View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9779_high_38 (Length: 260)
Name: NF9779_high_38
Description: NF9779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9779_high_38 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 10765255 - 10765484
Alignment:
| Q |
12 |
tgtttaagcgacttaatgtttttggtggagagatgtgttgatatcttgttagtcttggactatcagttcgttattgctctcgacgtttctgatactccgg |
111 |
Q |
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| T |
10765255 |
tgtttaagcgacttaatgtttttggtggagagatgtgttgatatcttgttagtcttggactatcggtttgttattgctctcgacgtt-ctgatactccgg |
10765353 |
T |
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| Q |
112 |
aacatagaggacctaattataattgtgatatttggagaatcaaatggccagatgaaaacagttaggccatagttgtgatacttgaagaactcaactaatg |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10765354 |
aacatagaggacctaattataattgtgatatttggagaatcaaatggccagatgaaaacagttaggccatagttgtgatacttgaagaactcaactaatg |
10765453 |
T |
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| Q |
212 |
caattgataacggagggaccaaacttgtgca |
242 |
Q |
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| T |
10765454 |
caattgataacggagggaccaaacttgtgca |
10765484 |
T |
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