View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9773_high_15 (Length: 241)
Name: NF9773_high_15
Description: NF9773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9773_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 25135269 - 25135047
Alignment:
| Q |
1 |
atgatgagggaagtgtatatttgaatcaaggttttaaatcatgaacaaggttactttgcagtcacgtcgtggtttttgtcattgcaaaaagtttctgttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25135269 |
atgatgagggaagtgtatatttgaatcaaggttttaaatcatgaacaaggttactttgcagtcacgtcgtggtttttgtcattgcaaaaagtttctgttg |
25135170 |
T |
|
| Q |
101 |
cttcagtctcgtcgtacctatgagttatatacttctaaacaaaattgtttcaggaatttggaagtgcttgttgtgataacaatgaacttacctagatcca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
25135169 |
cttcagtctcgtcgtacctatgagttatatacttctaaacaaagttgtttcaggaatttggaagtgcttgttgtgataacaatgaatttacctagatcca |
25135070 |
T |
|
| Q |
201 |
catgcaaaacaagccacgcagtg |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
25135069 |
catgcaaaacaagccacgcagtg |
25135047 |
T |
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