View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9779_low_30 (Length: 352)
Name: NF9779_low_30
Description: NF9779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9779_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 7 - 335
Target Start/End: Complemental strand, 8763881 - 8763552
Alignment:
| Q |
7 |
tttggtgttaatttgaccgaaaagttatttaaaatagactaaaatttctttcattaattctttaaaaatgtggtcaaattttggtcttctatataatatt |
106 |
Q |
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| T |
8763881 |
tttggtgttaatttgaccgaaaagttatttaaaatagactaaaatttctttcattaattctttaaaaatgtggtcaaattttggtcttctatataatatt |
8763782 |
T |
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| Q |
107 |
tttgtgtcatttggatagataatttggatacatatgaatcaagttttaaaaaatataaaattgagaccattaaacaatgtttcattaatatgctaataaa |
206 |
Q |
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| T |
8763781 |
tttgtgtcatttggatagataatttggatacatatgaatcaagtttaaaaaaataaaaaattgagaccattaaacaatgtttcattaatatgctaataaa |
8763682 |
T |
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| Q |
207 |
taaaagacattatttgtgtcattttggcatatgactctattttgataaataatttaaagggaa-aaaattatgtaatttgtagcaatttatttaaaacat |
305 |
Q |
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| T |
8763681 |
tagaagacattatttgtgtcattttggcatatgactctattttgataaataatttaaagggaaaaaaattatgtaatttgtagcaatttatttaaaacat |
8763582 |
T |
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| Q |
306 |
aattatcgttatcattcccaccactttagt |
335 |
Q |
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| T |
8763581 |
aattatcgttatcattcccaccactttagt |
8763552 |
T |
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