View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9778_low_50 (Length: 262)
Name: NF9778_low_50
Description: NF9778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9778_low_50 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 11102794 - 11102572
Alignment:
| Q |
19 |
cacagatacgtacaaagtttggaatgtagaaattaatataaaattattttttattagattacgtgtgacacaaaatatacatgttggtcttatatacttt |
118 |
Q |
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| T |
11102794 |
cacagatacgtacaaagtttggaatgtagaaattaatataaaattattttttattagattacgtgtgacacaaaatataaatgttggtcttatatacttt |
11102695 |
T |
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| Q |
119 |
acagttgacatgaatgggaatgtaaccgtttcagttgtgaataatgccaaatgaaagaatcaacaaaatgctcaaggtaaggaaatgcattgcggtgtaa |
218 |
Q |
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| T |
11102694 |
acagttgacatgaatgggaatgtaaccgtttcagttgtgaataatgccaaatgaaagaatcaacaaaatgctcaaggtaagggaatgcattgcagtgtaa |
11102595 |
T |
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| Q |
219 |
ttacgagcattattttgccgtat |
241 |
Q |
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| T |
11102594 |
ttacgagcattattttgccgtat |
11102572 |
T |
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