228)||(18697372-18697403)
chr6 (197-228)||(18707123-18707154)
chr6 (243-294)||(23527299-23527350)
chr6 (239-294)||(25618899-25618954)
chr6 (243-294)||(33443964-33444015)
chr6 (441-471)||(1599233-1599263)
chr6 (441-471)||(13612578-13612608)
chr6 (325-359)||(21703213-21703247)
chr6 (441-471)||(30675860-30675890)
chr6 (441-470)||(1539948-1539977)
chr6 (441-470)||(2290214-2290243)
chr6 (441-470)||(4290213-4290242)
chr6 (441-470)||(8056126-8056155)
chr6 (441-470)||(8226560-8226589)
chr6 (441-470)||(12743416-12743445)
chr6 (441-470)||(18333629-18333658)
chr6 (442-471)||(19009239-19009268)
chr6 (243-296)||(19024297-19024350)
chr6 (441-470)||(19174456-19174485)
chr6 (257-366)||(19858063-19858172)
chr6 (326-371)||(20594705-20594750)
chr6 (441-470)||(26923482-26923511)
chr6 (441-470)||(31184807-31184836)
chr6 (441-470)||(33862893-33862922)
chr6 (441-470)||(33865374-33865403)
chr6 (254-294)||(18895485-18895525)
chr6 (273-352)||(19653093-19653173)
chr6 (442-470)||(20104623-20104651)
[»] chr5 (30 HSPs)
chr5 (18-293)||(14048750-14049040)
chr5 (18-293)||(41094818-41095099)
chr5 (239-371)||(22413083-22413215)
chr5 (258-352)||(26011177-26011271)
chr5 (273-371)||(29917027-29917125)
chr5 (258-359)||(20026006-20026107)
chr5 (237-359)||(2153886-2154008)
chr5 (243-297)||(26739793-26739847)
chr5 (266-371)||(20901248-20901353)
chr5 (263-359)||(21328657-21328752)
chr5 (265-358)||(21740680-21740773)
chr5 (273-359)||(22958695-22958781)
chr5 (243-293)||(27988105-27988155)
chr5 (243-288)||(26731989-26732034)
chr5 (243-366)||(18318111-18318234)
chr5 (273-359)||(9078851-9078938)
chr5 (257-371)||(23065428-23065543)
chr5 (243-297)||(21327419-21327473)
chr5 (243-293)||(36315446-36315496)
chr5 (441-470)||(263806-263835)
chr5 (258-351)||(5888332-5888425)
chr5 (237-294)||(15797337-15797394)
chr5 (441-470)||(20910111-20910140)
chr5 (441-470)||(29347077-29347106)
chr5 (441-470)||(29349550-29349579)
chr5 (441-470)||(29352023-29352052)
chr5 (442-471)||(31062442-31062471)
chr5 (441-470)||(38620533-38620562)
chr5 (441-470)||(39364480-39364509)
chr5 (441-470)||(42244398-42244427)
[»] chr7 (39 HSPs)
chr7 (273-359)||(22073816-22073902)
chr7 (273-371)||(17061105-17061203)
chr7 (258-359)||(12254929-12255030)
chr7 (275-359)||(12755882-12755966)
chr7 (273-359)||(44015074-44015160)
chr7 (273-371)||(44117382-44117480)
chr7 (265-359)||(47832699-47832794)
chr7 (258-371)||(9388840-9388953)
chr7 (266-359)||(17180463-17180556)
chr7 (257-359)||(15007582-15007685)
chr7 (273-359)||(18006541-18006627)
chr7 (239-294)||(9176834-9176889)
chr7 (246-297)||(11524795-11524846)
chr7 (243-294)||(14037119-14037170)
chr7 (243-294)||(14347149-14347200)
chr7 (243-297)||(11768086-11768140)
chr7 (328-366)||(11973233-11973271)
chr7 (329-371)||(13870331-13870373)
chr7 (243-297)||(17016593-17016647)
chr7 (325-359)||(35152482-35152516)
chr7 (273-359)||(37726775-37726861)
chr7 (441-470)||(457420-457449)
chr7 (237-294)||(1867232-1867289)
chr7 (326-371)||(9512284-9512329)
chr7 (441-470)||(11392339-11392368)
chr7 (441-470)||(14948156-14948185)
chr7 (441-474)||(15081021-15081054)
chr7 (441-470)||(15375750-15375779)
chr7 (441-470)||(16233620-16233649)
chr7 (441-470)||(16411157-16411186)
chr7 (441-470)||(20384160-20384189)
chr7 (441-470)||(24703320-24703349)
chr7 (441-470)||(24705767-24705796)
chr7 (441-470)||(26355016-26355045)
chr7 (441-470)||(26357468-26357497)
chr7 (441-470)||(27217958-27217987)
chr7 (441-470)||(41524016-41524045)
chr7 (441-470)||(41526478-41526507)
chr7 (441-474)||(44015246-44015279)
[»] scaffold0163 (1 HSPs)
scaffold0163 (237-359)||(26346-26469)
[»] chr2 (34 HSPs)
chr2 (239-371)||(22172901-22173033)
chr2 (258-359)||(7680180-7680281)
chr2 (243-297)||(26393324-26393378)
chr2 (237-314)||(24528846-24528923)
chr2 (258-359)||(25176726-25176827)
chr2 (273-314)||(32451110-32451151)
chr2 (243-298)||(27845559-27845614)
chr2 (239-294)||(7187422-7187477)
chr2 (328-371)||(24941687-24941730)
chr2 (243-294)||(25109790-25109841)
chr2 (243-297)||(18546139-18546193)
chr2 (258-359)||(18785944-18786045)
chr2 (243-293)||(19672770-19672820)
chr2 (441-471)||(21153962-21153992)
chr2 (441-471)||(24368818-24368848)
chr2 (441-471)||(25616779-25616809)
chr2 (441-470)||(572495-572524)
chr2 (441-470)||(18810040-18810069)
chr2 (326-359)||(23067735-23067768)
chr2 (441-470)||(23131959-23131988)
chr2 (441-470)||(23134426-23134455)
chr2 (441-470)||(23136664-23136693)
chr2 (326-371)||(23653533-23653578)
chr2 (441-470)||(23711050-23711079)
chr2 (441-470)||(24897238-24897267)
chr2 (441-470)||(24899721-24899750)
chr2 (441-470)||(24902198-24902227)
chr2 (441-470)||(24904675-24904704)
chr2 (441-470)||(24907150-24907179)
chr2 (441-470)||(26506473-26506502)
chr2 (441-470)||(27919803-27919832)
chr2 (441-470)||(32038534-32038563)
chr2 (441-470)||(34401559-34401588)
chr2 (441-470)||(39683413-39683442)
[»] chr3 (45 HSPs)
chr3 (265-359)||(52522863-52522957)
chr3 (258-359)||(2044790-2044891)
chr3 (258-359)||(2047519-2047620)
chr3 (239-314)||(50243809-50243884)
chr3 (273-356)||(12171283-12171366)
chr3 (273-371)||(53069823-53069921)
chr3 (243-366)||(36167551-36167674)
chr3 (237-311)||(53300807-53300881)
chr3 (265-359)||(1464567-1464661)
chr3 (237-366)||(8500305-8500436)
chr3 (272-371)||(29171775-29171874)
chr3 (243-293)||(32402182-32402232)
chr3 (257-359)||(37250251-37250353)
chr3 (243-359)||(17738182-17738298)
chr3 (243-359)||(19039502-19039618)
chr3 (243-359)||(23275566-23275682)
chr3 (256-297)||(23317933-23317974)
chr3 (243-294)||(13919770-13919821)
chr3 (237-371)||(22109400-22109537)
chr3 (244-314)||(26054413-26054484)
chr3 (256-294)||(320172-320210)
chr3 (441-471)||(6468147-6468177)
chr3 (328-370)||(14973830-14973872)
chr3 (243-297)||(15207837-15207891)
chr3 (441-471)||(16281898-16281928)
chr3 (273-311)||(17247470-17247508)
chr3 (441-471)||(29171676-29171706)
chr3 (441-471)||(36167734-36167764)
chr3 (441-470)||(7780390-7780419)
chr3 (441-470)||(8500511-8500540)
chr3 (441-470)||(9117270-9117299)
chr3 (441-470)||(10246759-10246788)
chr3 (441-470)||(13150825-13150854)
chr3 (441-470)||(13153293-13153322)
chr3 (441-470)||(16453311-16453340)
chr3 (441-470)||(17464274-17464303)
chr3 (441-470)||(21619600-21619629)
chr3 (442-471)||(24339763-24339792)
chr3 (441-470)||(27166243-27166272)
chr3 (441-470)||(28847655-28847684)
chr3 (441-470)||(34160422-34160451)
chr3 (273-310)||(43843078-43843115)
chr3 (441-470)||(45605963-45605992)
chr3 (441-470)||(55477585-55477614)
chr3 (243-315)||(21619402-21619474)
[»] scaffold0034 (3 HSPs)
scaffold0034 (258-359)||(33378-33478)
scaffold0034 (273-359)||(51020-51106)
scaffold0034 (325-359)||(15808-15842)
[»] chr4 (29 HSPs)
chr4 (258-359)||(52242352-52242453)
chr4 (237-371)||(14969949-14970083)
chr4 (273-364)||(6191332-6191423)
chr4 (265-359)||(10957-11051)
chr4 (258-359)||(12287287-12287389)
chr4 (273-371)||(44103109-44103207)
chr4 (273-366)||(7799525-7799618)
chr4 (237-371)||(19617317-19617451)
chr4 (239-365)||(51462957-51463084)
chr4 (273-359)||(21817858-21817944)
chr4 (258-359)||(39705420-39705522)
chr4 (239-359)||(23802340-23802460)
chr4 (239-294)||(12611907-12611962)
chr4 (197-228)||(12841506-12841537)
chr4 (441-480)||(14969839-14969878)
chr4 (243-297)||(15792696-15792750)
chr4 (441-471)||(19617216-19617246)
chr4 (441-471)||(51462850-51462880)
chr4 (441-471)||(52313746-52313776)
chr4 (441-470)||(1836556-1836585)
chr4 (441-470)||(7640223-7640252)
chr4 (441-470)||(12032808-12032837)
chr4 (442-471)||(14281470-14281499)
chr4 (441-470)||(14717756-14717785)
chr4 (441-470)||(15117389-15117418)
chr4 (441-470)||(44616384-44616413)
chr4 (441-470)||(50221376-50221405)
chr4 (326-366)||(7089818-7089858)
chr4 (323-359)||(23651620-23651656)
[»] chr1 (42 HSPs)
chr1 (258-359)||(52927187-52927287)
chr1 (275-359)||(21857022-21857106)
chr1 (273-371)||(433906-434004)
chr1 (243-371)||(15859239-15859367)
chr1 (258-359)||(16759610-16759711)
chr1 (273-359)||(20249177-20249263)
chr1 (239-352)||(20453577-20453690)
chr1 (257-371)||(21841683-21841798)
chr1 (273-371)||(29777554-29777653)
chr1 (243-297)||(21683898-21683952)
chr1 (243-359)||(14294662-14294778)
chr1 (273-352)||(21746844-21746924)
chr1 (239-294)||(13880537-13880592)
chr1 (265-359)||(35980823-35980917)
chr1 (328-371)||(41230860-41230903)
chr1 (239-294)||(48521409-48521464)
chr1 (325-359)||(21616363-21616397)
chr1 (441-471)||(21708348-21708378)
chr1 (441-471)||(21712891-21712921)
chr1 (441-471)||(22129844-22129874)
chr1 (243-293)||(27652392-27652442)
chr1 (257-359)||(41049106-41049208)
chr1 (441-471)||(41230759-41230789)
chr1 (243-293)||(51131458-51131508)
chr1 (441-470)||(1573753-1573782)
chr1 (441-470)||(9044340-9044369)
chr1 (441-470)||(10827785-10827814)
chr1 (441-470)||(13989962-13989991)
chr1 (441-470)||(16363016-16363045)
chr1 (326-371)||(20136140-20136185)
chr1 (326-359)||(21027623-21027656)
chr1 (243-296)||(21342993-21343046)
chr1 (243-296)||(21347858-21347911)
chr1 (441-470)||(21474121-21474150)
chr1 (441-470)||(21922326-21922355)
chr1 (441-470)||(29777723-29777752)
chr1 (322-371)||(31613420-31613469)
chr1 (441-470)||(48444592-48444621)
chr1 (258-371)||(49262008-49262121)
chr1 (441-470)||(50799766-50799795)
chr1 (273-352)||(21754941-21755021)
chr1 (329-365)||(40129771-40129807)
[»] scaffold0555 (1 HSPs)
scaffold0555 (273-359)||(9703-9789)
[»] scaffold0243 (2 HSPs)
scaffold0243 (257-351)||(5266-5360)
scaffold0243 (441-474)||(5143-5176)
[»] chr8 (30 HSPs)
chr8 (237-371)||(1326367-1326501)
chr8 (243-371)||(19936162-19936290)
chr8 (258-359)||(20499522-20499623)
chr8 (257-365)||(45289689-45289797)
chr8 (273-359)||(18817546-18817632)
chr8 (258-335)||(21287105-21287182)
chr8 (265-359)||(982512-982607)
chr8 (273-371)||(15071382-15071481)
chr8 (273-371)||(23649450-23649548)
chr8 (273-359)||(19977344-19977430)
chr8 (273-359)||(19983992-19984078)
chr8 (273-359)||(21674555-21674641)
chr8 (243-293)||(28398490-28398540)
chr8 (325-359)||(32599555-32599589)
chr8 (329-371)||(32810573-32810615)
chr8 (441-470)||(1485498-1485527)
chr8 (441-470)||(4091619-4091648)
chr8 (441-470)||(4484376-4484405)
chr8 (441-470)||(4541406-4541435)
chr8 (441-470)||(5852329-5852358)
chr8 (442-471)||(13506973-13507002)
chr8 (441-470)||(14824873-14824902)
chr8 (441-470)||(18677098-18677127)
chr8 (441-470)||(20537001-20537030)
chr8 (441-470)||(22002852-22002881)
chr8 (243-292)||(22418588-22418637)
chr8 (254-311)||(22526422-22526479)
chr8 (441-470)||(33396848-33396877)
chr8 (442-470)||(15071552-15071580)
chr8 (323-371)||(28648197-28648245)
[»] scaffold0121 (1 HSPs)
scaffold0121 (247-371)||(7656-7780)
[»] scaffold0083 (1 HSPs)
scaffold0083 (239-366)||(42293-42420)
[»] scaffold0056 (1 HSPs)
scaffold0056 (273-371)||(78515-78613)
[»] scaffold0112 (1 HSPs)
scaffold0112 (239-314)||(23103-23178)
[»] scaffold0601 (1 HSPs)
scaffold0601 (243-301)||(7577-7635)
[»] scaffold0530 (1 HSPs)
scaffold0530 (257-359)||(164-266)
[»] scaffold0413 (1 HSPs)
scaffold0413 (273-371)||(14740-14838)
[»] scaffold0394 (1 HSPs)
scaffold0394 (239-365)||(13046-13172)
[»] scaffold0149 (1 HSPs)
scaffold0149 (237-371)||(34282-34416)
[»] scaffold0142 (1 HSPs)
scaffold0142 (273-359)||(17671-17757)
[»] scaffold0100 (1 HSPs)
scaffold0100 (273-359)||(23641-23727)
[»] scaffold0075 (1 HSPs)
scaffold0075 (265-359)||(50680-50774)
[»] scaffold0319 (1 HSPs)
scaffold0319 (266-371)||(6136-6241)
[»] scaffold0114 (2 HSPs)
scaffold0114 (243-359)||(46176-46292)
scaffold0114 (326-371)||(14599-14644)
[»] scaffold0012 (2 HSPs)
scaffold0012 (258-359)||(228354-228455)
scaffold0012 (442-470)||(136321-136349)
[»] scaffold0008 (1 HSPs)
scaffold0008 (258-371)||(13674-13787)
[»] scaffold0207 (1 HSPs)
scaffold0207 (273-359)||(1779-1865)
[»] scaffold0191 (1 HSPs)
scaffold0191 (237-371)||(3606-3739)
[»] scaffold0102 (1 HSPs)
scaffold0102 (273-359)||(20144-20230)
[»] scaffold0007 (1 HSPs)
scaffold0007 (258-359)||(17040-17142)
[»] scaffold0970 (1 HSPs)
scaffold0970 (258-359)||(1468-1568)
[»] scaffold0333 (2 HSPs)
scaffold0333 (263-359)||(7502-7598)
scaffold0333 (263-359)||(14882-14978)
[»] scaffold0162 (1 HSPs)
scaffold0162 (237-371)||(25396-25531)
[»] scaffold0363 (1 HSPs)
scaffold0363 (257-371)||(10158-10273)
[»] scaffold0535 (2 HSPs)
scaffold0535 (237-311)||(7570-7644)
scaffold0535 (441-471)||(7774-7804)
[»] scaffold0037 (1 HSPs)
scaffold0037 (273-359)||(79469-79555)
[»] scaffold0023 (2 HSPs)
scaffold0023 (273-359)||(39144-39230)
scaffold0023 (441-470)||(95507-95536)
[»] scaffold0022 (2 HSPs)
scaffold0022 (243-352)||(81192-81301)
scaffold0022 (284-335)||(64-115)
[»] scaffold0013 (1 HSPs)
scaffold0013 (257-365)||(31146-31254)
[»] scaffold2004 (1 HSPs)
scaffold2004 (263-346)||(1-84)
[»] scaffold0500 (1 HSPs)
scaffold0500 (197-236)||(8336-8375)
[»] scaffold0145 (1 HSPs)
scaffold0145 (328-371)||(8256-8299)
[»] scaffold0914 (1 HSPs)
scaffold0914 (243-297)||(2646-2700)
[»] scaffold0628 (1 HSPs)
scaffold0628 (273-311)||(2008-2046)
[»] scaffold0371 (1 HSPs)
scaffold0371 (325-359)||(16269-16303)
[»] scaffold0347 (1 HSPs)
scaffold0347 (243-297)||(9803-9857)
[»] scaffold0273 (1 HSPs)
scaffold0273 (257-359)||(8574-8676)
[»] scaffold0232 (1 HSPs)
scaffold0232 (325-359)||(1967-2001)
[»] scaffold0101 (1 HSPs)
scaffold0101 (441-471)||(302-332)
[»] scaffold0081 (1 HSPs)
scaffold0081 (256-294)||(4003-4041)
[»] scaffold0016 (1 HSPs)
scaffold0016 (441-471)||(185261-185291)
[»] scaffold0004 (2 HSPs)
scaffold0004 (243-293)||(333239-333289)
scaffold0004 (323-359)||(79142-79178)
[»] scaffold0876 (1 HSPs)
scaffold0876 (326-371)||(2203-2248)
[»] scaffold0621 (1 HSPs)
scaffold0621 (274-359)||(7438-7523)
[»] scaffold0521 (1 HSPs)
scaffold0521 (441-470)||(8714-8743)
[»] scaffold0481 (1 HSPs)
scaffold0481 (441-470)||(217-246)
[»] scaffold0444 (1 HSPs)
scaffold0444 (441-470)||(14490-14519)
[»] scaffold0395 (1 HSPs)
scaffold0395 (441-470)||(2273-2302)
[»] scaffold0305 (1 HSPs)
scaffold0305 (326-359)||(21355-21388)
[»] scaffold0297 (1 HSPs)
scaffold0297 (441-470)||(2741-2770)
[»] scaffold0292 (1 HSPs)
scaffold0292 (326-371)||(1295-1340)
[»] scaffold0254 (1 HSPs)
scaffold0254 (441-470)||(19369-19398)
[»] scaffold0247 (1 HSPs)
scaffold0247 (442-471)||(17067-17096)
[»] scaffold0230 (1 HSPs)
scaffold0230 (441-470)||(15047-15076)
[»] scaffold0228 (3 HSPs)
scaffold0228 (441-474)||(5549-5582)
scaffold0228 (441-474)||(13131-13164)
scaffold0228 (441-474)||(23083-23116)
[»] scaffold0211 (1 HSPs)
scaffold0211 (326-371)||(27932-27977)
[»] scaffold0193 (1 HSPs)
scaffold0193 (326-371)||(14152-14197)
[»] scaffold0174 (1 HSPs)
scaffold0174 (441-470)||(29089-29118)
[»] scaffold0151 (1 HSPs)
scaffold0151 (326-371)||(11097-11142)
[»] scaffold0150 (2 HSPs)
scaffold0150 (273-310)||(32916-32953)
scaffold0150 (442-470)||(30937-30965)
[»] scaffold0134 (1 HSPs)
scaffold0134 (441-470)||(38918-38947)
[»] scaffold0132 (1 HSPs)
scaffold0132 (442-471)||(29474-29503)
[»] scaffold0122 (2 HSPs)
scaffold0122 (326-371)||(32617-32662)
scaffold0122 (441-470)||(33659-33688)
[»] scaffold0044 (1 HSPs)
scaffold0044 (441-470)||(41495-41524)
[»] scaffold0031 (1 HSPs)
scaffold0031 (441-470)||(56046-56075)
[»] scaffold0029 (1 HSPs)
scaffold0029 (442-471)||(12386-12415)
[»] scaffold0028 (5 HSPs)
scaffold0028 (441-470)||(135306-135335)
scaffold0028 (441-470)||(137775-137804)
scaffold0028 (441-470)||(140244-140273)
scaffold0028 (441-470)||(142713-142742)
scaffold0028 (441-470)||(145182-145211)
[»] scaffold0231 (1 HSPs)
scaffold0231 (323-359)||(11354-11390)
[»] scaffold0063 (1 HSPs)
scaffold0063 (442-470)||(40870-40898)


Alignment Details
Target: chr6 (Bit Score: 269; Significance: 1e-150; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 18 - 369
Target Start/End: Original strand, 13612141 - 13612507
Alignment:
Q  18 acacagcaacagcacaagaactaatattcaataaatcggagccttcatcgatagacacattaactataatttaaacacggattcaacatgtcagaatcat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13612141 acacagcaacagcacaagaactaatattcaataaatcggagccatcatcgatagacacattaactataatttaaacacggattcaacatgtcagaatcat 13612240  T
Q  118 ggattcagagattataatatacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcacttttaacctaattctcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13612241 ggattcagagattataatatacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcacttttaacctaattctcc 13612340  T
Q  218 aattctcaaaaacaaaacc---------------acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaa 302  Q
    |||| |||||||| |||||               ||||||||||||||||||| |||| |||||||||||||||||| || |||||| ||||||||||||    
T  13612341 aattatcaaaaactaaacctacaacatgttaaatacaattatcagaattacagacttaggagaattgattgttagtcccacccttacattaacaatgaaa 13612440  T
Q  303 attgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcata 369  Q
    |||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  13612441 attgcagctctctaggtcactttctcttctcttggttttttctcccttttctccaaaattgatcata 13612507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 18821052 - 18820954
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| | ||||||||||||||||||||| |||||||||||    
T  18821052 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgcttctcccttctcttggctttttctcccttttctccaaaattgatcatacg 18820954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 20556068 - 20555956
Alignment:
Q  259 taagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaa 358  Q
    ||||| |||||| |||||||| || ||||||||||||||||||||| ||||||||| | ||   | || |||||||| | ||||||||||||||||||||    
T  20556068 taagaaaattgaatgttagtcccacccttaccttaacaatgaaaatcgcagctctctaggtgcttctcccttctcttgggtttttctcccttttctccaa 20555969  T
Q  359 agttgatcatacg 371  Q
    | |||||| ||||    
T  20555968 aattgatcgtacg 20555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 29808100 - 29808002
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| | ||||||||||||||||||||| |||||| ||||    
T  29808100 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgcttctcccttctcttggctttttctcccttttctccaaaattgatcgtacg 29808002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 365
Target Start/End: Original strand, 18457613 - 18457705
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgat 365  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| | ||||||||||||||||||||| |||||    
T  18457613 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgcttctcccttctcttggctttttctcccttttctccaaaattgat 18457705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 27572142 - 27572060
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctc 355  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||||| |||||||||||||||||    
T  27572142 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgtttctcccttctcttagctttttctcccttttctc 27572060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 9097686 - 9097585
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || |||||||| ||||||||||| ||| ||||| | |||| ||   ||| |||||||||||||| | |||||||||||||||||||    
T  9097686 ttaatagaattgaatgctagtctcacccttaccttaagaatcaaaatcgtagctttcttggtctctttctcttctcttggctttttctcccttttctcca 9097587  T
Q  358 aa 359  Q
    ||    
T  9097586 aa 9097585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 23022264 - 23022328
Alignment:
Q  295 caatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| |||| |||| | |||||||||||||||||| | |||||||||||||||||||||    
T  23022264 caatgaaaatcgcagttctctaggtcactttctcttctcttggatttttctcccttttctccaaa 23022328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 371
Target Start/End: Complemental strand, 30676060 - 30675961
Alignment:
Q  272 tgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    ||||||||||| ||||||||||||||||||||| |||||| || | ||   | || |||||||| | ||||||| ||||||||||||| |||||| ||||    
T  30676060 tgttagtctcacccttaccttaacaatgaaaatcgcagctttctaggttgttctcccttctcttggctttttctgccttttctccaaaattgatcgtacg 30675961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 359
Target Start/End: Original strand, 19003473 - 19003595
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctctta 336  Q
    |||||| ||||||| | || || ||||  ||||| ||||||| ||| ||||||||||||||||||||| |||||| || | ||     || ||||||||     
T  19003473 acaattttcagaatcatagactcaagattattgaatgttagtttcacccttaccttaacaatgaaaatcgcagctttctaggttgtcctcccttctcttg 19003572  T
Q  337 gttttttctcccttttctccaaa 359  Q
    |||||||||||||||||||||||    
T  19003573 gttttttctcccttttctccaaa 19003595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 28495690 - 28495593
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| |  |||||||||||||||||||| |||||| ||||    
T  28495690 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgcttctcccttctctt-ggcttttctcccttttctccaaaattgatcgtacg 28495593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 17287018 - 17286920
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||   |||||||| ||||| ||   | || ||| |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  17287018 gttagtctcacccttaccttatagatgaaaatcgcagccctaggtctctcttgctcttctcttggctttttctcccttttctccaaaattgatcgtacg 17286920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 19005934 - 19006008
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagct 311  Q
    |||||| ||||||| | || || ||||  ||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  19005934 acaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttaacaatgaaaatcgcagct 19006008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 19363365 - 19363419
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    |||||||| | |||||||||| |||||| ||||||||||| ||||||||||||||    
T  19363365 atcagaatcataggcttaagaaaattgaatgttagtctcacccttaccttaacaa 19363419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 20224878 - 20224919
Alignment:
Q  256 gcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  20224878 gcttaagagaattgaatgttagtctcacccttaccttaacaa 20224919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 22118862 - 22118903
Alignment:
Q  256 gcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  22118862 gcttaagagaattgaatgttagtctcacccttaccttaacaa 22118903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 23665089 - 23664992
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctc 355  Q
    |||| |||||||| || |||||||| ||||||||||  |   ||||| |||||||||   ||| |||||||||||||| | |||||||||||||||||    
T  23665089 ttaatagaattgaatgctagtctcacccttaccttagaatcaaaaatcgcagctctcttggtctctttctcttctcttggctttttctcccttttctc 23664992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 14978597 - 14978542
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    |||||||||||| ||||||||||||  ||||| |||||||| || |||||||||||    
T  14978597 aattatcagaatcacaggcttaagaagattgaatgttagtcccacccttaccttaa 14978542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 228
Target Start/End: Original strand, 18697372 - 18697403
Alignment:
Q  197 tcacttttaacctaattctccaattctcaaaa 228  Q
    ||||||||||||||||||||||||||||||||    
T  18697372 tcacttttaacctaattctccaattctcaaaa 18697403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 228
Target Start/End: Original strand, 18707123 - 18707154
Alignment:
Q  197 tcacttttaacctaattctccaattctcaaaa 228  Q
    ||||||||||||||||||||||||||||||||    
T  18707123 tcacttttaacctaattctccaattctcaaaa 18707154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 23527350 - 23527299
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    ||||||||||||||||||||| |||||| || ||||| || |||||||||||    
T  23527350 atcagaattacaggcttaagaaaattgaatgctagtcccacccttaccttaa 23527299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 25618954 - 25618899
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    |||||||||||| ||||||||||||  ||||| |||||||| || |||||||||||    
T  25618954 aattatcagaatcacaggcttaagaagattgaatgttagtcccacccttaccttaa 25618899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 33443964 - 33444015
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    ||||||||||   ||||||||||||||| ||||||||||| |||||||||||    
T  33443964 atcagaattatcagcttaagagaattgaatgttagtctcacccttaccttaa 33444015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 1599233 - 1599263
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  1599233 cccccaaaactctctaaaatctcataacaac 1599263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 13612578 - 13612608
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  13612578 cccccaaaactctctaaaatctcataacaac 13612608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 21703213 - 21703247
Alignment:
Q  325 tctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||||||| |||||||||||||||||||||    
T  21703213 tctcttctcttagctttttctcccttttctccaaa 21703247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 30675890 - 30675860
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  30675890 cccccaaaactctctaaaatctcataacaac 30675860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 1539977 - 1539948
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  1539977 cccccaaaactctctaaaatctcataacaa 1539948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 2290243 - 2290214
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  2290243 cccccaaaactctctaaaatctcataacaa 2290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 4290242 - 4290213
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  4290242 cccccaaaactctctaaaatctcataacaa 4290213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 8056126 - 8056155
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  8056126 cccccaaaactctctaaaatctcataacaa 8056155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 8226589 - 8226560
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  8226589 cccccaaaactctctaaaatctcataacaa 8226560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 12743416 - 12743445
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  12743416 cccccaaaactctctaaaatctcataacaa 12743445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 18333658 - 18333629
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  18333658 cccccaaaactctctaaaatctcataacaa 18333629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Original strand, 19009239 - 19009268
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaac 471  Q
    ||||||||||||||||||||||||||||||    
T  19009239 ccccaaaactctctaaaatctcataacaac 19009268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 19024297 - 19024350
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaaca 296  Q
    ||||||||||||| ||||| |||||||| ||  ||||||| |||||||||||||    
T  19024297 atcagaattacagacttaatagaattgaatgcaagtctcacccttaccttaaca 19024350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 19174456 - 19174485
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  19174456 cccccaaaactctctaaaatctcataacaa 19174485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 366
Target Start/End: Complemental strand, 19858172 - 19858063
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    |||||||  ||||| |||||||| || ||||||||||  | | |||||||| ||| || | |||  | || |||||||| | ||||||||||||||||||    
T  19858172 cttaagattattgaatgttagtcccacccttaccttataactcaaaattgccgctttctaggtctttctcccttctcttggctttttctcccttttctcc 19858073  T
Q  357 aaagttgatc 366  Q
    ||| ||||||    
T  19858072 aaaattgatc 19858063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Original strand, 20594705 - 20594750
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  20594705 ctcttctcttggctttttctcccttttctccaaaattgatcgtacg 20594750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 26923511 - 26923482
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  26923511 cccccaaaactctctaaaatctcataacaa 26923482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 31184807 - 31184836
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  31184807 cccccaaaactctctaaaatctcataacaa 31184836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 33862893 - 33862922
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  33862893 cccccaaaactctctaaaatctcataacaa 33862922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 33865374 - 33865403
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  33865374 cccccaaaactctctaaaatctcataacaa 33865403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 18895525 - 18895485
Alignment:
Q  254 aggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    |||||||||| |||||| ||||||||||| |||||||||||    
T  18895525 aggcttaagaaaattgaatgttagtctcacccttaccttaa 18895485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 19653093 - 19653173
Alignment:
Q  273 gttagtctcatccttaccttaacaa-tgaaaattgcagctctccatgtcactttctcttctcttagttttttctccctttt 352  Q
    |||||||||| ||||||||||  |  ||||||| | |||| || | |||||||||||||||||| | ||||||||||||||    
T  19653093 gttagtctcacccttaccttagaatgtgaaaatcgtagctttctaggtcactttctcttctcttggctttttctccctttt 19653173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 470
Target Start/End: Complemental strand, 20104651 - 20104623
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaa 470  Q
    |||||||||||||||||||||||||||||    
T  20104651 ccccaaaactctctaaaatctcataacaa 20104623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 293
Target Start/End: Original strand, 14048750 - 14049040
Alignment:
Q  18 acacagcaacagcacaagaactaatattcaataaatcggagccttcatcgatagacacattaactataatttaaacacggattcaacatgtcagaatcat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14048750 acacagcaacagcacaagaactaatattcaataaatcggagccatcatcgatagacacattaactataatttaaacacggattcaacatgtcagaatcat 14048849  T
Q  118 ggattcagagattataatatacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcacttttaacctaattctcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14048850 ggattcagagattataatatacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcacttttaacctaattctcc 14048949  T
Q  218 aattctcaaaaacaaaacc---------------acaattatcagaattacaggcttaagagaattgattgttagtctcatccttacctta 293  Q
    |||| |||||||| |||||               |||||||||||||||||||||||||||||||||||||||| || || ||||||||||    
T  14048950 aattttcaaaaactaaacctacaacatgttaaatacaattatcagaattacaggcttaagagaattgattgttaatcccacccttacctta 14049040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 18 - 293
Target Start/End: Complemental strand, 41095099 - 41094818
Alignment:
Q  18 acacagcaacagcacaagaactaatattcaataaatcggagccttcatcgatagacacattaactataatttaaacacggattcaacatgtcagaatcat 117  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||         |||||    
T  41095099 acacagcaacaacacaagaactaatattcaataaatcggagccatcatcgatagacacattaactataatttaaacacggattaaa---------atcat 41095009  T
Q  118 ggattcagagattataatatacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcacttttaacctaattctcc 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41095008 ggatttagagattataatatacacaaaatcatagtatcagattagagcatgaatttataaaaagattcaataaaaaccttcatttttaacctaattctcc 41094909  T
Q  218 aattctcaaaaacaaaacc---------------acaattatcagaattacaggcttaagagaattgattgttagtctcatccttacctta 293  Q
    ||||||||||||| |||||               |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41094908 aattctcaaaaactaaacctacaacatgttaaatacaattatcagaattacaggcttaagagaattgattgttagtctcacccttacctta 41094818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 371
Target Start/End: Original strand, 22413083 - 22413215
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagt 338  Q
    |||||||||||| | |||||||| |  ||||| |||||||| || ||||||||||||||||||||| ||||||||||| ||   | || |||||||| |     
T  22413083 aattatcagaatcataggcttaaaaagattgaatgttagtcccacccttaccttaacaatgaaaatcgcagctctccaggtgtttctcccttctcttggc 22413182  T
Q  339 tttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||||||||| |||| |||||| ||||    
T  22413183 tttttctcccttttcttcaaaattgatcgtacg 22413215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 26011271 - 26011177
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctccctttt 352  Q
    |||| |||||||| || |||||||| |||||||||| |||||||||| ||||||||| | |||||||||||||||||| | ||||||||| ||||    
T  26011271 ttaatagaattgaatgctagtctcacccttaccttagcaatgaaaatcgcagctctctaggtcactttctcttctcttggatttttctccatttt 26011177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 29917027 - 29917125
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||||||||||||||||||||||| | ||   | || |||||||||| |||| ||||||||||| |||| |||||| ||||    
T  29917027 gttagtctcacccttaccttaacaatgaaaattgcagctctctaagtgcttctcccttctcttagcttttactcccttttcttcaaaattgatcgtacg 29917125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 20026107 - 20026006
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || |||||||| |||||||||| |||||||||| ||||||||  | |||   |||||||||||| | |||||||||||||||||||    
T  20026107 ttaatagaattgaatgctagtctcacccttaccttagcaatgaaaatcgcagctctaaaggtcctcttctcttctcttggctttttctcccttttctcca 20026008  T
Q  358 aa 359  Q
    ||    
T  20026007 aa 20026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 359
Target Start/End: Complemental strand, 2154008 - 2153886
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctctta 336  Q
    |||||| ||||||| | || || ||||  ||||| |||||||| || ||||||||||||||||||||| ||||||||| | ||   | || ||||||||     
T  2154008 acaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaacaatgaaaatcgcagctctctaggtgtttctcccttctcttg 2153909  T
Q  337 gttttttctcccttttctccaaa 359  Q
    | |||||||||||||||||||||    
T  2153908 gctttttctcccttttctccaaa 2153886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 26739847 - 26739793
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  26739847 atcagaattacagacttaagagaattgaatgttagtctcacccttaccttaacaa 26739793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 371
Target Start/End: Complemental strand, 20901353 - 20901248
Alignment:
Q  266 attgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgat 365  Q
    ||||| |||||||| || ||||||||||||||||||||| |||||| || | ||   | || |||||||| | ||||||||||||||||||||| |||||    
T  20901353 attgaatgttagtcccacccttaccttaacaatgaaaatcgcagctttctaagttgttctcccttctcttggctttttctcccttttctccaaaattgat 20901254  T
Q  366 catacg 371  Q
    | ||||    
T  20901253 cgtacg 20901248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 359
Target Start/End: Complemental strand, 21328752 - 21328657
Alignment:
Q  263 agaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||| || |||||||| | |||||| | |||||||||| |||||| || | ||||||||||| |||||| | |||||||||||||||||||||    
T  21328752 agaattgaatgctagtctcacctttacctaagcaatgaaaatcgcagct-tctaggtcactttctcctctcttggctttttctcccttttctccaaa 21328657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 358
Target Start/End: Complemental strand, 21740773 - 21740680
Alignment:
Q  265 aattgattgttagtctcatccttaccttaacaatga-aaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaa 358  Q
    ||||||||| |||||||| ||||||||||  ||| | |||| ||||| ||||| |||||||||| |||||||   ||||||||||||||||||||    
T  21740773 aattgattgctagtctcacccttaccttag-aatcagaaatcgcagcactccaggtcactttctattctcttgtctttttctcccttttctccaa 21740680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 22958781 - 22958695
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| | ||   | || |||||||| | |||| ||||||||||||||||    
T  22958781 gttagtctcaaccttaccttaacaatgaaaatcgcagcactctaggtttttctcccttctcttggcttttcctcccttttctccaaa 22958695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 27988155 - 27988105
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta 293  Q
    ||||||||||||| ||||| |||||||| ||||||||||| ||||||||||    
T  27988155 atcagaattacagacttaatagaattgaatgttagtctcacccttacctta 27988105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 26732034 - 26731989
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatcctta 288  Q
    ||||||||||||| |||||||||||||| ||||||||||| |||||    
T  26732034 atcagaattacagacttaagagaattgaatgttagtctcaccctta 26731989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 366
Target Start/End: Complemental strand, 18318234 - 18318111
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcacttt-ctcttctcttagtttt 341  Q
    ||||||||||||| ||||| |  ||||| ||||||||||| ||||||||||  | | ||||| ||||| ||| | |||   || |||||||||| | |||    
T  18318234 atcagaattacagacttaataagattgaatgttagtctcacccttaccttataactcaaaatcgcagc-ctctaggtcttattgctcttctcttggcttt 18318136  T
Q  342 ttctcccttttctccaaagttgatc 366  Q
    |||||||||||||||||| ||||||    
T  18318135 ttctcccttttctccaaaattgatc 18318111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 9078851 - 9078938
Alignment:
Q  273 gttagtctcatccttacctta-acaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| |||||||||| |  |||||||| ||||| ||  || || ||| |||||||||| | |||||||||||||||||||||    
T  9078851 gttagtctcacccttaccttataggatgaaaatcgcagccctagatctctcttgctcttctcttggctttttctcccttttctccaaa 9078938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 371
Target Start/End: Original strand, 23065428 - 23065543
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctcc-atgtcactttctcttctcttagttttttctcccttttctc 355  Q
    |||||||  ||||| |||||||| || ||||||||||  | | ||||| |||||  ||| | ||| ||| || ||||||| |||||||||||||||||||    
T  23065428 cttaagattattgaatgttagtcccacccttaccttataactcaaaatcgcagcaatcctaggtctcttgcttttctcttggttttttctcccttttctc 23065527  T
Q  356 caaagttgatcatacg 371  Q
    |||| |||||| ||||    
T  23065528 caaaattgatcgtacg 23065543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 21327473 - 21327419
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    |||||||||| || ||||||| |||||| |||||||||||  |||||||||||||    
T  21327473 atcagaattatagacttaagaaaattgaatgttagtctcactcttaccttaacaa 21327419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 36315446 - 36315496
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta 293  Q
    ||||||||||||| ||||| |||||||| || |||||||| ||||||||||    
T  36315446 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 36315496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 263835 - 263806
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  263835 cccccaaaactctctaaaatctcataacaa 263806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 5888425 - 5888332
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttt 351  Q
    |||| |||||||| || |||||||| ||||||||||  |   ||||| |||||||||   ||| |||||||||||||| | |||||||||||||    
T  5888425 ttaatagaattgaatgctagtctcacccttaccttagaatcaaaaatcgcagctctcttggtctctttctcttctcttggctttttctcccttt 5888332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 15797337 - 15797394
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    |||| ||||||||||| |||||||||| |||||| || ||||| || |||||||||||    
T  15797337 acaactatcagaattagaggcttaagaaaattgagtgctagtcccacccttaccttaa 15797394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 20910111 - 20910140
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  20910111 cccccaaaactctctaaaatctcataacaa 20910140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 29347077 - 29347106
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  29347077 cccccaaaactctctaaaatctcataacaa 29347106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 29349550 - 29349579
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  29349550 cccccaaaactctctaaaatctcataacaa 29349579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 29352023 - 29352052
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  29352023 cccccaaaactctctaaaatctcataacaa 29352052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Original strand, 31062442 - 31062471
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaac 471  Q
    ||||||||||||||||||||||||||||||    
T  31062442 ccccaaaactctctaaaatctcataacaac 31062471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 38620533 - 38620562
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  38620533 cccccaaaactctctaaaatctcataacaa 38620562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 39364480 - 39364509
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  39364480 cccccaaaactctctaaaatctcataacaa 39364509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 42244427 - 42244398
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  42244427 cccccaaaactctctaaaatctcataacaa 42244398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 22073816 - 22073902
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||||||| |||||||||||||||||||||||    
T  22073816 gttagtctcacccttaccttaacaatgaaaatcgcagctccctatgtcactttctcttctcttggttttttctcccttttctccaaa 22073902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 17061203 - 17061105
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| | ||||||||||||||||||||| |||||| ||||    
T  17061203 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgcttctcccttctcttggctttttctcccttttctccaaaattgatcgtacg 17061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 12255030 - 12254929
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || |||||||| |||||||||| |||||||||| ||| |||||   ||| |||| ||||||||| | |||||||||||||||||||    
T  12255030 ttaatagaattgaatgctagtctcacccttaccttagcaatgaaaatcgcaactctcttggtctctttatcttctcttggctttttctcccttttctcca 12254931  T
Q  358 aa 359  Q
    ||    
T  12254930 aa 12254929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 359
Target Start/End: Complemental strand, 12755966 - 12755882
Alignment:
Q  275 tagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||| ||||||||||||||||||||| ||||||||| | ||   | ||||||||||| | |||||||||||||||||||||    
T  12755966 tagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgcttctctcttctcttggctttttctcccttttctccaaa 12755882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 44015074 - 44015160
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||| | | ||||| ||||| ||| | ||| ||| |||||||||| |||||||||||||||||||||||    
T  44015074 gttagtctcacccttaccttaatactcaaaatcgcagcactctaggtctcttgctcttctcttggttttttctcccttttctccaaa 44015160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 44117382 - 44117480
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| | |||||||||||||| |||||| |||||| ||||    
T  44117382 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgcttctcccttctcttggctttttctcccttttttccaaaattgatcgtacg 44117480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 359
Target Start/End: Original strand, 47832699 - 47832794
Alignment:
Q  265 aattgattgttagtctcatccttaccttaacaatgaaaattgcagctctcc-atgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||| ||||||||||| ||||||||||  | | ||||| |||||||| | | ||||||||||||||||||   |||||||||||||||||||||    
T  47832699 aattgaatgttagtctcacccttaccttagaattcaaaatcgcagctcttctaggtcactttctcttctcttgactttttctcccttttctccaaa 47832794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 371
Target Start/End: Complemental strand, 9388953 - 9388840
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || |||||||| ||||||||||| |||  |||| ||||||||| | |||    || |||||||| | |||||||||||||||||||    
T  9388953 ttaatagaattgaatgctagtctcacccttaccttaagaattgaaatcgcagctctctaggtcttcctcccttctcttggctttttctcccttttctcca 9388854  T
Q  358 aagttgatcatacg 371  Q
    || |||||| ||||    
T  9388853 aaattgatcgtacg 9388840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 359
Target Start/End: Complemental strand, 17180556 - 17180463
Alignment:
Q  266 attgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||| || |||||||| ||||||||||| | | ||||| ||||| ||| | ||| ||| |||||||||| | |||||||||||||||||||||    
T  17180556 attgaatgctagtctcacccttaccttaatactcaaaatcgcagcactctaggtctcttgctcttctcttggctttttctcccttttctccaaa 17180463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 359
Target Start/End: Complemental strand, 15007685 - 15007582
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagc-tctccatgtcactttctcttctcttagttttttctcccttttctc 355  Q
    ||||| |||||||| || |||||||| ||||||||||  |||  |||||||||| |||| | |||   |||||||||||||| |||||||||||||| ||    
T  15007685 cttaatagaattgaatgctagtctcacccttaccttagaaattgaaattgcagcctctctaggtcttcttctcttctcttagctttttctcccttttttc 15007586  T
Q  356 caaa 359  Q
    ||||    
T  15007585 caaa 15007582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 18006541 - 18006627
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||| | | ||||| ||||| ||| | ||| ||| || ||||||| | |||||||||||||||||||||    
T  18006541 gttagtctcacccttaccttaatactcaaaatcgcagcactctaggtctcttactgttctcttggctttttctcccttttctccaaa 18006627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 9176889 - 9176834
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    ||||||||||||||||| ||||| | |||||| || |||||||| |||||||||||    
T  9176889 aattatcagaattacagacttaataaaattgaatgctagtctcacccttaccttaa 9176834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 11524846 - 11524795
Alignment:
Q  246 agaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    ||||||| | |||||||| |||||| ||||||||||| ||||||||||||||    
T  11524846 agaattataagcttaagaaaattgaatgttagtctcacccttaccttaacaa 11524795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 14037119 - 14037170
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    ||||||||||||| ||||| |||||||| || |||||||| |||||||||||    
T  14037119 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttaa 14037170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 14347149 - 14347200
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    ||||||||||||| ||||| |||||||| || |||||||| |||||||||||    
T  14347149 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttaa 14347200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 11768140 - 11768086
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    |||||||||| ||||||||||  ||||| |||||||| || ||||||||||||||    
T  11768140 atcagaattataggcttaagaagattgaatgttagtcccacccttaccttaacaa 11768086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 366
Target Start/End: Original strand, 11973233 - 11973271
Alignment:
Q  328 cttctcttagttttttctcccttttctccaaagttgatc 366  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  11973233 cttctcttggttttttctcccttttctccaaaattgatc 11973271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 371
Target Start/End: Original strand, 13870331 - 13870373
Alignment:
Q  329 ttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||    
T  13870331 ttctcttggttttttctcccttttctccaaaattgatcgtacg 13870373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 17016647 - 17016593
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    ||||||||||   ||||||||||||||| || |||||||| ||||||||||||||    
T  17016647 atcagaattatcagcttaagagaattgaatgctagtctcacccttaccttaacaa 17016593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 35152482 - 35152516
Alignment:
Q  325 tctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||||||| |||||||||||||||||||||    
T  35152482 tctcttctcttagctttttctcccttttctccaaa 35152516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 37726861 - 37726775
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||  |   ||||| |||||||||   ||| |||||||||||||| | ||||||| |||||||||||||    
T  37726861 gttagtctcacccttaccttagaataaaaaatcgcagctctcttggtctctttctcttctcttggctttttcttccttttctccaaa 37726775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 457420 - 457449
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  457420 cccccaaaactctctaaaatctcataacaa 457449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 1867289 - 1867232
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    |||| |||||||||||||| ||||| |  ||||| |||||||||| ||||||||||||    
T  1867289 acaactatcagaattacagacttaataagattgaatgttagtctcgtccttaccttaa 1867232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Original strand, 9512284 - 9512329
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  9512284 ctcttctcttggctttttctcccttttctccaaaattgatcgtacg 9512329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 11392368 - 11392339
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  11392368 cccccaaaactctctaaaatctcataacaa 11392339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 14948185 - 14948156
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  14948185 cccccaaaactctctaaaatctcataacaa 14948156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 474
Target Start/End: Complemental strand, 15081054 - 15081021
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaacacc 474  Q
    ||||||||||||||||||||| ||||||||||||    
T  15081054 cccccaaaactctctaaaatcccataacaacacc 15081021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 15375779 - 15375750
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  15375779 cccccaaaactctctaaaatctcataacaa 15375750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 16233620 - 16233649
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  16233620 cccccaaaactctctaaaatctcataacaa 16233649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 16411157 - 16411186
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  16411157 cccccaaaactctctaaaatctcataacaa 16411186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 20384189 - 20384160
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  20384189 cccccaaaactctctaaaatctcataacaa 20384160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 24703320 - 24703349
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  24703320 cccccaaaactctctaaaatctcataacaa 24703349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 24705767 - 24705796
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  24705767 cccccaaaactctctaaaatctcataacaa 24705796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 26355045 - 26355016
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  26355045 cccccaaaactctctaaaatctcataacaa 26355016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 26357497 - 26357468
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  26357497 cccccaaaactctctaaaatctcataacaa 26357468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 27217958 - 27217987
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  27217958 cccccaaaactctctaaaatctcataacaa 27217987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 41524016 - 41524045
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  41524016 cccccaaaactctctaaaatctcataacaa 41524045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 41526478 - 41526507
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  41526478 cccccaaaactctctaaaatctcataacaa 41526507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 474
Target Start/End: Original strand, 44015246 - 44015279
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaacacc 474  Q
    |||||||||||||||||||||||| |||||||||    
T  44015246 cccccaaaactctctaaaatctcaaaacaacacc 44015279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 359
Target Start/End: Complemental strand, 26469 - 26346
Alignment:
Q  237 acaattatcagaattacag-gcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctctt 335  Q
    ||||| ||||||||||||  | |||| |||||||| || |||||||| |||||||||| |||||||||| |||||||||   ||||||||||||||||||    
T  26469 acaatcatcagaattacataggttaatagaattgaatgctagtctcacccttaccttagcaatgaaaatcgcagctctcttggtcactttctcttctctt 26370  T
Q  336 agttttttctcccttttctccaaa 359  Q
     | |||||||||||||||||||||    
T  26369 ggctttttctcccttttctccaaa 26346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 22173033 - 22172901
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagt 338  Q
    |||||||| ||| | ||||||||||  ||||| ||||||||||| ||||||||||||||||||||| ||||||||| |  |   | ||||||||||| |     
T  22173033 aattatcataatcataggcttaagaagattgaatgttagtctcacccttaccttaacaatgaaaatcgcagctctctagatgcttctctcttctcttggc 22172934  T
Q  339 tttttctcccttttctccaaagttgatcatacg 371  Q
    ||||||||||||||||||||| |||||| ||||    
T  22172933 tttttctcccttttctccaaaattgatcgtacg 22172901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 7680180 - 7680281
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| ||||||||||||||||||||||  |   ||||| ||||| ||| | ||| ||| |||||||||||| |||||||||||||||||||    
T  7680180 ttaatagaattgaatgttagtctcatccttaccttagaatcaaaaatcgcagcactctaggtctcttgctcttctcttagctttttctcccttttctcca 7680279  T
Q  358 aa 359  Q
    ||    
T  7680280 aa 7680281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 26393324 - 26393378
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  26393324 atcagaattacagacttaagagaattgaatgttagtctcacccttaccttaacaa 26393378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 24528923 - 24528846
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctc 314  Q
    |||||| ||||||| | || || ||||  ||||| ||||||||||| ||||||||||||||||||||| |||||||||    
T  24528923 acaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttaacaatgaaaatcgcagctctc 24528846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 25176726 - 25176827
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| ||||||||||| ||||||||||   || ||||| ||| | ||| | ||| ||| |||||||||| | |||||||||||||||||||    
T  25176726 ttaatagaattgaatgttagtctcacccttaccttattgatcaaaatcgcaacactctaggtctcttgctcttctcttggctttttctcccttttctcca 25176825  T
Q  358 aa 359  Q
    ||    
T  25176826 aa 25176827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 32451151 - 32451110
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctc 314  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  32451151 gttagtctcatccttaccttaacaatgaaaatcgcagctctc 32451110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 27845559 - 27845614
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaat 298  Q
    |||||||||| || ||||||| |||||| ||||||||||| |||||||||||||||    
T  27845559 atcagaattatagacttaagaaaattgaatgttagtctcacccttaccttaacaat 27845614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 7187422 - 7187477
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    |||||||||||| | ||||||||||  ||||| ||||||||||| |||||||||||    
T  7187422 aattatcagaatcataggcttaagaagattgaatgttagtctcacccttaccttaa 7187477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 371
Target Start/End: Original strand, 24941687 - 24941730
Alignment:
Q  328 cttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||| | ||||||||||||||||||||| |||||||||||    
T  24941687 cttctcttggctttttctcccttttctccaaaattgatcatacg 24941730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 25109790 - 25109841
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    ||||||||||||| ||||| |||||||| || |||||||| |||||||||||    
T  25109790 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttaa 25109841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 18546193 - 18546139
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    |||||||||| || ||||||| ||||||  |||||||||| ||||||||||||||    
T  18546193 atcagaattatagacttaagaaaattgaacgttagtctcacccttaccttaacaa 18546139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 18786045 - 18785944
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaatt-gcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    |||| |||||||| || |||||||| |||||||| || ||| |||| | |||||||||   ||| |||||||||||||| | |||||||||||||||| |    
T  18786045 ttaatagaattgaatgctagtctcacccttacct-aagaataaaaaatcgcagctctcttggtctctttctcttctcttggctttttctcccttttctgc 18785947  T
Q  357 aaa 359  Q
    |||    
T  18785946 aaa 18785944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 19672770 - 19672820
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta 293  Q
    ||||||||||||| ||||| |||||||| || |||||||| ||||||||||    
T  19672770 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 19672820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 21153992 - 21153962
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  21153992 cccccaaaactctctaaaatctcataacaac 21153962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 24368818 - 24368848
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  24368818 cccccaaaactctctaaaatctcataacaac 24368848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 25616779 - 25616809
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  25616779 cccccaaaactctctaaaatctcataacaac 25616809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 572495 - 572524
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  572495 cccccaaaactctctaaaatctcataacaa 572524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 18810040 - 18810069
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  18810040 cccccaaaactctctaaaatctcataacaa 18810069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 23067768 - 23067735
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| |||||||||||||||||||||||    
T  23067768 ctcttctcttggttttttctcccttttctccaaa 23067735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 23131959 - 23131988
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  23131959 cccccaaaactctctaaaatctcataacaa 23131988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 23134426 - 23134455
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  23134426 cccccaaaactctctaaaatctcataacaa 23134455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 23136664 - 23136693
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  23136664 cccccaaaactctctaaaatctcataacaa 23136693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Complemental strand, 23653578 - 23653533
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||| ||||||| ||||||||||||||||||||| |||||| ||||    
T  23653578 ctctcctcttagctttttctcccttttctccaaaattgatcgtacg 23653533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 23711079 - 23711050
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  23711079 cccccaaaactctctaaaatctcataacaa 23711050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 24897267 - 24897238
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  24897267 cccccaaaactctctaaaatctcataacaa 24897238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 24899750 - 24899721
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  24899750 cccccaaaactctctaaaatctcataacaa 24899721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 24902227 - 24902198
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  24902227 cccccaaaactctctaaaatctcataacaa 24902198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 24904704 - 24904675
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  24904704 cccccaaaactctctaaaatctcataacaa 24904675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 24907179 - 24907150
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  24907179 cccccaaaactctctaaaatctcataacaa 24907150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 26506473 - 26506502
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  26506473 cccccaaaactctctaaaatctcataacaa 26506502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 27919832 - 27919803
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  27919832 cccccaaaactctctaaaatctcataacaa 27919803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 32038563 - 32038534
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  32038563 cccccaaaactctctaaaatctcataacaa 32038534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 34401588 - 34401559
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  34401588 cccccaaaactctctaaaatctcataacaa 34401559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 39683413 - 39683442
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  39683413 cccccaaaactctctaaaatctcataacaa 39683442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 359
Target Start/End: Complemental strand, 52522957 - 52522863
Alignment:
Q  265 aattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||| || |||||||| ||||||||||||||||||||| |||||||||   |||||||| ||||||||| | |||||||||||||||||||||    
T  52522957 aattgaatgatagtctcacccttaccttaacaatgaaaatcgcagctctcttggtcactttatcttctcttggctttttctcccttttctccaaa 52522863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 2044891 - 2044790
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| ||||||||||| |||||||||| |||||||||| |||||||||   ||| ||||||||||| || | |||||||||||||||||||    
T  2044891 ttaatagaattgaatgttagtctcacccttaccttagcaatgaaaatcgcagctctcttggtctctttctcttcttttggctttttctcccttttctcca 2044792  T
Q  358 aa 359  Q
    ||    
T  2044791 aa 2044790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 2047620 - 2047519
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| ||||||||||| |||||||||| |||||||||| |||||||||   ||| ||||||||||| || | |||||||||||||||||||    
T  2047620 ttaatagaattgaatgttagtctcacccttaccttagcaatgaaaatcgcagctctcttggtctctttctcttcttttggctttttctcccttttctcca 2047521  T
Q  358 aa 359  Q
    ||    
T  2047520 aa 2047519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 50243809 - 50243884
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctc 314  Q
    |||||| ||||| ||||||||||||  ||||| ||||||||||| ||||||||||||||||||||| |||||||||    
T  50243809 aattatgagaatcacaggcttaagaagattgaatgttagtctcacccttaccttaacaatgaaaatcgcagctctc 50243884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 356
Target Start/End: Complemental strand, 12171366 - 12171283
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| | |||  | || |||||||| ||||||||||||||||||||    
T  12171366 gttagtctcacccttaccttaacaatgaaaatcgcagcactctaggtctttctcccttctcttggttttttctcccttttctcc 12171283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 53069921 - 53069823
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| |||||||||||||||||||||  |||||||| | ||   | || |||||||| | ||||||||||||||||||||| |||||| ||||    
T  53069921 gttagtctcacccttaccttaacaatgaaaatcacagctctctaggtgcttctcccttctcttggatttttctcccttttctccaaaattgatcgtacg 53069823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 366
Target Start/End: Original strand, 36167551 - 36167674
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttt 342  Q
    ||||| ||||||| ||||| |  ||||| ||||||||||| ||||||||||||||| ||||| ||||||  | | |||  |||||||||||||    |||    
T  36167551 atcaggattacagacttaataagattgaatgttagtctcacccttaccttaacaatcaaaatcgcagcttcctaggtctttttctcttctcttgaccttt 36167650  T
Q  343 tctcccttttctccaaagttgatc 366  Q
    |||||||||||| |||| ||||||    
T  36167651 tctcccttttcttcaaaattgatc 36167674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 53300881 - 53300807
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagct 311  Q
    ||||| ||||||||||||| ||||| |||||||| || ||||||||  |||||||||||||| ||||| ||||||    
T  53300881 acaatcatcagaattacagacttaatagaattgaatgctagtctcactcttaccttaacaatcaaaatcgcagct 53300807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 359
Target Start/End: Complemental strand, 1464661 - 1464567
Alignment:
Q  265 aattgattgttagtctcatccttaccttaacaatga-aaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||| |||||||| ||||||||||  ||| | |||| ||||| ||| |  ||||||||||||||||| | |||||||||||||||||||||    
T  1464661 aattgattgctagtctcacccttaccttag-aatcagaaatcgcagcactctagatcactttctcttctcttggctttttctcccttttctccaaa 1464567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 366
Target Start/End: Original strand, 8500305 - 8500436
Alignment:
Q  237 acaattatcagaattacag-gcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctcc-atgtcactttctcttctct 334  Q
    ||||| ||||||||||||  | |||| |||||||   |||||||||| ||||||||||  | | ||||| ||||| |||| | ||| ||| |||||||||    
T  8500305 acaatcatcagaattacatagattaatagaattgtaagttagtctcacccttaccttataactcaaaatcgcagcactcctaggtctcttgctcttctct 8500404  T
Q  335 tagttttttctcccttttctccaaagttgatc 366  Q
    | | ||||||||||||||||||||| ||||||    
T  8500405 tggctttttctcccttttctccaaaattgatc 8500436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 371
Target Start/End: Complemental strand, 29171874 - 29171775
Alignment:
Q  272 tgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    ||||||||||| ||||||||||||||||||||| |||||| || | ||   | || |||||||| |  ||||||| |||||||||||| |||||| ||||    
T  29171874 tgttagtctcacccttaccttaacaatgaaaatcgcagctttctaggttgttctcccttctcttggcgttttctctcttttctccaaaattgatcgtacg 29171775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 32402232 - 32402182
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta 293  Q
    |||||||||||| ||||||||||||||| |||||||| || ||||||||||    
T  32402232 atcagaattacaagcttaagagaattgaatgttagtcccacccttacctta 32402182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 359
Target Start/End: Complemental strand, 37250353 - 37250251
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    ||||| |||||||| ||||||||||| ||||||||||  |||  |||| ||||||||| | |||   ||| |||||||| | ||||||| ||||||||||    
T  37250353 cttaatagaattgaatgttagtctcacccttaccttagaaattgaaatcgcagctctctaggtcttcttcccttctcttggctttttcttccttttctcc 37250254  T
Q  357 aaa 359  Q
    |||    
T  37250253 aaa 37250251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 359
Target Start/End: Original strand, 17738182 - 17738298
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta-acaatgaaaattgcagctctccatgtcactttctcttctcttagtttt 341  Q
    ||||||||||||| ||||| |||||||| || |||||||| |||||||||| |  | |||||| ||||| ||| ||||   | || |||||||| | |||    
T  17738182 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaataagaaaatcgcagc-ctctatgtgcttctcccttctcttggcttt 17738280  T
Q  342 ttctcccttttctccaaa 359  Q
    ||||||||||||||||||    
T  17738281 ttctcccttttctccaaa 17738298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 359
Target Start/End: Original strand, 19039502 - 19039618
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta-acaatgaaaattgcagctctccatgtcactttctcttctcttagtttt 341  Q
    ||||||||||||| ||||| |||||||| || |||||||| |||||||||| |  | |||||| ||||| ||| ||||   | || |||||||| | |||    
T  19039502 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaataagaaaatcgcagc-ctctatgtgcttctcccttctcttggcttt 19039600  T
Q  342 ttctcccttttctccaaa 359  Q
    ||||||||||||||||||    
T  19039601 ttctcccttttctccaaa 19039618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 359
Target Start/End: Original strand, 23275566 - 23275682
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta-acaatgaaaattgcagctctccatgtcactttctcttctcttagtttt 341  Q
    ||||||||||||| ||||| |||||||| || |||||||| |||||||||| |  |||||||| ||||| ||| ||||   | || ||||| || | |||    
T  23275566 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaatatgaaaatcgcagc-ctctatgtgcttctcccttctattggcttt 23275664  T
Q  342 ttctcccttttctccaaa 359  Q
    ||||||||||||||||||    
T  23275665 ttctcccttttctccaaa 23275682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 23317974 - 23317933
Alignment:
Q  256 gcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  23317974 gcttaagagaattgaatgttagtctcacccttaccttaacaa 23317933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 13919770 - 13919821
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    ||||||||||   ||||||||||||||| ||||||||||| |||||||||||    
T  13919770 atcagaattatcagcttaagagaattgaatgttagtctcacccttaccttaa 13919821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 371
Target Start/End: Complemental strand, 22109537 - 22109400
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactt---tctcttctc 333  Q
    |||| |||||||||||||| ||||| | |||||   |||||||||| ||||||||||  ||| ||||| |||||||||   ||   ||   |||||||||    
T  22109537 acaactatcagaattacagacttaatataattgtaagttagtctcacccttaccttagaaatcaaaatcgcagctctcttggtggtttttctctcttctc 22109438  T
Q  334 ttagttttttctcccttttctccaaagttgatcatacg 371  Q
    ||   ||||||||||||||||||||| |||||| ||||    
T  22109437 ttgactttttctcccttttctccaaacttgatcgtacg 22109400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 26054484 - 26054413
Alignment:
Q  244 tcagaattacaggcttaagagaattgattgttagtctcatccttacctt-aacaatgaaaattgcagctctc 314  Q
    ||||||| | ||||||||||  ||||| ||||||||||| ||||||||| || ||||||||| |||||||||    
T  26054484 tcagaatcataggcttaagaatattgaatgttagtctcacccttaccttaaagaatgaaaatcgcagctctc 26054413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 320172 - 320210
Alignment:
Q  256 gcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  320172 gcttaagagaattgaatgttagtctcacccttaccttaa 320210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 6468177 - 6468147
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  6468177 cccccaaaactctctaaaatctcataacaac 6468147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Original strand, 14973830 - 14973872
Alignment:
Q  328 cttctcttagttttttctcccttttctccaaagttgatcatac 370  Q
    |||||||| | ||||||||||||||||||||| ||||||||||    
T  14973830 cttctcttggctttttctcccttttctccaaaattgatcatac 14973872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 15207837 - 15207891
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    |||||||||| | | |||||| |||||| ||||||||||| ||||||||||||||    
T  15207837 atcagaattataagtttaagaaaattgaatgttagtctcacccttaccttaacaa 15207891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 16281928 - 16281898
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  16281928 cccccaaaactctctaaaatctcataacaac 16281898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 311
Target Start/End: Complemental strand, 17247508 - 17247470
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagct 311  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  17247508 gttagtctcacccttaccttaacaatgaaaatcgcagct 17247470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 29171706 - 29171676
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  29171706 cccccaaaactctctaaaatctcataacaac 29171676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 36167734 - 36167764
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  36167734 cccccaaaactctctaaaatctcataacaac 36167764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 7780419 - 7780390
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  7780419 cccccaaaactctctaaaatctcataacaa 7780390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 8500511 - 8500540
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  8500511 cccccaaaactctctaaaatctcataacaa 8500540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 9117299 - 9117270
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  9117299 cccccaaaactctctaaaatctcataacaa 9117270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 10246788 - 10246759
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  10246788 cccccaaaactctctaaaatctcataacaa 10246759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 13150854 - 13150825
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  13150854 cccccaaaactctctaaaatctcataacaa 13150825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 13153322 - 13153293
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  13153322 cccccaaaactctctaaaatctcataacaa 13153293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 16453340 - 16453311
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  16453340 cccccaaaactctctaaaatctcataacaa 16453311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 17464274 - 17464303
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  17464274 cccccaaaactctctaaaatctcataacaa 17464303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 21619600 - 21619629
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  21619600 cccccaaaactctctaaaatctcataacaa 21619629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Complemental strand, 24339792 - 24339763
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaac 471  Q
    ||||||||||||||||||||||||||||||    
T  24339792 ccccaaaactctctaaaatctcataacaac 24339763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 27166243 - 27166272
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  27166243 cccccaaaactctctaaaatctcataacaa 27166272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 28847684 - 28847655
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  28847684 cccccaaaactctctaaaatctcataacaa 28847655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 34160422 - 34160451
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  34160422 cccccaaaactctctaaaatctcataacaa 34160451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 43843078 - 43843115
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagc 310  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  43843078 gttagtctcacccttaccttaacaatgaaaatcgcagc 43843115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 45605992 - 45605963
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  45605992 cccccaaaactctctaaaatctcataacaa 45605963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 55477585 - 55477614
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  55477585 cccccaaaactctctaaaatctcataacaa 55477614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 21619402 - 21619474
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctcc 315  Q
    ||||||||||||| ||||| |  ||||| ||||||||||| ||||||||||   |||||||| ||||| ||||    
T  21619402 atcagaattacagacttaataagattgaatgttagtctcacccttaccttatagatgaaaatcgcagcactcc 21619474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 54; Significance: 8e-22; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 33378 - 33478
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || |||||||| |||||||||| |||||||||| |||||| || | |||||||||||||||||| | |||||||||||||||||||    
T  33378 ttaatagaattgaatgctagtctcacccttaccttagcaatgaaaatcgcagct-tctaggtcactttctcttctcttggctttttctcccttttctcca 33476  T
Q  358 aa 359  Q
    ||    
T  33477 aa 33478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 51106 - 51020
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||  |   ||||| |||||||||   ||| |||||||||||||| | |||||||||||||||||||||    
T  51106 gttagtctcacccttaccttagaatcaaaaatcgcagctctcttggtctctttctcttctcttggctttttctcccttttctccaaa 51020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 15842 - 15808
Alignment:
Q  325 tctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||||||| |||||||||||||||||||||    
T  15842 tctcttctcttagctttttctcccttttctccaaa 15808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 52242453 - 52242352
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || |||||||| |||||||||| |||||||||| ||||||||| | ||  |||||||||||||| | |||||||||||||||||||    
T  52242453 ttaatagaattgaatgctagtctcacccttaccttagcaatgaaaatcgcagctctctaggtttctttctcttctcttggctttttctcccttttctcca 52242354  T
Q  358 aa 359  Q
    ||    
T  52242353 aa 52242352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 371
Target Start/End: Complemental strand, 14970083 - 14969949
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctctta 336  Q
    |||||| ||||||| |||| || ||||  ||||| ||||||||||| ||||||||||||||||||||| |||||| || | ||   | || ||||||||     
T  14970083 acaattttcagaatcacagactcaagattattgaatgttagtctcacccttaccttaacaatgaaaatcgcagctttctaggttgttctcccttctcttg 14969984  T
Q  337 gttttttctcccttttctccaaagttgatcatacg 371  Q
    | ||||||||||||||||||||| |||||| ||||    
T  14969983 gctttttctcccttttctccaaaattgatcgtacg 14969949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 364
Target Start/End: Original strand, 6191332 - 6191423
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttga 364  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| |||||||||| |||||||||||| ||||    
T  6191332 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgcttctcccttctcttggttttttctctcttttctccaaaattga 6191423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 359
Target Start/End: Complemental strand, 11051 - 10957
Alignment:
Q  265 aattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||| || |||||||| |||||||||| |||||||||| ||||||||  | |||   |||||||||||| | |||||||||||||||||||||    
T  11051 aattgaatgctagtctcacccttaccttagcaatgaaaatcgcagctctaaaggtcctcttctcttctcttggctttttctcccttttctccaaa 10957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 12287389 - 12287287
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaatt-gcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    |||| |||||||| ||| ||||||| ||||||||||| ||| |||| | |||||||||   ||| |||||||||||||| | ||||||||||||||||||    
T  12287389 ttaatagaattgaatgtcagtctcacccttaccttaagaatcaaaaatcgcagctctcttggtctctttctcttctcttggctttttctcccttttctcc 12287290  T
Q  357 aaa 359  Q
    |||    
T  12287289 aaa 12287287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 44103109 - 44103207
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| | ||||||||| |||| |||||| |||||| ||||    
T  44103109 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgtttctcccttctcttggctttttctcctttttttccaaaattgatcgtacg 44103207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 366
Target Start/End: Original strand, 7799525 - 7799618
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatc 366  Q
    |||||||||| ||||||||||||||||||||| |||||| || | ||   | ||  ||||||| | ||||||||||||||||||||| ||||||    
T  7799525 gttagtctcacccttaccttaacaatgaaaatcgcagctttctaggttgttctccattctcttggctttttctcccttttctccaaaattgatc 7799618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 371
Target Start/End: Complemental strand, 19617451 - 19617317
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctctta 336  Q
    |||||| ||||||| | || || ||||  ||||| |||||||| || |||||||||||||||||||||  ||||| || | ||| || || ||||||||     
T  19617451 acaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaacaatgaaaatcacagct-tctaggtctctctcccttctcttg 19617353  T
Q  337 gttttttct-cccttttctccaaagttgatcatacg 371  Q
    | ||||||| |||||||||||||| |||||| ||||    
T  19617352 gctttttctccccttttctccaaaattgatcgtacg 19617317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 365
Target Start/End: Complemental strand, 51463084 - 51462957
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaaca-atgaaaattgcagctctccatgtcactttctcttctcttag 337  Q
    |||||||| ||| | ||||||||||  ||||| ||||||||||| |||||||||   | || ||||| ||||||  | | ||| || || |||||||| |    
T  51463084 aattatcaaaatcataggcttaagaagattgaatgttagtctcacccttaccttggaatataaaaatcgcagcttcctaggtctctctcccttctcttgg 51462985  T
Q  338 ttttttctcccttttctccaaagttgat 365  Q
    |||||||||||||||||||||| |||||    
T  51462984 ttttttctcccttttctccaaaattgat 51462957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 21817944 - 21817858
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| | ||||| ||| |||||||||||    
T  21817944 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgtttctcccttctcttggctttttttccattttctccaaa 21817858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 39705522 - 39705420
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctcc-atgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    |||| |||| ||| || |||||||| ||||||||||| ||| ||||| |||||||| | | | |  ||||||||||||| ||||||||||| ||||||||    
T  39705522 ttaatagaaatgaatgctagtctcacccttaccttaataatcaaaatcgcagctcttctaggactttttctcttctcttggttttttctccattttctcc 39705423  T
Q  357 aaa 359  Q
    |||    
T  39705422 aaa 39705420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 359
Target Start/End: Complemental strand, 23802460 - 23802340
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagt 338  Q
    |||||||||||| | ||||||||||  ||||| ||||||||||| ||||||||||   || ||||| ||||| ||| | ||   | || |||||||| |     
T  23802460 aattatcagaatcataggcttaagaagattgaatgttagtctcacccttaccttatggatcaaaatcgcagcactctaggtttttctcccttctcttggc 23802361  T
Q  339 tttttctcccttttctccaaa 359  Q
    ||||||| |||||||||||||    
T  23802360 tttttcttccttttctccaaa 23802340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 12611907 - 12611962
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    |||||||||||| | ||||||||||  ||||| ||||||||||| |||||||||||    
T  12611907 aattatcagaatcataggcttaagaagattgaatgttagtctcacccttaccttaa 12611962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 228
Target Start/End: Original strand, 12841506 - 12841537
Alignment:
Q  197 tcacttttaacctaattctccaattctcaaaa 228  Q
    ||||||||||||||||||||||||||||||||    
T  12841506 tcacttttaacctaattctccaattctcaaaa 12841537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 480
Target Start/End: Complemental strand, 14969878 - 14969839
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaacaccaaactc 480  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  14969878 cccccaaaactctctaaaatctcataacaaccctaaactc 14969839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 15792696 - 15792750
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    |||||||| | |||||||||| |||||| |||||||| || ||||||||||||||    
T  15792696 atcagaatcataggcttaagaaaattgaatgttagtcccacccttaccttaacaa 15792750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 19617246 - 19617216
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  19617246 cccccaaaactctctaaaatctcataacaac 19617216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 51462880 - 51462850
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  51462880 cccccaaaactctctaaaatctcataacaac 51462850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 52313746 - 52313776
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  52313746 cccccaaaactctctaaaatctcataacaac 52313776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 1836585 - 1836556
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  1836585 cccccaaaactctctaaaatctcataacaa 1836556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 7640252 - 7640223
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  7640252 cccccaaaactctctaaaatctcataacaa 7640223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 12032837 - 12032808
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  12032837 cccccaaaactctctaaaatctcataacaa 12032808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Original strand, 14281470 - 14281499
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaac 471  Q
    ||||||||||||||||||||||||||||||    
T  14281470 ccccaaaactctctaaaatctcataacaac 14281499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 14717785 - 14717756
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  14717785 cccccaaaactctctaaaatctcataacaa 14717756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 15117418 - 15117389
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  15117418 cccccaaaactctctaaaatctcataacaa 15117389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 44616384 - 44616413
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  44616384 cccccaaaactctctaaaatctcataacaa 44616413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 50221405 - 50221376
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  50221405 cccccaaaactctctaaaatctcataacaa 50221376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 7089818 - 7089858
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatc 366  Q
    |||||||||| | ||||||||||||||||||||| ||||||    
T  7089818 ctcttctctttgctttttctcccttttctccaaaattgatc 7089858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 23651620 - 23651656
Alignment:
Q  323 tttctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||||||| | |||||||||||||||||||||    
T  23651620 tttctcttctcttggctttttctcccttttctccaaa 23651656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 8e-22; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 52927287 - 52927187
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| ||||||||||| |||||||||| |||||||||| ||||| ||| | ||| |||||||||||||| | |||||||||||||||||||    
T  52927287 ttaatagaattgaatgttagtctcacccttaccttagcaatgaaaatcgcagc-ctctaggtcgctttctcttctcttggctttttctcccttttctcca 52927189  T
Q  358 aa 359  Q
    ||    
T  52927188 aa 52927187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 359
Target Start/End: Complemental strand, 21857106 - 21857022
Alignment:
Q  275 tagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||| ||||||||||||||||||||| |||||||||   ||| |||||||||||||| | |||||||||||||||||||||    
T  21857106 tagtctcacccttaccttaacaatgaaaatcgcagctctctgggtctctttctcttctcttggctttttctcccttttctccaaa 21857022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 433906 - 434004
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| | ||||||||||||||||||||| |||||| ||||    
T  433906 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgcttctcccttctcttggctttttctcccttttctccaaaattgatcgtacg 434004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 15859367 - 15859239
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttt 342  Q
    ||||||||||||| ||||| |||||| | || |||||||| ||||||||||| ||| ||||| ||||||    | |||  | || |||||||| | ||||    
T  15859367 atcagaattacagacttaatagaattaaatgctagtctcacccttaccttaataatcaaaatcgcagcttcgtaggtctttctcccttctcttggctttt 15859268  T
Q  343 tctcccttttctccaaagttgatcatacg 371  Q
    ||||||||||||||||| |||||||||||    
T  15859267 tctcccttttctccaaaattgatcatacg 15859239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 16759610 - 16759711
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || |||||||| |||||||||| |||||||||| ||||||||  | |||   |||||||||||| | ||||| |||||||||||||    
T  16759610 ttaatagaattgaatgctagtctcacccttaccttagcaatgaaaatcgcagctctaaaggtcctcttctcttctcttggctttttatcccttttctcca 16759709  T
Q  358 aa 359  Q
    ||    
T  16759710 aa 16759711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 20249177 - 20249263
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||||| ||||||| ||||| ||| | |||  | || |||||||| | |||||||||||||||||||||    
T  20249177 gttagtctcacccttaccttaacagtgaaaatcgcagcactctaggtctttctcccttctcttggctttttctcccttttctccaaa 20249263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 352
Target Start/End: Complemental strand, 20453690 - 20453577
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagt 338  Q
    |||||||| ||| | ||||||||||  ||||| ||||||||||| ||||||||||||||| ||||| ||||||  | |  ||  | || ||||||||||     
T  20453690 aattatcaaaatcataggcttaagaagattgaatgttagtctcacccttaccttaacaatcaaaatcgcagcttgctagatctttctcccttctcttagc 20453591  T
Q  339 tttttctccctttt 352  Q
    ||||||||||||||    
T  20453590 tttttctccctttt 20453577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 371
Target Start/End: Original strand, 21841683 - 21841798
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctcc-atgtcactttctcttctcttagttttttctcccttttctc 355  Q
    |||||||  ||||| ||||||||||| ||||||||||  | | ||||| |||||  ||| | ||| ||| |||||||||| | |||||||||||||||||    
T  21841683 cttaagattattgaatgttagtctcacccttaccttataactcaaaatcgcagcaatcctaggtctcttgctcttctcttggctttttctcccttttctc 21841782  T
Q  356 caaagttgatcatacg 371  Q
    |||| |||||| ||||    
T  21841783 caaaattgatcgtacg 21841798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 29777554 - 29777653
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctcc-atgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||  | | ||||| ||||| |||| | ||| ||| ||||||||| || ||||||||||||||||||||| |||||| ||||    
T  29777554 gttagtctcacccttaccttataactcaaaatcgcagcactcctaggtctcttgctcttctctcagctttttctcccttttctccaaaattgatcgtacg 29777653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 21683898 - 21683952
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    |||||||||| || ||||||| |||||| ||||||||||| ||||||||||||||    
T  21683898 atcagaattatagacttaagaaaattgaatgttagtctcacccttaccttaacaa 21683952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 359
Target Start/End: Complemental strand, 14294778 - 14294662
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta-acaatgaaaattgcagctctccatgtcactttctcttctcttagtttt 341  Q
    ||||||||||||| ||||| |||||||| || |||||||| |||||||||| |  | |||||| ||||| ||| ||||   | || |||||||| | |||    
T  14294778 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaataagaaaatcgcagc-ctctatgtgtttctcccttctcttggcttt 14294680  T
Q  342 ttctcccttttctccaaa 359  Q
    ||||||||||||||||||    
T  14294679 ttctcccttttctccaaa 14294662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 21746844 - 21746924
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctcc-atgtcactttctcttctcttagttttttctccctttt 352  Q
    |||||||||| ||||||||||| ||| ||||| ||||| |||| | ||| ||| |||||||||| | ||||||||||||||    
T  21746844 gttagtctcacccttaccttaataatcaaaatcgcagcactcctaggtctcttgctcttctcttggctttttctccctttt 21746924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 13880592 - 13880537
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    |||||||||||| ||||||||||||  ||||| |||||||| || |||||||||||    
T  13880592 aattatcagaatcacaggcttaagaagattgaatgttagtcccacccttaccttaa 13880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 359
Target Start/End: Complemental strand, 35980917 - 35980823
Alignment:
Q  265 aattgattgttagtctcatccttaccttaacaatga-aaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||| |||||||| ||||||||||  ||| | |||| ||||| |||||  |||||||||||||||||   ||||||||| |||||||||||    
T  35980917 aattgattgctagtctcacccttaccttag-aatcagaaatcgcagcactccagatcactttctcttctcttgactttttctcctttttctccaaa 35980823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 371
Target Start/End: Complemental strand, 41230903 - 41230860
Alignment:
Q  328 cttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||    
T  41230903 cttctctttgttttttctcccttttctccaaaattgatcgtacg 41230860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 48521409 - 48521464
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    |||||||||||| ||||||||||||  ||||| |||||||| || |||||||||||    
T  48521409 aattatcagaatcacaggcttaagaagattgaatgttagtcccacccttaccttaa 48521464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 21616363 - 21616397
Alignment:
Q  325 tctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||||||| |||||||||||||||||||||    
T  21616363 tctcttctcttagctttttctcccttttctccaaa 21616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 21708348 - 21708378
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  21708348 cccccaaaactctctaaaatctcataacaac 21708378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 21712891 - 21712921
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  21712891 cccccaaaactctctaaaatctcataacaac 21712921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 22129874 - 22129844
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  22129874 cccccaaaactctctaaaatctcataacaac 22129844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 27652442 - 27652392
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta 293  Q
    ||||||||||||| ||||| |||||||| || |||||||| ||||||||||    
T  27652442 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 27652392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 359
Target Start/End: Complemental strand, 41049208 - 41049106
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    ||||| |||||||| || |||||||| ||||||||||  |||  |||| ||||| ||| | |||   ||| |||||||| | ||||||||||||||||||    
T  41049208 cttaatagaattgaatgctagtctcacccttaccttagaaattgaaatcgcagccctctaggtcctcttcacttctcttggctttttctcccttttctcc 41049109  T
Q  357 aaa 359  Q
    |||    
T  41049108 aaa 41049106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 41230789 - 41230759
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  41230789 cccccaaaactctctaaaatctcataacaac 41230759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 51131458 - 51131508
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta 293  Q
    ||||||||||||| ||||| |||||||| || |||||||| ||||||||||    
T  51131458 atcagaattacagacttaatagaattgaatgctagtctcacccttacctta 51131508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 1573782 - 1573753
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  1573782 cccccaaaactctctaaaatctcataacaa 1573753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 9044369 - 9044340
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  9044369 cccccaaaactctctaaaatctcataacaa 9044340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 10827785 - 10827814
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  10827785 cccccaaaactctctaaaatctcataacaa 10827814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 13989962 - 13989991
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  13989962 cccccaaaactctctaaaatctcataacaa 13989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 16363016 - 16363045
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  16363016 cccccaaaactctctaaaatctcataacaa 16363045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Original strand, 20136140 - 20136185
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  20136140 ctcttctcttggctttttctcccttttctccaaaattgatcgtacg 20136185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 359
Target Start/End: Original strand, 21027623 - 21027656
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| |||||||||||||||||||||||    
T  21027623 ctcttctcttggttttttctcccttttctccaaa 21027656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 21342993 - 21343046
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaaca 296  Q
    ||||||||||||| ||||| |||||||| || ||||| || |||||||||||||    
T  21342993 atcagaattacagacttaatagaattgaatgctagtcccacccttaccttaaca 21343046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 21347858 - 21347911
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaaca 296  Q
    ||||||||||||| ||||| |||||||| || ||||| || |||||||||||||    
T  21347858 atcagaattacagacttaatagaattgaatgctagtcccacccttaccttaaca 21347911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 21474150 - 21474121
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  21474150 cccccaaaactctctaaaatctcataacaa 21474121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 21922355 - 21922326
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  21922355 cccccaaaactctctaaaatctcataacaa 21922326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 29777723 - 29777752
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  29777723 cccccaaaactctctaaaatctcataacaa 29777752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 31613420 - 31613469
Alignment:
Q  322 ctttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    ||||| |||||||| ||||||||||| ||||||||||| |||||| ||||    
T  31613420 ctttcccttctcttggttttttctccattttctccaaaattgatcgtacg 31613469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 48444592 - 48444621
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  48444592 cccccaaaactctctaaaatctcataacaa 48444621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 371
Target Start/End: Original strand, 49262008 - 49262121
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || || ||||| ||||||||||  |||  |||| ||||||||| | |||    || |||||||| | |||||||||||||||||||    
T  49262008 ttaatagaattgaatgctaatctcacccttaccttagaaattgaaatcgcagctctctaggtcttcctcccttctcttggctttttctcccttttctcca 49262107  T
Q  358 aagttgatcatacg 371  Q
    || |||||| ||||    
T  49262108 aaattgatcgtacg 49262121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 50799795 - 50799766
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  50799795 cccccaaaactctctaaaatctcataacaa 50799766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 21754941 - 21755021
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctcc-atgtcactttctcttctcttagttttttctccctttt 352  Q
    |||||||||| ||||||||||| ||| ||||| ||| | |||| | ||| ||| |||||||||| | ||||||||||||||    
T  21754941 gttagtctcacccttaccttaataatcaaaatcgcaacactcctaggtctcttgctcttctcttggctttttctccctttt 21755021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 40129771 - 40129807
Alignment:
Q  329 ttctcttagttttttctcccttttctccaaagttgat 365  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  40129771 ttctcttggttttttctcccttttctccaaaattgat 40129807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 9789 - 9703
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| |||||||||| |||||||||| |||||  || | |||||||||||||||||| | |||||||||||||||||||||    
T  9789 gttagtctcacccttaccttagcaatgaaaatcgcagccttctaggtcactttctcttctcttggctttttctcccttttctccaaa 9703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 257 - 351
Target Start/End: Complemental strand, 5360 - 5266
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttt 351  Q
    ||||| |||||||| || |||||||| |||||||||| |||||||||| ||||||||| | ||| |||||||||||||| | |||||||||||||    
T  5360 cttaatagaattgaatgctagtctcacccttaccttagcaatgaaaatcgcagctctctaggtctctttctcttctcttggctttttctcccttt 5266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 474
Target Start/End: Complemental strand, 5176 - 5143
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaacacc 474  Q
    |||||||||||||||||||||||| |||||||||    
T  5176 cccccaaaactctctaaaatctcaaaacaacacc 5143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 371
Target Start/End: Complemental strand, 1326501 - 1326367
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctctta 336  Q
    |||||| ||||||| | || || ||||  ||||| |||||||| || ||||||||||||||||||||||||||||||| | ||   | || ||||||||     
T  1326501 acaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaacaatgaaaattgcagctctctaggtgcttctcccttctcttg 1326402  T
Q  337 gttttttctcccttttctccaaagttgatcatacg 371  Q
    | ||||||||||||||||||||| |||||| ||||    
T  1326401 gctttttctcccttttctccaaaattgatcgtacg 1326367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 19936290 - 19936162
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttt 342  Q
    ||||||||||||| ||||| |||||||| || |||||||| ||||||||||| ||| ||||| ||||||  | | |||  | || |||||||| | ||||    
T  19936290 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttaataataaaaatcgcagcttcctaggtctttctcccttctcttggctttt 19936191  T
Q  343 tctcccttttctccaaagttgatcatacg 371  Q
    ||||| ||||||||||| |||||| ||||    
T  19936190 tctcctttttctccaaaattgatcgtacg 19936162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 20499522 - 20499623
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || |||||||| ||||||||||  | |||||||  ||||||||   ||| |||||||||||||| | |||||||||||||||||||    
T  20499522 ttaatagaattgaatgctagtctcacccttaccttagaattgaaaatcacagctctcttggtctctttctcttctcttggctttttctcccttttctcca 20499621  T
Q  358 aa 359  Q
    ||    
T  20499622 aa 20499623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 365
Target Start/End: Complemental strand, 45289797 - 45289689
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    |||||||  ||||| |||||||| || ||||||||||||||| ||||| ||||||  | | |||  || |||||||||| | ||||||||||||||||||    
T  45289797 cttaagattattgaatgttagtcccacccttaccttaacaatcaaaatcgcagcttcctaggtcttttgctcttctcttggctttttctcccttttctcc 45289698  T
Q  357 aaagttgat 365  Q
    ||| |||||    
T  45289697 aaaattgat 45289689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 18817632 - 18817546
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||||||||||||| ||||||  | | |||  || |||||||||| | ||||||||||||| |||||||    
T  18817632 gttagtctcacccttaccttaacaatgaaaatcgcagcttcctaggtcttttgctcttctcttggctttttctccctttactccaaa 18817546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 21287105 - 21287182
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctctt 335  Q
    |||| |||||||| || |||||||| |||||||||| |||||||||| | ||||||| | || |||||||||||||||    
T  21287105 ttaatagaattgaatgctagtctcacccttaccttagcaatgaaaatcgtagctctctaggttactttctcttctctt 21287182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 359
Target Start/End: Complemental strand, 982607 - 982512
Alignment:
Q  265 aattgattgttagtctcatccttaccttaacaatgaaaatt-gcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||| || |||||||| ||||||||||| ||| |||| | || ||||||   ||| |||||||||||||| | |||||||||||||||||||||    
T  982607 aattgaatgctagtctcacccttaccttaagaatcaaaaatcgcggctctcttggtctctttctcttctcttggctttttctcccttttctccaaa 982512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 15071382 - 15071481
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctcc-atgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||  | | ||||| ||||| |||| | ||| ||| |||||||||| | |||||||||||||||| |||| |||||| ||||    
T  15071382 gttagtctcacccttaccttataactcaaaatcgcagcactcctaggtctcttgctcttctcttggctttttctcccttttcttcaaaattgatcgtacg 15071481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 23649450 - 23649548
Alignment:
Q  273 gttagtctcatccttaccttaaca-atgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||  | |||||| | ||||| ||| | ||| ||| |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  23649450 gttagtctcacccttaccttagaatatgaaa-tcgcagccctctaggtctcttgctcttctcttggctttttctcccttttctccaaaattgatcgtacg 23649548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 19977344 - 19977430
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||   |||||||| ||||| ||   | || ||| |||||||||| | |||||||||||||||||||||    
T  19977344 gttagtctcacccttaccttatagatgaaaatcgcagccctaggtctctcttgctcttctcttggctttttctcccttttctccaaa 19977430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 19983992 - 19984078
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||   |||||||| ||||| ||   | || ||| |||||||||| | |||||||||||||||||||||    
T  19983992 gttagtctcacccttaccttatagatgaaaatcgcagccctaggtctctcttgctcttctcttggctttttctcccttttctccaaa 19984078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 21674555 - 21674641
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||| | | ||| | ||||| ||| |  || ||| |||||||||| | |||||||||||||||||||||    
T  21674555 gttagtctcacccttaccttaatactcaaagtcgcagcactctagatctcttgctcttctcttggctttttctcccttttctccaaa 21674641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 28398490 - 28398540
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta 293  Q
    |||||||| | |||||||||| |||||| ||||||||||| ||||||||||    
T  28398490 atcagaatcataggcttaagaaaattgaatgttagtctcacccttacctta 28398540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 32599555 - 32599589
Alignment:
Q  325 tctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||||||| |||||||||||||||||||||    
T  32599555 tctcttctcttagctttttctcccttttctccaaa 32599589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 371
Target Start/End: Original strand, 32810573 - 32810615
Alignment:
Q  329 ttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    ||||||| | ||||||||||||||||||||| |||||||||||    
T  32810573 ttctcttggctttttctcccttttctccaaaattgatcatacg 32810615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 1485498 - 1485527
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  1485498 cccccaaaactctctaaaatctcataacaa 1485527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 4091619 - 4091648
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  4091619 cccccaaaactctctaaaatctcataacaa 4091648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 4484376 - 4484405
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  4484376 cccccaaaactctctaaaatctcataacaa 4484405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 4541435 - 4541406
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  4541435 cccccaaaactctctaaaatctcataacaa 4541406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 5852358 - 5852329
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  5852358 cccccaaaactctctaaaatctcataacaa 5852329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Complemental strand, 13507002 - 13506973
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaac 471  Q
    ||||||||||||||||||||||||||||||    
T  13507002 ccccaaaactctctaaaatctcataacaac 13506973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 14824873 - 14824902
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  14824873 cccccaaaactctctaaaatctcataacaa 14824902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 18677127 - 18677098
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  18677127 cccccaaaactctctaaaatctcataacaa 18677098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 20537030 - 20537001
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  20537030 cccccaaaactctctaaaatctcataacaa 20537001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 22002852 - 22002881
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  22002852 cccccaaaactctctaaaatctcataacaa 22002881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 22418637 - 22418588
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctt 292  Q
    ||||||||||   ||||||||||||||| ||||||||||| |||||||||    
T  22418637 atcagaattatcagcttaagagaattgaatgttagtctcacccttacctt 22418588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 22526422 - 22526479
Alignment:
Q  254 aggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagct 311  Q
    |||||||||| |||||| ||||||||||| ||||||||||  ||| ||||| ||||||    
T  22526422 aggcttaagaaaattgaatgttagtctcacccttaccttataaatcaaaatcgcagct 22526479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 33396877 - 33396848
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  33396877 cccccaaaactctctaaaatctcataacaa 33396848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 470
Target Start/End: Original strand, 15071552 - 15071580
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaa 470  Q
    |||||||||||||||||||||||||||||    
T  15071552 ccccaaaactctctaaaatctcataacaa 15071580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 28648245 - 28648197
Alignment:
Q  323 tttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||| |||||||| | ||||||||||||||||||||| |||||| ||||    
T  28648245 tttcccttctcttggctttttctcccttttctccaaaattgatcgtacg 28648197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 247 - 371
Target Start/End: Complemental strand, 7780 - 7656
Alignment:
Q  247 gaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctc 346  Q
    |||| |||||||||| |||||||   |||||||||| ||||||||||||||||||||| |||||| || | ||   | || |||||||| | ||||||||    
T  7780 gaatcacaggcttaatagaattgcaagttagtctcacccttaccttaacaatgaaaatcgcagctttctaggttgttctcccttctctttgctttttctc 7681  T
Q  347 ccttttctccaaagttgatcatacg 371  Q
    ||||||||||||| |||||| ||||    
T  7680 ccttttctccaaaattgatcgtacg 7656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 366
Target Start/End: Original strand, 42293 - 42420
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagt 338  Q
    |||||||||||| | ||||||||||  ||||| |||||||| || ||||||||||||||||||||| ||| ||||| | ||   | || |||||||| |     
T  42293 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaacaatgaaaatcgcaactctctaggtgtttctcccttctcttggc 42392  T
Q  339 tttttctcccttttctccaaagttgatc 366  Q
    ||||||||| ||||||||||| ||||||    
T  42393 tttttctcctttttctccaaaattgatc 42420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 78613 - 78515
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| |||||| |||||||||||||| ||||||||| ||||   | || |||||||| | ||||||||||||||||||||| |||||| ||||    
T  78613 gttagtctcacccttactttaacaatgaaaatcgcagctctctatgtgtttctcccttctcttggctttttctcccttttctccaaaattgatcgtacg 78515  T

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Target: scaffold0112 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 23178 - 23103
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctc 314  Q
    |||||||||||| | ||||||||||  ||||| |||||||| || ||||||||||||||||||||| |||||||||    
T  23178 aattatcagaatcataggcttaagaagattgaatgttagtcacacccttaccttaacaatgaaaatcgcagctctc 23103  T

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Target: scaffold0601 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 7577 - 7635
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaa 301  Q
    ||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  7577 atcagaattacagacttaatagaattgaatgttagtctcacccttaccttaacaatgaa 7635  T

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Target: scaffold0530 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 359
Target Start/End: Complemental strand, 266 - 164
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    ||||| |||||||| || |||||||| |||||||||| ||||  |||| ||||| ||| | ||| |||||||||||||| |  |||||||||||||||||    
T  266 cttaatagaattgaatgctagtctcacccttaccttagcaatacaaatcgcagcactctaggtctctttctcttctcttggcattttctcccttttctcc 167  T
Q  357 aaa 359  Q
    |||    
T  166 aaa 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 14838 - 14740
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||||||| ||||| ||||||||| | ||   | || |||||||||| |||||||| |||||||||||| |||||| ||||    
T  14838 gttagtctcacccttaccttaacaataaaaatcgcagctctctaggtgcttctcccttctcttagctttttctctcttttctccaaaattgatcgtacg 14740  T

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Target: scaffold0394 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 365
Target Start/End: Original strand, 13046 - 13172
Alignment:
Q  239 aattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagt 338  Q
    |||||||||||| | ||||||||||  ||||| |||||||| || |||||||||||||||||||||   ||||||| | ||   | || |||||||| |     
T  13046 aattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaacaatgaaaatcctagctctctaggtgcttctcccttctcttggc 13145  T
Q  339 tttttctcccttttctccaaagttgat 365  Q
    ||||||| ||||||||||||| |||||    
T  13146 tttttcttccttttctccaaaattgat 13172  T

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Target: scaffold0149 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 371
Target Start/End: Original strand, 34282 - 34416
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctctta 336  Q
    |||||| ||||||| | || || ||||  ||||| |||||||| || |||||||||||||||||||||||||||| || | ||   | || ||||||||     
T  34282 acaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaacaatgaaaattgcagctttctaggttgttctcccttctcttg 34381  T
Q  337 gttttttctcccttttctccaaagttgatcatacg 371  Q
    | ||||| ||||||||||||||| |||||| ||||    
T  34382 gctttttttcccttttctccaaaattgatcgtacg 34416  T

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Target: scaffold0142 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 17671 - 17757
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | ||   | || |||||||| | |||||||||||||||||||||    
T  17671 gttagtctcacccttaccttaacaatgaaaatcgcagctctctaggtgcttctcccttctcttggctttttctcccttttctccaaa 17757  T

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Target: scaffold0100 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 23727 - 23641
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||| ||| ||||| ||||| ||| | ||| ||| |||||||||| | |||||||||||||||||||||    
T  23727 gttagtctcacccttaccttaataatcaaaatcgcagcactctaggtctcttgctcttctcttggctttttctcccttttctccaaa 23641  T

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Target: scaffold0075 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 359
Target Start/End: Complemental strand, 50774 - 50680
Alignment:
Q  265 aattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||| || |||||||| |||||||||| |||||||||| ||||||||  | |||   |||||||||||| | |||||||||||||||||||||    
T  50774 aattgaatgctagtctcacccttaccttagcaatgaaaatcgcagctctaaaggtcctcttctcttctcttggctttttctcccttttctccaaa 50680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 371
Target Start/End: Original strand, 6136 - 6241
Alignment:
Q  266 attgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaagttgat 365  Q
    ||||| ||||||||||| | ||||||||||||||||||| | ||||||| | ||   | || |||||||| | ||||||||||||||||||||| |||||    
T  6136 attgaatgttagtctcacctttaccttaacaatgaaaatcgtagctctctaggtgcttctcccttctcttggctttttctcccttttctccaaaattgat 6235  T
Q  366 catacg 371  Q
    | ||||    
T  6236 cgtacg 6241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 359
Target Start/End: Complemental strand, 46292 - 46176
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta-acaatgaaaattgcagctctccatgtcactttctcttctcttagtttt 341  Q
    ||||||||||||| ||||| |||||||| || |||||||| |||||||||| |  |||||||| |||| |||| ||||   | || |||||||||| |||    
T  46292 atcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaatatgaaaatcgcag-tctctatgtgcttctcccttctcttagattt 46194  T
Q  342 ttctcccttttctccaaa 359  Q
    ||||||||||||||||||    
T  46193 ttctcccttttctccaaa 46176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Complemental strand, 14644 - 14599
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  14644 ctcttctcttggctttttctcccttttctccaaaattgatcgtacg 14599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 228354 - 228455
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || || ||||| ||||||||||||||||||||| | | |||||   ||| |||||||||||||| | |||||| ||||||||||||    
T  228354 ttaatagaattgaatgctaatctcacccttaccttaacaatgaaaatcgtacctctcttggtctctttctcttctctttgctttttcacccttttctcca 228453  T
Q  358 aa 359  Q
    ||    
T  228454 aa 228455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 470
Target Start/End: Complemental strand, 136349 - 136321
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaa 470  Q
    |||||||||||||||||||||||||||||    
T  136349 ccccaaaactctctaaaatctcataacaa 136321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 371
Target Start/End: Complemental strand, 13787 - 13674
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || |||||||| ||||||||||||||||||||| ||||||||| | ||   | |  |||||||| | |||||||||||||| ||||    
T  13787 ttaatagaattgaatgctagtctcacccttaccttaacaatgaaaatcgcagctctctaagtgcttctgccttctcttggctttttctcccttttttcca 13688  T
Q  358 aagttgatcatacg 371  Q
    || |||||| ||||    
T  13687 aaattgatcgtacg 13674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 1865 - 1779
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||| | | ||||| ||||| ||| | ||| ||| |||||||||| | |||||||||||||||||||||    
T  1865 gttagtctcacccttaccttaatactcaaaatcgcagcactctaggtctcttgctcttctcttggctttttctcccttttctccaaa 1779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 371
Target Start/End: Original strand, 3606 - 3739
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctctta 336  Q
    |||||| ||||||| | || || ||||  ||||| |||||||| || ||||||||||||||||||||| |||||| |  | ||| || ||  |||||||     
T  3606 acaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaacaatgaaaatcgcagct-tttaggtctctctccattctcttg 3704  T
Q  337 gttttttctcccttttctccaaagttgatcatacg 371  Q
    | ||||||||||||||||||||| |||||| ||||    
T  3705 gctttttctcccttttctccaaaattgatcgtacg 3739  T

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Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 20144 - 20230
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||| | | ||||| ||||| ||| | ||| ||| |||||||||| | |||||||||||||||||||||    
T  20144 gttagtctcacccttaccttaatactcaaaatcgcagcactctaggtctcttgctcttctcttggctttttctcccttttctccaaa 20230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 359
Target Start/End: Complemental strand, 17142 - 17040
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaatt-gcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    |||| |||||||| || |||||||| ||||||||||| ||| |||| | |||||||||   ||| ||||||||||||||   ||||||||||||||||||    
T  17142 ttaatagaattgaatgctagtctcacccttaccttaaaaataaaaaatcgcagctctcttggtctctttctcttctcttgactttttctcccttttctcc 17043  T
Q  357 aaa 359  Q
    |||    
T  17042 aaa 17040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 1468 - 1568
Alignment:
Q  258 ttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcca 357  Q
    |||| |||||||| || || ||||| ||||||||||  ||| ||||| |||||||||   ||| |||||||||||||| | |||||||||||||||||||    
T  1468 ttaatagaattgaatgctaatctcacccttaccttag-aatcaaaatcgcagctctcttggtctctttctcttctcttggctttttctcccttttctcca 1566  T
Q  358 aa 359  Q
    ||    
T  1567 aa 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 359
Target Start/End: Original strand, 7502 - 7598
Alignment:
Q  263 agaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||| ||||||||||| ||||||||||  |   ||||| ||||| ||| | ||| ||| |||||||||| | |||||||||||||||||||||    
T  7502 agaattgaatgttagtctcacccttaccttagaataaaaaatcgcagcactctaggtctcttgctcttctcttggctttttctcccttttctccaaa 7598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 359
Target Start/End: Original strand, 14882 - 14978
Alignment:
Q  263 agaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||| ||||||||||| ||||||||||  |   ||||| ||||| ||| | ||| ||| |||||||||| | |||||||||||||||||||||    
T  14882 agaattgaatgttagtctcacccttaccttagaataaaaaatcgcagcactctaggtctcttgctcttctcttggctttttctcccttttctccaaa 14978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 371
Target Start/End: Complemental strand, 25531 - 25396
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcag-ctctccatgtcactttctcttctctt 335  Q
    ||||| ||||||||||||| ||||| |||||||   |||||||||| ||||||||||| ||| ||||| |||| ||||  | |||   ||||||||||||    
T  25531 acaatcatcagaattacagacttaatagaattgtaagttagtctcacccttaccttaaaaattaaaatcgcagcctct-aaggtcctcttctcttctctt 25433  T
Q  336 agttttttctccc-ttttctccaaagttgatcatacg 371  Q
     | |||||||||| ||||||||||| |||||| ||||    
T  25432 ggctttttctccctttttctccaaaattgatcgtacg 25396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 371
Target Start/End: Original strand, 10158 - 10273
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctcc-atgtcactttctcttctcttagttttttctcccttttctc 355  Q
    |||||||  ||||| ||||||||||| ||||||||||  | | ||||| |||||  ||| | ||| ||| |||||||||| | |||||||||||||||||    
T  10158 cttaagattattgaatgttagtctcacccttaccttataactcaaaatcgcagcaatcctaggtctcttgctcttctcttggctttttctcccttttctc 10257  T
Q  356 caaagttgatcatacg 371  Q
    |||| |||||| ||||    
T  10258 caaaattgatcgtacg 10273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 7570 - 7644
Alignment:
Q  237 acaattatcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagct 311  Q
    |||||| ||||||| | || || ||||  ||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  7570 acaattctcagaatcatagactcaagattattgaatgttagtctcacccttaccttaacaatgaaaatcgcagct 7644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 7774 - 7804
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  7774 cccccaaaactctctaaaatctcataacaac 7804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 79555 - 79469
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||  |   ||||| |||||||||   ||| |||||||||||||| | |||||||||||||||||||||    
T  79555 gttagtctcacccttaccttagaatcaaaaatcgcagctctcttggtctctttctcttctcttggctttttctcccttttctccaaa 79469  T

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Target: scaffold0023 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 39230 - 39144
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||| ||||||||||| | | ||||| ||||| | | | ||| ||| |||||||||| | |||||||||||||||||||||    
T  39230 gttagtctcacccttaccttaatactaaaaatcgcagcaccctaggtctcttgctcttctcttggctttttctcccttttctccaaa 39144  T

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Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 95507 - 95536
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  95507 cccccaaaactctctaaaatctcataacaa 95536  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 352
Target Start/End: Original strand, 81192 - 81301
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttt 342  Q
    ||||||||||||| ||||| |||||||| || |||||||| ||||||||||  | |  |||| ||||||||| | |||   |||||||||||| | ||||    
T  81192 atcagaattacagccttaatagaattgaatgctagtctcacccttaccttagaattcgaaatcgcagctctctaggtcctcttctcttctcttggctttt 81291  T
Q  343 tctccctttt 352  Q
    ||||| ||||    
T  81292 tctccatttt 81301  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 335
Target Start/End: Original strand, 64 - 115
Alignment:
Q  284 ccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctctt 335  Q
    |||||||||| |||||||||| |||||| || | ||||||||||||||||||    
T  64 ccttaccttagcaatgaaaatcgcagctttctaggtcactttctcttctctt 115  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 365
Target Start/End: Original strand, 31146 - 31254
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    ||||| |||||||| || |||||||| ||||||||||||||| ||||| ||||||  | | |||  | || ||||| || | ||||||||| ||||||||    
T  31146 cttaatagaattgaatgctagtctcacccttaccttaacaatcaaaatcgcagcttcctaggtctttctcccttctattggctttttctccattttctcc 31245  T
Q  357 aaagttgat 365  Q
    ||| |||||    
T  31246 aaaattgat 31254  T

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Target: scaffold2004 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 84 - 1
Alignment:
Q  263 agaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctc 346  Q
    |||||||| || |||||||| ||||||||||    ||||||| |||||| || | |||||||||||||||||| | ||||||||    
T  84 agaattgaatgctagtctcacccttaccttagagttgaaaatcgcagctttctaggtcactttctcttctcttggctttttctc 1  T

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Target: scaffold0500 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 8336 - 8375
Alignment:
Q  197 tcacttttaacctaattctccaattctcaaaaacaaaacc 236  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  8336 tcacttttaacctaattctcaaattctcaaaaactaaacc 8375  T

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Target: scaffold0145 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 371
Target Start/End: Original strand, 8256 - 8299
Alignment:
Q  328 cttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||    
T  8256 cttctcttggttttttctcccttttctccaaaattgatcgtacg 8299  T

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Target: scaffold0914 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 2646 - 2700
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    |||||||||| || |||||||  ||||| ||||||||||| ||||||||||||||    
T  2646 atcagaattatagacttaagaagattgaatgttagtctcacccttaccttaacaa 2700  T

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Target: scaffold0628 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 311
Target Start/End: Complemental strand, 2046 - 2008
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagct 311  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  2046 gttagtctcacccttaccttaacaatgaaaatcgcagct 2008  T

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Target: scaffold0371 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 16269 - 16303
Alignment:
Q  325 tctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||||||| |||||||||||||||||||||    
T  16269 tctcttctcttagctttttctcccttttctccaaa 16303  T

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Target: scaffold0347 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 9803 - 9857
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttaccttaacaa 297  Q
    |||||||| | ||||||||||  ||||| ||||||||||| ||||||||||||||    
T  9803 atcagaatcataggcttaagaagattgaatgttagtctcacccttaccttaacaa 9857  T

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Target: scaffold0273 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 359
Target Start/End: Complemental strand, 8676 - 8574
Alignment:
Q  257 cttaagagaattgattgttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctcc 356  Q
    ||||| |||||||| || |||||||| ||||||||||  |   ||||| ||||| ||| | ||| ||| ||||||| || | ||||||||||||||||||    
T  8676 cttaatagaattgaatgctagtctcacccttaccttagaatcaaaaatcgcagcactctaggtctcttgctcttcttttggctttttctcccttttctcc 8577  T
Q  357 aaa 359  Q
    |||    
T  8576 aaa 8574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 1967 - 2001
Alignment:
Q  325 tctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||||||| |||||||||||||||||||||    
T  1967 tctcttctcttagctttttctcccttttctccaaa 2001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Complemental strand, 332 - 302
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  332 cccccaaaactctctaaaatctcataacaac 302  T

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Target: scaffold0081 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 294
Target Start/End: Complemental strand, 4041 - 4003
Alignment:
Q  256 gcttaagagaattgattgttagtctcatccttaccttaa 294  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  4041 gcttaagagaattgaatgttagtctcacccttaccttaa 4003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 185261 - 185291
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaac 471  Q
    |||||||||||||||||||||||||||||||    
T  185261 cccccaaaactctctaaaatctcataacaac 185291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 333239 - 333289
Alignment:
Q  243 atcagaattacaggcttaagagaattgattgttagtctcatccttacctta 293  Q
    |||||||||| || ||||||| |||||| ||||||||||| ||||||||||    
T  333239 atcagaattatagacttaagaaaattgaatgttagtctcacccttacctta 333289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 79142 - 79178
Alignment:
Q  323 tttctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||||||| | |||||||||||||||||||||    
T  79142 tttctcttctcttggctttttctcccttttctccaaa 79178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Complemental strand, 2248 - 2203
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  2248 ctcttctcttggctttttctcccttttctccaaaattgatcgtacg 2203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 7438 - 7523
Alignment:
Q  274 ttagtctcatccttaccttaacaatgaaaattgcagctctccatgtcactttctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||| ||||||||||| | | ||||| ||||| ||| | ||| ||| |||||||||| | |||| |||||||||| |||||    
T  7438 ttagtctcacccttaccttaatactcaaaatcgcagcactctaggtctcttgctcttctcttggcttttactcccttttcaccaaa 7523  T

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Target: scaffold0521 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 8743 - 8714
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  8743 cccccaaaactctctaaaatctcataacaa 8714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 217 - 246
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  217 cccccaaaactctctaaaatctcataacaa 246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 14490 - 14519
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  14490 cccccaaaactctctaaaatctcataacaa 14519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 2302 - 2273
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  2302 cccccaaaactctctaaaatctcataacaa 2273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 359
Target Start/End: Original strand, 21355 - 21388
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaa 359  Q
    |||||||||||| |||||||||||||||||||||    
T  21355 ctcttctcttagctttttctcccttttctccaaa 21388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 2770 - 2741
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  2770 cccccaaaactctctaaaatctcataacaa 2741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Original strand, 1295 - 1340
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  1295 ctcttctcttggctttttctcccttttctccaaaattgatcgtacg 1340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 19369 - 19398
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  19369 cccccaaaactctctaaaatctcataacaa 19398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Complemental strand, 17096 - 17067
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaac 471  Q
    ||||||||||||||||||||||||||||||    
T  17096 ccccaaaactctctaaaatctcataacaac 17067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 15047 - 15076
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  15047 cccccaaaactctctaaaatctcataacaa 15076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 474
Target Start/End: Original strand, 5549 - 5582
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaacacc 474  Q
    |||||||||||||||||||||||| |||||||||    
T  5549 cccccaaaactctctaaaatctcaaaacaacacc 5582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 474
Target Start/End: Original strand, 13131 - 13164
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaacacc 474  Q
    |||||||||||||||||||||||| |||||||||    
T  13131 cccccaaaactctctaaaatctcaaaacaacacc 13164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 474
Target Start/End: Original strand, 23083 - 23116
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaacacc 474  Q
    |||||||||||||||||||||||| |||||||||    
T  23083 cccccaaaactctctaaaatctcaaaacaacacc 23116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Complemental strand, 27977 - 27932
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  27977 ctcttctcttggctttttctcccttttctccaaaattgatcgtacg 27932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Original strand, 14152 - 14197
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  14152 ctcttctcttggctttttctcccttttctccaaaattgatcgtacg 14197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 29089 - 29118
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  29089 cccccaaaactctctaaaatctcataacaa 29118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Original strand, 11097 - 11142
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| ||||||||||||| |||||||||  ||||||||||    
T  11097 ctcttctcttggttttttctccctcttctccaaaactgatcatacg 11142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 32916 - 32953
Alignment:
Q  273 gttagtctcatccttaccttaacaatgaaaattgcagc 310  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  32916 gttagtctcacccttaccttaacaatgaaaatcgcagc 32953  T

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Target: scaffold0150; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 470
Target Start/End: Original strand, 30937 - 30965
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaa 470  Q
    |||||||||||||||||||||||||||||    
T  30937 ccccaaaactctctaaaatctcataacaa 30965  T

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Target: scaffold0134 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 38918 - 38947
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  38918 cccccaaaactctctaaaatctcataacaa 38947  T

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Target: scaffold0132 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Original strand, 29474 - 29503
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaac 471  Q
    ||||||||||||||||||||||||||||||    
T  29474 ccccaaaactctctaaaatctcataacaac 29503  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Complemental strand, 32662 - 32617
Alignment:
Q  326 ctcttctcttagttttttctcccttttctccaaagttgatcatacg 371  Q
    |||||||||| | ||||||||||||||||||||| |||||| ||||    
T  32662 ctcttctcttggctttttctcccttttctccaaaattgatcgtacg 32617  T

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Target: scaffold0122; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 33688 - 33659
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  33688 cccccaaaactctctaaaatctcataacaa 33659  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 41495 - 41524
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  41495 cccccaaaactctctaaaatctcataacaa 41524  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Complemental strand, 56075 - 56046
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  56075 cccccaaaactctctaaaatctcataacaa 56046  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Original strand, 12386 - 12415
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaac 471  Q
    ||||||||||||||||||||||||||||||    
T  12386 ccccaaaactctctaaaatctcataacaac 12415  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000002; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 135306 - 135335
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  135306 cccccaaaactctctaaaatctcataacaa 135335  T

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Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 137775 - 137804
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  137775 cccccaaaactctctaaaatctcataacaa 137804  T

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Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 140244 - 140273
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  140244 cccccaaaactctctaaaatctcataacaa 140273  T

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Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 142713 - 142742
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  142713 cccccaaaactctctaaaatctcataacaa 142742  T

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Target: scaffold0028; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 470
Target Start/End: Original strand, 145182 - 145211
Alignment:
Q  441 cccccaaaactctctaaaatctcataacaa 470  Q
    ||||||||||||||||||||||||||||||    
T  145182 cccccaaaactctctaaaatctcataacaa 145211  T

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Target: scaffold0231 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 11354 - 11390
Alignment:
Q  323 tttctcttctcttagttttttctcccttttctccaaa 359  Q
    ||||||||||||| | |||||||||||||||||||||    
T  11354 tttctcttctcttggctttttctcccttttctccaaa 11390  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 470
Target Start/End: Complemental strand, 40898 - 40870
Alignment:
Q  442 ccccaaaactctctaaaatctcataacaa 470  Q
    |||||||||||||||||||||||||||||    
T  40898 ccccaaaactctctaaaatctcataacaa 40870  T

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