View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9772_low_74 (Length: 233)
Name: NF9772_low_74
Description: NF9772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9772_low_74 |
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Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 216
Target Start/End: Original strand, 2624568 - 2624767
Alignment:
| Q |
17 |
aggtagcaattttttctatatagatatttgtcgcaattgaattgtgatcttttatattgttgagagttaccgttaaataaaaagagtatgtaaagttaat |
116 |
Q |
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| T |
2624568 |
aggtagcaattttttctatatagatatttgtcgcaattgaattgtgatcttttatattgttgagagttaccgttaaataaaaagagtatgtaaagttaat |
2624667 |
T |
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| Q |
117 |
caactgattaggtttgttagaggtagttaggctaaatcacagctgaacttggcattttcaacaagcttcatatatatacttgcttgcagaagatgccatg |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
2624668 |
caactgattaggtttgttagaggtagttaggctaaatcacaactgaacttggcattttcaacaagcttcatatatatactcacttgcagaagatgccatg |
2624767 |
T |
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