View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9773_low_38 (Length: 214)
Name: NF9773_low_38
Description: NF9773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9773_low_38 |
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Alignment Details
Target: chr5 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 17 - 194
Target Start/End: Original strand, 13888854 - 13889031
Alignment:
| Q |
17 |
agtagcaatgtccctctagtccctggtctcctttcaatattctcatcttaccgttatcgagtgtgcatttcaatgttaggtacatggttgataaagttgg |
116 |
Q |
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| T |
13888854 |
agtagcaatgtccctctagtccctggtctcctttcaacattctcatcttaccgttatcgagtgtgcatttcaatgttaggtacatggttgataaagttgg |
13888953 |
T |
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| Q |
117 |
catatagcattgagagagttggacgacctgcgatgatgttatatgatgaaaggggagcgtccaccaagctttggcatc |
194 |
Q |
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| T |
13888954 |
catatagcattgagagagttggaagacctgcgatgatgttatataatgaaaggggagcgtccaccaagctttggcatc |
13889031 |
T |
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