View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9775_low_15 (Length: 236)

Name: NF9775_low_15
Description: NF9775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9775_low_15
NF9775_low_15
[»] chr8 (33 HSPs)
chr8 (13-236)||(13985239-13985461)
chr8 (77-236)||(13985972-13986132)
chr8 (13-78)||(34256036-34256101)
chr8 (1-68)||(27827668-27827736)
chr8 (189-236)||(33839081-33839128)
chr8 (13-68)||(18811404-18811459)
chr8 (13-68)||(31577876-31577931)
chr8 (13-78)||(4732231-4732296)
chr8 (13-78)||(5591459-5591523)
chr8 (183-236)||(11701116-11701169)
chr8 (13-68)||(15069263-15069318)
chr8 (13-68)||(21481192-21481247)
chr8 (13-68)||(43080298-43080353)
chr8 (12-54)||(41383348-41383390)
chr8 (197-236)||(9021266-9021306)
chr8 (197-236)||(16752681-16752721)
chr8 (197-236)||(16757426-16757466)
chr8 (197-236)||(17799583-17799623)
chr8 (197-236)||(21033853-21033893)
chr8 (111-151)||(27911071-27911111)
chr8 (111-151)||(27957490-27957530)
chr8 (197-236)||(28327891-28327931)
chr8 (197-236)||(28332614-28332654)
chr8 (197-236)||(28895485-28895525)
chr8 (13-56)||(18105628-18105671)
chr8 (197-236)||(44720981-44721020)
chr8 (197-234)||(4812648-4812686)
chr8 (197-236)||(590777-590817)
chr8 (111-150)||(18812949-18812989)
chr8 (197-236)||(23179720-23179760)
chr8 (197-236)||(29554944-29554984)
chr8 (197-236)||(30423195-30423235)
chr8 (197-236)||(33032637-33032677)
[»] chr1 (40 HSPs)
chr1 (102-236)||(49959033-49959168)
chr1 (13-78)||(31657777-31657842)
chr1 (13-68)||(27338716-27338771)
chr1 (13-68)||(51750678-51750733)
chr1 (13-68)||(51758175-51758230)
chr1 (13-78)||(16456290-16456356)
chr1 (13-63)||(31737064-31737114)
chr1 (13-63)||(50078382-50078432)
chr1 (13-78)||(3157236-3157301)
chr1 (13-78)||(50168879-50168944)
chr1 (184-236)||(14353034-14353086)
chr1 (110-154)||(32261037-32261081)
chr1 (13-68)||(6996225-6996280)
chr1 (13-68)||(16226809-16226864)
chr1 (13-68)||(47178003-47178058)
chr1 (14-68)||(20300773-20300827)
chr1 (13-78)||(13784837-13784902)
chr1 (13-78)||(28222951-28223016)
chr1 (197-236)||(2232580-2232620)
chr1 (102-154)||(3805822-3805874)
chr1 (197-236)||(4144842-4144882)
chr1 (110-154)||(27916499-27916543)
chr1 (110-154)||(31047751-31047794)
chr1 (13-68)||(3805721-3805776)
chr1 (197-236)||(6115264-6115302)
chr1 (179-234)||(8213690-8213745)
chr1 (13-68)||(8348648-8348703)
chr1 (13-68)||(28203282-28203337)
chr1 (13-60)||(31424613-31424660)
chr1 (96-154)||(26332794-26332851)
chr1 (111-151)||(2949471-2949512)
chr1 (121-154)||(14352970-14353003)
chr1 (197-236)||(2393441-2393481)
chr1 (197-236)||(2401380-2401420)
chr1 (111-151)||(8347510-8347550)
chr1 (197-236)||(9521698-9521738)
chr1 (197-236)||(9526449-9526489)
chr1 (13-77)||(13127309-13127373)
chr1 (197-236)||(25134054-25134094)
chr1 (196-236)||(30738792-30738831)
[»] chr7 (50 HSPs)
chr7 (16-78)||(6570563-6570625)
chr7 (13-78)||(18391701-18391766)
chr7 (110-154)||(11081521-11081565)
chr7 (13-68)||(36100-36155)
chr7 (13-68)||(21678709-21678764)
chr7 (13-68)||(24749237-24749292)
chr7 (13-68)||(38394636-38394691)
chr7 (13-63)||(24816951-24817001)
chr7 (13-78)||(6594063-6594128)
chr7 (13-78)||(47675667-47675732)
chr7 (196-236)||(12310175-12310215)
chr7 (13-77)||(13290073-13290137)
chr7 (13-68)||(1048872-1048927)
chr7 (1-63)||(4295529-4295592)
chr7 (13-68)||(7351234-7351289)
chr7 (13-68)||(28486215-28486270)
chr7 (16-77)||(6047137-6047198)
chr7 (110-151)||(6048884-6048925)
chr7 (179-236)||(10691183-10691240)
chr7 (197-236)||(3320209-3320249)
chr7 (197-236)||(3324957-3324997)
chr7 (196-236)||(6048960-6049000)
chr7 (197-236)||(7069763-7069803)
chr7 (197-236)||(7074770-7074810)
chr7 (197-236)||(15541154-15541194)
chr7 (197-236)||(21369625-21369665)
chr7 (197-236)||(25351336-25351376)
chr7 (197-236)||(25357030-25357070)
chr7 (197-236)||(25405376-25405416)
chr7 (197-236)||(25410113-25410153)
chr7 (197-236)||(42006646-42006686)
chr7 (16-68)||(44725228-44725280)
chr7 (13-68)||(7094044-7094099)
chr7 (13-68)||(22135453-22135508)
chr7 (107-154)||(30246869-30246915)
chr7 (13-68)||(31159272-31159326)
chr7 (13-68)||(40550480-40550535)
chr7 (23-78)||(48489988-48490043)
chr7 (13-63)||(7471569-7471619)
chr7 (14-63)||(7189160-7189209)
chr7 (111-151)||(20137347-20137388)
chr7 (197-236)||(2120882-2120922)
chr7 (197-236)||(7464677-7464717)
chr7 (197-236)||(8378663-8378703)
chr7 (196-236)||(16297184-16297223)
chr7 (196-236)||(26210630-26210670)
chr7 (197-236)||(30246953-30246993)
chr7 (197-236)||(44016820-44016860)
chr7 (197-236)||(44144025-44144065)
chr7 (197-236)||(44512684-44512724)
[»] chr3 (55 HSPs)
chr3 (102-230)||(11066556-11066685)
chr3 (13-78)||(6717086-6717151)
chr3 (13-78)||(7762844-7762909)
chr3 (13-78)||(37407262-37407327)
chr3 (102-154)||(11072912-11072964)
chr3 (13-68)||(5192270-5192325)
chr3 (13-68)||(11168721-11168776)
chr3 (14-77)||(23199669-23199732)
chr3 (106-149)||(53973831-53973874)
chr3 (13-67)||(53917258-53917312)
chr3 (13-78)||(9635653-9635718)
chr3 (13-78)||(10209774-10209839)
chr3 (13-78)||(32891663-32891728)
chr3 (14-78)||(29811443-29811507)
chr3 (13-68)||(3315302-3315357)
chr3 (13-68)||(5898029-5898084)
chr3 (13-68)||(42990919-42990974)
chr3 (1-78)||(5259852-5259930)
chr3 (15-68)||(1620057-1620110)
chr3 (13-78)||(4600249-4600314)
chr3 (13-78)||(10059040-10059105)
chr3 (13-78)||(22834538-22834602)
chr3 (13-78)||(23409861-23409926)
chr3 (102-154)||(23941723-23941773)
chr3 (15-68)||(25634498-25634551)
chr3 (13-68)||(43226697-43226752)
chr3 (13-78)||(10056818-10056883)
chr3 (13-78)||(10061262-10061327)
chr3 (13-78)||(10063484-10063549)
chr3 (13-78)||(10065706-10065771)
chr3 (110-151)||(23637006-23637047)
chr3 (16-77)||(27421261-27421322)
chr3 (197-236)||(6303293-6303333)
chr3 (110-154)||(7768553-7768597)
chr3 (197-236)||(10094233-10094273)
chr3 (197-236)||(10100250-10100290)
chr3 (197-236)||(10201113-10201153)
chr3 (197-236)||(16462186-16462226)
chr3 (197-236)||(22626143-22626183)
chr3 (197-236)||(27544256-27544296)
chr3 (196-236)||(31021302-31021342)
chr3 (197-236)||(47883041-47883081)
chr3 (13-68)||(456527-456582)
chr3 (197-234)||(5858529-5858567)
chr3 (14-68)||(15830780-15830834)
chr3 (14-68)||(31116334-31116388)
chr3 (110-151)||(23633439-23633480)
chr3 (196-236)||(7768631-7768670)
chr3 (197-236)||(10208159-10208199)
chr3 (13-57)||(18098764-18098808)
chr3 (197-236)||(20031477-20031517)
chr3 (111-150)||(28137532-28137572)
chr3 (197-236)||(29914112-29914152)
chr3 (197-236)||(47878330-47878370)
chr3 (197-236)||(54193209-54193249)
[»] chr5 (40 HSPs)
chr5 (99-236)||(35430160-35430298)
chr5 (13-78)||(29720948-29721013)
chr5 (13-78)||(534332-534397)
chr5 (13-78)||(9788751-9788816)
chr5 (13-78)||(26171340-26171405)
chr5 (102-154)||(5777836-5777887)
chr5 (102-236)||(13294677-13294812)
chr5 (197-236)||(16093450-16093489)
chr5 (13-63)||(20043626-20043676)
chr5 (13-78)||(16545010-16545075)
chr5 (13-78)||(40380689-40380754)
chr5 (13-78)||(42427961-42428026)
chr5 (110-154)||(29748351-29748395)
chr5 (13-68)||(658659-658714)
chr5 (13-68)||(6745709-6745764)
chr5 (13-68)||(27911073-27911128)
chr5 (13-68)||(31543374-31543429)
chr5 (13-68)||(34479002-34479057)
chr5 (13-63)||(25806102-25806152)
chr5 (109-154)||(2144797-2144842)
chr5 (197-236)||(1170794-1170834)
chr5 (197-236)||(1240411-1240451)
chr5 (197-236)||(2298160-2298200)
chr5 (197-236)||(35385611-35385651)
chr5 (13-68)||(10750339-10750394)
chr5 (13-68)||(15356432-15356487)
chr5 (13-68)||(18467325-18467380)
chr5 (13-68)||(23665687-23665742)
chr5 (102-236)||(32520424-32520557)
chr5 (110-143)||(15225015-15225048)
chr5 (13-62)||(33790857-33790906)
chr5 (196-236)||(2144724-2144764)
chr5 (111-150)||(10586842-10586882)
chr5 (197-236)||(10627347-10627387)
chr5 (197-236)||(17841408-17841448)
chr5 (197-236)||(22672817-22672857)
chr5 (197-236)||(25452478-25452518)
chr5 (197-236)||(28786387-28786427)
chr5 (197-236)||(31782616-31782656)
chr5 (196-236)||(34033729-34033769)
[»] chr6 (37 HSPs)
chr6 (13-78)||(5408599-5408664)
chr6 (13-78)||(5412924-5412989)
chr6 (13-68)||(3631526-3631581)
chr6 (13-77)||(11137212-11137276)
chr6 (13-77)||(25463039-25463103)
chr6 (121-236)||(3833315-3833430)
chr6 (13-68)||(26067978-26068033)
chr6 (13-68)||(33309530-33309585)
chr6 (13-78)||(12157892-12157957)
chr6 (13-68)||(26932146-26932201)
chr6 (116-154)||(17904594-17904632)
chr6 (13-78)||(16553249-16553314)
chr6 (13-78)||(16629805-16629870)
chr6 (13-78)||(34165457-34165522)
chr6 (197-236)||(3577673-3577713)
chr6 (197-236)||(13878710-13878750)
chr6 (197-236)||(13883458-13883498)
chr6 (197-236)||(16785902-16785942)
chr6 (197-236)||(26887383-26887423)
chr6 (197-236)||(31248873-31248913)
chr6 (197-236)||(35201485-35201525)
chr6 (13-52)||(4567488-4567527)
chr6 (179-236)||(7542543-7542599)
chr6 (196-233)||(11138422-11138459)
chr6 (16-77)||(12911132-12911193)
chr6 (111-151)||(17852577-17852618)
chr6 (111-151)||(26065021-26065062)
chr6 (111-151)||(26084990-26085031)
chr6 (109-142)||(30443335-30443368)
chr6 (13-68)||(3395039-3395092)
chr6 (110-154)||(11138339-11138383)
chr6 (197-236)||(13467622-13467662)
chr6 (197-236)||(17036038-17036078)
chr6 (197-236)||(17695010-17695050)
chr6 (197-236)||(19702021-19702061)
chr6 (196-236)||(20526921-20526960)
chr6 (197-236)||(33215810-33215850)
[»] chr2 (41 HSPs)
chr2 (102-151)||(41304627-41304676)
chr2 (102-154)||(41303276-41303328)
chr2 (185-236)||(17921742-17921793)
chr2 (14-68)||(21520277-21520331)
chr2 (13-68)||(19503919-19503974)
chr2 (17-68)||(22405513-22405564)
chr2 (13-68)||(36560724-36560779)
chr2 (13-63)||(6263742-6263792)
chr2 (96-154)||(39287174-39287231)
chr2 (179-232)||(7502957-7503010)
chr2 (14-68)||(35217553-35217607)
chr2 (195-236)||(10942672-10942713)
chr2 (195-236)||(10948541-10948582)
chr2 (179-236)||(30720772-30720829)
chr2 (197-236)||(17462419-17462459)
chr2 (197-236)||(20050181-20050221)
chr2 (197-236)||(20054924-20054964)
chr2 (197-236)||(22712675-22712715)
chr2 (197-236)||(22717384-22717424)
chr2 (197-236)||(28458988-28459028)
chr2 (197-236)||(39680028-39680068)
chr2 (197-236)||(39686966-39687006)
chr2 (197-236)||(45567392-45567432)
chr2 (181-236)||(15693943-15693998)
chr2 (169-236)||(34575269-34575336)
chr2 (39-77)||(34574732-34574770)
chr2 (110-151)||(20146844-20146885)
chr2 (111-151)||(31733003-31733044)
chr2 (13-78)||(42019408-42019473)
chr2 (111-151)||(42452759-42452800)
chr2 (197-236)||(2736188-2736228)
chr2 (197-236)||(2740924-2740964)
chr2 (102-154)||(7502853-7502904)
chr2 (111-151)||(11578343-11578383)
chr2 (197-236)||(17932617-17932657)
chr2 (197-236)||(17943520-17943560)
chr2 (197-236)||(27517798-27517838)
chr2 (197-236)||(30478977-30479017)
chr2 (197-236)||(33674564-33674604)
chr2 (197-236)||(38190980-38191020)
chr2 (110-154)||(43139355-43139399)
[»] scaffold0008 (1 HSPs)
scaffold0008 (77-236)||(57590-57749)
[»] chr4 (47 HSPs)
chr4 (13-78)||(5136665-5136730)
chr4 (13-68)||(16933731-16933786)
chr4 (13-68)||(22134200-22134255)
chr4 (13-68)||(47563450-47563505)
chr4 (13-67)||(8393992-8394046)
chr4 (13-75)||(52094895-52094957)
chr4 (13-74)||(5872388-5872449)
chr4 (13-78)||(7123281-7123346)
chr4 (102-151)||(54906622-54906671)
chr4 (13-77)||(18537078-18537142)
chr4 (13-61)||(46146943-46146991)
chr4 (13-68)||(22782320-22782375)
chr4 (13-63)||(22802325-22802375)
chr4 (13-63)||(36378979-36379029)
chr4 (13-78)||(12743458-12743523)
chr4 (197-236)||(7050416-7050456)
chr4 (110-154)||(9022361-9022405)
chr4 (110-154)||(10112926-10112970)
chr4 (197-236)||(11853532-11853572)
chr4 (110-154)||(52043614-52043658)
chr4 (197-236)||(55822248-55822288)
chr4 (108-154)||(9863762-9863809)
chr4 (13-68)||(11008151-11008206)
chr4 (17-68)||(12395442-12395493)
chr4 (17-68)||(12400404-12400455)
chr4 (13-68)||(14789016-14789071)
chr4 (13-68)||(22046298-22046353)
chr4 (13-68)||(36921081-36921136)
chr4 (13-62)||(9224900-9224949)
chr4 (111-151)||(22801100-22801141)
chr4 (109-154)||(29609678-29609723)
chr4 (111-151)||(56030498-56030539)
chr4 (197-236)||(4570077-4570117)
chr4 (197-236)||(4884857-4884897)
chr4 (197-236)||(8529250-8529290)
chr4 (111-151)||(15032775-15032815)
chr4 (197-236)||(15831124-15831164)
chr4 (197-236)||(16185995-16186035)
chr4 (197-236)||(16489332-16489372)
chr4 (197-236)||(16689099-16689139)
chr4 (197-236)||(18586949-18586989)
chr4 (111-151)||(19322751-19322791)
chr4 (197-236)||(25699732-25699772)
chr4 (34-78)||(26558303-26558347)
chr4 (110-154)||(28453741-28453785)
chr4 (197-236)||(31300407-31300447)
chr4 (197-236)||(36771379-36771419)
[»] scaffold1899 (1 HSPs)
scaffold1899 (13-68)||(265-320)
[»] scaffold0004 (2 HSPs)
scaffold0004 (13-63)||(80507-80557)
scaffold0004 (197-236)||(188401-188441)
[»] scaffold0016 (1 HSPs)
scaffold0016 (13-78)||(115176-115241)
[»] scaffold0127 (1 HSPs)
scaffold0127 (13-68)||(12458-12513)
[»] scaffold0131 (1 HSPs)
scaffold0131 (197-236)||(31124-31164)
[»] scaffold0025 (1 HSPs)
scaffold0025 (16-68)||(73100-73152)
[»] scaffold0006 (1 HSPs)
scaffold0006 (197-236)||(224802-224842)
[»] scaffold0140 (1 HSPs)
scaffold0140 (13-68)||(22767-22822)
[»] scaffold0011 (1 HSPs)
scaffold0011 (13-68)||(34191-34246)
[»] scaffold0005 (1 HSPs)
scaffold0005 (13-68)||(50659-50714)
[»] scaffold0468 (1 HSPs)
scaffold0468 (111-151)||(1870-1910)
[»] scaffold0256 (1 HSPs)
scaffold0256 (197-236)||(16308-16348)


Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 236
Target Start/End: Complemental strand, 13985461 - 13985239
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtcttgtatcaattcaaatatgagatagagtagaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13985461 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtcttgtatcaattcaaatatgagatagagtagaaaa 13985362  T
Q  113 acaagggtttagaagccaacaacaaaactagagtttgtagagnnnnnnnnggaaataaacattatagttgggattaaatcaccattgattcaccttgaaa 212  Q
    |||| |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13985361 acaa-ggtttagaagccaacaacaaaactagagtttgtagagttttttttggaaataaacattatagttgggattaaatcaccattgattcaccttgaaa 13985263  T
Q  213 aaacactattaggattgagtctct 236  Q
    ||||||||||||||||||||||||    
T  13985262 aaacactattaggattgagtctct 13985239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 13986132 - 13985972
Alignment:
Q  77 tcttgtatcaattcaaatatgagatagagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag-nnnnnnnnggaaataaacatt 175  Q
    |||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||         ||||| |||||||    
T  13986132 tcttgtatcagttgaaatatgagagagagtagaaaaacaagggtttagaagtcaacaacaaaactagaatttgtagagttttctcttggaaacaaacatt 13986033  T
Q  176 atagttgggattaaatcaccattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |   |||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  13986032 aggattgggattgaatcaccattgattcaccttggagaaacactattaggattgagactct 13985972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 34256101 - 34256036
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| |||||||||    
T  34256101 gagatggtggacaaggctatgagtgccattgtcttgtgcctcggggacaaagttttgagggatgtc 34256036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27827668 - 27827736
Alignment:
Q  1 agtggagaag-cagagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||| | ||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  27827668 agtggagaagaccgagatggtggacaaggctaggagtgccattgtcttgtgcctcggggataaagtttt 27827736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 33839128 - 33839081
Alignment:
Q  189 aatcaccattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33839128 aatcaccattgattcaccttgaagaaacactattaggattgagtctct 33839081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 18811404 - 18811459
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||| ||||    
T  18811404 gagatggtggacaaggcctggagtgtcattgtcttgtgcctcggggataaagtttt 18811459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 31577931 - 31577876
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||| ||||    
T  31577931 gagatggtggacaaggccagaagtgtcattgtcttgtgcctcggggataaagtttt 31577876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 4732231 - 4732296
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||| || ||| |||| |||||||||    
T  4732231 gagattgtggacaaggctaggagtgtcattgtcatgtgcctcggtgacaaagttttgagggatgtc 4732296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 5591459 - 5591523
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||| |||||| |||| |||||||||    
T  5591459 gagatggtggaca-ggctaggagtgccattgtcttgtgcctcggtgataaagttttgagggatgtc 5591523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 11701169 - 11701116
Alignment:
Q  183 ggattaaatcaccattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  11701169 ggattgaatcaccattgattcaccttgaagaaacattattagaattgagtctct 11701116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 15069263 - 15069318
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||| ||||||||||||| ||||    
T  15069263 gagatggtggacaaggccaggagtgccattgtcttgttcctcggggataaagtttt 15069318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 21481192 - 21481247
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||| |||||| ||||||| |||||| ||||||||||| |||||||||||    
T  21481192 gagatggtgggcaaggccaagagtgccattgttttgtgcctcggagataaattttt 21481247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 43080298 - 43080353
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| |||||||||||||||||| |||||| ||||    
T  43080298 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggagataaagtttt 43080353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 41383348 - 41383390
Alignment:
Q  12 agagatggtggacaaggctaagagtgtcattgtcttgtgcctc 54  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  41383348 agagatggtggacaaggccaggagtgtcattgtcttgtgcctc 41383390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 9021306 - 9021266
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  9021306 ttgattcaccttgaacaaaacactattaggattgagtctct 9021266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 16752721 - 16752681
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  16752721 ttgattcaccttgaacaaaacactattaggattgagtctct 16752681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 16757466 - 16757426
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  16757466 ttgattcaccttgaacaaaacactattaggattgagtctct 16757426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 17799623 - 17799583
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  17799623 ttgattcaccttgaacaaaacactattaggattgagtctct 17799583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 21033853 - 21033893
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  21033853 ttgattcaccttgaacaaaacactattaggattgagtctct 21033893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 27911071 - 27911111
Alignment:
Q  111 aaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  27911071 aaacaagggtttagaaggcaacaacaaaactagggtttgta 27911111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 27957490 - 27957530
Alignment:
Q  111 aaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  27957490 aaacaagggtttagaaggcaacaacaaaactagggtttgta 27957530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 28327891 - 28327931
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  28327891 ttgattcaccttgaacaaaacactattaggattgagtctct 28327931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 28332614 - 28332654
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  28332614 ttgattcaccttgaacaaaacactattaggattgagtctct 28332654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 28895485 - 28895525
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  28895485 ttgattcaccttgaacaaaacactattaggattgagtctct 28895525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 18105671 - 18105628
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcgg 56  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||    
T  18105671 gagatggtggacaaggctaggagtgtcattgtcttctacctcgg 18105628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 44720981 - 44721020
Alignment:
Q  197 ttgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  44720981 ttgattcaccttgggaaaacactattaggattgagtctct 44721020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 4812686 - 4812648
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtct 234  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  4812686 ttgattcaccttgaacaaaacactattaggattgagtct 4812648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 590777 - 590817
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  590777 ttgattcaccttgaacaaagcactattaggattgagtctct 590817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 18812949 - 18812989
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgt 150  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  18812949 aaacaagggtttagaaaggcaacaacaaaactagagtttgt 18812989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 23179760 - 23179720
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  23179760 ttgattcaccttgaacaaagcactattaggattgagtctct 23179720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 29554984 - 29554944
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  29554984 ttgattcaccttgaacaaagcactattaggattgagtctct 29554944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 30423195 - 30423235
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  30423195 ttgattcaccttgaacaaaacacttttaggattgagtctct 30423235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 33032637 - 33032677
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  33032637 ttgattcaccttgaacaaagcactattaggattgagtctct 33032677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 49959033 - 49959168
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag-nnnnnnnnggaaataaacattatagttgggattaaatcaccattga 200  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||||||||||         || || ||||||||  ||||| ||| |||||| |||||    
T  49959033 agagtggaaaaacaagggtttagaagccaacaacaaaactatggtttgtagagaatcctcttggcaacaaacattagggttggaattgaatcactattga 49959132  T
Q  201 ttcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||||||| | |||||||||||||| |||||||||    
T  49959133 ttcaccttggagaaacactattaggaatgagtctct 49959168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 31657777 - 31657842
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| || ||| |||| |||||||||    
T  31657777 gagatggtggacaaggctaggagtgccattgtcttgtgcctcggtgacaaagttttgagggatgtc 31657842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 27338771 - 27338716
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||    
T  27338771 gagatggtggacaaggccaggagtgccattgtcttgtgccttggggataaattttt 27338716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 51750678 - 51750733
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  51750678 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 51750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 51758175 - 51758230
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  51758175 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaaatttt 51758230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 16456290 - 16456356
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgt-cttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||| || |||||||| |||||||||    
T  16456290 gagatggtggacaaggctaggagtgtcattgtgtttgtgcctcggtgacaaatttttgagggatgtc 16456356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 31737114 - 31737064
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  31737114 gagatggtggacaaggccaagagtgccattgtcttgtgcctcgggtataaa 31737064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 50078432 - 50078382
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  50078432 gagatggtggacaaggccaagagtgccattgtcttgtgcctcgggaataaa 50078382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 3157236 - 3157301
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| |  ||| |||| |||||||||    
T  3157236 gagatggtggacaaggctaggagtgccattgtcttgtgcctcggtggcaaagttttgagggatgtc 3157301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 50168944 - 50168879
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| |||||||||||||||| | || ||| |||| |||||||||    
T  50168944 gagatggtggacaaggctaggagtgccattgtcttgtgcctcagtgacaaagttttgagggatgtc 50168879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 14353034 - 14353086
Alignment:
Q  184 gattaaatcaccattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||| ||||||||||||||||||||| | |||||||||||||||| |||||||    
T  14353034 gattgaatcaccattgattcaccttggagaaacactattaggatttagtctct 14353086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 32261037 - 32261081
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  32261037 aaaacaagggtttagaagccaacaacaaaactaaggtttgtagag 32261081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 6996225 - 6996280
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||| ||||||||||||| ||||    
T  6996225 gagatggtggacaaggccaggagtgccattgtcttgtacctcggggataaagtttt 6996280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 16226809 - 16226864
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| | ||||||||||||||||||||||| ||||    
T  16226809 gagatggtggacaaggccaggagtgccgttgtcttgtgcctcggggataaagtttt 16226864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 47178003 - 47178058
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| | ||||||||||||||||||||||| ||||    
T  47178003 gagatggtggacaaggccaggagtgccgttgtcttgtgcctcggggataaagtttt 47178058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 20300773 - 20300827
Alignment:
Q  14 agatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||||| | ||||| |||||||||||||||||| |||||| ||||    
T  20300773 agatggtggacaaggccaggagtgccattgtcttgtgcctcggagataaagtttt 20300827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 13784902 - 13784837
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    |||||| |||||| ||||| ||||| |||||||||||||||| | |||||| |||| |||||||||    
T  13784902 gagatgatggacagggctatgagtggcattgtcttgtgcctcagagataaaattttgagggatgtc 13784837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 28223016 - 28222951
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||| ||||||||||||| || | ||||||||||||||||||| || ||| |||| |||||||||    
T  28223016 gagatagtggacaaggctaggaatttcattgtcttgtgcctcggtgacaaagttttgagggatgtc 28222951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 2232580 - 2232620
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  2232580 ttgattcaccttgaacaaaacactattaggattgagtctct 2232620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 3805874 - 3805822
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||| || || |||||||| ||| |||||||||||||||||||||||||||    
T  3805874 agagtaaaagaataagggtttggaaaccaacaacaaaactagagtttgtagag 3805822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 4144882 - 4144842
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  4144882 ttgattcaccttgaacaaaacactattaggattgagtctct 4144842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 27916499 - 27916543
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||    
T  27916499 aaaacaagggtttagaagccagcaagaaaactagggtttgtagag 27916543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 31047794 - 31047751
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  31047794 aaaacaagagtttagaagccaacaacaaaactag-gtttgtagag 31047751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 3805776 - 3805721
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||| || |  ||||||||||||||||| |||||||||||| ||||    
T  3805776 gagatggtggacaatgccagaagtgtcattgtcttgtgtctcggggataaagtttt 3805721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 6115302 - 6115264
Alignment:
Q  197 ttgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  6115302 ttgattcaccttgaaaaa-cactattaggattgagtctct 6115264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 8213745 - 8213690
Alignment:
Q  179 gttgggattaaatcaccattgattcaccttgaaaaaacactattaggattgagtct 234  Q
    |||| |||| ||||||||||||||||||||  | |||||||||||||||| |||||    
T  8213745 gttgagattgaatcaccattgattcaccttagacaaacactattaggatttagtct 8213690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 8348703 - 8348648
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||| |||||||| | ||||||||||||||| |||||| |||||||| ||||    
T  8348703 gagatggtagacaaggccatgagtgtcattgtcttatgcctcagggataaagtttt 8348648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 28203337 - 28203282
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||| ||| | | ||||| ||||||||||||||||||||||||| ||||    
T  28203337 gagatggtggataagtccaggagtgccattgtcttgtgcctcggggataaagtttt 28203282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 31424660 - 31424613
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggat 60  Q
    ||||||||||||||||  | ||||| ||||||||||||||||||||||    
T  31424660 gagatggtggacaaggtcaggagtgccattgtcttgtgcctcggggat 31424613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 26332851 - 26332794
Alignment:
Q  96 tgagatagagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||| |||| | |||||||||||||||||||||||| |||||| ||| ||||||||||    
T  26332851 tgagagagaggataaaaacaagggtttagaagccaac-acaaaaatagggtttgtagag 26332794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 2949512 - 2949471
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  2949512 aaacaagggtttagaatgacaacaacaaaactagagtttgta 2949471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 154
Target Start/End: Original strand, 14352970 - 14353003
Alignment:
Q  121 ttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||||||||||||||||| ||||||||||    
T  14352970 ttagaagccaacaacaaaactagggtttgtagag 14353003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 2393481 - 2393441
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  2393481 ttgattcaccttgaacaaagcactattaggattgagtctct 2393441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 2401420 - 2401380
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  2401420 ttgattcaccttgaacaaagcactattaggattgagtctct 2401380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 8347550 - 8347510
Alignment:
Q  111 aaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    ||||||||||||||||| |||||| |||||||| |||||||    
T  8347550 aaacaagggtttagaagtcaacaagaaaactagggtttgta 8347510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 9521698 - 9521738
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  9521698 ttgattcaccttgaacaaagcactattaggattgagtctct 9521738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 9526449 - 9526489
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  9526449 ttgattcaccttgaacaaagcactattaggattgagtctct 9526489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 13127373 - 13127309
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgt 77  Q
    |||||||||||||| || | ||||| |||| ||||||||||| |||||||| |||| || |||||    
T  13127373 gagatggtggacaaagccaggagtgccattttcttgtgcctctgggataaaattttgagagatgt 13127309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 25134054 - 25134094
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  25134054 ttgattcaccttgaacaaatcactattaggattgagtctct 25134094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 30738831 - 30738792
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  30738831 attgattcaccttggaaaa-cactattaggattgagtctct 30738792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 6570563 - 6570625
Alignment:
Q  16 atggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  6570563 atggtggacaaggctaggagtgtcattgtcttgtgcctcggggataaaattttgagggatgtc 6570625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 18391766 - 18391701
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||||||||| |||| |||||||||    
T  18391766 gagatggtggacaaggcgaggagcgccattgtcttgtgcctcggggataaagttttgagggatgtc 18391701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 11081521 - 11081565
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  11081521 aaaacaagggtttagaagccaacaacaaaactagggtttgtagag 11081565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 36100 - 36155
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  36100 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 36155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 21678709 - 21678764
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| ||||| ||||    
T  21678709 gagatggtggacaaggccaagagtgccattgtcttgtgcctcgggaataaagtttt 21678764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 24749237 - 24749292
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||| ||||    
T  24749237 gagatggtggacaaggccaaaagtgccattgtcttgtgcctcggggataaagtttt 24749292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 38394636 - 38394691
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  38394636 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 38394691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 24817001 - 24816951
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||||||||    
T  24817001 gagatggtggacaaggccaggagtgtcattgtcttatgcctcggggataaa 24816951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 6594128 - 6594063
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||||| ||| |||| |||||||||    
T  6594128 gagatggtggacaaggcaaggagcgccattgtcttgtgcctcggggacaaagttttgagggatgtc 6594063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 47675732 - 47675667
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||| || ||| |||| |||||||||    
T  47675732 gagatggtggacaaggctaggagtgccattgtattgtgcctcggtgacaaagttttgagggatgtc 47675667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 12310215 - 12310175
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  12310215 attgattcaccttgaacaaacactattaggattgagtctct 12310175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 13290137 - 13290073
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgt 77  Q
    ||||||||||||||||| |  ||||||||||||||||||||| |||||||| |||| || |||||    
T  13290137 gagatggtggacaaggccagaagtgtcattgtcttgtgcctcagggataaagttttgagagatgt 13290073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 1048927 - 1048872
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||  | ||||| ||||||||||||||||||||||||| ||||    
T  1048927 gagatggtggacaaggtcaggagtgccattgtcttgtgcctcggggataaagtttt 1048872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4295592 - 4295529
Alignment:
Q  1 agtggagaag-cagagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    |||||||||| | ||||||||||||||||| | |||||||||||||||||||||| || |||||    
T  4295592 agtggagaagaccgagatggtggacaaggccaggagtgtcattgtcttgtgcctcaggaataaa 4295529  T

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Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 7351289 - 7351234
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| | ||||||||||||||||||||||| ||||    
T  7351289 gagatggtggacaaggccaggagtgccgttgtcttgtgcctcggggataaagtttt 7351234  T

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Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 28486215 - 28486270
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||||||||| ||||    
T  28486215 gagatggtggacaaggccaggagagccattgtcttgtgcctcggggataaaatttt 28486270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 6047137 - 6047198
Alignment:
Q  16 atggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgt 77  Q
    ||||||||||||||||  |||| |||||||||||| ||| ||||||| |||||||| |||||    
T  6047137 atggtggacaaggctagaagtgccattgtcttgtgtctcagggataatttttttagagatgt 6047198  T

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Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 6048884 - 6048925
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  6048884 aaaacaagggtttagaagccaacatcaaaactagggtttgta 6048925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 10691183 - 10691240
Alignment:
Q  179 gttgggattaaatcaccattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||| |||| ||||| ||||||||||||||||| ||||||||||| |||||| |||||    
T  10691183 gttgagattgaatcaacattgattcaccttgaataaacactattaagattgaatctct 10691240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 3320249 - 3320209
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  3320249 ttgattcaccttgaacaaaacactattaggattgagtctct 3320209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 3324997 - 3324957
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  3324997 ttgattcaccttgaacaaaacactattaggattgagtctct 3324957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 6048960 - 6049000
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  6048960 attgattcaccttgaagaaacactattaggattgaatctct 6049000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 7069763 - 7069803
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  7069763 ttgattcaccttgaacaaaacactattaggattgagtctct 7069803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 7074770 - 7074810
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  7074770 ttgattcaccttgaacaaaacactattaggattgagtctct 7074810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 15541194 - 15541154
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  15541194 ttgattcaccttgaacaaaacactattaggattgagtctct 15541154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 21369625 - 21369665
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  21369625 ttgattcaccttgaacaaaacactattaggattgagtctct 21369665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 25351336 - 25351376
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25351336 ttgattcaccttgaacaaaacactattaggattgagtctct 25351376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 25357030 - 25357070
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25357030 ttgattcaccttgaacaaaacactattaggattgagtctct 25357070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 25405376 - 25405416
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25405376 ttgattcaccttgaacaaaacactattaggattgagtctct 25405416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 25410113 - 25410153
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25410113 ttgattcaccttgaacaaaacactattaggattgagtctct 25410153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 42006646 - 42006686
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  42006646 ttgattcaccttgaacaaaacactattaggattgagtctct 42006686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 44725228 - 44725280
Alignment:
Q  16 atggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||  | ||||| ||||||||||||||||||||||||| ||||    
T  44725228 atggtggacaaggtcaggagtgccattgtcttgtgcctcggggataaagtttt 44725280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 7094099 - 7094044
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||  | ||||||||||||||| ||||| ||||||||| ||||    
T  7094099 gagatggtggacaaggtcaggagtgtcattgtcttatgccttggggataaagtttt 7094044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 22135453 - 22135508
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||||||   ||||| | ||||||||||||||||||||||| ||||    
T  22135453 gagatggtggacaaggcccggagtgccgttgtcttgtgcctcggggataaagtttt 22135508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 30246869 - 30246915
Alignment:
Q  107 agaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||| ||||||||||||||||||||||||||| |||| |||||    
T  30246869 agaaaaaca-gggtttagaagccaacaacaaaactagggtttatagag 30246915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 31159326 - 31159272
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| |||||||||||| |||||||||||| ||||    
T  31159326 gagatggtggacaaggccaggagtgccattgtcttgtg-ctcggggataaagtttt 31159272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 40550480 - 40550535
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||||||   ||||| | ||||||||||||||||||||||| ||||    
T  40550480 gagatggtggacaaggcccggagtgccgttgtcttgtgcctcggggataaagtttt 40550535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 48489988 - 48490043
Alignment:
Q  23 acaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||| |||||||||||||||||||||||| || ||| | || |||||||||    
T  48489988 acaaggctaggagtgtcattgtcttgtgcctcggtgacaaagtattgagggatgtc 48490043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 7471619 - 7471569
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||| |||||    
T  7471619 gagatggtggacaaggccaggagggccattgtcttgtgcctcgggaataaa 7471569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 7189160 - 7189209
Alignment:
Q  14 agatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    |||||||||||| ||| ||||||| | |||||||||||||||| ||||||    
T  7189160 agatggtggacagggccaagagtgccgttgtcttgtgcctcggagataaa 7189209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 20137388 - 20137347
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  20137388 aaacaagggtttagaaaggcaacaacaaaactagagtttgta 20137347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 2120882 - 2120922
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  2120882 ttgattcaccttggacaaaacactattaggattgagtctct 2120922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 7464717 - 7464677
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  7464717 ttgattcaccttgaacaaagcactattaggattgagtctct 7464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 8378703 - 8378663
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  8378703 ttgattcaccttgaacaaaacactattaagattgagtctct 8378663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 16297223 - 16297184
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  16297223 attgattcaccttggaaaa-cactattaggattgagtctct 16297184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 26210630 - 26210670
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||| | ||| ||||||||||||||||||||    
T  26210630 attgattcaccttggagaaatactattaggattgagtctct 26210670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 30246953 - 30246993
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  30246953 ttgattcaccttgaacaaagcactattaggattgagtctct 30246993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 44016860 - 44016820
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  44016860 ttgattcaccttgaacaaagcactattaggattgagtctct 44016820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 44144065 - 44144025
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  44144065 ttgattcaccttgaacaaagcactattaggattgagtctct 44144025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 44512724 - 44512684
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  44512724 ttgattcaccttgaacaaagcactattaggattgagtctct 44512684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 230
Target Start/End: Original strand, 11066556 - 11066685
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag-nnnnnnnnggaaataaacattatagttgggattaaatcaccattga 200  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||         || |||||||| ||  |||| |||| || |||||||||    
T  11066556 agagtagaaaaacaagggtttagaagtcaacaacaaaactgaagtttgtagagttttctcttggcaataaacactagggttgagattgaaccaccattga 11066655  T
Q  201 ttcaccttgaaaaaacactattaggattga 230  Q
    ||||||||| | ||||||||||||||||||    
T  11066656 ttcaccttggagaaacactattaggattga 11066685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 6717086 - 6717151
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| |||| |||||||||    
T  6717086 gagatggtggacaaggcgaggagtgccattgtcttgtgcctcggggataaagttttgagggatgtc 6717151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 7762844 - 7762909
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || ||| |||| |||||||||    
T  7762844 gagatggtggacaaggctaagagtgccattgtcttgtgcctcggtgacaaagttttaagggatgtc 7762909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 37407262 - 37407327
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| |||||||||    
T  37407262 gagatggtggacaaggctaggagtgccattgtcttgtgcctcggggacaaagttttgagggatgtc 37407327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 11072912 - 11072964
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  11072912 agagtagaaaaacaagggtttagaagtcaacaacaaaactagagtttggagag 11072964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 5192270 - 5192325
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  5192270 gagatggtggacaaggccaagagtgccattgtcttgtgcctcggggataaagtttt 5192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 11168721 - 11168776
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  11168721 gagatggtggacaaggctaggagtgccattgtcttgtgcctcggggataaagtttt 11168776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 23199732 - 23199669
Alignment:
Q  14 agatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgt 77  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| ||||||||    
T  23199732 agatggtggacaaggctaggagtgccattgtcttgtgcctcggggacaaagttttgagggatgt 23199669  T

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Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 53973874 - 53973831
Alignment:
Q  106 tagaaaaacaagggtttagaagccaacaacaaaactagagtttg 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  53973874 tagaaaaacaagggtttagaagccaacaacaaaactagagtttg 53973831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 53917312 - 53917258
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaatttt 67  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  53917312 gagatggtggacaaggccaggagtgtcattgtcttgtgcctcgggtataaatttt 53917258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 9635718 - 9635653
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| |||| |||||||||    
T  9635718 gagatggtggacaaggctaggagtgccattgtcttatgcctcggggacaaagttttgagggatgtc 9635653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 10209774 - 10209839
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||||||||| |||| |||||||||    
T  10209774 gagatggtggacaaggcgaggagcgccattgtcttgtgcctcggggataaagttttgagggatgtc 10209839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 32891663 - 32891728
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| | |||||||||||||||| ||||||  |||||||||||||    
T  32891663 gagatggtggacaaggctaggagtgccgttgtcttgtgcctcggtgataaaaattttagggatgtc 32891728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 29811443 - 29811507
Alignment:
Q  14 agatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    |||||||||||||||||| ||||| |||||||||||||||||| || ||| |||| |||||||||    
T  29811443 agatggtggacaaggctaggagtgccattgtcttgtgcctcggtgacaaagttttgagggatgtc 29811507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 3315302 - 3315357
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  3315302 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 3315357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 5898029 - 5898084
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  5898029 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 5898084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 42990919 - 42990974
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||    
T  42990919 gagatggtggacaaggccaggagtgtcattgtcttgtgcctcggagataaagtttt 42990974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5259930 - 5259852
Alignment:
Q  1 agtggagaag-cagagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    |||||||||| | ||||||||||||| ||||| ||||| ||||||||||||||||| ||| ||| |||| |||||||||    
T  5259930 agtggagaagaccgagatggtggacatggctaggagtgccattgtcttgtgcctcgaggaaaaagttttaagggatgtc 5259852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 1620110 - 1620057
Alignment:
Q  15 gatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  1620110 gatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 1620057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 4600314 - 4600249
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||||| ||| |||| |||||||||    
T  4600314 gagatggtggacaaggcgaggagcgccattgtcttgtgcctcggggacaaagttttgagggatgtc 4600249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 10059040 - 10059105
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||||| ||||||| ||||||||||||| ||| |||| |||||||||    
T  10059040 gagatggtggacaaggcgaggagtgccattgtcctgtgcctcggggacaaagttttgagggatgtc 10059105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 22834602 - 22834538
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||| |||||| |||| |||||||||    
T  22834602 gagatggtggaca-ggctaggagtgccattgtcttgtgcctcggtgataaagttttgagggatgtc 22834538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 23409926 - 23409861
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    |||||||||||||| |||| ||||| ||||||||||| ||||||||| ||| |||| |||||||||    
T  23409926 gagatggtggacaatgctaggagtgacattgtcttgtacctcggggacaaagttttgagggatgtc 23409861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 23941723 - 23941773
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  23941723 agagtagaaaaac--gggtttagaagccaacaacaaaactagggtttgtagag 23941773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 25634498 - 25634551
Alignment:
Q  15 gatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||| || ||||||| ||||||||||||||||||||||||||||||| ||||    
T  25634498 gatggtagaaaaggctaggagtgtcattgtcttgtgcctcggggataaagtttt 25634551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 43226697 - 43226752
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| |||||||||||||||||| |||||| ||||    
T  43226697 gagatggtggacaaggcgaggagtgccattgtcttgtgcctcggagataaagtttt 43226752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 10056818 - 10056883
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||| ||||||||||||| ||| |||| |||||||||    
T  10056818 gagatggtggacaaggcgaggagcgccattgtcctgtgcctcggggacaaagttttgagggatgtc 10056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 10061262 - 10061327
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||| ||||||||||||| ||| |||| |||||||||    
T  10061262 gagatggtggacaaggcgaggagcgccattgtcctgtgcctcggggacaaagttttgagggatgtc 10061327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 10063484 - 10063549
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||| ||||||||||||| ||| |||| |||||||||    
T  10063484 gagatggtggacaaggcgaggagcgccattgtcctgtgcctcggggacaaagttttgagggatgtc 10063549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 10065706 - 10065771
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||| ||||||||||||| ||| |||| |||||||||    
T  10065706 gagatggtggacaaggcgaggagcgccattgtcctgtgcctcggggacaaagttttgagggatgtc 10065771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 23637006 - 23637047
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  23637006 aaaacaagggtttagaagccaacaagaaaactagggtttgta 23637047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 27421261 - 27421322
Alignment:
Q  16 atggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgt 77  Q
    |||||||| ||||| | ||||||||||||||||||||| ||||||||| |||| || |||||    
T  27421261 atggtggaaaaggccaggagtgtcattgtcttgtgccttggggataaagttttgagagatgt 27421322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 6303293 - 6303333
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  6303293 ttgattcaccttgaacaaaacactattaggattgagtctct 6303333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 7768553 - 7768597
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||    
T  7768553 aaaacaagggtttagaagccaacatcaaaactaaggtttgtagag 7768597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 10094273 - 10094233
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  10094273 ttgattcaccttgaacaaaacactattaggattgagtctct 10094233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 10100290 - 10100250
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  10100290 ttgattcaccttgaacaaaacactattaggattgagtctct 10100250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 10201153 - 10201113
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  10201153 ttgattcaccttgaacaaaacactattaggattgagtctct 10201113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 16462186 - 16462226
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  16462186 ttgattcaccttgaacaaaacactattaggattgagtctct 16462226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 22626183 - 22626143
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  22626183 ttgattcaccttgaacaaaacactattaggattgagtctct 22626143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 27544256 - 27544296
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  27544256 ttgattcaccttgaacaaaacactattaggattgagtctct 27544296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 31021342 - 31021302
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  31021342 attgattcaccttggagaaacactattaggattgagtctct 31021302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 47883081 - 47883041
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  47883081 ttgattcaccttgaacaaaacactattaggattgagtctct 47883041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 456527 - 456582
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| | |||||||||||||||| |||||| ||||    
T  456527 gagatggtggacaaggccaggagtgccgttgtcttgtgcctcggagataaagtttt 456582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 5858529 - 5858567
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtct 234  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  5858529 ttgattcaccttgaacaaaacactattaggattgagtct 5858567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 15830834 - 15830780
Alignment:
Q  14 agatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||| ||||  |||||||||||||||||||||  ||||||| ||||    
T  15830834 agatggtggacaaagctagaagtgtcattgtcttgtgcctcaaggataaagtttt 15830780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 31116334 - 31116388
Alignment:
Q  14 agatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||| ||||||||||||| ||||||| |||||||||||||| | |||||| ||||    
T  31116334 agattgtggacaaggctaggagtgtccttgtcttgtgcctcagagataaagtttt 31116388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 23633439 - 23633480
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    ||||||||| ||||||||||||||| |||||||| |||||||    
T  23633439 aaaacaaggatttagaagccaacaagaaaactagggtttgta 23633480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 7768631 - 7768670
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  7768631 attgattcaccttggaaaa-cactattaggattgagtctct 7768670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 10208199 - 10208159
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  10208199 ttgattcaccttgaacaaaacactattacgattgagtctct 10208159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 18098808 - 18098764
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggg 57  Q
    ||||||||||||||||| | ||||| |||||||||| ||||||||    
T  18098808 gagatggtggacaaggccaggagtgccattgtcttgcgcctcggg 18098764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 20031517 - 20031477
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  20031517 ttgattcaccttgaacaaagcactattaggattgagtctct 20031477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 28137572 - 28137532
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgt 150  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  28137572 aaacaagggtttagaaaggcaacaacaaaactagagtttgt 28137532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 29914152 - 29914112
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  29914152 ttgattcaccttgaacaaagcactattaggattgagtctct 29914112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 47878370 - 47878330
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  47878370 ttgattcaccttgaacaaagcactattaggattgagtctct 47878330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 54193209 - 54193249
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  54193209 ttgattcaccttgaacaaagcactattaggattgagtctct 54193249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 35430160 - 35430298
Alignment:
Q  99 gatagagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag-nnnnnnnnggaaataaacattatagttgggattaaatcaccat 197  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||| ||||||| ||         || |||||||| ||  ||| ||||| |||||||||    
T  35430160 gatagagttgaaaaacaagggtttagaagtcaacatcaaaactagggtttgtacagttttctcttggcaataaacactagggtttggattgaatcaccat 35430259  T
Q  198 tgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||| | |||||||||||  |||||||||||    
T  35430260 tgattcaccttggagaaacactattacaattgagtctct 35430298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 29720948 - 29721013
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| |||||||||    
T  29720948 gagatggtggacaaggctaggagtgccattgtcttgtgcctcggggacaaagttttgagggatgtc 29721013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 534332 - 534397
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| || ||| |||| |||||||||    
T  534332 gagatggtggacaaggctaggagtgccattgtcttgtgcctcggtgacaaagttttgagggatgtc 534397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 9788816 - 9788751
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||||| ||| |||| |||||||||    
T  9788816 gagatgatggacaaggctaggagtgccattgtcttgtgcctcggggacaaagttttgagggatgtc 9788751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 26171340 - 26171405
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||| ||| |||| |||||||||    
T  26171340 gagatggtggacaaggctaggagtgccattgtcttgtgcctcgaggacaaagttttaagggatgtc 26171405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 5777887 - 5777836
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  5777887 agagtagaaaaacaaggatt-agaagccaacaacaaaactagagtttgtagag 5777836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 13294677 - 13294812
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagagnnnnnnnn-ggaaataaacattatagttgggattaaatcaccattga 200  Q
    ||||||||||||||||| || | ||| ||||||||||||||||||||||||||         || || || || ||  ||||||||| ||||||||||||    
T  13294677 agagtagaaaaacaaggattaa-aagtcaacaacaaaactagagtttgtagagaattctcttggcaacaagcactagggttgggattgaatcaccattga 13294775  T
Q  201 ttcaccttgaa-aaaacactattaggattgagtctct 236  Q
    || |||||||| ||||||||||||||||||| |||||    
T  13294776 tttaccttgaacaaaacactattaggattgattctct 13294812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 16093489 - 16093450
Alignment:
Q  197 ttgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16093489 ttgattcaccttgaaaaaacactattaggattgagtctct 16093450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 20043626 - 20043676
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  20043626 gagatggtggacaaggccaagagtgccattgttttgtgcctcggggataaa 20043676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 16545010 - 16545075
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||||| ||| |||| |||||||||    
T  16545010 gagatggtggacaaggcgaggagcgccattgtcttgtgcctcggggacaaagttttgagggatgtc 16545075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 40380689 - 40380754
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||||| ||| |||| |||||||||    
T  40380689 gagatggtggacaaggcgaggagcgccattgtcttgtgcctcggggacaaagttttgagggatgtc 40380754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 42428026 - 42427961
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    |||||||||||||||||||  |||||||||||||||||||| || || ||| |||| |||||||||    
T  42428026 gagatggtggacaaggctagaagtgtcattgtcttgtgccttggtgacaaagttttgagggatgtc 42427961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 29748351 - 29748395
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||    
T  29748351 aaaacaagggtttagaagccaacaagaaaactagggtttgtagag 29748395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 658659 - 658714
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||  | ||||| ||||||||||||||||||||||||| ||||    
T  658659 gagatggtggacaaggtcaggagtgccattgtcttgtgcctcggggataaagtttt 658714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 6745709 - 6745764
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||| |||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  6745709 gagatggtagacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 6745764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 27911073 - 27911128
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| |||||||||||||||||| |||||| ||||    
T  27911073 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggagataaagtttt 27911128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 31543374 - 31543429
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| | ||||||||||||||||||||||| ||||    
T  31543374 gagatggtggacaaggccaggagtgccgttgtcttgtgcctcggggataaagtttt 31543429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 34479057 - 34479002
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| | ||||||||||||||||||||||| ||||    
T  34479057 gagatggtggacaaggccaggagtgccgttgtcttgtgcctcggggataaagtttt 34479002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 25806102 - 25806152
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||| |||||    
T  25806102 gagatggtggacaaggccaggagtgccattgtcttgtgcctcgggtataaa 25806152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 2144842 - 2144797
Alignment:
Q  109 aaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||    
T  2144842 aaaaacaagggtttagaagccaacactaaaactagggtttgtagag 2144797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 1170794 - 1170834
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  1170794 ttgattcaccttgaacaaaacactattaggattgagtctct 1170834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 1240411 - 1240451
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  1240411 ttgattcaccttgaacaaaacactattaggattgagtctct 1240451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 2298200 - 2298160
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  2298200 ttgattcaccttgaacaaaacactattaggattgagtctct 2298160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 35385651 - 35385611
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  35385651 ttgattcaccttgaacaaaacactattaggattgagtctct 35385611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 10750339 - 10750394
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | |||||   ||||||||||||||||||||||| ||||    
T  10750339 gagatggtggacaaggccaggagtgctgttgtcttgtgcctcggggataaagtttt 10750394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 15356487 - 15356432
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||||||   ||||| | ||||||||||||||||||||||| ||||    
T  15356487 gagatggtggacaaggcccggagtgccgttgtcttgtgcctcggggataaagtttt 15356432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 18467325 - 18467380
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| |||||||||||| ||||| |||||| ||||    
T  18467325 gagatggtggacaaggccaggagtgccattgtcttgtgtctcggagataaagtttt 18467380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 23665687 - 23665742
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||||||   ||||| | ||||||||||||||||||||||| ||||    
T  23665687 gagatggtggacaaggcccggagtgccgttgtcttgtgcctcggggataaagtttt 23665742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 32520424 - 32520557
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag-nnnnnnnnggaaataaacattatagttgggattaaatcaccattga 200  Q
    |||||||||||| |||| || ||||||||||||||||||||| ||||||||||         || || ||||| ||| ||||| ||| ||||| ||||||    
T  32520424 agagtagaaaaataaggatt-agaagccaacaacaaaactag-gtttgtagagatctctggtggcaacaaacactatggttggaattgaatcatcattga 32520521  T
Q  201 ttcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||| ||  | ||||||||||| ||||||||||||    
T  32520522 ttcacattcgagaaacactattaagattgagtctct 32520557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 15225048 - 15225015
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactag 143  Q
    |||||||||||||||||||||||| |||||||||    
T  15225048 aaaacaagggtttagaagccaacatcaaaactag 15225015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 33790906 - 33790857
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataa 62  Q
    ||||||||||||||||| ||||||| ||||||||| || ||||| |||||    
T  33790906 gagatggtggacaaggcaaagagtgccattgtcttatgtctcggagataa 33790857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 2144764 - 2144724
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||| | ||||||||||||||| ||||||||    
T  2144764 attgattcaccttggagaaacactattaggatggagtctct 2144724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 10586842 - 10586882
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgt 150  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  10586842 aaacaagggtttagaatggcaacaacaaaactagagtttgt 10586882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 10627347 - 10627387
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  10627347 ttgattcaccttgaacaaaacactgttaggattgagtctct 10627387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 17841448 - 17841408
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  17841448 ttgattcaccttgaacaaagcactattaggattgagtctct 17841408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 22672817 - 22672857
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  22672817 ttgattcaccttgaacaaagcactattaggattgagtctct 22672857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 25452478 - 25452518
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  25452478 ttgattcaccttgaacaaagcactattaggattgagtctct 25452518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 28786387 - 28786427
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  28786387 ttgattcaccttgaacaaagcactattaggattgagtctct 28786427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 31782656 - 31782616
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  31782656 ttgattcaccttgaacaaaacactgttaggattgagtctct 31782616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 34033769 - 34033729
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||||| |||||| | ||||||||||||||||||||||||    
T  34033769 attgatttaccttggagaaacactattaggattgagtctct 34033729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 5408664 - 5408599
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| |||||||||    
T  5408664 gagatggtggacaaggctaggagtgccattgtcttgtgcctcggggacaaagttttgagggatgtc 5408599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 5412989 - 5412924
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||| |||||||||    
T  5412989 gagatggtggacaaggctaggagtgccattgtcttgtgcctcggggacaaagttttgagggatgtc 5412924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 3631581 - 3631526
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  3631581 gagatggtggacaaggccaggagtgtcattgtcttgtgcctcggggataaagtttt 3631526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 11137212 - 11137276
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgt 77  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||| |||| || |||||    
T  11137212 gagatggtggacaaggctaggagtgccattgtcttgtgcctcagggataaagttttgagagatgt 11137276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 25463103 - 25463039
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgt 77  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||| || |||||    
T  25463103 gagatggtagacaaggccaagagtgccattgtcttgtgcctcggggataaagttttgagagatgt 25463039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 3833315 - 3833430
Alignment:
Q  121 ttagaagccaacaacaaaactagagtttgtagagnnnnnnnnggaaataaacattatagttgggattaaatcaccattgattcaccttgaaaaaacacta 220  Q
    |||||||||||||| |||||||||||||||| ||         | || ||||||||  ||||||||| ||||||||||||||||||||||| ||| ||||    
T  3833315 ttagaagccaacaagaaaactagagtttgtaaagaattctcttgcaacaaacattagggttgggattgaatcaccattgattcaccttgaataaagacta 3833414  T
Q  221 ttaggattgagtctct 236  Q
     || ||| ||||||||    
T  3833415 ctatgatcgagtctct 3833430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 26068033 - 26067978
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||| ||||    
T  26068033 gagatggtggacaaggccaggagtgtcgttgtcttgtgcctcggggataaagtttt 26067978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 33309530 - 33309585
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||| ||||    
T  33309530 gagatggtggacaaggccaggagtgtcgttgtcttgtgcctcggggataaagtttt 33309585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 12157892 - 12157957
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| ||||  ||||||||    
T  12157892 gagatggtggacaaggctaggagtgacattgtcttatgcctcggggaaaaagttttgggggatgtc 12157957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 26932201 - 26932146
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| | ||||||||||||||||||||||| ||||    
T  26932201 gagatggtggacaaggccaggagtgccgttgtcttgtgcctcggggataaagtttt 26932146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 17904632 - 17904594
Alignment:
Q  116 agggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  17904632 agggtttagaagccaacaacaaaactagggtttgtagag 17904594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 16553249 - 16553314
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||| ||||||||||| | ||| | ||||||||||||||||||||| ||| |||| |||||||||    
T  16553249 gagatcgtggacaaggcgaggagcgccattgtcttgtgcctcggggacaaagttttgagggatgtc 16553314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 16629805 - 16629870
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||| ||||||||||| | ||| | ||||||||||||||||||||| ||| |||| |||||||||    
T  16629805 gagatcgtggacaaggcgaggagcgccattgtcttgtgcctcggggacaaagttttgagggatgtc 16629870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 34165457 - 34165522
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||| ||||||||||||| ||| |||| |||||||||    
T  34165457 gagatggtggacaaggcgaggagcgccattgtcctgtgcctcggggacaaagttttgagggatgtc 34165522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 3577713 - 3577673
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  3577713 ttgattcaccttgaacaaaacactattaggattgagtctct 3577673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 13878710 - 13878750
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  13878710 ttgattcaccttgaacaaaacactattaggattgagtctct 13878750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 13883458 - 13883498
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  13883458 ttgattcaccttgaacaaaacactattaggattgagtctct 13883498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 16785902 - 16785942
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  16785902 ttgattcaccttgaacaaaacactattaggattgagtctct 16785942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 26887423 - 26887383
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  26887423 ttgattcaccttgaacaaaacactattaggattgagtctct 26887383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 31248913 - 31248873
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  31248913 ttgattcaccttgaacaaaacactattaggattgagtctct 31248873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 35201525 - 35201485
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  35201525 ttgattcaccttgaacaaaacactattaggattgagtctct 35201485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 4567488 - 4567527
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcc 52  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  4567488 gagatggtggacaaggccatgagtgtcattgtcttgtgcc 4567527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 7542599 - 7542543
Alignment:
Q  179 gttgggattaaatcaccattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||||||| |||||| |||||||||| ||| | ||||||||||| ||||||||||||    
T  7542599 gttgggattgaatcacaattgattcac-ttggagaaacactattatgattgagtctct 7542543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 11138422 - 11138459
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtc 233  Q
    |||||||||||||| | |||||||||||||||||||||    
T  11138422 attgattcaccttggagaaacactattaggattgagtc 11138459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 12911193 - 12911132
Alignment:
Q  16 atggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgt 77  Q
    |||||||| ||||  | |||||||||||||||||||||| |||||||| |||| || |||||    
T  12911193 atggtggataaggtcatgagtgtcattgtcttgtgcctcagggataaagttttgagagatgt 12911132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 17852577 - 17852618
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  17852577 aaacaagggtttagaatgacaacaacaaaactagagtttgta 17852618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 26065021 - 26065062
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  26065021 aaacaagggtttagaatggcaacaacaaaactagagtttgta 26065062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 26084990 - 26085031
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  26084990 aaacaagggtttagaatggcaacaacaaaactagagtttgta 26085031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 30443335 - 30443368
Alignment:
Q  109 aaaaacaagggtttagaagccaacaacaaaacta 142  Q
    ||||||||||||||||||||||||| ||||||||    
T  30443335 aaaaacaagggtttagaagccaacatcaaaacta 30443368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 3395039 - 3395092
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | |||||||||  | |||||||||||||||||| ||||    
T  3395039 gagatggtggacaaggcaaggagtgtcat--tattgtgcctcggggataaagtttt 3395092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 11138339 - 11138383
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||||||||||||||||||  |||||||| |||| |||||    
T  11138339 aaaacaagggtttagaagccaacactaaaactagggtttttagag 11138383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 13467662 - 13467622
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  13467662 ttgattcaccttgaacaaagcactattaggattgagtctct 13467622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 17036038 - 17036078
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  17036038 ttgattcaccttgaacaaagcactattaggattgagtctct 17036078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 17695050 - 17695010
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  17695050 ttgattcaccttgaacaaagcactattaggattgagtctct 17695010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 19702061 - 19702021
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  19702061 ttgattcaccttgaacaaagcactattaggattgagtctct 19702021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 20526921 - 20526960
Alignment:
Q  196 attgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  20526921 attgattcaccttggaaaa-cactattaggattgagtctct 20526960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 33215810 - 33215850
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  33215810 ttgattcaccttgaataaagcactattaggattgagtctct 33215850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 41304676 - 41304627
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41304676 agagtagaaaaacaagggtttagaagccaacaacaaaactagggtttgta 41304627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 41303328 - 41303276
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41303328 agagtagaaaaacaagggtttagaagccaacaacaaagatagagtttgtagag 41303276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 17921742 - 17921793
Alignment:
Q  185 attaaatcaccattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17921742 attaaatcatcattgattcaccttgaagaaacactattaggattgagtctct 17921793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 21520331 - 21520277
Alignment:
Q  14 agatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  21520331 agatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaattttt 21520277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 19503974 - 19503919
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  19503974 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 19503919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 22405564 - 22405513
Alignment:
Q  17 tggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  22405564 tggtggacaaggctaggagtgccattgtcttgtgcctcggggataaagtttt 22405513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 36560779 - 36560724
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  36560779 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 36560724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 6263792 - 6263742
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  6263792 gagatggtggacaaggctaggagtgccattgtcttgtgcctcgggaataaa 6263742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 39287174 - 39287231
Alignment:
Q  96 tgagatagagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  39287174 tgagagagagtagaaaa-caagggtttagaagccaacaagaaaactagggtttgtagag 39287231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 7502957 - 7503010
Alignment:
Q  179 gttgggattaaatcaccattgattcaccttgaaaaaacactattaggattgagt 232  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||    
T  7502957 gttgggattgaatcaccattgatccaccttggagaaacactattaggattgagt 7503010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 35217607 - 35217553
Alignment:
Q  14 agatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||||| ||||    
T  35217607 agatggtggacaaggccaggagtgccgttgtcttgtgcctcggggataaagtttt 35217553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 10942713 - 10942672
Alignment:
Q  195 cattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  10942713 cattgtttcaccttgaagaaacactattaggattgagtctct 10942672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 10948582 - 10948541
Alignment:
Q  195 cattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  10948582 cattgtttcaccttgaagaaacactattaggattgagtctct 10948541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 30720829 - 30720772
Alignment:
Q  179 gttgggattaaatcaccattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    |||| |||| |||||| ||||||||| |||| | ||||||||||||||||||||||||    
T  30720829 gttgagattgaatcactattgattcatcttggagaaacactattaggattgagtctct 30720772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 17462419 - 17462459
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  17462419 ttgattcaccttgaacaaaacactattaggattgagtctct 17462459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 20050221 - 20050181
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  20050221 ttgattcaccttgaacaaaacactattaggattgagtctct 20050181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 20054964 - 20054924
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  20054964 ttgattcaccttgaacaaaacactattaggattgagtctct 20054924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 22712715 - 22712675
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  22712715 ttgattcaccttgaacaaaacactattaggattgagtctct 22712675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 22717424 - 22717384
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  22717424 ttgattcaccttgaacaaaacactattaggattgagtctct 22717384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 28459028 - 28458988
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  28459028 ttgattcaccttgaacaaaacactattaggattgagtctct 28458988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 39680028 - 39680068
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  39680028 ttgattcaccttgaacaaaacactattaggattgagtctct 39680068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 39686966 - 39687006
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  39686966 ttgattcaccttgaacaaaacactattaggattgagtctct 39687006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 45567392 - 45567432
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  45567392 ttgattcaccttgaacaaaacactattaggattgagtctct 45567432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 15693943 - 15693998
Alignment:
Q  181 tgggattaaatcaccattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||| || | |||||||||||||||  |||||||    
T  15693943 tgggattaaatcaccgttgattcaccgtggagaaacactattaggataaagtctct 15693998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 34575336 - 34575269
Alignment:
Q  169 aaacattatagttgggattaaatcaccattgattcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||||||||  |||| |||| ||| | ||||||||||||||| | ||||||||||||||| ||||||||    
T  34575336 aaacattagggttgagattgaataatcattgattcaccttggagaaacactattaggatggagtctct 34575269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 34574770 - 34574732
Alignment:
Q  39 cattgtcttgtgcctcggggataaattttttagggatgt 77  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  34574770 cattgtcttgttcctcggggataaattttttagagatgt 34574732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 20146885 - 20146844
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||||| |||||| |||||||| |||||||    
T  20146885 aaaacaagggtttagaagtcaacaagaaaactagggtttgta 20146844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 31733044 - 31733003
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  31733044 aaacaagggtttagaaaggcaacaacaaaactagagtttgta 31733003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 42019473 - 42019408
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    |||||||| | |||||| |  ||||| ||||||||||||||| |||||||| |||| |||||||||    
T  42019473 gagatggttgccaaggcaataagtgttattgtcttgtgcctctgggataaagttttgagggatgtc 42019408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 42452759 - 42452800
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  42452759 aaacaagggtttagaaaggcaacaacaaaactagagtttgta 42452800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 2736188 - 2736228
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  2736188 ttgattcacattgaacaaaacactattaggattgagtctct 2736228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 2740924 - 2740964
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  2740924 ttgattcacattgaacaaaacactattaggattgagtctct 2740964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 7502853 - 7502904
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||||||||||| |  |||||| |||||||||||||| ||||||||||    
T  7502853 agagtagaaaaacaaggatc-agaagcaaacaacaaaactagggtttgtagag 7502904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 11578383 - 11578343
Alignment:
Q  111 aaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    ||||||||||||||||| |||||| |||||||| |||||||    
T  11578383 aaacaagggtttagaagtcaacaaaaaaactagggtttgta 11578343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 17932617 - 17932657
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  17932617 ttgattcaccttgaacaaagcactattaggattgagtctct 17932657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 17943520 - 17943560
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  17943520 ttgattcaccttgaacaaatcactattaggattgagtctct 17943560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 27517838 - 27517798
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  27517838 ttgattcaccttgaacaaagcactattaggattgagtctct 27517798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 30478977 - 30479017
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  30478977 ttgattcaccttgaacaaagcactattaggattgagtctct 30479017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 33674604 - 33674564
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  33674604 ttgattcaccttgaacaaagcactattaggattgagtctct 33674564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 38190980 - 38191020
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  38190980 ttgattcaccttgaacaaaacactattaagattgagtctct 38191020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 43139355 - 43139399
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||    
T  43139355 aaaacaagggtttagaagccaacacaaaaacttgggtttgtagag 43139399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 57749 - 57590
Alignment:
Q  77 tcttgtatcaattcaaatatgagatagagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgtagag--nnnnnnnnggaaataaacat 174  Q
    ||||||||||| | ||||||| ||  |||||||| ||||||| |||||||||||||||||||||||||||||||||||          | ||  |||||     
T  57749 tcttgtatcaaatgaaatatgcga--gagtagaagaacaagg-tttagaagccaacaacaaaactagagtttgtagagtttactcttggcaacaaaacac 57653  T
Q  175 tatagttgggattaaatcaccattg-attcaccttgaaaaaacactattaggattgagtctct 236  Q
    ||| |||| |||| |||||| || | ||||||||||||||||||||||||||||||| |||||    
T  57652 tatggttgagattgaatcactatagaattcaccttgaaaaaacactattaggattgaatctct 57590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 5136665 - 5136730
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||| ||| |||| |||||||||    
T  5136665 gagatggtggacaaggcgaggagtgccattgtcttgtgcctcggggacaaagttttgagggatgtc 5136730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 16933786 - 16933731
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  16933786 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 16933731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 22134255 - 22134200
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  22134255 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 22134200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 47563450 - 47563505
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  47563450 gagatgatggacaaggccaagagtgacattgtcttgtgcctcggggataaagtttt 47563505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 8393992 - 8394046
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaatttt 67  Q
    ||||||||||||||||| | ||| | |||||||||||||||||||||||||||||    
T  8393992 gagatggtggacaaggcgaggagcgccattgtcttgtgcctcggggataaatttt 8394046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 52094957 - 52094895
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggat 75  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| || ||| |||| ||||||    
T  52094957 gagatggtggacaaggctatgagtgtcattgtcttgtgcttcggtgacaaagttttgagggat 52094895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 5872388 - 5872449
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttaggga 74  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| || ||| |||| |||||    
T  5872388 gagatggtggacaaggctatgagtgccattgtcttgtgcctcggtgacaaagttttgaggga 5872449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 7123281 - 7123346
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||| | ||| | ||||||||||||||||||||| ||| |||| |||||||||    
T  7123281 gagatggtggacaaggcgaggagcgccattgtcttgtgcctcggggacaaagttttgagggatgtc 7123346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 54906622 - 54906671
Alignment:
Q  102 agagtagaaaaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||||| |||||||||||||| |||||||| |||||||    
T  54906622 agagtagaaaaacaagggcttagaagccaacaataaaactagggtttgta 54906671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 18537142 - 18537078
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgt 77  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||| ||||| |||| || |||||    
T  18537142 gagatagtggacaaggccaagagtgccattgtcttgtgcctcgggaataaagttttaagagatgt 18537078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 46146991 - 46146943
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggata 61  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  46146991 gagatggtggacaatgctaggagtgtcattgtcttgtgcctcggtgata 46146943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 22782375 - 22782320
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| | ||||||||||||||||||||||| ||||    
T  22782375 gagatggtggacaaggccaggagtgccgttgtcttgtgcctcggggataaagtttt 22782320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 22802375 - 22802325
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||| |||||    
T  22802375 gagatggtggacaaggccaggagtgccattgtcttgtgcctcgggaataaa 22802325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 36378979 - 36379029
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    ||||||||||||||||  | ||||||||||||||||||||||||| |||||    
T  36378979 gagatggtggacaaggtcaggagtgtcattgtcttgtgcctcgggaataaa 36379029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 12743523 - 12743458
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    |||||||||||||||||||  |||| ||||||| |||||||||| || ||| |||| |||||||||    
T  12743523 gagatggtggacaaggctagaagtgccattgtcgtgtgcctcggtgacaaagttttgagggatgtc 12743458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 7050456 - 7050416
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  7050456 ttgattcaccttgaacaaaacactattaggattgagtctct 7050416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 9022361 - 9022405
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||    
T  9022361 aaaacaagggtttagaagtcaacatcaaaactagggtttgtagag 9022405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 10112926 - 10112970
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||    
T  10112926 aaaacaagggtttagaagccaacacaaaaactagggtttgtagag 10112970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 11853532 - 11853572
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  11853532 ttgattcaccttgaacaaaacactattaggattgagtctct 11853572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 52043658 - 52043614
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||    
T  52043658 aaaacaagggtttagaagccaacatcaaaactaaggtttgtagag 52043614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 55822248 - 55822288
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  55822248 ttgattcaccttgaacaaaacactattaggattgagtctct 55822288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 9863762 - 9863809
Alignment:
Q  108 gaaaaacaagggtttagaagccaacaac-aaaactagagtttgtagag 154  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  9863762 gaaaaacaagggtttagaagccaaaaacaaaaactagggtttgtagag 9863809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 11008206 - 11008151
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| | |||||||||||||||| |||||| ||||    
T  11008206 gagatggtggacaaggccaggagtgccgttgtcttgtgcctcggagataaagtttt 11008151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 12395493 - 12395442
Alignment:
Q  17 tggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||| |  |||| ||||||||||||||||||||||||| ||||    
T  12395493 tggtggacaaggccagaagtgccattgtcttgtgcctcggggataaaatttt 12395442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 12400455 - 12400404
Alignment:
Q  17 tggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||| |  |||| ||||||||||||||||||||||||| ||||    
T  12400455 tggtggacaaggccagaagtgccattgtcttgtgcctcggggataaaatttt 12400404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 14789071 - 14789016
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||  ||||||||||||| ||||    
T  14789071 gagatggtggacaaggccatgagtgccattgtcttgctcctcggggataaagtttt 14789016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 22046353 - 22046298
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | | ||| ||||||||||||||||| ||||||| ||||    
T  22046353 gagatggtggacaaggccaggtgtgccattgtcttgtgcctcgaggataaagtttt 22046298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 36921136 - 36921081
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| || |||||||| ||||||||||||| ||||    
T  36921136 gagatggtggacaaggccaggagtgccactgtcttgtacctcggggataaagtttt 36921081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 9224900 - 9224949
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataa 62  Q
    |||||||| |||||||| ||||||||||||||||| || ||||| |||||    
T  9224900 gagatggtagacaaggcaaagagtgtcattgtcttatgtctcggagataa 9224949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 22801141 - 22801100
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  22801141 aaacaagggtttagaatgacaacaacaaaactagagtttgta 22801100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 29609723 - 29609678
Alignment:
Q  109 aaaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||||||||| |||||||||  |||||||| ||||||||||    
T  29609723 aaaaacaagggtttataagccaacactaaaactagggtttgtagag 29609678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 56030498 - 56030539
Alignment:
Q  111 aaacaagggtttagaa-gccaacaacaaaactagagtttgta 151  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  56030498 aaacaagggtttagaatgacaacaacaaaactagagtttgta 56030539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 4570077 - 4570117
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  4570077 ttgattcaccttgaacaaaacactattaggatcgagtctct 4570117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 4884857 - 4884897
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  4884857 ttgattcaccttgaacaaagcactattaggattgagtctct 4884897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 8529250 - 8529290
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  8529250 ttgattcaccttgaacaaagcactattaggattgagtctct 8529290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 15032815 - 15032775
Alignment:
Q  111 aaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    ||||||||||||||||| |||||| |||||||| |||||||    
T  15032815 aaacaagggtttagaagtcaacaagaaaactagggtttgta 15032775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 15831124 - 15831164
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  15831124 ttgattcaccttgaacaaatcactattaggattgagtctct 15831164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 16186035 - 16185995
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  16186035 ttgattcaccttgaacaaaacactgttaggattgagtctct 16185995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 16489332 - 16489372
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  16489332 ttgattcaccttgaacaaagcactattaggattgagtctct 16489372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 16689139 - 16689099
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  16689139 ttgattcaccttgaacaaagcactattaggattgagtctct 16689099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 18586949 - 18586989
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  18586949 ttgattcaccttgaacaaagcactattaggattgagtctct 18586989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 19322751 - 19322791
Alignment:
Q  111 aaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    ||||||||||||||||| |||||| |||||||| |||||||    
T  19322751 aaacaagggtttagaagtcaacaagaaaactagggtttgta 19322791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 25699732 - 25699772
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  25699732 ttgattcaccttgaacaaagcactattaggattgagtctct 25699772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 26558303 - 26558347
Alignment:
Q  34 agtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    |||| ||||||||||||||||| ||||||| |||| |||||||||    
T  26558303 agtgacattgtcttgtgcctcgaggataaagttttaagggatgtc 26558347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 28453741 - 28453785
Alignment:
Q  110 aaaacaagggtttagaagccaacaacaaaactagagtttgtagag 154  Q
    ||||||||||||||||||||||||  |||||||| ||||| ||||    
T  28453741 aaaacaagggtttagaagccaacactaaaactagggtttgcagag 28453785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 31300407 - 31300447
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  31300407 ttgattcaccttgaacaaagcactattaggattgagtctct 31300447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 36771379 - 36771419
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  36771379 ttgattcaccttgaacaaaacactattatgattgagtctct 36771419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 265 - 320
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||| ||||    
T  265 gagatggtggacaaggccaggagtgccattgtcttgtgcctcggggataaagtttt 320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 80507 - 80557
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaa 63  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||||    
T  80507 gagatggtggacaaggccatgagtgtcattgtcttgtgcctcgggaataaa 80557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 188441 - 188401
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  188441 ttgattcaccttgaacaaaacactattaggattgagtctct 188401  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 115176 - 115241
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttttagggatgtc 78  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| || ||| |||| || ||||||    
T  115176 gagatggtggacaaggctaggagtgccattgtcttgtgcctcggtgacaaagttttgagcgatgtc 115241  T

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Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 12513 - 12458
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| | ||||||||||||||||||||||| ||||    
T  12513 gagatggtggacaaggccaggagtgccgttgtcttgtgcctcggggataaagtttt 12458  T

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Target: scaffold0131 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 31124 - 31164
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  31124 ttgattcaccttgaacaaaacactattaggattgagtctct 31164  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 73152 - 73100
Alignment:
Q  16 atggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||| | ||||| |||||||||||||||||| |||||| ||||    
T  73152 atggtggacaaggccaggagtgccattgtcttgtgcctcggagataaagtttt 73100  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 224802 - 224842
Alignment:
Q  197 ttgattcaccttgaa-aaaacactattaggattgagtctct 236  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  224802 ttgattcaccttgaacaaaacactattaggattgagtctct 224842  T

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Target: scaffold0140 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 22767 - 22822
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    |||||||||||||||||   ||||| | ||||||||||||||||||||||| ||||    
T  22767 gagatggtggacaaggcccggagtgccgttgtcttgtgcctcggggataaagtttt 22822  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 34191 - 34246
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| || ||||||||||||||| |||||| ||||    
T  34191 gagatggtggacaaggcaaggagtgacaatgtcttgtgcctcggagataaagtttt 34246  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 50659 - 50714
Alignment:
Q  13 gagatggtggacaaggctaagagtgtcattgtcttgtgcctcggggataaattttt 68  Q
    ||||||||||||||||| | ||||| ||||||||||  ||||||||||||| ||||    
T  50659 gagatggtggacaaggccatgagtgccattgtcttgctcctcggggataaagtttt 50714  T

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Target: scaffold0468 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 1910 - 1870
Alignment:
Q  111 aaacaagggtttagaagccaacaacaaaactagagtttgta 151  Q
    ||||||||||||||||| |||||| |||||||| |||||||    
T  1910 aaacaagggtttagaagtcaacaagaaaactagggtttgta 1870  T

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Target: scaffold0256 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 16308 - 16348
Alignment:
Q  197 ttgattcaccttgaaaaaa-cactattaggattgagtctct 236  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  16308 ttgattcaccttgaacaaagcactattaggattgagtctct 16348  T

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