View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9773_low_36 (Length: 229)
Name: NF9773_low_36
Description: NF9773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9773_low_36 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 25135604 - 25135373
Alignment:
| Q |
1 |
gtaaaaattctcctcaccttcttcatgttcctacgacaaacaggacatatacctgctgcctcggctatcctgcatagataaggttgg---tacatcattc |
97 |
Q |
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| T |
25135604 |
gtaaaaattctcctcaccttcttcatgttcctacgacaaacaggacatatacctgctgcctcggctatcctgcatagataaggttgggcatacatcattc |
25135505 |
T |
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| Q |
98 |
accataaaagcatcaggcaccataatgcattatcatgtatcatgtatgtcactgaaaatgtaatttgcagagtaaaggtatcaaattcatcaacttgcaa |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |
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| T |
25135504 |
accataaaagcatcaggcaccataatgcattatcatgtatcatgtatgtcactgaaaatgtaatttgtagagtaaaggtatcgaattcatcaacttgcaa |
25135405 |
T |
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| Q |
198 |
atgtcaaaatcatacaagaggaatcaaattct |
229 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
25135404 |
atgtcaaaatcatacaagaggaatcaaattct |
25135373 |
T |
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